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Conserved domains on  [gi|240255445|ref|NP_001074770|]
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olfactory receptor 455, pseudogene 1 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
34-305 2.66e-113

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15225:

Pssm-ID: 475119  Cd Length: 277  Bit Score: 329.03  E-value: 2.66e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15225    9 LIYLVTLLGNLLIILITKVDPAlHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDK----TISFLGCATQMFFFLFLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15225   85 GTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15225  165 CADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSP 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15225  245 ETDKLLSLFYTVVTPMLNPIIYSLRNKEVKGAL 277
 
Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
34-305 2.66e-113

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 329.03  E-value: 2.66e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15225    9 LIYLVTLLGNLLIILITKVDPAlHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDK----TISFLGCATQMFFFLFLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15225   85 GTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15225  165 CADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSP 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15225  245 ETDKLLSLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
34-309 4.34e-24

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 99.11  E-value: 4.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445   34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:pfam13853   3 LMYLIIFLGNGTILFVIKTESSlHQPMYLFLAMLALIDLGLSASTLPTVLGIFWF----GLREISFEACLTQMFFIHKFS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:pfam13853  79 IMESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSY 270
Cdd:pfam13853 159 CADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMvhRFGHNV 238
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 240255445  271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVL 309
Cdd:pfam13853 239 PPLLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
 
Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
34-305 2.66e-113

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 329.03  E-value: 2.66e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15225    9 LIYLVTLLGNLLIILITKVDPAlHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDK----TISFLGCATQMFFFLFLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15225   85 GTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15225  165 CADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSP 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15225  245 ETDKLLSLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
35-298 3.42e-94

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 280.14  E-value: 3.42e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd13954   10 IYLLTLLGNLLIILLVRLDSRlHTPMYFFLSNLSFLDICYTSVTVPKMLANLL----SGDKTISFSGCLTQLYFFFSLGG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd13954   86 TECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPLLKLSC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd13954  166 SDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSSSYSSD 245
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd13954  246 LDKVVSVFYTVVTPMLNPIIYSLRN 270
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
34-298 1.59e-81

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 247.81  E-value: 1.59e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLIlVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVAL 111
Cdd:cd15230    9 LIYLITLVGNLGM-IVLIRIDSRlhTPMYFFLSNLSFVDICYSSVITPKMLVNFLS----EKKTISFAGCAAQFFFFAVF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15230   84 GTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15230  164 SCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSSSYS 243
                        250       260
                 ....*....|....*....|....*..
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15230  244 LDQDKVVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
34-304 7.78e-80

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 244.00  E-value: 7.78e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLiLVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghGRGSpISFLGCAVQMQMFVAL 111
Cdd:cd15421    9 LIFLVALTGNAL-LILLIWLDSRlhTPMYFLLSQLSLMDLMLISTTVPKMATNFLS---GRKS-ISFVGCGTQIFFFLTL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15421   84 GGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPALLKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15421  164 SCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGSYHS 243
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSA 304
Cdd:cd15421  244 PEQDKVVSVFYTILTPMLNPLIYSLRNKEVLGA 276
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
34-307 5.72e-78

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 239.08  E-value: 5.72e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15417    9 GIYLVTLLWNLgLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFR----EQKTISFVGCATQYFVFSGMG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15417   85 LTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15417  165 CSDTFISQVVLFLVAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSSSHSQ 244
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15417  245 DQDKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
13-309 5.95e-78

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 239.57  E-value: 5.95e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  13 FLLQGFFEFPHLKPLLFLVLLAVHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpgh 90
Cdd:cd15943    2 FILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIV-LIRLDSRlhTPMYFFLSHLSFLDLCYSSAITPKMLVNFLA--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  91 gRGSPISFLGCAVQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHL 170
Cdd:cd15943   78 -ENKTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 171 PFCGSRLLVHFFCDITALLHLACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLA 250
Cdd:cd15943  157 PFCGSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLM 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 240255445 251 VTFLHYGCATFMYVRPKSSYSPRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVL 309
Cdd:cd15943  237 AVTIFYGTTLFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
37-298 8.45e-78

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 238.54  E-value: 8.45e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghGRGSpISFLGCAVQMQMFVALGGAE 115
Cdd:cd15912   12 LLTLLGNLLIITITLVDHRlHTPMYFFLRNFSFLEILFTSVVIPKMLANLLS---GKKT-ISFAGCFAQSFFYFFLGTTE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACTR 195
Cdd:cd15912   88 FFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLSCSD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 196 SYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRLD 275
Cdd:cd15912  168 TRLIELLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRPSQSSSLDLN 247
                        250       260
                 ....*....|....*....|...
gi 240255445 276 RTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15912  248 KVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
34-305 1.90e-77

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 237.93  E-value: 1.90e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpgHGRGSpISFLGCAVQMQMFVALG 112
Cdd:cd15231    9 IIYLVTLLGNLLIITLVLLDSHlHTPMYFFLSNLSFLDICYTSVTVPKMLVNLL---RERKT-ISYIGCLAQLFFFVSFV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15231   85 GTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLKLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15231  165 CSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSGYSL 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15231  245 DKDTLISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
37-298 2.24e-77

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 237.17  E-value: 2.24e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLIlVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALGGA 114
Cdd:cd15237   12 LLTLLGNGLI-ILLIWLDSRlhTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHK----TISFVGCAAQMFFFLALGVT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15237   87 ECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRL 274
Cdd:cd15237  167 DTSLNEAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHSTHSPDQ 246
                        250       260
                 ....*....|....*....|....
gi 240255445 275 DRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15237  247 DKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
35-298 3.44e-74

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 229.26  E-value: 3.44e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADlSMPGHGRgspISFLGCAVQMQMFVALGG 113
Cdd:cd15227   10 IYLAALTGNLLIITVVTLDHHlHTPMYFFLKNLSFLDLCYISVTVPKSIAN-SLTNTRS---ISFLGCVAQVFLFIFFAA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15227   86 SELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLKLSC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15227  166 SDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSDSPSL 245
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15227  246 LDLLLSVFYSVVPPTLNPIIYSLRN 270
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
34-298 3.79e-74

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 228.91  E-value: 3.79e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15911    9 VIYIVTMAGNILIIVLVVADRHlHTPMYFFLGNLSCLEICYTSTILPRMLASLLT----GDRTISVSGCIVQFYFFGSLA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15911   85 ATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15911  165 CSDTSLVELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPSTNTSR 244
                        250       260
                 ....*....|....*....|....*.
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15911  245 DLNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
13-301 1.27e-72

