|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
124-434 |
3.54e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 94.62 E-value: 3.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 124 SGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVM 203
Cdd:COG4886 16 LLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 204 KNLKVLSLKDNNVTAVPTilppNLLELYLYNNIIKRIqEHDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHD 283
Cdd:COG4886 96 TNLTELDLSGNEELSNLT----NLESLDLSGNQLTDL-PEELANLTNLKELDLSNN--------------------QLTD 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 284 --NAFDSLTELKVLRLHSNSLQHVPAEwFKNMSNLQELDLSQNYLAreiEEAKFLNSLPNLVQLDLSFNyELQvyhasiT 361
Cdd:COG4886 151 lpEPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGN-QLT------D 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 147900684 362 LPHSLSSLTKLKNLYIKGyvfKELKDssLSVLHNLSNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 434
Cdd:COG4886 220 LPEPLANLTNLETLDLSN---NQLTD--LPELGNLTNLEELDLSNN--QLTDLPPLANLTNLKTLDLSNNQLT 285
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
190-734 |
2.35e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 94.14 E-value: 2.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 190 NVSYSIEKDAFLVMKNLKVLSLKDNNVT-AVPTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCpRCYNVPy 268
Cdd:PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV-LVGKIP- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 269 pctpcennsplqihdNAFDSLTELKVLRLHSNSLQ-HVPAEWFKnMSNLQELDLSQNYLAREIeeAKFLNSLPNLVQLDL 347
Cdd:PLN00113 182 ---------------NSLTNLTSLEFLTLASNQLVgQIPRELGQ-MKSLKWIYLGYNNLSGEI--PYEIGGLTSLNHLDL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 348 SFNyelqvyHASITLPHSLSSLTKLKNLYIkgYVFKeLKDSSLSVLHNLSNLEVLDLGTNFI--KIADLNIfqQFENLKF 425
Cdd:PLN00113 244 VYN------NLTGPIPSSLGNLKNLQYLFL--YQNK-LSGPIPPSIFSLQKLISLDLSDNSLsgEIPELVI--QLQNLEI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 426 IDLSVNKISpseesrevGLCPNAQTSVdwhgPQvLEALHYFrydeyarSCRFKNKepptfLPLNADCHTYGKTLDLSRNN 505
Cdd:PLN00113 313 LHLFSNNFT--------GKIPVALTSL----PR-LQVLQLW-------SNKFSGE-----IPKNLGKHNNLTVLDLSTNN 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 506 ------------------IFFIK------PSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYST 561
Cdd:PLN00113 368 ltgeipeglcssgnlfklILFSNslegeiPKSLGACRSLRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQGRINS 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 562 AFEELQNLEILDLSSNShyFQAEgithmLNFTKKLRHLEKLMMNDNDISTSASRTMESES-LRVLEFRGNHLdvlwrDGD 640
Cdd:PLN00113 447 RKWDMPSLQMLSLARNK--FFGG-----LPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSeLMQLKLSENKL-----SGE 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 641 -NRYLDFFKNLLNleeLDISRNSLNSVPPGVFEGMPPnlttlslaknglrsfswgrlqllkhLKNLDLSHNQLT-TVPAR 718
Cdd:PLN00113 515 iPDELSSCKKLVS---LDLSHNQLSGQIPASFSEMPV-------------------------LSQLDLSQNQLSgEIPKN 566
|
570
....*....|....*.
gi 147900684 719 LANCsKSLTKLILNHN 734
Cdd:PLN00113 567 LGNV-ESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
497-763 |
2.72e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.53 E-value: 2.72e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 497 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRldllystAFEELQNLEILDLSS 576
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 577 NShyfqaegITHMLNFTKKLRHLEKLMMNDNDISTsasrtmeseslrvlefrgnhldvlwrdgdnrYLDFFKNLLNLEEL 656
Cdd:COG4886 123 NQ-------LTDLPEELANLTNLKELDLSNNQLTD-------------------------------LPEPLGNLTNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 657 DISRNSLNSVPPgVFEGMPpNLTTLSLAKNGLRSFSWGrLQLLKHLKNLDLSHNQLTTVPARLANCsKSLTKLILNHNQI 736
Cdd:COG4886 165 DLSNNQLTDLPE-ELGNLT-NLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANL-TNLETLDLSNNQL 240
|
250 260
....*....|....*....|....*..
gi 147900684 737 RQLTKyfLEDALQLRYLDISSNKIQVI 763
Cdd:COG4886 241 TDLPE--LGNLTNLEELDLSNNQLTDL 265
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
120-577 |
5.41e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 76.81 E-value: 5.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 120 PGSFSGLSDLKSLYLDGNQLL-EIPQDlpsslqllsleannifsitkenLSELVNIESLYLGQNcyyrnpcNVSYSIEKD 198
Cdd:PLN00113 181 PNSLTNLTSLEFLTLASNQLVgQIPRE----------------------LGQMKSLKWIYLGYN-------NLSGEIPYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 199 aFLVMKNLKVLSLKDNNVTA-VPTILP--PNLLELYLYNNIIK-RIQEHDFNkLSQLQVLDLSGNCpRCYNVPYPCTPCE 274
Cdd:PLN00113 232 -IGGLTSLNHLDLVYNNLTGpIPSSLGnlKNLQYLFLYQNKLSgPIPPSIFS-LQKLISLDLSDNS-LSGEIPELVIQLQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 275 NNSPLQIHDNAFD--------SLTELKVLRLHSNSLQ-HVPAEWFKNmSNLQELDLSQNYLAREIEEAkfLNSLPNLVQL 345
Cdd:PLN00113 309 NLEILHLFSNNFTgkipvaltSLPRLQVLQLWSNKFSgEIPKNLGKH-NNLTVLDLSTNNLTGEIPEG--LCSSGNLFKL 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 346 DL-SFNYELQVyhasitlPHSLSSLTKLKNLyikgyvfkELKDSSLSVlhnlsnlevlDLGTNFIKIADLNifqqfenlk 424
Cdd:PLN00113 386 ILfSNSLEGEI-------PKSLGACRSLRRV--------RLQDNSFSG----------ELPSEFTKLPLVY--------- 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 425 FIDLSVNKISPSEESREvglcpnaqtsvdWHGPQvLEALHYFRYdeyarscRFKNKEPPTFLPLNAdchtygKTLDLSRN 504
Cdd:PLN00113 432 FLDISNNNLQGRINSRK------------WDMPS-LQMLSLARN-------KFFGGLPDSFGSKRL------ENLDLSRN 485
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 147900684 505 NIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSN 577
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
891-1036 |
8.38e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 69.66 E-value: 8.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 891 CYDAFIVYdtknsAVTEWVLQELVVKLEDpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKM 970
Cdd:smart00255 1 EYDVFISY-----SGKEDVRNEFLSHLLE-KLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLD 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 971 AFYLSHQRLMDEKVDVIILIFLEK----PLQKSKFLQLRKRlcsSSVLEWPTNPQAHpyFWqclKNALTT 1036
Cdd:smart00255 75 ELVAALENALEEGGLRVIPIFYEVipsdVRKQPGKFRKVFK---KNYLKWPEDEKEQ--FW---KKALYA 136
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
198-350 |
7.35e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 63.27 E-value: 7.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 198 DAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQehDFNKLSQLQVLDLSGNCPRC----YNvpypctp 272
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIENLEFlTNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVveglEN------- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 273 CENNSPLQIHDN--------AFDSLT------ELKVLRLHSNSLQHVpaEWFKNMSNLQELDLSQNYLaREIEEAK-FLN 337
Cdd:cd21340 89 LTNLEELHIENQrlppgeklTFDPRSlaalsnSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQI-SDLEELLdLLS 165
|
170
....*....|...
gi 147900684 338 SLPNLVQLDLSFN 350
Cdd:cd21340 166 SWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
290-350 |
9.96e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 9.96e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 147900684 290 TELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLaREIEEAKFLNsLPNLVQLDLSFN 350
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSG-LPSLRYLDLSGN 59
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
892-1017 |
2.84e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 57.37 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 892 YDAFIvyDTKNSAVTEWVLQELvvkLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAktESFKMA 971
Cdd:pfam01582 1 YDVFL--SFRGSDTREWFVSHL---LKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYA--SSGWCL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 147900684 972 FYLSH-QRLMDEKVDVIILIFLEK-----PLQKSKFLQLRKRLCS----SSVLEWP 1017
Cdd:pfam01582 74 DELVKiLECALDLGQKVIPIFYEVdpsdvRKQTGSFGKAFKKHKKvlteEKVLKWR 129
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
497-555 |
4.15e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 4.15e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 147900684 497 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIgQTLNGSELQPLRELRYLDFSNNRL 555
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
538-742 |
6.41e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 54.41 E-value: 6.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 538 ELQPLRELRYLDFSNNRLDLLysTAFEELQNLEILDLSSNShyfqaegITHMLNFTKkLRHLEKLMMNDNDIStsasrtm 617
Cdd:cd21340 19 NLSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ-------IEKIENLEN-LVNLKKLYLGGNRIS------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 618 eseslrVLEfrgnHLDvlwrdgdnryldffkNLLNLEELDISRNSLnsvPPGV---FE-----GMPPNLTTLSLAKNGLR 689
Cdd:cd21340 82 ------VVE----GLE---------------NLTNLEELHIENQRL---PPGEkltFDprslaALSNSLRVLNISGNNID 133
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 147900684 690 SFSWgrLQLLKHLKNLDLSHNQLTTVP--ARLANCSKSLTKLILNHNQIRQLTKY 742
Cdd:cd21340 134 SLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCKKPKY 186
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
75-139 |
3.76e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.76e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 147900684 75 NHIPSISPDSFHRLKHLEELDLRCNCVPIllgskanvctkrlqIRPGSFSGLSDLKSLYLDGNQL 139
Cdd:pfam13855 11 NRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
725-768 |
8.98e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 8.98e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 147900684 725 SLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKTSF 768
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAF 45
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
124-434 |
3.54e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 94.62 E-value: 3.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 124 SGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVM 203
Cdd:COG4886 16 LLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 204 KNLKVLSLKDNNVTAVPTilppNLLELYLYNNIIKRIqEHDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHD 283
Cdd:COG4886 96 TNLTELDLSGNEELSNLT----NLESLDLSGNQLTDL-PEELANLTNLKELDLSNN--------------------QLTD 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 284 --NAFDSLTELKVLRLHSNSLQHVPAEwFKNMSNLQELDLSQNYLAreiEEAKFLNSLPNLVQLDLSFNyELQvyhasiT 361
Cdd:COG4886 151 lpEPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGN-QLT------D 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 147900684 362 LPHSLSSLTKLKNLYIKGyvfKELKDssLSVLHNLSNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 434
Cdd:COG4886 220 LPEPLANLTNLETLDLSN---NQLTD--LPELGNLTNLEELDLSNN--QLTDLPPLANLTNLKTLDLSNNQLT 285
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
190-734 |
2.35e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 94.14 E-value: 2.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 190 NVSYSIEKDAFLVMKNLKVLSLKDNNVT-AVPTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCpRCYNVPy 268
Cdd:PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV-LVGKIP- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 269 pctpcennsplqihdNAFDSLTELKVLRLHSNSLQ-HVPAEWFKnMSNLQELDLSQNYLAREIeeAKFLNSLPNLVQLDL 347
Cdd:PLN00113 182 ---------------NSLTNLTSLEFLTLASNQLVgQIPRELGQ-MKSLKWIYLGYNNLSGEI--PYEIGGLTSLNHLDL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 348 SFNyelqvyHASITLPHSLSSLTKLKNLYIkgYVFKeLKDSSLSVLHNLSNLEVLDLGTNFI--KIADLNIfqQFENLKF 425
Cdd:PLN00113 244 VYN------NLTGPIPSSLGNLKNLQYLFL--YQNK-LSGPIPPSIFSLQKLISLDLSDNSLsgEIPELVI--QLQNLEI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 426 IDLSVNKISpseesrevGLCPNAQTSVdwhgPQvLEALHYFrydeyarSCRFKNKepptfLPLNADCHTYGKTLDLSRNN 505
Cdd:PLN00113 313 LHLFSNNFT--------GKIPVALTSL----PR-LQVLQLW-------SNKFSGE-----IPKNLGKHNNLTVLDLSTNN 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 506 ------------------IFFIK------PSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYST 561
Cdd:PLN00113 368 ltgeipeglcssgnlfklILFSNslegeiPKSLGACRSLRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQGRINS 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 562 AFEELQNLEILDLSSNShyFQAEgithmLNFTKKLRHLEKLMMNDNDISTSASRTMESES-LRVLEFRGNHLdvlwrDGD 640
Cdd:PLN00113 447 RKWDMPSLQMLSLARNK--FFGG-----LPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSeLMQLKLSENKL-----SGE 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 641 -NRYLDFFKNLLNleeLDISRNSLNSVPPGVFEGMPPnlttlslaknglrsfswgrlqllkhLKNLDLSHNQLT-TVPAR 718
Cdd:PLN00113 515 iPDELSSCKKLVS---LDLSHNQLSGQIPASFSEMPV-------------------------LSQLDLSQNQLSgEIPKN 566
|
570
....*....|....*.
gi 147900684 719 LANCsKSLTKLILNHN 734
Cdd:PLN00113 567 LGNV-ESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
497-763 |
2.72e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.53 E-value: 2.72e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 497 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRldllystAFEELQNLEILDLSS 576
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 577 NShyfqaegITHMLNFTKKLRHLEKLMMNDNDISTsasrtmeseslrvlefrgnhldvlwrdgdnrYLDFFKNLLNLEEL 656
Cdd:COG4886 123 NQ-------LTDLPEELANLTNLKELDLSNNQLTD-------------------------------LPEPLGNLTNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 657 DISRNSLNSVPPgVFEGMPpNLTTLSLAKNGLRSFSWGrLQLLKHLKNLDLSHNQLTTVPARLANCsKSLTKLILNHNQI 736
Cdd:COG4886 165 DLSNNQLTDLPE-ELGNLT-NLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANL-TNLETLDLSNNQL 240
|
250 260
....*....|....*....|....*..
gi 147900684 737 RQLTKyfLEDALQLRYLDISSNKIQVI 763
Cdd:COG4886 241 TDLPE--LGNLTNLEELDLSNNQLTDL 265
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
497-842 |
2.04e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 89.22 E-value: 2.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 497 KTLDLSRNNIFFikpsdfkHLSFLKCLNLSGNAIGQTlnGSELQPLRELRYLDFSNNRLDLLySTAFEELQNLEILDLSS 576
Cdd:COG4886 99 TELDLSGNEELS-------NLTNLESLDLSGNQLTDL--PEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSN 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 577 NshyfqaeGITHMLNFTKKLRHLEKLMMNDNDISTSASRTMESESLRVLEFRGNHLDVLwrdgdnryLDFFKNLLNLEEL 656
Cdd:COG4886 169 N-------QLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDL--------PEPLANLTNLETL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 657 DISRNSLNSVPpgVFEGMPpNLTTLSLAKNGLRSFSwgRLQLLKHLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 736
Cdd:COG4886 234 DLSNNQLTDLP--ELGNLT-NLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 737 RQLTKYFLEDALQLRYLDISSNKIQVIQKTSFPENVLNNLNMLLLHHNRFLCNCDAVWFVWWVNHTDVTIPYLATDVTCA 816
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
|
330 340
....*....|....*....|....*.
gi 147900684 817 GPGAHKGQSVISLDLYTCELDLTNLI 842
Cdd:COG4886 389 LLLLLLTTTAGVLLLTLALLDAVNTE 414
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
81-444 |
2.05e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 83.06 E-value: 2.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 81 SPDSFHRLKHLEELDLRCNcvpillgskanvctkRLQIRPGSFSGLSDLKSLYLDGNQLLEIPqdlpsslqllsleanni 160
Cdd:COG4886 105 GNEELSNLTNLESLDLSGN---------------QLTDLPEELANLTNLKELDLSNNQLTDLP----------------- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 161 fsitkENLSELVNIESLYLGQNcyyrnpcnvsySIEK--DAFLVMKNLKVLSLKDNNVTAVPTIL--PPNLLELYLYNNI 236
Cdd:COG4886 153 -----EPLGNLTNLKSLDLSNN-----------QLTDlpEELGNLTNLKELDLSNNQITDLPEPLgnLTNLEELDLSGNQ 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 237 IKRIQEhDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHD-NAFDSLTELKVLRLHSNSLQHVPAEwfKNMSN 315
Cdd:COG4886 217 LTDLPE-PLANLTNLETLDLSNN--------------------QLTDlPELGNLTNLEELDLSNNQLTDLPPL--ANLTN 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 316 LQELDLSQNYLAR-EIEEAKFLNSLPNLVQLDLSFNYELQVYHASITLPHSLSSLTKLKNLYIKGYVFKELKDSSLSVLH 394
Cdd:COG4886 274 LKTLDLSNNQLTDlKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 147900684 395 NLSNLEVLDLGTNFIKIADLNIFQQFENLKFIDLSVNKISPSEESREVGL 444
Cdd:COG4886 354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLL 403
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
156-434 |
2.54e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 2.54e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 156 EANNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVMKNLKVLSLKDNNVTAVPTILPPNLLELYLYNN 235
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 236 IIKRIQEHDFNKLSQLQVLDLSGNCPRcynvpypcTPCENNSPLQIHDN-------AFDSLTELKVLRLHSNSLQHVPAE 308
Cdd:COG4886 83 SLLLLGLTDLGDLTNLTELDLSGNEEL--------SNLTNLESLDLSGNqltdlpeELANLTNLKELDLSNNQLTDLPEP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 309 wFKNMSNLQELDLSQNYLaREIEEAkfLNSLPNLVQLDLSFNyelqvyhaSIT-LPHSLSSLTKLKNLYIKGYVFKELKD 387
Cdd:COG4886 155 -LGNLTNLKSLDLSNNQL-TDLPEE--LGNLTNLKELDLSNN--------QITdLPEPLGNLTNLEELDLSGNQLTDLPE 222
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 147900684 388 SslsvLHNLSNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 434
Cdd:COG4886 223 P----LANLTNLETLDLSNN--QLTDLPELGNLTNLEELDLSNNQLT 263
