|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
37-711 |
4.46e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 4.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 37 FVKVEKEGINKKYDDDDDEKAEKQLKSLEDALQLHDVKHKELTEVKEAfdgLGLELENSRKKMIELEDRIRisalEAEKL 116
Cdd:TIGR02168 217 ELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQE---LEEKLEELRLEVSELEEEIE----ELQKE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 117 EELQKQSASELEEKLKISDERyskTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEgkkssiqMQEYQEK 196
Cdd:TIGR02168 290 LYALANEISRLEQQKQILRER---LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEE-------LESLEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 197 VSKLESSLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEAT 276
Cdd:TIGR02168 360 LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQ 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 277 LSVAMEKE--RDLSENLNAVMEKLKSSEERLEKQAREIDEAttrsiELEALHKHSELKVQKTM-EDFSSRDTEAKSLTEK 353
Cdd:TIGR02168 440 AELEELEEelEELQEELERLEEALEELREELEEAEQALDAA-----ERELAQLQARLDSLERLqENLEGFSEGVKALLKN 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 354 SKDLE-------EKIRV---YEGKLAEACGQSLSLQEELDQSSAENELLADTNNQL-KIKIQEL----EGYLDSEKETAI 418
Cdd:TIGR02168 515 QSGLSgilgvlsELISVdegYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELgRVTFLPLdsikGTEIQGNDREIL 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 419 EKLNQKDTEAKDLITKLKSHENVIEEHKRQVL----------------------------------------EASGVADT 458
Cdd:TIGR02168 595 KNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvvddldnalelakklrpgyrivtldgdlvrpggvitggsaKTNSSILE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 459 RKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEkYQQAKELQITIEDLTKQLT 538
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD-LARLEAEVEQLEERIAQLS 753
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 539 SERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKsksDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEV 618
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK---EELKALREALDELRAELTLLNEEAANLRERLESLE 830
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 619 EKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKL 698
Cdd:TIGR02168 831 RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR 910
|
730
....*....|...
gi 145322975 699 NELEQKVKLADAK 711
Cdd:TIGR02168 911 SELRRELEELREK 923
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
37-725 |
8.18e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.40 E-value: 8.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 37 FVKVEKEGINKKYDDDDDEKAEKQLKSLEDALQLHDVKhKELTEVKEAFDGLGLELENSRKKMIELEDRI--------RI 108
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDELAEELAELE-EKLEELKEELESLEAELEELEAELEELESRLeeleeqleTL 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 109 SALEAEKLEELQKQSA--SELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKS--LEELSEKVSELKSALIVAEEEGK 184
Cdd:TIGR02168 385 RSKVAQLELQIASLNNeiERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQaeLEELEEELEELQEELERLEEALE 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 185 KSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRialQKGAEHEDIGNVSTKRSVELQGLFQTSQL-----KLEKAEEK 259
Cdd:TIGR02168 465 ELREELEEAEQALDAAERELAQLQARLDSLERLQE---NLEGFSEGVKALLKNQSGLSGILGVLSELisvdeGYEAAIEA 541
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 260 L--KDLEAIQVKNSSlEATLSVAMEKERDLSenLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTM 337
Cdd:TIGR02168 542 AlgGRLQAVVVENLN-AAKKAIAFLKQNELG--RVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAL 618
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 338 EDFSSRDTEAKSLTE-----KSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENelladtnnqlKIKIQELEgyldS 412
Cdd:TIGR02168 619 SYLLGGVLVVDDLDNalelaKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILER----------RREIEELE----E 684
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 413 EKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNI 492
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIE 764
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 493 KLNQKLanqgsetddfqAKLSVLEAEKYQQAKELQITIEDLTKQLTSererLRSQISSLEEEKNQVNEIYQSTKNELVKL 572
Cdd:TIGR02168 765 ELEERL-----------EEAEEELAEAEAEIEELEAQIEQLKEELKA----LREALDELRAELTLLNEEAANLRERLESL 829
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 573 QAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRdvLEEKAIQLHKel 652
Cdd:TIGR02168 830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE--LEELSEELRE-- 905
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 145322975 653 qashtaISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNElEQKVKLADAKSKETESTGKEEEVE 725
Cdd:TIGR02168 906 ------LESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSE-EYSLTLEEAEALENKIEDDEEEAR 971
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
56-664 |
8.01e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 8.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 56 KAEKQLKSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAEKLEE----------LQKQSAS 125
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELeleeaqaeeyELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 126 ELEEKLKISDERYSKTDALLSQALSQNSVLEQKLkslEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLN 205
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEEL---EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 206 QSSARNSELEEDLRIALQKGAEHEdignvstKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKER 285
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELA-------AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 286 DLSENLNAVMEKLKSSEERLEKQAREIDEAtTRSIELEALHKHSELKVQKTMEDfssrDTEAKSLTEKSKDLEEKIRVYE 365
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAA-LAELLEELAEAAARLLLLLEAEA----DYEGFLEGVKAALLLAGLRGLA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 366 GKLAEAcgQSLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLnqkdteAKDLITKLKSHENVIEEH 445
Cdd:COG1196 524 GAVAVL--IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFL------PLDKIRARAALAAALARG 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 446 KRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGdlaevnIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKE 525
Cdd:COG1196 596 AIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAA------LRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 526 LQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLEs 605
Cdd:COG1196 670 LLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL- 748
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 145322975 606 kfEQVEIHLKEEVEKVAELTSKLQEHKhkaSDRDVLEE---KAIQLHKELQASHTAISEQKE 664
Cdd:COG1196 749 --EEEALEELPEPPDLEELERELERLE---REIEALGPvnlLAIEEYEELEERYDFLSEQRE 805
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
58-688 |
1.42e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.96 E-value: 1.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 58 EKQLKSL----EDALqlhdvKHKELTEVKEAFDG--LGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEkl 131
Cdd:COG1196 199 ERQLEPLerqaEKAE-----RYRELKEELKELEAelLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEE-- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 132 kisderysktdaLLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARN 211
Cdd:COG1196 272 ------------LRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 212 SELEEDLRialqkgaehedignvstkrsvELQGLFQTSQLKLEKAEEKLKDLEAIQVKN----SSLEATLSVAMEKERDL 287
Cdd:COG1196 340 EELEEELE---------------------EAEEELEEAEAELAEAEEALLEAEAELAEAeeelEELAEELLEALRAAAEL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 288 SENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGK 367
Cdd:COG1196 399 AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 368 LAEacgqslsLQEELDQSSAENELLADTnnqlkikIQELEGYLDSEKETAIEKLNQKDTEA-KDLITKLKSHENVIEEHK 446
Cdd:COG1196 479 LAE-------LLEELAEAAARLLLLLEA-------EADYEGFLEGVKAALLLAGLRGLAGAvAVLIGVEAAYEAALEAAL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 447 RQVLEASGVADTRKVEVEEALLK--------------LNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKL 512
Cdd:COG1196 545 AAALQNIVVEDDEVAAAAIEYLKaakagratflpldkIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLG 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 513 SVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEK 592
Cdd:COG1196 625 RTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEE 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 593 LSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKAS------------DRDVLEEKAIQLHKELQA------ 654
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLeeealeelpeppDLEELERELERLEREIEAlgpvnl 784
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 145322975 655 ----SHTAISEQKEALSHKHSELE---ATLKKSQEELDAKK 688
Cdd:COG1196 785 laieEYEELEERYDFLSEQREDLEearETLEEAIEEIDRET 825
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
55-593 |
2.27e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 55 EKAEKQLKSLEDALQLHDVKHKELTEvkeAFDGLGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKIS 134
Cdd:COG1196 256 EELEAELAELEAELEELRLELEELEL---ELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 135 DERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSEL 214
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 215 EEDLRIALQKGAEHEDignvstKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAV 294
Cdd:COG1196 413 LERLERLEEELEELEE------ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 295 MEklKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQ 374
Cdd:COG1196 487 AE--AAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIE 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 375 SLSLQEEldqsSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASG 454
Cdd:COG1196 565 YLKAAKA----GRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAV 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 455 VADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLT 534
Cdd:COG1196 641 TLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEE 720
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 145322975 535 KQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKL 593
Cdd:COG1196 721 LEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
252-599 |
2.37e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 2.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 252 KLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDlsenlnavmEKLKSSEERLEKQAREIDEATTRSIELEALHKHSEL 331
Cdd:TIGR02168 204 SLERQAEKAERYKELKAELRELELALLVLRLEELR---------EELEELQEELKEAEEELEELTAELQELEEKLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 332 KVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLD 411
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 412 SEKEtaieklnqkdteakdlitKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEvn 491
Cdd:TIGR02168 355 SLEA------------------ELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED-- 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 492 iklnqKLANQGSETDDFQAKLSVLEAEKYQQAKElqiTIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVK 571
Cdd:TIGR02168 415 -----RRERLQQEIEELLKKLEEAELKELQAELE---ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340
....*....|....*....|....*...
gi 145322975 572 LQAQLQVDKsksdDMVSQIEKLSALVAE 599
Cdd:TIGR02168 487 LQARLDSLE----RLQENLEGFSEGVKA 510
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
55-749 |
4.27e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.54 E-value: 4.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 55 EKAEKQLKSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIELEDR-----IRISALEAEK--LEELQKQSASEL 127
Cdd:TIGR02168 239 EELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKElyalaNEISRLEQQKqiLRERLANLERQL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 128 EEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQS 207
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 208 SARNSELEEDL-RIALQKGAEHEDIGNVSTKRSV----ELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAME 282
Cdd:TIGR02168 399 NNEIERLEARLeRLEDRRERLQQEIEELLKKLEEaelkELQAELEELEEELEELQEELERLEEALEELREELEEAEQALD 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 283 KERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKH--SELKVQK-----------------TMEDFSSR 343
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVlsELISVDEgyeaaieaalggrlqavVVENLNAA 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 344 DTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELEG--YLDSEKETAIEKL 421
Cdd:TIGR02168 559 KKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGgvLVVDDLDNALELA 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 422 NQKD------TEAKDLITK-------LKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLA 488
Cdd:TIGR02168 639 KKLRpgyrivTLDGDLVRPggvitggSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLR 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 489 EVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTK------QLTSERERLRSQISSLEEEKNQVNEIY 562
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEleerleEAEEELAEAEAEIEELEAQIEQLKEEL 798
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 563 QSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLE 642
Cdd:TIGR02168 799 KALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 643 EKAIQLHKELQASHtaiSEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVK-LADAKSKETESTGKE 721
Cdd:TIGR02168 879 LNERASLEEALALL---RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDnLQERLSEEYSLTLEE 955
|
730 740
....*....|....*....|....*...
gi 145322975 722 EEVEVKSRDSDLSFSNPKQTKIKKNLDA 749
Cdd:TIGR02168 956 AEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
399-713 |
4.81e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 4.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 399 LKIKIQELEGYLDS---EKETAiEKLNQKDTEAKDLITKLKSHEnvIEEHKRQVLEASGVADTRKVEVEEALLKLNTLES 475
Cdd:COG1196 191 LEDILGELERQLEPlerQAEKA-ERYRELKEELKELEAELLLLK--LRELEAELEELEAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 476 TIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEK---YQQAKELQITIEDLTKQLTSERERLRSQISSLE 552
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRrelEERLEELEEELAELEEELEELEEELEELEEELE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 553 EEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHK 632
Cdd:COG1196 348 EAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 633 HKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKS 712
Cdd:COG1196 428 EALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFL 507
|
.
gi 145322975 713 K 713
Cdd:COG1196 508 E 508
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
194-725 |
1.11e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.26 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 194 QEKVSKLESSLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSL 273
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 274 EATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEK 353
Cdd:COG1196 301 EQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 354 SKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELEgyldSEKETAIEKLNQKDTEAKDLIT 433
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELE----EEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 434 KLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLS 513
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 514 VLEAEKYQQAKELQITIED---LTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDksksDDMVSQI 590
Cdd:COG1196 537 EAALEAALAAALQNIVVEDdevAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVA----SDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 591 EKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKH 670
Cdd:COG1196 613 ARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEE 692
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 145322975 671 SELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVE 725
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEEL 747
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
20-726 |
1.11e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 20 EDTVMEKEEEDTIFDGGFVKVEKEGINKKYDDDDDEKAEKQLKSLEDALQLHDVKHKEltEVKEAFDGLGLELENSRKKM 99
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAE--DARKAEEARKAEDAKRVEIA 1157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 100 IELEDRIRISalEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQnsvlEQKLKSLEELSEKVSELKSALIVA 179
Cdd:PTZ00121 1158 RKAEDARKAE--EARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARK----AEEERKAEEARKAEDAKKAEAVKK 1231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 180 EEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVElqglfqtsqlKLEKAEEK 259
Cdd:PTZ00121 1232 AEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKAD----------EAKKAEEK 1301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 260 LKDLEAiqvKNSSLEAtlSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMED 339
Cdd:PTZ00121 1302 KKADEA---KKKAEEA--KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA 1376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 340 FSSRDTEAKSLTEKSKDLEEKIRVYEGKlaeacgqslSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIE 419
Cdd:PTZ00121 1377 KKKADAAKKKAEEKKKADEAKKKAEEDK---------KKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKAD 1447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 420 KLNQKDTEAKDLIT-KLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEK-ENGDLAEVNIKLNQ- 496
