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Conserved domains on  [gi|122937446|ref|NP_001073969|]
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von Willebrand factor C domain-containing protein 2-like isoform 1 precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
VWC super family cl17735
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
116-171 1.73e-04

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


The actual alignment was detected with superfamily member smart00214:

Pssm-ID: 450195  Cd Length: 59  Bit Score: 38.27  E-value: 1.73e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 122937446   116 CEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADC-AVPECVNPVYE--PEQCCPVC 171
Cdd:smart00214   1 CVHNGRVYNDGETWKPDPCQICTCLDGTTVLCDPVECpPPPDCPNPERVkpPGECCPRC 59
 
Name Accession Description Interval E-value
VWC smart00214
von Willebrand factor (vWF) type C domain;
116-171 1.73e-04

von Willebrand factor (vWF) type C domain;


Pssm-ID: 214564  Cd Length: 59  Bit Score: 38.27  E-value: 1.73e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 122937446   116 CEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADC-AVPECVNPVYE--PEQCCPVC 171
Cdd:smart00214   1 CVHNGRVYNDGETWKPDPCQICTCLDGTTVLCDPVECpPPPDCPNPERVkpPGECCPRC 59
 
Name Accession Description Interval E-value
VWC smart00214
von Willebrand factor (vWF) type C domain;
116-171 1.73e-04

von Willebrand factor (vWF) type C domain;


Pssm-ID: 214564  Cd Length: 59  Bit Score: 38.27  E-value: 1.73e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 122937446   116 CEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADC-AVPECVNPVYE--PEQCCPVC 171
Cdd:smart00214   1 CVHNGRVYNDGETWKPDPCQICTCLDGTTVLCDPVECpPPPDCPNPERVkpPGECCPRC 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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