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Conserved domains on  [gi|85986611|ref|NP_001034309|]
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uncharacterized protein C8orf48 homolog [Mus musculus]

Protein Classification

DUF4606 domain-containing protein( domain architecture ID 10634099)

DUF4606 domain-containing protein similar to Homo sapiens protein C8orf48

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4606 pfam15379
Domain of unknown function (DUF4606); This domain family is found in eukaryotes, and is ...
 175-277 8.87e-59

Domain of unknown function (DUF4606); This domain family is found in eukaryotes, and is approximately 100 amino acids in length.


:

Pssm-ID: 464687  Cd Length: 103  Bit Score: 182.95  E-value: 8.87e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85986611   175 CTIPDELWNRIYLENTRATLAYIGAITQHISSQCPSCNSKRAELAQSDFLRRRKTLLQSLLLQEKIDEHLHTTDFLTRVG 254
Cdd:pfam15379   1 CTVPDELVNRLYLKNMRETLKQASAAKQHQPSQCPSCNKKKAELAQSTFLRQKKTLLESLLLQEKIEEHLYTKDSLTLIG 80

                          90       100
                  ....*....|....*....|...
gi 85986611   255 EAHQGFPRLSDDPRIIWKRLTEK 277
Cdd:pfam15379  81 EIHQDLPRLSDDPRIIWKRLNEK 103
 
Name Accession Description Interval E-value
DUF4606 pfam15379
Domain of unknown function (DUF4606); This domain family is found in eukaryotes, and is ...
 175-277 8.87e-59

Domain of unknown function (DUF4606); This domain family is found in eukaryotes, and is approximately 100 amino acids in length.


Pssm-ID: 464687  Cd Length: 103  Bit Score: 182.95  E-value: 8.87e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85986611   175 CTIPDELWNRIYLENTRATLAYIGAITQHISSQCPSCNSKRAELAQSDFLRRRKTLLQSLLLQEKIDEHLHTTDFLTRVG 254
Cdd:pfam15379   1 CTVPDELVNRLYLKNMRETLKQASAAKQHQPSQCPSCNKKKAELAQSTFLRQKKTLLESLLLQEKIEEHLYTKDSLTLIG 80

                          90       100
                  ....*....|....*....|...
gi 85986611   255 EAHQGFPRLSDDPRIIWKRLTEK 277
Cdd:pfam15379  81 EIHQDLPRLSDDPRIIWKRLNEK 103
 
Name Accession Description Interval E-value
DUF4606 pfam15379
Domain of unknown function (DUF4606); This domain family is found in eukaryotes, and is ...
 175-277 8.87e-59

Domain of unknown function (DUF4606); This domain family is found in eukaryotes, and is approximately 100 amino acids in length.


Pssm-ID: 464687  Cd Length: 103  Bit Score: 182.95  E-value: 8.87e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85986611   175 CTIPDELWNRIYLENTRATLAYIGAITQHISSQCPSCNSKRAELAQSDFLRRRKTLLQSLLLQEKIDEHLHTTDFLTRVG 254
Cdd:pfam15379   1 CTVPDELVNRLYLKNMRETLKQASAAKQHQPSQCPSCNKKKAELAQSTFLRQKKTLLESLLLQEKIEEHLYTKDSLTLIG 80

                          90       100
                  ....*....|....*....|...
gi 85986611   255 EAHQGFPRLSDDPRIIWKRLTEK 277
Cdd:pfam15379  81 EIHQDLPRLSDDPRIIWKRLNEK 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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