NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|79329965|ref|NP_001032019|]
View 

aluminum activated malate transporter family protein [Arabidopsis thaliana]

Protein Classification

aluminum activated malate transporter family protein( domain architecture ID 12111291)

aluminum activated malate transporter family protein containing a fusaric acid resistance protein (FUSC_2) domain, similar to Arabidopsis thaliana aluminum-activated malate transporter

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ALMT pfam11744
Aluminium activated malate transporter;
40-487 0e+00

Aluminium activated malate transporter;


:

Pssm-ID: 432042 [Multi-domain]  Cd Length: 408  Bit Score: 536.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965    40 WKVGKDDPRRVKHALKVGVSLTLVSLLYLMEPLFKGIGNSAIWAVMTVVVVLEFS------------------------A 95
Cdd:pfam11744   1 WNFGKEDPRRVIHSLKVGLALTLVSLLYFMRPLYNGLGVNAVWAILTVVVVFEFSvgatlskglnrglatliagglafgV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965    96 EFVANDSGKIFRAIFIGAAVFIIGALITYLRFIPYIKKNYDYGMLIFLLTFNLITVSSYRVDTVIKIAHERFYTIAMGVG 175
Cdd:pfam11744  81 HHLASSSGKIGEPIVIGVSVFIIGFAATFSRFHPAIKARYDYGFRVFLLTFCLVTVSGYRTDEFIETAHQRFYTIAIGAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   176 ICLLMSLLVFPIWSGEDLHKSTVAKLQGLSYSIEACVN---EYFEEEEKDEETSDLSEDTIYNGYKTVLDSKSADEALAM 252
Cdd:pfam11744 161 ICLIVSIFIFPIWAGEDLHKLVAKNFEKLANSLEGCVNeylEEVEYERSILEYEDDSDDSLYNGYKSVLNSKSQEESLAN 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   253 YASWEPRHTRHCHRFPWKHYVKVGSVLRQFGYTVVALHGCLKTEIQTPRPLRGLFKDPCVRLAGEICKVLSELAASIRNR 332
Cdd:pfam11744 241 FAKWEPPHGRFRFRHPWKQYVKVGGALRHCAYTVMALHGCILSEIQAPPELRNKFKEECQRMSIESAKVLRELAESVKKM 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   333 RHCSP-EILSDSLQVALQDLNTAIKSQPKLFLGSSQngnvsqgnsgrhnpnvavsqhinkdtneaasyqntgtprgerms 411
Cdd:pfam11744 321 RKLSPiDILLDNVHVAAEELQSKLDSKSYLLLNSER-------------------------------------------- 356

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 79329965   412 rfgPNVSFsrlradtlerrsaaatnerkiLRQQLSRIVVLTSLEFSEALPFAAFASLLVEMVARLDNVIEEVEELG 487
Cdd:pfam11744 357 ---PSESF---------------------EPGQLDLIEVMKEYELSEALSLATFASLLIEFVARLDNIVEAVEELS 408
 
Name Accession Description Interval E-value
ALMT pfam11744
Aluminium activated malate transporter;
40-487 0e+00

Aluminium activated malate transporter;


Pssm-ID: 432042 [Multi-domain]  Cd Length: 408  Bit Score: 536.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965    40 WKVGKDDPRRVKHALKVGVSLTLVSLLYLMEPLFKGIGNSAIWAVMTVVVVLEFS------------------------A 95
Cdd:pfam11744   1 WNFGKEDPRRVIHSLKVGLALTLVSLLYFMRPLYNGLGVNAVWAILTVVVVFEFSvgatlskglnrglatliagglafgV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965    96 EFVANDSGKIFRAIFIGAAVFIIGALITYLRFIPYIKKNYDYGMLIFLLTFNLITVSSYRVDTVIKIAHERFYTIAMGVG 175
Cdd:pfam11744  81 HHLASSSGKIGEPIVIGVSVFIIGFAATFSRFHPAIKARYDYGFRVFLLTFCLVTVSGYRTDEFIETAHQRFYTIAIGAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   176 ICLLMSLLVFPIWSGEDLHKSTVAKLQGLSYSIEACVN---EYFEEEEKDEETSDLSEDTIYNGYKTVLDSKSADEALAM 252
Cdd:pfam11744 161 ICLIVSIFIFPIWAGEDLHKLVAKNFEKLANSLEGCVNeylEEVEYERSILEYEDDSDDSLYNGYKSVLNSKSQEESLAN 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   253 YASWEPRHTRHCHRFPWKHYVKVGSVLRQFGYTVVALHGCLKTEIQTPRPLRGLFKDPCVRLAGEICKVLSELAASIRNR 332
Cdd:pfam11744 241 FAKWEPPHGRFRFRHPWKQYVKVGGALRHCAYTVMALHGCILSEIQAPPELRNKFKEECQRMSIESAKVLRELAESVKKM 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   333 RHCSP-EILSDSLQVALQDLNTAIKSQPKLFLGSSQngnvsqgnsgrhnpnvavsqhinkdtneaasyqntgtprgerms 411
Cdd:pfam11744 321 RKLSPiDILLDNVHVAAEELQSKLDSKSYLLLNSER-------------------------------------------- 356

