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Conserved domains on  [gi|122937275|ref|NP_001073907|]
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alpha-1,3-galactosyltransferase 2 [Homo sapiens]

Protein Classification

glycosyltransferase family 6 protein( domain architecture ID 10118525)

glycosyltransferase family 6 protein similar to Homo sapiens alpha-1,3-galactosyltransferase 2 that synthesizes the galactose-alpha(1,3)-galactose group on the glycosphingolipid isoglobotrihexosylceramide or isogloboside 3 (iGb3) by catalyzing the transfer of galactose from UDP-Galactose to its acceptor molecule Gal-beta-1,4-Glc-ceramide, and can also catalyze the addition of galactose to iGb3 itself to form polygalactose structures

CATH:  3.90.550.10
CAZY:  GT6
EC:  2.4.-.-
Gene Ontology:  GO:0016757|GO:0006486
SCOP:  3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyco_transf_6 cd02515
Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO ...
68-339 3.48e-167

Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens; Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase uses a UDP-galactose donor to convert the H-antigen acceptor to the B antigen. Alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase differ only in the identity of four critical amino acid residues.


:

Pssm-ID: 133008  Cd Length: 271  Bit Score: 466.42  E-value: 3.48e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  68 RPEVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLEkYLERFLETAEQHFMAGQSVMYYVFTELPGAV 147
Cdd:cd02515    1 RPDVLTVTPWLAPIVWEGTFNPDVLDEYYRKQNITIGLTVFAVGKYTE-FLERFLESAEKHFMVGYRVIYYIFTDKPAAV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 148 PRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGLPGREAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHW 227
Cdd:cd02515   80 PEVELGPGRRLTVLKIAEESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLHPWWYGK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 228 PSWLLPFERDAHSAAAMAWGQGDFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVL 307
Cdd:cd02515  160 PRKQFPYERRPSSAAYIPEGEGDFYYHGAVFGGSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVL 239
                        250       260       270
                 ....*....|....*....|....*....|..
gi 122937275 308 SPEFCWSPDIGPRAEIRRPRLLWAPKGYRLLR 339
Cdd:cd02515  240 SPEYLWDDRIGQAAEIRLPRLSWLPKNYQEVR 271
 
Name Accession Description Interval E-value
Glyco_transf_6 cd02515
Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO ...
68-339 3.48e-167

Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens; Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase uses a UDP-galactose donor to convert the H-antigen acceptor to the B antigen. Alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase differ only in the identity of four critical amino acid residues.


Pssm-ID: 133008  Cd Length: 271  Bit Score: 466.42  E-value: 3.48e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  68 RPEVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLEkYLERFLETAEQHFMAGQSVMYYVFTELPGAV 147
Cdd:cd02515    1 RPDVLTVTPWLAPIVWEGTFNPDVLDEYYRKQNITIGLTVFAVGKYTE-FLERFLESAEKHFMVGYRVIYYIFTDKPAAV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 148 PRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGLPGREAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHW 227
Cdd:cd02515   80 PEVELGPGRRLTVLKIAEESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLHPWWYGK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 228 PSWLLPFERDAHSAAAMAWGQGDFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVL 307
Cdd:cd02515  160 PRKQFPYERRPSSAAYIPEGEGDFYYHGAVFGGSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVL 239
                        250       260       270
                 ....*....|....*....|....*....|..
gi 122937275 308 SPEFCWSPDIGPRAEIRRPRLLWAPKGYRLLR 339
Cdd:cd02515  240 SPEYLWDDRIGQAAEIRLPRLSWLPKNYQEVR 271
Glyco_transf_6 pfam03414
Glycosyltransferase family 6;
68-340 4.52e-110

Glycosyltransferase family 6;


Pssm-ID: 427285  Cd Length: 289  Bit Score: 322.10  E-value: 4.52e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275   68 RPEVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLeKYLERFLETAEQHFMAGQSVMYYVFTELPGAV 147
Cdd:pfam03414  18 RPDVLTVTPWLAPIVWEGTFDPAILEDYYRPQNLTIGLTVFAVGKYV-RFLELFLESAEKYFMVGHRVIYYVFTDDPAAV 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  148 PRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGLPGREAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHW 227
Cdd:pfam03414  97 PRVPLGPGRQLSVFEIGRYKRWQDISMRRMETISEHIAQRIQHEVDYLFCVDVDMVFRDHFGVETLGPLVAQLHPWWYAA 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  228 PSWLLPFERDAHSAAAMAWGQGDFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVL 307
Cdd:pfam03414 177 DRQKFTYERRPLSAAYIPFGEGDFYYHGAIFGGTVARVYNLTRACHKAILADKANGIEAAWHDESHLNKYFLSHKPTKVL 256
                         250       260       270
                  ....*....|....*....|....*....|...
gi 122937275  308 SPEFCWSPDIGPRAEIRRPRLLWAPKGYRLLRN 340
Cdd:pfam03414 257 SPEYLWDYQIGRPSDLRLVRFAWVPKNYNWVRN 289
Gltr_6 NF041524
family 6 glucosyltransferase;
101-313 3.75e-26

family 6 glucosyltransferase;


Pssm-ID: 469409  Cd Length: 226  Bit Score: 103.86  E-value: 3.75e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 101 LTIGLTIFAVGRYlEKYLERFLETAEQHFMAGQSVMYYVFTELPgavprvALGPGRRLPVERVARERR-WQDVSMARMRT 179
Cdd:NF041524   1 MKIGILYICTGKY-SIFWKDFYLSCEKYFLPGAEKEYFVFTDPD------DLYFKKNNNVHVIYQENLgWPLNTLLRFSM 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 180 LHAALGGLpgREAHFMFCMDVDQHFSGTFGPEALAES-----VAQLHSWHYHWPSWLLPFERDAHSAAAMAWGQGDFYNH 254
Cdd:NF041524  74 FLKIKEEL--KEFDYLFFFNANALFVKPISAEILPTEeenglVGVIHPGYYNKPPIEYPYERRKKSTAYIPYGKGGYYFQ 151
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 122937275 255 AAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPaKVLSPEFCW 313
Cdd:NF041524 152 GGLNGGKTKAYLKLIETCSLNIEKDLKNNIIAIWHDESHLNKYFLDKKP-KILSPAYGY 209
 
Name Accession Description Interval E-value
Glyco_transf_6 cd02515
Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO ...
68-339 3.48e-167

Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens; Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase uses a UDP-galactose donor to convert the H-antigen acceptor to the B antigen. Alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase differ only in the identity of four critical amino acid residues.


Pssm-ID: 133008  Cd Length: 271  Bit Score: 466.42  E-value: 3.48e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  68 RPEVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLEkYLERFLETAEQHFMAGQSVMYYVFTELPGAV 147
Cdd:cd02515    1 RPDVLTVTPWLAPIVWEGTFNPDVLDEYYRKQNITIGLTVFAVGKYTE-FLERFLESAEKHFMVGYRVIYYIFTDKPAAV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 148 PRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGLPGREAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHW 227
Cdd:cd02515   80 PEVELGPGRRLTVLKIAEESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLHPWWYGK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 228 PSWLLPFERDAHSAAAMAWGQGDFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVL 307
Cdd:cd02515  160 PRKQFPYERRPSSAAYIPEGEGDFYYHGAVFGGSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVL 239
                        250       260       270
                 ....*....|....*....|....*....|..
gi 122937275 308 SPEFCWSPDIGPRAEIRRPRLLWAPKGYRLLR 339
Cdd:cd02515  240 SPEYLWDDRIGQAAEIRLPRLSWLPKNYQEVR 271
Glyco_transf_6 pfam03414
Glycosyltransferase family 6;
68-340 4.52e-110

Glycosyltransferase family 6;


Pssm-ID: 427285  Cd Length: 289  Bit Score: 322.10  E-value: 4.52e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275   68 RPEVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLeKYLERFLETAEQHFMAGQSVMYYVFTELPGAV 147
Cdd:pfam03414  18 RPDVLTVTPWLAPIVWEGTFDPAILEDYYRPQNLTIGLTVFAVGKYV-RFLELFLESAEKYFMVGHRVIYYVFTDDPAAV 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  148 PRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGLPGREAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHW 227
Cdd:pfam03414  97 PRVPLGPGRQLSVFEIGRYKRWQDISMRRMETISEHIAQRIQHEVDYLFCVDVDMVFRDHFGVETLGPLVAQLHPWWYAA 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275  228 PSWLLPFERDAHSAAAMAWGQGDFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVL 307
Cdd:pfam03414 177 DRQKFTYERRPLSAAYIPFGEGDFYYHGAIFGGTVARVYNLTRACHKAILADKANGIEAAWHDESHLNKYFLSHKPTKVL 256
                         250       260       270
                  ....*....|....*....|....*....|...
gi 122937275  308 SPEFCWSPDIGPRAEIRRPRLLWAPKGYRLLRN 340
Cdd:pfam03414 257 SPEYLWDYQIGRPSDLRLVRFAWVPKNYNWVRN 289
Gltr_6 NF041524
family 6 glucosyltransferase;
101-313 3.75e-26

family 6 glucosyltransferase;


Pssm-ID: 469409  Cd Length: 226  Bit Score: 103.86  E-value: 3.75e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 101 LTIGLTIFAVGRYlEKYLERFLETAEQHFMAGQSVMYYVFTELPgavprvALGPGRRLPVERVARERR-WQDVSMARMRT 179
Cdd:NF041524   1 MKIGILYICTGKY-SIFWKDFYLSCEKYFLPGAEKEYFVFTDPD------DLYFKKNNNVHVIYQENLgWPLNTLLRFSM 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937275 180 LHAALGGLpgREAHFMFCMDVDQHFSGTFGPEALAES-----VAQLHSWHYHWPSWLLPFERDAHSAAAMAWGQGDFYNH 254
Cdd:NF041524  74 FLKIKEEL--KEFDYLFFFNANALFVKPISAEILPTEeenglVGVIHPGYYNKPPIEYPYERRKKSTAYIPYGKGGYYFQ 151
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 122937275 255 AAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPaKVLSPEFCW 313
Cdd:NF041524 152 GGLNGGKTKAYLKLIETCSLNIEKDLKNNIIAIWHDESHLNKYFLDKKP-KILSPAYGY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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