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
120-577 |
5.41e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 76.81 E-value: 5.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 120 PGSFSGLSDLKSLYLDGNQLL-EIPQDlpsslqllsleannifsitkenLSELVNIESLYLGQNcyyrnpcNVSYSIEKD 198
Cdd:PLN00113 181 PNSLTNLTSLEFLTLASNQLVgQIPRE----------------------LGQMKSLKWIYLGYN-------NLSGEIPYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 199 aFLVMKNLKVLSLKDNNVTA-VPTILP--PNLLELYLYNNIIK-RIQEHDFNkLSQLQVLDLSGNCpRCYNVPYPCTPCE 274
Cdd:PLN00113 232 -IGGLTSLNHLDLVYNNLTGpIPSSLGnlKNLQYLFLYQNKLSgPIPPSIFS-LQKLISLDLSDNS-LSGEIPELVIQLQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 275 NNSPLQIHDNAFD--------SLTELKVLRLHSNSLQ-HVPAEWFKNmSNLQELDLSQNYLAREIEEAkfLNSLPNLVQL 345
Cdd:PLN00113 309 NLEILHLFSNNFTgkipvaltSLPRLQVLQLWSNKFSgEIPKNLGKH-NNLTVLDLSTNNLTGEIPEG--LCSSGNLFKL 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 346 DL-SFNYELQVyhasitlPHSLSSLTKLKNLyikgyvfkELKDSSLSVlhnlsnlevlDLGTNFIKIADLNifqqfenlk 424
Cdd:PLN00113 386 ILfSNSLEGEI-------PKSLGACRSLRRV--------RLQDNSFSG----------ELPSEFTKLPLVY--------- 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 425 FIDLSVNKISPSEESREvglcpnaqtsvdWHGPQvLEALHYFRYdeyarscRFKNKEPPTFLPLNAdchtygKTLDLSRN 504
Cdd:PLN00113 432 FLDISNNNLQGRINSRK------------WDMPS-LQMLSLARN-------KFFGGLPDSFGSKRL------ENLDLSRN 485
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 147900684 505 NIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSN 577
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
891-1036 |
8.38e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 69.66 E-value: 8.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 891 CYDAFIVYdtknsAVTEWVLQELVVKLEDpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKM 970
Cdd:smart00255 1 EYDVFISY-----SGKEDVRNEFLSHLLE-KLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLD 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 971 AFYLSHQRLMDEKVDVIILIFLEK----PLQKSKFLQLRKRlcsSSVLEWPTNPQAHpyFWqclKNALTT 1036
Cdd:smart00255 75 ELVAALENALEEGGLRVIPIFYEVipsdVRKQPGKFRKVFK---KNYLKWPEDEKEQ--FW---KKALYA 136
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
275-750 |
2.66e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 69.96 E-value: 2.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 275 NNSPLQIHDNAFDSLTELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLAREIEEAKFLNSLPNLVQLDLSFNYELQ 354
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 355 VYHASITLPHSLSSLTKLKNLYIkgyvfkelkdSSLSVLHNLSNLEVLDLGTNFIKiadlNIFQQFENLKFIdlsvnkis 434
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDL----------SGNEELSNLTNLESLDLSGNQLT----DLPEELANLTNL-------- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 435 pseesrevglcpnaqtsvdwhgpqvlealhyfrydeyarscrfknkepptflplnadchtygKTLDLSRNNIFFIkPSDF 514
Cdd:COG4886 139 --------------------------------------------------------------KELDLSNNQLTDL-PEPL 155
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 515 KHLSFLKCLNLSGNAIgQTLnGSELQPLRELRYLDFSNNRLDLLySTAFEELQNLEILDLSSNshyfqaeGITHMLNFTK 594
Cdd:COG4886 156 GNLTNLKSLDLSNNQL-TDL-PEELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN-------QLTDLPEPLA 225
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 595 KLRHLEKLMMNDNDISTsasrtmeseslrvlefrgnhldvlwrdgdnryLDFFKNLLNLEELDISRNSLNSVPPgvfEGM 674
Cdd:COG4886 226 NLTNLETLDLSNNQLTD--------------------------------LPELGNLTNLEELDLSNNQLTDLPP---LAN 270
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 147900684 675 PPNLTTLSLAKNGLRSFSWGRLQLLKHLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDALQL 750
Cdd:COG4886 271 LTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSL 346
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
198-350 |
7.35e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 63.27 E-value: 7.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 198 DAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQehDFNKLSQLQVLDLSGNCPRC----YNvpypctp 272
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIENLEFlTNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVveglEN------- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 273 CENNSPLQIHDN--------AFDSLT------ELKVLRLHSNSLQHVpaEWFKNMSNLQELDLSQNYLaREIEEAK-FLN 337
Cdd:cd21340 89 LTNLEELHIENQrlppgeklTFDPRSlaalsnSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQI-SDLEELLdLLS 165
|
170
....*....|...
gi 147900684 338 SLPNLVQLDLSFN 350
Cdd:cd21340 166 SWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
290-350 |
9.96e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 9.96e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 147900684 290 TELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLaREIEEAKFLNsLPNLVQLDLSFN 350
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSG-LPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
203-379 |
1.60e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 59.03 E-value: 1.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 203 MKNLKVLSLKDNNVTAVPTI-LPPNLLELYLYNNIIKRIQehDFNKLSQLQVLDLSGNCprcynvpypCTPCENnsplqi 281
Cdd:cd21340 1 LKRITHLYLNDKNITKIDNLsLCKNLKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQ---------IEKIEN------ 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 282 hdnaFDSLTELKVLRLHSNSLQHVpaEWFKNMSNLQELDLSQNYLARE--------------------------IEEAKF 335
Cdd:cd21340 64 ----LENLVNLKKLYLGGNRISVV--EGLENLTNLEELHIENQRLPPGekltfdprslaalsnslrvlnisgnnIDSLEP 137
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 147900684 336 LNSLPNLVQLDLSFNyELQVYHAsitLPHSLSSLTKLKNLYIKG 379
Cdd:cd21340 138 LAPLRNLEQLDASNN-QISDLEE---LLDLLSSWPSLRELDLTG 177
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
892-1017 |
2.84e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 57.37 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 892 YDAFIvyDTKNSAVTEWVLQELvvkLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAktESFKMA 971
Cdd:pfam01582 1 YDVFL--SFRGSDTREWFVSHL---LKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYA--SSGWCL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 147900684 972 FYLSH-QRLMDEKVDVIILIFLEK-----PLQKSKFLQLRKRLCS----SSVLEWP 1017
Cdd:pfam01582 74 DELVKiLECALDLGQKVIPIFYEVdpsdvRKQTGSFGKAFKKHKKvlteEKVLKWR 129
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
104-367 |
3.37e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 57.78 E-value: 3.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 104 LLGSKANVCTKRLQIRPGSFSGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSItKENLSElvNIESLYLGQNC 183
Cdd:PRK15370 176 LKNNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSI-PATLPD--TIQEMELSINR 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 184 YYRNPCNVSYSiekdaflvmknLKVLSLKDNNVTAVPTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCprc 263
Cdd:PRK15370 253 ITELPERLPSA-----------LQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA--- 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 264 ynvpYPCTPCENNSPLQIHDNAFDSL-----TELKVLRLHSNSLQHVPAEWfknMSNLQELDLSQNYLAREIEeakflnS 338
Cdd:PRK15370 319 ----LPETLPPGLKTLEAGENALTSLpaslpPELQVLDVSKNQITVLPETL---PPTITTLDVSRNALTNLPE------N 385
|
250 260 270
....*....|....*....|....*....|
gi 147900684 339 LPNLVQ-LDLSFNyelQVYHASITLPHSLS 367
Cdd:PRK15370 386 LPAALQiMQASRN---NLVRLPESLPHFRG 412
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
497-555 |
4.15e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 4.15e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 147900684 497 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIgQTLNGSELQPLRELRYLDFSNNRL 555
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
538-742 |
6.41e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 54.41 E-value: 6.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 538 ELQPLRELRYLDFSNNRLDLLysTAFEELQNLEILDLSSNShyfqaegITHMLNFTKkLRHLEKLMMNDNDIStsasrtm 617
Cdd:cd21340 19 NLSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ-------IEKIENLEN-LVNLKKLYLGGNRIS------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 618 eseslrVLEfrgnHLDvlwrdgdnryldffkNLLNLEELDISRNSLnsvPPGV---FE-----GMPPNLTTLSLAKNGLR 689
Cdd:cd21340 82 ------VVE----GLE---------------NLTNLEELHIENQRL---PPGEkltFDprslaALSNSLRVLNISGNNID 133
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 147900684 690 SFSWgrLQLLKHLKNLDLSHNQLTTVP--ARLANCSKSLTKLILNHNQIRQLTKY 742
Cdd:cd21340 134 SLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCKKPKY 186
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
642-760 |
7.38e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 56.63 E-value: 7.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 642 RYLDFFKNLL---------NLEELDISRNSLNSVPpgvfEGMPPNLTTLSLAKNGLRSFSwgrLQLLKHLKNLDLSHNQL 712
Cdd:PRK15370 286 RYLSVYDNSIrtlpahlpsGITHLNVQSNSLTALP----ETLPPGLKTLEAGENALTSLP---ASLPPELQVLDVSKNQI 358
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 147900684 713 TTVPARLancSKSLTKLILNHNQIRQLTKYfLEDALQlrYLDISSNKI 760
Cdd:PRK15370 359 TVLPETL---PPTITTLDVSRNALTNLPEN-LPAALQ--IMQASRNNL 400
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
676-736 |
1.51e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.06 E-value: 1.51e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 147900684 676 PNLTTLSLAKNGLRSFSWGRLQLLKHLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 736
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
514-760 |
1.68e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 54.28 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 514 FKHLSFLKCLNLSGNAIGQT---LNGSELQPLRELRYLDFSNNRL-DLLYST-----AFEELQNLEILDLSSNShyFQAE 584
Cdd:cd00116 19 LPKLLCLQVLRLEGNTLGEEaakALASALRPQPSLKELCLSLNETgRIPRGLqsllqGLTKGCGLQELDLSDNA--LGPD 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 585 GITHMLNFTKKLRhLEKLMMNDNDISTSASR------TMESESLRVLEFRGNHLDVlwrDGDNRYLDFFKNLLNLEELDI 658
Cdd:cd00116 97 GCGVLESLLRSSS-LQELKLNNNGLGDRGLRllakglKDLPPALEKLVLGRNRLEG---ASCEALAKALRANRDLKELNL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 659 SRNSLNsvPPGV---FEGMP--PNLTTLSLAKNGLR----SFSWGRLQLLKHLKNLDLSHNQLTTVPAR-----LANCSK 724
Cdd:cd00116 173 ANNGIG--DAGIralAEGLKanCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLTDAGAAalasaLLSPNI 250
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 147900684 725 SLTKLILNHNQIRQLT----KYFLEDALQLRYLDISSNKI 760
Cdd:cd00116 251 SLLTLSLSCNDITDDGakdlAEVLAEKESLLELDLRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
75-139 |
3.76e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.76e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 147900684 75 NHIPSISPDSFHRLKHLEELDLRCNCVPIllgskanvctkrlqIRPGSFSGLSDLKSLYLDGNQL 139
Cdd:pfam13855 11 NRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
275-326 |
5.73e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 5.73e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 147900684 275 NNSPLQIHDNAFDSLTELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYL 326
Cdd:pfam13855 10 NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
127-350 |
7.82e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.16 E-value: 7.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 127 SDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLSELvniESLYLGQNCYYRNPCNVSysiekdaflvmKNL 206
Cdd:PRK15370 220 GNIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSAL---QSLDLFHNKISCLPENLP-----------EEL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 207 KVLSLKDNNVTAVPTILPPNLLELYLYNNIIK----------RIQEHDFNKLS--------QLQVLDLSGNcpRCYNVPY 268
Cdd:PRK15370 286 RYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTalpetlppglKTLEAGENALTslpaslppELQVLDVSKN--QITVLPE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 269 PCTPcennsplqihdnafdSLTELKVLRlhsNSLQHVPaewfKNM-SNLQELDLSQNYLAREIEE-AKFLNSLPNLVQLD 346
Cdd:PRK15370 364 TLPP---------------TITTLDVSR---NALTNLP----ENLpAALQIMQASRNNLVRLPESlPHFRGEGPQPTRII 421
|
....
gi 147900684 347 LSFN 350
Cdd:PRK15370 422 VEYN 425
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
895-993 |
1.67e-06 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 48.08 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 895 FIVYDTKNSAVTEWVLQELvvkledpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKMAFYL 974
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90
....*....|....*....
gi 147900684 975 SHQRLMDEKvdVIILIFLE 993
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLE 91
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
498-749 |
1.75e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 51.71 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 498 TLDLSRNNIFFIKPSDF-KHLSF---LKCLNLSGNAIGqtLNGSE-----LQPLRELRYLDFSNNRLD----LLYSTAFE 564
Cdd:COG5238 184 TVYLGCNQIGDEGIEELaEALTQnttVTTLWLKRNPIG--DEGAEilaeaLKGNKSLTTLDLSNNQIGdegvIALAEALK 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 565 ELQNLEILDLSSNshYFQAEGITHMLNFTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFRGNHLDVlwrDG 639
Cdd:COG5238 262 NNTTVETLYLSGN--QIGAEGAIALAKALQGNTTLTSLDLSVNRIGDEGAIALaeglqGNKTLHTLNLAYNGIGA---QG 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 640 DNRYLDFFKNLLNLEELDISRNSLNSvppgvfEGM---------PPNLTTLSLAKNGLRSFswGRLQLLKHLKnldlsHN 710
Cdd:COG5238 337 AIALAKALQENTTLHSLDLSDNQIGD------EGAialakylegNTTLRELNLGKNNIGKQ--GAEALIDALQ-----TN 403
|
250 260 270
....*....|....*....|....*....|....*....
gi 147900684 711 QLTTvparlancsksltkLILNHNQIRQLTKYFLEDALQ 749
Cdd:COG5238 404 RLHT--------------LILDGNLIGAEAQQRLEQLLE 428
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
520-760 |
2.17e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 51.33 E-value: 2.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 520 LKCLNLSGNAIGQtlngselQPLRELRYLDFSNNRLDLLYstafeeLQNLEILDLssnshyfQAEGITHMLNFTKKLRHL 599
Cdd:COG5238 182 VETVYLGCNQIGD-------EGIEELAEALTQNTTVTTLW------LKRNPIGDE-------GAEILAEALKGNKSLTTL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 600 EklmMNDNDISTS-----ASRTMESESLRVLEFRGNHLDVlwrDGDNRYLDFFKNLLNLEELDISRNSLNSvpPGVF--- 671
Cdd:COG5238 242 D---LSNNQIGDEgvialAEALKNNTTVETLYLSGNQIGA---EGAIALAKALQGNTTLTSLDLSVNRIGD--EGAIala 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 672 EGMPPN--LTTLSLAKNGLRSFSWGRL----QLLKHLKNLDLSHNQLT----TVPARLANCSKSLTKLILNHNQIRQLTK 741
Cdd:COG5238 314 EGLQGNktLHTLNLAYNGIGAQGAIALakalQENTTLHSLDLSDNQIGdegaIALAKYLEGNTTLRELNLGKNNIGKQGA 393
|
250 260
....*....|....*....|..
gi 147900684 742 YFLEDALQ---LRYLDISSNKI 760
Cdd:COG5238 394 EALIDALQtnrLHTLILDGNLI 415
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
75-259 |
2.21e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 51.47 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 75 NHIPSIsPDSFHRLKHLEELDLRCNCVPILlgskanvctkrlqirPGSFSGLSDLKSLYLDGNQLLEIPqdlpsslqlls 154
Cdd:COG4886 169 NQLTDL-PEELGNLTNLKELDLSNNQITDL---------------PEPLGNLTNLEELDLSGNQLTDLP----------- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 155 leannifsitkENLSELVNIESLYLGQNcyyrnpcNVSysiEKDAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLY 233
Cdd:COG4886 222 -----------EPLANLTNLETLDLSNN-------QLT---DLPELGNLTNLEELDLSNNQLTDLPPLANlTNLKTLDLS 280
|
170 180
....*....|....*....|....*.
gi 147900684 234 NNIIKRIQEHDFNKLSQLQVLDLSGN 259
Cdd:COG4886 281 NNQLTDLKLKELELLLGLNSLLLLLL 306
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
53-259 |
3.06e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 51.24 E-value: 3.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 53 DKHLTEIPEGIPTNTTNLTLTINHIPSIsPDsfHRLKHLEELDLRCNCVPILlgskanvctkrlqirPGSFSglSDLKSL 132
Cdd:PRK15370 229 SNQLTSIPATLPDTIQEMELSINRITEL-PE--RLPSALQSLDLFHNKISCL---------------PENLP--EELRYL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 133 YLDGNQLLEIPQDLPSSLQLLSLEaNNIFSITKENLSelVNIESLYLGQNCYYRNPCNVSysiekdaflvmKNLKVLSLK 212
Cdd:PRK15370 289 SVYDNSIRTLPAHLPSGITHLNVQ-SNSLTALPETLP--PGLKTLEAGENALTSLPASLP-----------PELQVLDVS 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 147900684 213 DNNVTAVPTILPPNLLELYLYNNIIKRIQEhdfNKLSQLQVLDLSGN 259
Cdd:PRK15370 355 KNQITVLPETLPPTITTLDVSRNALTNLPE---NLPAALQIMQASRN 398
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
621-688 |
3.07e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.59 E-value: 3.07e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 147900684 621 SLRVLEFRGNHLDVLwRDGdnryldFFKNLLNLEELDISRNSLNSVPPGVFEGMpPNLTTLSLAKNGL 688
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-DDG------AFKGLSNLKVLDLSNNLLTTLSPGAFSGL-PSLRYLDLSGNRL 61
|
|
| LRR_12 |
pfam18837 |
Leucine-rich repeat; This Pfam entry includes some LRRs that fail to be detected with the ... |
399-428 |
3.87e-06 |
|
Leucine-rich repeat; This Pfam entry includes some LRRs that fail to be detected with the pfam00560 model. This entry represents one repeat unit.
Pssm-ID: 408607 Cd Length: 30 Bit Score: 44.26 E-value: 3.87e-06
10 20 30
....*....|....*....|....*....|
gi 147900684 399 LEVLDLGTNFIKIADLNIFQQFENLKFIDL 428
Cdd:pfam18837 1 LQTLHLQMNFINQAQLSIFGAFPGLRFVDL 30
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
498-758 |
5.72e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 49.66 E-value: 5.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 498 TLDLSRNNIFFIKP---SDFKHLSFLKCLNLSGNAIGQT---LNGSELQPLRE-LRYLDFSNNRL------DLlySTAFE 564
Cdd:cd00116 85 ELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLGDRglrLLAKGLKDLPPaLEKLVLGRNRLegasceAL--AKALR 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 565 ELQNLEILDLSSNShyFQAEGITHMLNFTKKLRHLEKLMMNDNDIStsasrtmeseslrvlefrgnhldvlwRDGDNRYL 644
Cdd:cd00116 163 ANRDLKELNLANNG--IGDAGIRALAEGLKANCNLEVLDLNNNGLT--------------------------DEGASALA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 645 DFFKNLLNLEELDISRNSLNSVppgvfegmppnlttlslaknGLRSFSWGRLQLLKHLKNLDLSHNQLTTVPAR-----L 719
Cdd:cd00116 215 ETLASLKSLEVLNLGDNNLTDA--------------------GAAALASALLSPNISLLTLSLSCNDITDDGAKdlaevL 274
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 147900684 720 ANcSKSLTKLILNHNQIRQLTKYFLEDAL-----QLRYLDISSN 758
Cdd:cd00116 275 AE-KESLLELDLRGNKFGEEGAQLLAESLlepgnELESLWVKDD 317
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
497-739 |
1.70e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.08 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 497 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRLDLLYSTAFeeLQNLEILDLSS 576
Cdd:PLN00113 72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS--IPNLETLDLSN 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 577 N---SHYFQAEG---------------ITHMLNFTKKLRHLEKLMMNDNDISTSASR---TMESESLRVLEFRG------ 629
Cdd:PLN00113 150 NmlsGEIPNDIGsfsslkvldlggnvlVGKIPNSLTNLTSLEFLTLASNQLVGQIPRelgQMKSLKWIYLGYNNlsgeip 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 630 ---------NHLDVLWRDGDNRYLDFFKNLLNLEELDISRNSLN-SVPPGVFEgmPPNLTTLSLAKNglrSFSWGRLQLL 699
Cdd:PLN00113 230 yeiggltslNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFS--LQKLISLDLSDN---SLSGEIPELV 304
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 147900684 700 KHLKNLDLSH---NQLT-TVPARLAncskSLTKLilnhnQIRQL 739
Cdd:PLN00113 305 IQLQNLEILHlfsNNFTgKIPVALT----SLPRL-----QVLQL 339
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
205-259 |
1.87e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.28 E-value: 1.87e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 147900684 205 NLKVLSLKDNNVTAVPTIL---PPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGN 259
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAfkgLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
567-760 |
2.53e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 47.86 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 567 QNLEILDLSSNshYFQAEGITHMLNFTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFRGNHLdvlwrdGDN 641
Cdd:COG5238 180 NSVETVYLGCN--QIGDEGIEELAEALTQNTTVTTLWLKRNPIGDEGAEILaealkGNKSLTTLDLSNNQI------GDE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 642 RYLDFFKNLLN---LEELDISRNSLNSvppgvfEGMppnlttLSLAKNglrsfswgrLQLLKHLKNLDLSHNQLTTVPAR 718
Cdd:COG5238 252 GVIALAEALKNnttVETLYLSGNQIGA------EGA------IALAKA---------LQGNTTLTSLDLSVNRIGDEGAI 310
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 147900684 719 -LANC---SKSLTKLILNHNQIRQLTKYFLEDALQ----LRYLDISSNKI 760
Cdd:COG5238 311 aLAEGlqgNKTLHTLNLAYNGIGAQGAIALAKALQenttLHSLDLSDNQI 360
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
701-760 |
6.18e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.74 E-value: 6.18e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 701 HLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKI 760
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
605-763 |
2.10e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 44.92 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 605 NDNDISTSASRTMESESLRVLEFRGNHLDVLWRDGDNRYLDFFKNLLNLEELDISRNSLNSVPPGVFEGMPPNLTTLSLA 684
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 685 KNGLRSFSWGRLQLLKHLKNL-----------------DLSHNQLTTVPARLANCsKSLTKLILNHNQIRQLTKyFLEDA 747
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELdlsgneelsnltnleslDLSGNQLTDLPEELANL-TNLKELDLSNNQLTDLPE-PLGNL 158
|
170
....*....|....*.
gi 147900684 748 LQLRYLDISSNKIQVI 763
Cdd:COG4886 159 TNLKSLDLSNNQLTDL 174
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
676-765 |
3.78e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 43.24 E-value: 3.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 676 PNLTTLSLAKNGLRSFSwgRLQLLKHLKNLDLSHNQLTTV----------------------------PARLANCSKSLT 727
Cdd:cd21340 46 TNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVVeglenltnleelhienqrlppgekltfdPRSLAALSNSLR 123
|
90 100 110
....*....|....*....|....*....|....*...
gi 147900684 728 KLILNHNQIRQLTkyFLEDALQLRYLDISSNKIQVIQK 765
Cdd:cd21340 124 VLNISGNNIDSLE--PLAPLRNLEQLDASNNQISDLEE 159
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
225-302 |
4.04e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.43 E-value: 4.04e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 147900684 225 PNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCPRCynvpypctpcennsplqIHDNAFDSLTELKVLRLHSNSL 302
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT-----------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
205-454 |
4.83e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 43.50 E-value: 4.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 205 NLKVLSLKDNNVT-----AVPTILPPN--LLELYLYNNIIKRIQE------HDFNKLSQLQVLDLSgncpRCYNVPYPCT 271
Cdd:cd00116 24 CLQVLRLEGNTLGeeaakALASALRPQpsLKELCLSLNETGRIPRglqsllQGLTKGCGLQELDLS----DNALGPDGCG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 272 PCEnnsplqihdnAFDSLTELKVLRLHSNSL-----QHVPAEWFKNMSNLQELDLSQNYLAREIEE--AKFLNSLPNLVQ 344
Cdd:cd00116 100 VLE----------SLLRSSSLQELKLNNNGLgdrglRLLAKGLKDLPPALEKLVLGRNRLEGASCEalAKALRANRDLKE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 345 LDLSFNyelQVYHASI-TLPHSLSSLTKLKNLYIKGYVFKELKDSSLS-VLHNLSNLEVLDLGTNFIKIADLNIF----- 417
Cdd:cd00116 170 LNLANN---GIGDAGIrALAEGLKANCNLEVLDLNNNGLTDEGASALAeTLASLKSLEVLNLGDNNLTDAGAAALasall 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 147900684 418 ----------------------------QQFENLKFIDLSVNKIS--PSEESREVGLCPNAQTSVDW 454
Cdd:cd00116 247 spnislltlslscnditddgakdlaevlAEKESLLELDLRGNKFGeeGAQLLAESLLEPGNELESLW 313
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
360-577 |
6.14e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.47 E-value: 6.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 360 ITLPHSLSSLTKLKNLYikgyvfkeLKD---SSLSVLHNLSNLEVLDLGTNFI-KIADLNifqQFENLKFIDLSVNKISP 435
Cdd:cd21340 14 ITKIDNLSLCKNLKVLY--------LYDnkiTKIENLEFLTNLTHLYLQNNQIeKIENLE---NLVNLKKLYLGGNRISV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 436 SEesrevGLcpnaqtsvdwHGPQVLEALHYfrydEYARscrfknkepptfLPLnadchtyGKTLDLSRNNIFFIKPSdfk 515
Cdd:cd21340 83 VE-----GL----------ENLTNLEELHI----ENQR------------LPP-------GEKLTFDPRSLAALSNS--- 121
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 147900684 516 hlsfLKCLNLSGNAIgQTLngSELQPLRELRYLDFSNNRLDLL--YSTAFEELQNLEILDLSSN 577
Cdd:cd21340 122 ----LRVLNISGNNI-DSL--EPLAPLRNLEQLDASNNQISDLeeLLDLLSSWPSLRELDLTGN 178
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
123-259 |
6.31e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.47 E-value: 6.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 123 FSGLSDLKSLYLDGNQLLEIpqdlpsslqllsleannifsitkENLSELVNIESLYLGQNC------------------- 183
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKI-----------------------ENLENLVNLKKLYLGGNRisvveglenltnleelhie 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 184 YYRNPCNVSYSIEKDA-FLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQE--HDFNKLSQLQVLDLSGN 259
Cdd:cd21340 99 NQRLPPGEKLTFDPRSlAALSNSLRVLNISGNNIDSLEPLAPlRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
269-379 |
1.73e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 42.11 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147900684 269 PCTPCENnsPLQIHDNAFDSLTE---LKVLRLHSNSLQ-HVPAEWFKnMSNLQELDLSQNYLAREIEEAkfLNSLPNLVQ 344
Cdd:PLN03150 396 PCVPQQH--PWSGADCQFDSTKGkwfIDGLGLDNQGLRgFIPNDISK-LRHLQSINLSGNSIRGNIPPS--LGSITSLEV 470
|
90 100 110
....*....|....*....|....*....|....*
gi 147900684 345 LDLSFNYelqvYHASItlPHSLSSLTKLKNLYIKG 379
Cdd:PLN03150 471 LDLSYNS----FNGSI--PESLGQLTSLRILNLNG 499
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
511-578 |
7.40e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.18 E-value: 7.40e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 147900684 511 PSDFKHLSFLKCLNLSGNAIGQTLNGSeLQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNS 578
Cdd:PLN03150 435 PNDISKLRHLQSINLSGNSIRGNIPPS-LGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
543-609 |
7.45e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 7.45e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 147900684 543 RELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNShyfqaegITHMLNFT-KKLRHLEKLMMNDNDI 609
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNL-------LTTLSPGAfSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
725-768 |
8.98e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 8.98e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 147900684 725 SLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKTSF 768
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAF 45
|
|
| |