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 79329965   412 rfgPNVSFsrlradtlerrsaaatnerkiLRQQLSRIVVLTSLEFSEALPFAAFASLLVEMVARLDNVIEEVEELG 487
Cdd:pfam11744 357 ---PSESF---------------------EPGQLDLIEVMKEYELSEALSLATFASLLIEFVARLDNIVEAVEELS 408
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
46-195 8.01e-09

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 56.94  E-value: 8.01e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965  46 DPRRVKHALKVGVSLTLVSLLYLMEPLfkgigNSAIWAVMTVVVVL--EFSAEFVANdsgkIFRAI--FIGAavfIIGAL 121
Cdd:COG1289  43 DSPAFRHALRLALAALLALLIALLLGL-----PHPYWALLTVLIVLqpSYGATLSRA----LQRILgtLLGA---LAGLL 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965 122 ITYLRFIPYIKK---------------NYDYGMLIFLLTFNLITVSSYRVDTVIKIAHERFYTIAMGVGICLLMSLLVFP 186
Cdd:COG1289 111 LLALFPQPLLLLlalalvlglcffallTRSYAFALAGITAAVVLLFALLGPGVFDVALARVLDTLIGILIALLVSYLLWP 190


                ....*....
gi 79329965 187 IWSGEDLHK 195
Cdd:COG1289 191 RWARRRLRA 199
 
Name Accession Description Interval E-value
ALMT pfam11744
Aluminium activated malate transporter;
40-487 0e+00

Aluminium activated malate transporter;


Pssm-ID: 432042 [Multi-domain]  Cd Length: 408  Bit Score: 536.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965    40 WKVGKDDPRRVKHALKVGVSLTLVSLLYLMEPLFKGIGNSAIWAVMTVVVVLEFS------------------------A 95
Cdd:pfam11744   1 WNFGKEDPRRVIHSLKVGLALTLVSLLYFMRPLYNGLGVNAVWAILTVVVVFEFSvgatlskglnrglatliagglafgV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965    96 EFVANDSGKIFRAIFIGAAVFIIGALITYLRFIPYIKKNYDYGMLIFLLTFNLITVSSYRVDTVIKIAHERFYTIAMGVG 175
Cdd:pfam11744  81 HHLASSSGKIGEPIVIGVSVFIIGFAATFSRFHPAIKARYDYGFRVFLLTFCLVTVSGYRTDEFIETAHQRFYTIAIGAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   176 ICLLMSLLVFPIWSGEDLHKSTVAKLQGLSYSIEACVN---EYFEEEEKDEETSDLSEDTIYNGYKTVLDSKSADEALAM 252
Cdd:pfam11744 161 ICLIVSIFIFPIWAGEDLHKLVAKNFEKLANSLEGCVNeylEEVEYERSILEYEDDSDDSLYNGYKSVLNSKSQEESLAN 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   253 YASWEPRHTRHCHRFPWKHYVKVGSVLRQFGYTVVALHGCLKTEIQTPRPLRGLFKDPCVRLAGEICKVLSELAASIRNR 332
Cdd:pfam11744 241 FAKWEPPHGRFRFRHPWKQYVKVGGALRHCAYTVMALHGCILSEIQAPPELRNKFKEECQRMSIESAKVLRELAESVKKM 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965   333 RHCSP-EILSDSLQVALQDLNTAIKSQPKLFLGSSQngnvsqgnsgrhnpnvavsqhinkdtneaasyqntgtprgerms 411
Cdd:pfam11744 321 RKLSPiDILLDNVHVAAEELQSKLDSKSYLLLNSER-------------------------------------------- 356

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 79329965   412 rfgPNVSFsrlradtlerrsaaatnerkiLRQQLSRIVVLTSLEFSEALPFAAFASLLVEMVARLDNVIEEVEELG 487
Cdd:pfam11744 357 ---PSESF---------------------EPGQLDLIEVMKEYELSEALSLATFASLLIEFVARLDNIVEAVEELS 408
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
46-195 8.01e-09

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 56.94  E-value: 8.01e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965  46 DPRRVKHALKVGVSLTLVSLLYLMEPLfkgigNSAIWAVMTVVVVL--EFSAEFVANdsgkIFRAI--FIGAavfIIGAL 121
Cdd:COG1289  43 DSPAFRHALRLALAALLALLIALLLGL-----PHPYWALLTVLIVLqpSYGATLSRA----LQRILgtLLGA---LAGLL 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79329965 122 ITYLRFIPYIKK---------------NYDYGMLIFLLTFNLITVSSYRVDTVIKIAHERFYTIAMGVGICLLMSLLVFP 186
Cdd:COG1289 111 LLALFPQPLLLLlalalvlglcffallTRSYAFALAGITAAVVLLFALLGPGVFDVALARVLDTLIGILIALLVSYLLWP 190


                ....*....
gi 79329965 187 IWSGEDLHK 195
Cdd:COG1289 191 RWARRRLRA 199
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH