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Conserved domains on  [gi|79328857|ref|NP_001031955|]
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folate receptor family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Folate_rec super family cl03844
Folate receptor family; This family includes the folate receptor which binds to folate and ...
 85-152 4.90e-11

Folate receptor family; This family includes the folate receptor which binds to folate and reduced folic acid derivatives and mediates delivery of 5-methyltetrahydrofolate to the interior of cells. These proteins are attached to the membrane by a GPI-anchor. The proteins contain 16 conserved cysteines that form eight disulphide bridges.


The actual alignment was detected with superfamily member pfam03024:

Pssm-ID: 397250  Cd Length: 172  Bit Score: 60.17  E-value: 4.90e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79328857    85 CNPNVG--IQPGP------PRICASFCDRVFEACKDAYFASNALKRVI----GPCGVNDDIICIKASNWESNGTSFCEAA 152
Cdd:pfam03024  74 CSPNLGpwIQPWRrerilnVPLCKEFCDAWFEACKDDYTCKSNWGKGWlwssGKNGCPDEPSCRPFKQMFPNGTDLCESI 153
 
Name Accession Description Interval E-value
Folate_rec pfam03024
Folate receptor family; This family includes the folate receptor which binds to folate and ...
 85-152 4.90e-11

Folate receptor family; This family includes the folate receptor which binds to folate and reduced folic acid derivatives and mediates delivery of 5-methyltetrahydrofolate to the interior of cells. These proteins are attached to the membrane by a GPI-anchor. The proteins contain 16 conserved cysteines that form eight disulphide bridges.


Pssm-ID: 397250  Cd Length: 172  Bit Score: 60.17  E-value: 4.90e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79328857    85 CNPNVG--IQPGP------PRICASFCDRVFEACKDAYFASNALKRVI----GPCGVNDDIICIKASNWESNGTSFCEAA 152
Cdd:pfam03024  74 CSPNLGpwIQPWRrerilnVPLCKEFCDAWFEACKDDYTCKSNWGKGWlwssGKNGCPDEPSCRPFKQMFPNGTDLCESI 153
 
Name Accession Description Interval E-value
Folate_rec pfam03024
Folate receptor family; This family includes the folate receptor which binds to folate and ...
 85-152 4.90e-11

Folate receptor family; This family includes the folate receptor which binds to folate and reduced folic acid derivatives and mediates delivery of 5-methyltetrahydrofolate to the interior of cells. These proteins are attached to the membrane by a GPI-anchor. The proteins contain 16 conserved cysteines that form eight disulphide bridges.


Pssm-ID: 397250  Cd Length: 172  Bit Score: 60.17  E-value: 4.90e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79328857    85 CNPNVG--IQPGP------PRICASFCDRVFEACKDAYFASNALKRVI----GPCGVNDDIICIKASNWESNGTSFCEAA 152
Cdd:pfam03024  74 CSPNLGpwIQPWRrerilnVPLCKEFCDAWFEACKDDYTCKSNWGKGWlwssGKNGCPDEPSCRPFKQMFPNGTDLCESI 153
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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