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 225.66  E-value: 1.27e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  13 FLLQGFFEFPHLKPLLFLVLLAVHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpgh 90
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMIL-LIRLDSRlhTPMYFFLSHLSFLDICYSSTITPKTLLNLLA--- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  91 GRGSpISFLGCAVQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHL 170
Cdd:cd15408   77 ERKV-ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 171 PFCGSRLLVHFFCDITALLHLACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLA 250
Cdd:cd15408  156 SFCGSNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHLT 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 240255445 251 VTFLHYGCATFMYVRPKSSYSPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15408  236 AVTLFYGSLAFMYLRPSSRYSLDLDKVASVFYTVVIPMLNPLIYSLRNKEV 286
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
34-305 1.64e-72

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 225.18  E-value: 1.64e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALG 112
Cdd:cd15235   10 AMYLLTLLGNLLIVLLIRSDPRlHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKT----ISYAGCLAQMYFFIAFG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15235   86 NTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLS 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15235  166 CSDTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQPSSSYSA 245
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15235  246 DKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
34-304 1.16e-70

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 220.35  E-value: 1.16e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVAL 111
Cdd:cd15429    9 VMYLLTLLGNFLIIL-LIRLDPRlhTPMYFFLSHLSFLDICYTTSVVPQMLAHFLA----EHKTISFASCVAQLFISLAL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15429   84 GGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVVRL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15429  164 ACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSGSS 243
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSA 304
Cdd:cd15429  244 ALQEKMISLFYAVVTPMLNPLIYSLRNKEVKGA 276
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
36-298 2.13e-70

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 219.46  E-value: 2.13e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  36 HLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALGGA 114
Cdd:cd15224   11 YVLTLLENLLIILTIWLNSQlHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKS----ISFVGCMTQLYFFLSLACT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15224   87 ECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCT 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRL 274
Cdd:cd15224  167 DMSLAELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAISSFDS 246
                        250       260
                 ....*....|....*....|....
gi 240255445 275 DRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15224  247 NKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
35-307 5.24e-70

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 218.73  E-value: 5.24e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15411   10 IYVITVMGNLgMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLS----GRKAISFAGCFVQMYFFIALAT 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15411   86 TECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLLKLSC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15411  166 SDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSSYSLG 245
                        250       260       270
                 ....*....|....*....|....*....|....
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15411  246 QDKVASVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
13-309 2.16e-69

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 217.91  E-value: 2.16e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  13 FLLQGFFEFPHLKPLLFLVLLAVHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHG 91
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLgMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  92 rgspISFLGCAVQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLP 171
Cdd:cd15410   81 ----ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLS 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 172 FCGSRLLVHFFCDITALLHLACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAV 251
Cdd:cd15410  157 FCGSNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTA 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 240255445 252 TFLHYGCATFMYVRPKSSYSPRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVL 309
Cdd:cd15410  237 ITIFHGTILFMYCRPSSSYSLDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
39-298 2.25e-69

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 216.72  E-value: 2.25e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  39 TLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALGGAECF 117
Cdd:cd15947   14 TLLGNTaIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLW----GPDKTISYGGCVTQLYIFLWLGSTECV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 118 LLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACTRSY 197
Cdd:cd15947   90 LLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIKLACVDTT 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 198 VDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRLDRT 277
Cdd:cd15947  170 FNELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSSYSQDQGKF 249
                        250       260
                 ....*....|....*....|.
gi 240255445 278 LALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15947  250 ISLFYTVVTPTLNPLIYTLRN 270
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
35-298 2.28e-67

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 211.70  E-value: 2.28e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALGG 113
Cdd:cd15918   10 MYLVTVLGNLLIILAIGSDSHlHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKS----ISYAGCLTQMYFFLLFGD 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15918   86 LDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15918  166 SDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPSSHSAS 245
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15918  246 KDSVAAVMYTVVTPMLNPFIYSLRN 270
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
13-307 2.81e-67

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 212.30  E-value: 2.81e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  13 FLLQGFFEFPHLKPLLFLVLLAVHLATLSGNLLILVAV-ISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHG 91
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIrMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  92 rgspISFLGCAVQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLP 171
Cdd:cd15945   81 ----IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLS 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 172 FCGSRLLVHFFCDITALLHLACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAV 251
Cdd:cd15945  157 FCGSNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTA 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 240255445 252 TFLHYGCATFMYVRPKSSYSPRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15945  237 VGLFYGTLLFMYLRPSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
35-304 1.07e-66

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 210.26  E-value: 1.07e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrgSPISFLGCAVQMQMFVALG 112
Cdd:cd15420   10 LYIFTLLGNGLILG-LIWLDSRlhTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQR----KTISFAGCGTQMYLFLALA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15420   85 HTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15420  165 CADTWINEILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSA 244
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSA 304
Cdd:cd15420  245 EQEKILSLFYSLFNPMLNPLIYSLRNKQVKGA 276
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
35-307 1.26e-66

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 210.24  E-value: 1.26e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLlILVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15419   10 IYMVTVLGNI-GMIIIISTDSRlhTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESK----TISYNGCAAQFFFFSLFG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15419   85 TTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPLLKLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15419  165 CSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGAVSSP 244
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15419  245 EQSKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
35-298 3.19e-66

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 208.76  E-value: 3.19e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15914   10 IYLFIITGNLLIFTVVRLDTHlHTPMYFFISILSFLEIWYTTVTIPKMLSNLL----SEEKTISFNGCLLQMYFFHSLGI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15914   86 TECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLLSLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15914  166 TDTSLNVLVDFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSKSYSLD 245
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15914  246 YDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
35-313 4.62e-66

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 208.82  E-value: 4.62e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15414   10 VYLITLLGNLGMII-LIQVDSRlhTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFV----EKKAISFLGCAAQMWFFGLFV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15414   85 AAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPLLSLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15414  165 CADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSSSSSL 244
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVLGFRG 313
Cdd:cd15414  245 DLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTIRRKM 285
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
35-307 1.38e-64

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 204.91  E-value: 1.38e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghGRGSpISFLGCAVQMQMFVALG 112
Cdd:cd15416   10 IYSVTLLGNLSIIL-LIRISSQlhTPMYFFLSHLAFSDICYSSSVTPKMLVNFLV---EKTT-ISYPGCAAQLCSAATFG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15416   85 TVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15416  165 CSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSSYSM 244
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15416  245 DQNKVVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
36-305 1.90e-64

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 204.54  E-value: 1.90e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  36 HLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALGGA 114
Cdd:cd15434   11 YLLTLVGNTtIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLW----GPDKTISYVGCAIQLFIALGLGGT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15434   87 ECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALIKLACV 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRL 274
Cdd:cd15434  167 DTTAYEATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNSVSQDQ 246
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 275 DRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15434  247 GKFLTLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
34-307 2.82e-64

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 204.18  E-value: 2.82e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLiLVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVAL 111
Cdd:cd15409    9 AIYLITLVGNLG-LIALIWKDSHlhTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKM----ISFSGCAAQFFFFGFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15409   84 ATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKI 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15409  164 SCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYA 243
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15409  244 LDQDMMDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
35-298 4.58e-64

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 203.22  E-value: 4.58e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpgHGRGSpISFLGCAVQMQMFVALGG 113
Cdd:cd15431   10 VYLVTLLGNGLIILLIRVDSQlHTPMYFFLSNLSFLDICYTTSSVPQMLVNCL---SDRPT-ISYSRCLAQMYISLFLGI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVgLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15431   86 TECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTV-IPVLTMPLHFCGPNVINHFFCEVQALLKLAC 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15431  165 SDTSLNEILMFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQSKSSSD 244
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15431  245 QDKIISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
34-305 8.68e-64

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 202.66  E-value: 8.68e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAV-ISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLsMPGHGrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15424    9 IIYLLTILGNLVIIILVqTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHL-LAGNG---AISFARCTTQMYIALSLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15424   85 STECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15424  165 CADTHITEAIVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSGSTP 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15424  245 DRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
34-305 9.77e-64

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 202.83  E-value: 9.77e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVAL 111
Cdd:cd15229    9 VIYLLTLLGNLLIML-VIRADSHlhTPMYFFLSHLSFLDICYSSVTVPKMLENLLS----ERKTISVEGCIAQIFFFFFF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15229   84 AGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15229  164 SCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSASS 243
                        250       260       270
                 ....*....|....*....|....*....|....
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15229  244 SVLDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
13-309 1.12e-63

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 203.09  E-value: 1.12e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  13 FLLQGFFEFPHLKPLLFLVLLAVHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpgHG 91
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLgMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFL---TK 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  92 RGSpISFLGCAVQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLP 171
Cdd:cd15944   78 HKV-ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLS 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 172 FCGSRLLVHFFCDITALLHLACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAV 251
Cdd:cd15944  157 FCGSNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTG 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 240255445 252 TFLHYGCATFMYVRPKSSYSPRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVL 309
Cdd:cd15944  237 VTLFYGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
35-305 1.82e-63

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 201.94  E-value: 1.82e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVIsVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15428   10 IYLMTVLGNLLLVLLVI-VDSHlhTPMYFFLSNLSVLELCYTTTVVPQMLVHLL----SERKIISFIRCAAQLYFFLSFG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15428   85 ITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15428  165 STDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSSTSK 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15428  245 EYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
34-298 2.28e-62

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 199.02  E-value: 2.28e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15232    9 FLYAAALTGNSLIILAISTSPKlHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLT----ERKTISFGGCMAQLYFFTWSL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15232   85 GSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15232  165 CSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSSSYSP 244
                        250       260
                 ....*....|....*....|....*.
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15232  245 EKDKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
34-298 3.69e-62

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 198.30  E-value: 3.69e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLsMPGHgrgSPISFLGCAVQMQMFVALG 112
Cdd:cd15915    9 LLYLASLLGNGAILAVVIAEPRlHSPMYFFLGNLSCLDIFYSSVTVPKMLAGL-LSEH---KTISFQGCISQLHFFHFLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15915   85 SSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLH-GGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15915  165 CGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLLLKVrSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSGDS 244
                        250       260
                 ....*....|....*....|....*..
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15915  245 LEQDRIVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
34-298 5.33e-62

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 197.98  E-value: 5.33e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGN-LLILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrgSPISFLGCAVQMQMFVALG 112
Cdd:cd15430    9 IMYLVILLGNgVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSER----KTISFSGCAVQMYLSLAMG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15430   85 STECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15430  165 CVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQ 244
                        250       260
                 ....*....|....*....|....*.
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15430  245 ISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
35-298 1.05e-61

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 197.05  E-value: 1.05e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15939   10 IYLATVLGNLLIVVTIKASQTlGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLS----ERKTISFNGCMTQLFAEHFFGG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15939   86 AEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASAlRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSpr 273
Cdd:cd15939  166 TDTYVIGLLVVANSGLICLLSFLILLISYIVILYS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVTTFP-- 242
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15939  243 IDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
34-309 1.76e-61

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 197.21  E-value: 1.76e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15406   18 GIYVVTVVGNLgMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVS----EKNIISYPECMTQLFFFCVFA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15406   94 IAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVINHYFCDILPLLKLS 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15406  174 CSSTYINELLLFIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKPSSSSSM 253
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVL 309
Cdd:cd15406  254 TQEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKVL 290
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
35-305 3.54e-61

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 196.13  E-value: 3.54e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15916   10 IYLLTVLGNLLILLTVWVDSHlHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPG---GKVISFGGCVAQLYFFHFLGS 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15916   87 TECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLAC 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSpr 273
Cdd:cd15916  167 ADTTINELVIFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEA-- 244
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15916  245 LDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
35-298 4.74e-61

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 195.50  E-value: 4.74e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLsMPGHgrgSPISFLGCAVQMQMFVALGG 113
Cdd:cd15226   10 FYVATVLGNLLIVVTVTSDPHlHSPMYFLLANLSFIDLCLSSFATPKMICDL-LREH---KTISFGGCMAQIFFLHFFGG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15226   86 SEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASAlRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSpr 273
Cdd:cd15226  166 TDTYVLELMVVANSGLISLVCFLLLLISYIVILVT-VRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFP-- 242
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15226  243 VDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
35-307 1.43e-60

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 194.46  E-value: 1.43e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15413   10 IYLTTVMGNLgMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVV----EQNTISFYACATQLAFFLTFII 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15413   86 SELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15413  166 SDTHEKELIILIFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSSHSLD 245
                        250       260       270
                 ....*....|....*....|....*....|....
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15413  246 TDKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
34-298 4.28e-60

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 192.92  E-value: 4.28e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrgSPISFLGCAVQMQMFVALG 112
Cdd:cd15913    9 VIYILTLLGNGAIICAVWWDRRlHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSET----KTISFSGCFLQFYFFFSLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15913   85 TTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPLLALS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15913  165 CVPAPGTELICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSGNST 244
                        250       260
                 ....*....|....*....|....*.
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15913  245 GMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
35-307 9.91e-60

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 192.64  E-value: 9.91e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLsMPGHgrgSPISFLGCAVQMQMFVALG 112
Cdd:cd15407   10 IYLITLVGNLGMIL-LILLDSRlhTPMYFFLSNLSLVDIGYSSAVTPKVMAGL-LTGD---KVISYNACAAQMFFFVVFA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15407   85 TVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVLALS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15407  165 CSDIHISEIVLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSM 244
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15407  245 DTDKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
37-305 1.19e-59

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 192.02  E-value: 1.19e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLsmpgHGRGSPISFLGCAVQMQMFVALGGAE 115
Cdd:cd15234   12 LVTVLGNLLIILAVSSDSHlHTPMYFFLSNLSFADICFSSTTVPKMLVNI----QTQSKSISYTGCLTQMCFFLLFGGLD 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACTR 195
Cdd:cd15234   88 NFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACSD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 196 SYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRLD 275
Cdd:cd15234  168 TLINNILIYLATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSAVTHSSRKT 247
                        250       260       270
                 ....*....|....*....|....*....|
gi 240255445 276 RTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15234  248 AVASVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
34-298 1.83e-59

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 191.39  E-value: 1.83e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15936    9 LVYLTTWLGNLLIIITVISDPHlHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTK----TISFNGCMAQMFFFHFTG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15936   85 GAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIAsALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15936  165 CTDTFLLELLMVSNSGLVTLLIFFILLISYTVIL-VKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFPM 243
                        250       260
                 ....*....|....*....|....*.
gi 240255445 273 rlDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15936  244 --DKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
36-305 2.02e-59

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 191.54  E-value: 2.02e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  36 HLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrgSPISFLGCAVQMQMFVALGGA 114
Cdd:cd15432   11 YILTLLGNLaIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQ----KTISYGGCVAQLFIFLGLGST 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15432   87 ECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCV 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRL 274
Cdd:cd15432  167 DTTANEAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPSNSSHDR 246
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 275 DRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15432  247 GKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
34-298 6.83e-58

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 187.30  E-value: 6.83e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLIlVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVAL 111
Cdd:cd15946    9 LIYLSILLGNGLI-ITLICLDSRlhTPMYFFLSVLSLLDMSYVTTTVPQMLVHLL----SHKKTISFTGCVAQMYIFLAL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15946   84 GITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15946  164 ACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSNYS 243
                        250       260
                 ....*....|....*....|....*..
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15946  244 PERDKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
34-307 8.79e-58

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 187.62  E-value: 8.79e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15415    9 LIYFITLLGNLgMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLV----EKKTISYSACIAQHFFFAVFV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15415   85 TTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15415  165 CSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQYSL 244
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15415  245 EQEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
36-305 1.32e-57

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 186.92  E-value: 1.32e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  36 HLATLSGN-LLILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLsmpgHGRGSPISFLGCAVQMQMFVALGGA 114
Cdd:cd15433   11 YLLTLVGNtIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANL----RGPALTITRGGCVAQLFISLALGSA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15433   87 ECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACG 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPRL 274
Cdd:cd15433  167 DDETTEVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYSQAH 246
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 275 DRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15433  247 GKFVSLFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
35-308 5.56e-57

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 185.37  E-value: 5.56e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLlILVAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15418   11 SYILTLVGNL-TLIALICLDSRlhTPMYFFVGNLSFLDLWYSSVYTPKILADCI----SKDKSISFAGCAAQFFFSAGLA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15418   86 YSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15418  166 CDDTRVYELILYFILGFNVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSSHTP 245
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRV 308
Cdd:cd15418  246 DRDKVVALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
34-307 6.65e-57

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 185.29  E-value: 6.65e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVAL 111
Cdd:cd15412    9 VIYLITLLGNLGMIL-LIRLDSRlhTPMYFFLSHLSFVDLCYSSNVTPKMLVNFL----SEKKTISFAGCFTQCYFFIAL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15412   84 VITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15412  164 SCSDTYVKETAMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEES 243
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHR 307
Cdd:cd15412  244 VEQSKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
34-298 9.48e-56

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 181.87  E-value: 9.48e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15940    9 VLYLLTLSGNILIMITIVMDPRlHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLS----EEKTISFNGCVTQLFFLHLFA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15940   85 CTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASAlRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSp 272
Cdd:cd15940  165 CTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVS-LRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTSFS- 242
                        250       260
                 ....*....|....*....|....*.
gi 240255445 273 rLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15940  243 -EDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
34-305 1.81e-55

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 181.48  E-value: 1.81e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghGRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15228    9 AFYLCTLLGNLLILSAILSDPRlHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLW----GQSRVISLGGCMSQVFFYHFLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15228   85 STECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPksSYSP 272
Cdd:cd15228  165 CADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQP--TPSP 242
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15228  243 VLVTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
34-305 1.89e-55

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 181.46  E-value: 1.89e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNL-LILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15405    9 GIYVVTVVGNLgLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVS----EKNTISYAGCMTQLFFFCFFV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15405   85 ISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLLQLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15405  165 CTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSVGSV 244
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15405  245 NQGKVSSVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
34-305 1.13e-53

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 176.88  E-value: 1.13e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVaVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLsmpgHGRGSPISFLGCAVQMQMFVAL 111
Cdd:cd15236    9 AMYLTTVLGNLLIIL-LIRLDSHlhTPMYFFLSHLAFTDVSFSSVTVPKMLMNM----QTQDQSIPYAGCISQMYFFIFF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15236   84 GCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15236  164 SCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNS 243
                        250       260       270
                 ....*....|....*....|....*....|....
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15236  244 SDKDIVASVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
35-305 1.60e-52

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 173.77  E-value: 1.60e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15942   10 VYLLTLSGNSLIILVVISDLQlHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLS----GGRIISFGGCVTQLFFFHFLGC 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15942   86 AECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSpr 273
Cdd:cd15942  166 ADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQDP-- 243
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15942  244 LDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
34-298 1.36e-51

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 171.10  E-value: 1.36e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS--RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVAL 111
Cdd:cd15935    9 ACYAAILLGNLLIVVTVHADPHllQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRT----ISFGGCMAQLFFLHFL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 112 GGAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15935   85 GGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIKL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASAlRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS 271
Cdd:cd15935  165 ACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTT-LRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSS 243
                        250       260
                 ....*....|....*....|....*..
gi 240255445 272 prLDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15935  244 --VDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
35-298 1.44e-50

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 168.51  E-value: 1.44e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLsmpgHGRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15938   10 AYTMVLVGNLLIMVTVRSDPKlSSPMYFLLGNLSFLDLCYSTVTCPKMLVDF----LSQRKAISYEACIAQLFFLHFVGA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15938   86 AEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIasaLRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSpr 273
Cdd:cd15938  166 TDTCVTELLMVSNSGLISTVCFVVLVTSYTTI---LVTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFP-- 240
                        250       260
                 ....*....|....*....|....*
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15938  241 VDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
35-305 1.76e-50

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 168.49  E-value: 1.76e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVP--SRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrGSPISFLGCAVQMQMFVALG 112
Cdd:cd15941   10 IYLLTVLGNLLILLTIGSDPhlHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLS---GRTISFEGCVVQLYAFHFLA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15941   87 STECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLKLA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSP 272
Cdd:cd15941  167 CADTTINELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSSSQAG 246
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240255445 273 rlDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15941  247 --AGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
36-298 8.81e-49

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 163.75  E-value: 8.81e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  36 HLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLsmpgHGRGSPISFLGCAVQMQMFVALGGA 114
Cdd:cd15937   11 YLIILPGNILIILTIQGDPQlGSPMYFFLANLALLDICYSSITPPKMLADF----FSERKTISYGGCMAQLFFLHFLGAA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15937   87 EMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLACT 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIAsALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSprL 274
Cdd:cd15937  167 NTYTVELLMFSNSGLVILLCFLLLLISYAFLL-AKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFP--M 243
                        250       260
                 ....*....|....*....|....
gi 240255445 275 DRTLALVYTNVTPLLYPLIYSLRN 298
Cdd:cd15937  244 DKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
35-305 2.53e-47

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 160.34  E-value: 2.53e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrgSPISFLGCAVQMQMFVALGG 113
Cdd:cd15233   10 AYIVTIGGNLSILAAILLEPKlHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHK----RTISYAACLSQLFFFHLLAG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15233   86 ADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPLFQLSC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:cd15233  166 SSTHLNELLLFVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGSVYSSD 245
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15233  246 KDKVIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
34-301 4.67e-43

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 149.10  E-value: 4.67e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15950    9 SMYVIALLGNGTILLVIKLDPSlHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWL----GSAEISFEACFTQMFFVHSFT 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15950   85 AVESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHY--GCATFMYVRPKSSY 270
Cdd:cd15950  165 CADPRPSSLYSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYipGLLSIYTQRFGQGV 244
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15950  245 PPHTQVLLADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
34-301 4.67e-39

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 138.58  E-value: 4.67e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPSR-PPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALG 112
Cdd:cd15917    9 AMYLVALLGNITILFVIKIESSLhEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNARE----ISFDACLAQMFFIHSFT 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15917   85 AMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSY 270
Cdd:cd15917  165 CGDTRVNSIYGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLthRFGHHV 244
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15917  245 PPHVHILLANLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
35-305 1.54e-36

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 132.42  E-value: 1.54e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALGG 113
Cdd:cd15223   10 LYLVALVANSLLLLIIKLERSlHQPMYILLGILAAVDIVLATTILPKMLAIFWF----DANTISLPGCFAQMFFIHFFTA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLAC 193
Cdd:cd15223   86 MESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALVSLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 194 TRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSYS 271
Cdd:cd15223  166 GDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLtyRFGKTIP 245
                        250       260       270
                 ....*....|....*....|....*....|....
gi 240255445 272 PRLDRTLALVYTNVTPLLYPLIYSLRNREITSAI 305
Cdd:cd15223  246 PDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
37-301 2.52e-35

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 128.92  E-value: 2.52e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALGGAE 115
Cdd:cd15953   12 IVTLLGNCTILFVVGKEQSlHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKE----ITFSGCLTQMFFIHTLSIME 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACTR 195
Cdd:cd15953   88 SAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVVKLACGD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 196 SYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSYSPR 273
Cdd:cd15953  168 TTINRIYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLthRFGQGIAPH 247
                        250       260
                 ....*....|....*....|....*...
gi 240255445 274 LDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15953  248 IHIILANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
36-301 3.46e-34

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 125.87  E-value: 3.46e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  36 HLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLsmpgHGRGSPISFLGCAVQMQMFVALGGA 114
Cdd:cd15221   11 YIVALLGNSLLLFVIVTERSlHEPMYLFLSMLAVTDLLLSTTTVPKMLAIF----WFGAGEISFDGCLTQMFFVHFVFVT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACT 194
Cdd:cd15221   87 ESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLACA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 195 RSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCA--TFMYVRPKSSYSP 272
Cdd:cd15221  167 DITVNIWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAffSFLTHRFGRHIPR 246
                        250       260
                 ....*....|....*....|....*....
gi 240255445 273 RLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15221  247 HVHILLANLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
34-301 2.25e-33

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 123.76  E-value: 2.25e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALG 112
Cdd:cd15222    9 LLYLVALLGNSTILFVIKTEPSlHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNARE----ISFDACLAQMFFIHTFS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15222   85 FMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDVMKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYG---CATFMYvRPKSS 269
Cdd:cd15222  165 CSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVpmiGLSMVH-RFGKH 243
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240255445 270 YSPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15222  244 ASPLVHVLMANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
34-301 2.89e-31

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 118.22  E-value: 2.89e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALG 112
Cdd:cd15951    9 IMYAVALLGNFTILFIVKTEPSlHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSR----EIDFSACLTQMFFIHSFS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15951   85 TMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHY--GCATFMYVRPKSSY 270
Cdd:cd15951  165 CADTRVSRAYGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYipALFSFLTHRFGHNV 244
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15951  245 PPHVHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
34-301 3.82e-31

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 117.87  E-value: 3.82e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgspISFLGCAVQMQMFVALG 112
Cdd:cd15952    9 AVYLIALLGNCTILFVIKTEQSlHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLRE----ISFGGCLAQMFFIHTFT 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15952   85 GMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELpLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYS- 271
Cdd:cd15952  165 CASIRINII-YGLFAISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGHNi 243
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 272 PRLDRTL-ALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15952  244 PRYIHILlANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
35-301 1.03e-29

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 114.19  E-value: 1.03e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILvAVISVPSR--PPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghGRGSpISFLGCAVQMQMFVALG 112
Cdd:cd15956   10 IYVLSLLGNGVLL-SVVWKEHRlhQPMFLFLAMLAATDLVLALSTAPKLLAILWF---GATA-ISSYVCLSQMFLVHAFS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15956   85 AMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVVKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSY 270
Cdd:cd15956  165 CGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLmhRFGHSV 244
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15956  245 PSAAHVLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
34-301 1.28e-26

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 105.76  E-value: 1.28e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15948   10 SAFTVALLGNCTLLYVIKTEPSlHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWF----NSREINFNACLVQMFFLHSFS 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15948   86 IMESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSY 270
Cdd:cd15948  166 CGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTmhRFARHV 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15948  246 APHVHILLANFYLLFPPMMNPIVYGVKTKQI 276
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
34-309 4.34e-24

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 99.11  E-value: 4.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445   34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:pfam13853   3 LMYLIIFLGNGTILFVIKTESSlHQPMYLFLAMLALIDLGLSASTLPTVLGIFWF----GLREISFEACLTQMFFIHKFS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:pfam13853  79 IMESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSSY 270
Cdd:pfam13853 159 CADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMvhRFGHNV 238
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 240255445  271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREITSAIHRVL 309
Cdd:pfam13853 239 PPLLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
58-301 1.91e-23

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 97.20  E-value: 1.91e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  58 PMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYA 137
Cdd:cd15954   34 PMYYFLSMLSFTDITLCTTMVPKAMCIFWF----NLKEISFNACLVQMFFVHTFTGMESGVLMLMALDRYVAICYPLRYA 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 138 SIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLACTRSYVDELPLLGACLVLLLLPSML 217
Cdd:cd15954  110 TILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLACANIRVDAIYGLMVALLIGGFDILC 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 218 ILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPK---SSYSPRLDRTLALVYTNVTPLLYPLIY 294
Cdd:cd15954  190 ISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHRfggHHITPHIHIIMANLYLLLPPMMNPIVY 269

                 ....*..
gi 240255445 295 SLRNREI 301
Cdd:cd15954  270 GVKTKQI 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
34-301 2.26e-22

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 94.46  E-value: 2.26e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGhgrgSPISFLGCAVQMQMFVALG 112
Cdd:cd15949   25 SMYLIAVLGNCTILFIIKSEPSlHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSS----NEIPLHACLLQMFLIHSFS 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHLA 192
Cdd:cd15949  101 AIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWYRTNIIAHSYCEHMAVVGLA 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 193 CTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYG--CATFMYVRPKSSY 270
Cdd:cd15949  181 CGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAILAFYVpiAVSSLIHRFGQNV 260
                        250       260       270
                 ....*....|....*....|....*....|.
gi 240255445 271 SPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15949  261 PPPTHILLANFYLLIPPMLNPIVYGVRTKQI 291
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
42-294 3.82e-22

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 93.13  E-value: 3.82e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445   42 GNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGrgsPISFLGCAVQMQMFVALGGAECFLLA 120
Cdd:pfam00001   1 GNLLVILVILRNKKlRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDW---PFGSALCKIVGALFVVNGYASILLLT 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  121 AMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRllvHFFCDITALLHLACTRSYVde 200
Cdd:pfam00001  78 AISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGN---VTVCFIDFPEDLSKPVSYT-- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  201 lplLGACLVLLLLPSMLILTSYGAIASA-------LRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYVRPKSSYSPR 273
Cdd:pfam00001 153 ---LLISVLGFLLPLLVILVCYTLIIRTlrksaskQKSSERTQRRRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCE 229
                         250       260
                  ....*....|....*....|....*..
gi 240255445  274 LDR------TLALVYTNVTPLLYPLIY 294
Cdd:pfam00001 230 LSRlldkalSVTLWLAYVNSCLNPIIY 256
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
34-301 2.82e-21

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 91.37  E-value: 2.82e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpghgRGSPISFLGCAVQMQMFVALG 112
Cdd:cd15955    9 IMFLLAVLGNCTLLIVIKRERSlHQPMYIFLAMLAATDLGLCPCILPKMLAIFWF----QLREISFNACLAQMFFIHTLQ 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCL-GGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITALLHL 191
Cdd:cd15955   85 AFESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVrAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445 192 ACTRSYVDELPLLGACLVLLLLPSMLILTSYGAIASALRRLHGGGGRRKAASTCASHLAVTFLHYGCATFMYV--RPKSS 269
Cdd:cd15955  165 AADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFahRFGHH 244
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240255445 270 YSPRLDRTLALVYTNVTPLLYPLIYSLRNREI 301
Cdd:cd15955  245 VAPYVHILLSNLYLLVPPVLNPIVYGVKTKQI 276
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
37-187 6.64e-14

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 70.40  E-value: 6.64e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSPIsflgCAVQMQMFVALGGAE 115
Cdd:cd00637   10 VVGLVGNLLVILVILRNRRlRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDAL----CKLLGFLQSVSLLAS 85
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFCDITA 187
Cdd:cd00637   86 ILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLTL 157
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
37-150 5.30e-09

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 56.45  E-value: 5.30e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPSRPPML-LFLCQLSAIELCYTLVVVPRSlADLSMPGHGrgsPISFLGCAVQMQMFVALGGAE 115
Cdd:cd15959   12 LVIVGGNLLVIVAIAKTPRLQTMTnVFVTSLACADLVMGLLVVPPG-ATILLTGHW---PLGTTVCELWTSVDVLCVTAS 87
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGlCARLAL 150
Cdd:cd15959   88 IETLCAIAVDRYLAITNPLRYEALVTKR-RARTAV 121
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
37-161 8.68e-09

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 55.26  E-value: 8.68e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgsPISFLGCAVQMQMFVALGGAE 115
Cdd:cd14967   11 LVTVFGNLLVILAVYRNRRlRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYW----PFGPVLCRFWIALDVLCCTAS 86
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSV 161
Cdd:cd14967   87 ILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISL 132
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
37-169 1.55e-07

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 51.70  E-value: 1.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSpisFLGCAVQMQMFVALGgAEC 116
Cdd:cd14971   13 LGLVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGD---FMCKFVHYFQQVSMH-ASI 88
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 240255445 117 FLLAAMAYDRYVAICHPLRYASIVTPglcaRLALAC--CLGGLAVSVGLTVAVFH 169
Cdd:cd14971   89 FTLVAMSLDRFLAVVYPLRSLHIRTP----RNALAAsgCIWVVSLAVAAPVLALH 139
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
37-164 6.32e-06

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 46.86  E-value: 6.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLS--GNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLAdLSMpghgrGSPISFLGCAVQMQMFVALGG 113
Cdd:cd14968   10 IAVLSvlGNVLVIWAVKLNRAlRTVTNYFIVSLAVADILVGALAIPLAIL-ISL-----GLPTNFHGCLFMACLVLVLTQ 83
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLcARLALACCLgGLAVSVGLT 164
Cdd:cd14968   84 SSIFSLLAIAIDRYLAIKIPLRYKSLVTGRR-AWGAIAVCW-VLSFLVGLT 132
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
37-150 2.11e-05

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 45.52  E-value: 2.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPSRPPML-LFLCQLSAIELCYTLVVVPRSlADLSMPGHGrgsPISFLGCAVQMQMFVALGGAE 115
Cdd:cd15058   12 LAIVVGNLLVIIAIARTSRLQTMTnIFITSLACADLVMGLLVVPLG-ATIVVTGKW---QLGNFWCELWTSVDVLCVTAS 87
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPgLCARLAL 150
Cdd:cd15058   88 IETLCVIAVDRYIAITRPLRYQVLLTK-RRARVIV 121
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
34-151 7.85e-05

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 43.50  E-value: 7.85e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPrslADLSMPGHGRGSPISFLGCAVQMQMFVALG 112
Cdd:cd14979    9 AIFVVGIVGNLLTCIVIARHKSlRTTTNYYLFSLAVSDLLILLVGLP---VELYNFWWQYPWAFGDGGCKLYYFLFEACT 85
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALA 151
Cdd:cd14979   86 YATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILA 124
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
37-137 1.21e-04

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 42.72  E-value: 1.21e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSPISflgCAVQMQMFVALGGAE 115
Cdd:cd15053   12 LLTVFGNVLVIMSVFRERSlQTATNYFIVSLAVADLLVAILVMPFAVYVEVNGGKWYLGPIL---CDIYIAMDVMCSTAS 88
                         90       100
                 ....*....|....*....|..
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYA 137
Cdd:cd15053   89 IFNLCAISIDRYIAVTQPIKYA 110
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
39-180 1.29e-04

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 42.75  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  39 TLSGNLLILVAVISV--PSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSPIsflgCAVQMQMFVALGGAEC 116
Cdd:cd15104   13 IITGNLLVIVALLKLirKKDTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGENTQKVL----CLLRMCFVITSCAASV 88
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 240255445 117 FLLAAMAYDRYVAICHPLRYASIVT-PGLCARLALACCLGGLAVSVGLTVAVF----HLPFCGSRLLVH 180
Cdd:cd15104   89 LSLAAIAFDRYLALKQPLRYKQIMTgKSAGALIAGLWLYSGLIGFLPLISPQFqqtsYKGKCSFFAAFH 157
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
37-183 2.84e-04

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 42.02  E-value: 2.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPSRP--PMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSPI-SFLGCAVQMQMFVALgg 113
Cdd:cd15098   13 LGVLGNSLVITVLARVKPGKRrsTTNVFILNLSIADLFFLLFCVPFQATIYSLPEWVFGAFMcKFVHYFFTVSMLVSI-- 90
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 240255445 114 aecFLLAAMAYDRYVAICHPLRYASIVTPglcaRLALA--CCLGGLAVSVGLTVAVFHLPFCGSRLLVHFFC 183
Cdd:cd15098   91 ---FTLVAMSVDRYIAVVHSRTSSSLRTR----RNALLgvLVIWVLSLAMASPVAVHQDLVHHWTASNQTFC 155
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
37-142 3.06e-04

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 41.83  E-value: 3.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSpisfLGCAVQMQMFVALGGAE 115
Cdd:cd15321   18 LFTIFGNVLVIIAVLTSRSlRAPQNLFLVSLAAADILVATLIIPFSLANELMGYWYFRK----TWCEIYLALDVLFCTSS 93
                         90       100
                 ....*....|....*....|....*..
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTP 142
Cdd:cd15321   94 IVHLCAISLDRYWSVSRAIEYNSKRTP 120
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
107-153 4.64e-04

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 41.08  E-value: 4.64e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 240255445 107 MFVALGGAECFLLAAMAYDRYVAICHPLRYASIVTPGlCARLALACC 153
Cdd:cd14981   82 MMSFFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKR-RARLMLGAV 127
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
34-135 5.39e-04

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 40.94  E-value: 5.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISV-PSRPPMLLFLCQLSAIELCYTLV-VVPRSLADLSMPGHGRgspiSFLGCAVQ----MQM 107
Cdd:cd15386    9 AILVVATAGNLAVLLAMYRMrRKMSRMHLFVLHLALTDLVVALFqVLPQLIWEITYRFQGP----DLLCRAVKylqvLSM 84
                         90       100
                 ....*....|....*....|....*...
gi 240255445 108 FvalggAECFLLAAMAYDRYVAICHPLR 135
Cdd:cd15386   85 F-----ASTYMLIMMTVDRYIAVCHPLR 107
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
37-161 6.42e-04

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 40.72  E-value: 6.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMpGHGRGSPISflgCAVQMQMFVALGGAE 115
Cdd:cd15329   12 LGTVVGNALVIIAVCLVKKlRTPSNYLIVSLAVSDLLVALLVMPLAIIYELS-GYWPFGEIL---CDVWISFDVLLCTAS 87
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSV 161
Cdd:cd15329   88 ILNLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISI 133
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
39-138 7.90e-04

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 40.49  E-value: 7.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  39 TLSGNLLILVAV-ISVPSRPPMLLFLCQLSAIELCYTLV-VVPRSLADLSMPGHGrgspiSFLGCAVQMQMFVALGGAEC 116
Cdd:cd15197   14 IVVGNSSVLFALwMRKAKKSRMNFFITQLAIADLCVGLInVLTDIIWRITVEWRA-----GDFACKVIRYLQVVVTYAST 88
                         90       100
                 ....*....|....*....|..
gi 240255445 117 FLLAAMAYDRYVAICHPLRYAS 138
Cdd:cd15197   89 YVLVALSIDRYDAICHPMNFSQ 110
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
34-164 1.15e-03

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 39.92  E-value: 1.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAV-ISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSmpghgrGSPISFLGCAVQMQMFVALG 112
Cdd:cd15068    9 AIAVLAILGNVLVCWAVwLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST------GFCAACHGCLFIACFVLVLT 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVTpGLCARLALACCLgGLAVSVGLT 164
Cdd:cd15068   83 QSSIFSLLAIAIDRYIAIRIPLRYNGLVT-GTRAKGIIAICW-VLSFAIGLT 132
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
35-152 1.18e-03

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 39.89  E-value: 1.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSPI----SFLgcavqMQMFV 109
Cdd:cd14993   10 VFLLALVGNSLVIAVVLRNKHmRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLckavPYL-----QGVSV 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 240255445 110 AlggAECFLLAAMAYDRYVAICHPLRyASIVTPGLCARLALAC 152
Cdd:cd14993   85 S---ASVLTLVAISIDRYLAICYPLK-ARRVSTKRRARIIIVA 123
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
39-167 1.21e-03

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 40.13  E-value: 1.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  39 TLSGNLLILVAVISVPS--RPPmLLFLCQLSAIELCYTLVVVPRSLADLSmpgHGRGSPISFLGCAVQMQMFVALGGAEC 116
Cdd:cd15005   14 SLAGNLLFSVLIVRDRSlhRAP-YYFLLDLCLADGLRSLACFPFVMASVR---HGSGWIYGALSCKVIAFLAVLFCFHSA 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 240255445 117 FLLAAMAYDRYVAICHPLRYASivtpglcaRLALACCLGGLAVSVGLTVAV 167
Cdd:cd15005   90 FTLFCIAVTRYMAIAHHRFYAK--------RMTFWTCLAVICMAWTLSVAM 132
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
42-161 1.26e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 39.92  E-value: 1.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  42 GNLLILVAVISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHgrgSPISFLGCAVQMQMFVALG----GAECF 117
Cdd:cd14978   17 GNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYS---SSFLSYFYAYFLPYIYPLAntfqTASVW 93
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 240255445 118 LLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSV 161
Cdd:cd14978   94 LTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNL 137
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
123-163 1.74e-03

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 39.46  E-value: 1.74e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 240255445 123 AYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSVGL 163
Cdd:cd15055   95 AIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVL 135
7tmA_NOFQ_opioid_R cd15092
nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G ...
117-167 2.77e-03

nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The nociceptin (NOP) receptor binds nociceptin or orphanin FQ, a 17 amino acid endogenous neuropeptide. The NOP receptor is involved in the modulation of various brain activities including instinctive and emotional behaviors. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320220 [Multi-domain]  Cd Length: 279  Bit Score: 38.69  E-value: 2.77e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 240255445 117 FLLAAMAYDRYVAICHPLRYASIVTPGLCArlALACCLGGLAVSVGLTVAV 167
Cdd:cd15092   88 FTLTAMSVDRYVAICHPIKALDVRTPHKAK--VVNVCIWALASVVGVPVMV 136
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
39-171 3.18e-03

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 38.38  E-value: 3.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  39 TLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSpisfLGCAVQMQMFVALGGAECF 117
Cdd:cd15323   14 TIVGNVLVVIAVLTSRAlRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQ----VWCNIYLALDVLFCTSSIV 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 240255445 118 LLAAMAYDRYVAICHPLRYASIVTPGLcarlalaccLGGLAVSVGLTVAVFHLP 171
Cdd:cd15323   90 HLCAISLDRYWSVTQAVEYNLKRTPRR---------VKAIIVTVWLISAVISFP 134
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
114-168 3.30e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 38.43  E-value: 3.30e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTPGLCArlALACCLGGLAVSVGLTVAVF 168
Cdd:cd14970   85 TSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKAK--LVSLCVWALSLVLGLPVIIF 137
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
35-146 3.80e-03

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 38.20  E-value: 3.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  35 VHLATLSGNLLILVAVISVPSRPPmLLFLCQLSAIELCYTLVVVPrsLADLSMPGHGRGSPISFLGCAVQMQMFVALGGA 114
Cdd:cd15220    9 LDLTALVGNTAVMVVIAKTPHLRK-FAFVCHLCVVDLLAALLLMP--LGILSSSPFFLGVVFGEAECRVYIFLSVCLVSA 85
                         90       100       110
                 ....*....|....*....|....*....|..
gi 240255445 115 ECFLLAAMAYDRYVAICHPLRYASIVTPGLCA 146
Cdd:cd15220   86 SILTISAISVERYYYIVHPMRYEVKMTIGLVA 117
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
34-135 5.59e-03

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 37.74  E-value: 5.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVP-SRPPMLLFLCQLSAIELCYTLVVVprsLADLSMPGHGR--GSPisfLGCAVQMQMFVA 110
Cdd:cd14986    9 VLFVFTLVGNGLVILVLRRKRkKRSRVNIFILNLAIADLVVAFFTV---LTQIIWEATGEwvAGD---VLCRIVKYLQVV 82
                         90       100
                 ....*....|....*....|....*
gi 240255445 111 LGGAECFLLAAMAYDRYVAICHPLR 135
Cdd:cd14986   83 GLFASTYILVSMSLDRYQAIVKPMS 107
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
61-142 5.70e-03

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 37.88  E-value: 5.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  61 LFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSpisFLGCAVQMQMFVALGgAECFLLAAMAYDRYVAICHPLRYASIV 140
Cdd:cd15097   38 LFILNLSVADLCFILFCVPFQATIYSLEGWVFGS---FLCKAVHFFIYLTMY-ASSFTLAAVSVDRYLAIRYPLRSRELR 113

                 ..
gi 240255445 141 TP 142
Cdd:cd15097  114 TP 115
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
42-161 6.31e-03

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 37.64  E-value: 6.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  42 GNLLILVAVISVPSRPPML-LFLCQLSAIELCYTLVVVPRSLADLsmpghgrGSPISFLG---CAVQMQMFVALGGAECF 117
Cdd:cd15001   16 GNSLVIFVVARFRRMRSVTnVFLASLATADLLLLVFCVPLKTAEY-------FSPTWSLGaflCKAVAYLQLLSFICSVL 88
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 240255445 118 LLAAMAYDRYVAICHPLRYASIVTPGLCARLALACCLGGLAVSV 161
Cdd:cd15001   89 TLTAISIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILAS 132
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
37-142 6.93e-03

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 37.70  E-value: 6.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISvpSRPPMLL---FLCQLSAIELCYTLVVVPRSlADLSMPGHGrgsPISFLGCAVQMQMFVALGG 113
Cdd:cd15051   12 LLTVIGNVLVCLAVAV--NRRLRNLtnyFIVSLAVTDLLLGLLVLPFS-AIYELRGEW---PLGPVFCNIYISLDVMLCT 85
                         90       100
                 ....*....|....*....|....*....
gi 240255445 114 AECFLLAAMAYDRYVAICHPLRYASIVTP 142
Cdd:cd15051   86 ASILNLFAISLDRYLAITAPLRYPSRVTP 114
7tmA_alpha-2D_AR cd15324
alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
37-142 8.35e-03

alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320447 [Multi-domain]  Cd Length: 256  Bit Score: 37.16  E-value: 8.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVI-SVPSRPPMLLFLCQLSAIELCYTLVVVPRSLADLSMPGHGRGSpisfLGCAVQMQMFVALGGAE 115
Cdd:cd15324   12 LVTIVGNVLVVVAVFtSRALRAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGS----TWCAFYLALDVLFCTSS 87
                         90       100
                 ....*....|....*....|....*..
gi 240255445 116 CFLLAAMAYDRYVAICHPLRYASIVTP 142
Cdd:cd15324   88 IVHLCAISLDRYWSVTKAVSYNLKRTP 114
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
37-141 8.83e-03

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 37.18  E-value: 8.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  37 LATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLVVVPRSlADLSMPGH---GRgspisfLGCAVQMQMFVALG 112
Cdd:cd15326   12 LFAIVGNILVILSVVCNRHlRIPTNYFIVNLAIADLLLSFTVLPFS-ATLEILGYwvfGR------IFCDIWAAVDVLCC 84
                         90       100
                 ....*....|....*....|....*....
gi 240255445 113 GAECFLLAAMAYDRYVAICHPLRYASIVT 141
Cdd:cd15326   85 TASILSLCAISIDRYIGVRHSLQYPTIVT 113
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
34-136 9.41e-03

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 37.21  E-value: 9.41e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAVISVPS-RPPMLLFLCQLSAIELCYTLV-VVPRSLADLSMPGHGrgspiSFLGC-AVQ-MQMFV 109
Cdd:cd15196    9 TILVLALFGNSCVLLVLYRRRRkLSRMHLFILHLSVADLLVALFnVLPQLIWDITYRFYG-----GDLLCrLVKyLQVVG 83
                         90       100
                 ....*....|....*....|....*..
gi 240255445 110 ALggAECFLLAAMAYDRYVAICHPLRY 136
Cdd:cd15196   84 MY--ASSYVLVATAIDRYIAICHPLSS 108
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
34-141 9.72e-03

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 37.09  E-value: 9.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240255445  34 AVHLATLSGNLLILVAV-ISVPSRPPMLLFLCQLSAIELCYTLVVVPRSLA----DLSMPGHgrgspisfLGCAVQMQMF 108
Cdd:cd15063    9 FLNVLVVLGNLLVIAAVlCSRKLRTVTNLFIVSLACADLLVGTLVLPFSAVnevlDVWIFGH--------TWCQIWLAVD 80
                         90       100       110
                 ....*....|....*....|....*....|...
gi 240255445 109 VALGGAECFLLAAMAYDRYVAICHPLRYASIVT 141
Cdd:cd15063   81 VWMCTASILNLCAISLDRYLAITRPIRYPSLMS 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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