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEaKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKaDEAKKAEEAKKADEa 1527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 497 KLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQL 576
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 577 QVDKSKSDDMvsqiEKLSALVAEKSVLESK-FEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQAS 655
Cdd:PTZ00121 1608 KAEEAKKAEE----AKIKAEELKKAEEEKKkVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKA 1683
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 145322975 656 HTAISEQKEALSHKHSELEAT--LKKSQEELDAKKSvivhlESKLNELEQKVKLADAKSKETESTGKEEEVEV 726
Cdd:PTZ00121 1684 EEDEKKAAEALKKEAEEAKKAeeLKKKEAEEKKKAE-----ELKKAEEENKIKAEEAKKEAEEDKKKAEEAKK 1751
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
57-561 |
2.27e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.21 E-value: 2.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 57 AEKQLKSLEDALQLHDVKHKELTEVKEAFDGlglELENSRKKMIELEDRIrisALEAEKLEELQkqsasELEEklKISDE 136
Cdd:PRK02224 197 EEKEEKDLHERLNGLESELAELDEEIERYEE---QREQARETRDEADEVL---EEHEERREELE-----TLEA--EIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 137 RYSKTDALLSQALSQNSVLEQKlKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEE 216
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLR-ERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 217 DLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVME 296
Cdd:PRK02224 343 EAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERD 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 297 KLKSSEERLEKQAREIDEATTRSIELEALHKHSE----LKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEAc 372
Cdd:PRK02224 423 ELREREAELEATLRTARERVEEAEALLEAGKCPEcgqpVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERA- 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 373 gqslslqEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKetaiEKLNQKDTEAKDLITKLKSHENV---IEEHKRQV 449
Cdd:PRK02224 502 -------EDLVEAEDRIERLEERREDLEELIAERRETIEEKR----ERAEELRERAAELEAEAEEKREAaaeAEEEAEEA 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 450 LEASGVADTRKVEVEEALLKLNTLES----------TIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKL---SVLE 516
Cdd:PRK02224 571 REEVAELNSKLAELKERIESLERIRTllaaiadaedEIERLREKREALAELNDERRERLAEKRERKRELEAEFdeaRIEE 650
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 145322975 517 A-EKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEI 561
Cdd:PRK02224 651 ArEDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEEL 696
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
59-726 |
2.38e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 2.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 59 KQLKSLEDAlQLHDVKHKELTEVKEAFDG--LGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKISDE 136
Cdd:TIGR02169 198 QQLERLRRE-REKAERYQALLKEKREYEGyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 137 RYSKTDALLSQalSQNSVLEQklksLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEE 216
Cdd:TIGR02169 277 LNKKIKDLGEE--EQLRVKEK----IGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 217 DLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDL----EAIQVKNSSLEATLSVAMEKERDLSENLN 292
Cdd:TIGR02169 351 RRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLkreiNELKRELDRLQEELQRLSEELADLNAAIA 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 293 AVMEKLKSSEERLEKQAREIDEATTrsielealhkhselKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEAC 372
Cdd:TIGR02169 431 GIEAKINELEEEKEDKALEIKKQEW--------------KLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 373 GQSLSLQEELDQSSAENELLADTNNQLKIKIQELEGYlDSEKETAIE-----KLN----QKDTEAKDLITKLKSHE---- 439
Cdd:TIGR02169 497 AQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSV-GERYATAIEvaagnRLNnvvvEDDAVAKEAIELLKRRKagra 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 440 ----------------------------NVIE-EHKRQVLEASGVADTRKVEVEEA------LLKLNTLESTIEELE--- 481
Cdd:TIGR02169 576 tflplnkmrderrdlsilsedgvigfavDLVEfDPKYEPAFKYVFGDTLVVEDIEAarrlmgKYRMVTLEGELFEKSgam 655
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 482 ----KENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKY---QQAKELQITIEDLTKQLtserERLRSQISSLEEE 554
Cdd:TIGR02169 656 tggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRrieNRLDELSQELSDASRKI----GEIEKEIEQLEQE 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 555 KNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVA---------EKSVLESKFEQVEIHLKEEVEKVAELT 625
Cdd:TIGR02169 732 EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHkleealndlEARLSHSRIPEIQAELSKLEEEVSRIE 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 626 SKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKV 705
Cdd:TIGR02169 812 ARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKER 891
|
730 740
....*....|....*....|.
gi 145322975 706 KLADAKSKETESTGKEEEVEV 726
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQI 912
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
101-728 |
2.78e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.84 E-value: 2.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 101 ELEDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLE----ELSEKVSELKSAL 176
Cdd:TIGR02168 197 ELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTaelqELEEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 177 IVAEEEGKKSSIQMQEYQEKVSKLES-------SLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQTS 249
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISRLEQqkqilreRLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 250 QLKLEKAEEKLKDLEAiqvKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEAlhKHS 329
Cdd:TIGR02168 357 EAELEELEAELEELES---RLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLK--KLE 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 330 ELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNN----------QL 399
Cdd:TIGR02168 432 EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEnlegfsegvkAL 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 400 KIKIQELEGYL---------DSEKETAIEK---------LNQKDTEAKDLITKLKSHEnvieEHKRQVLEASGVADTRKV 461
Cdd:TIGR02168 512 LKNQSGLSGILgvlselisvDEGYEAAIEAalggrlqavVVENLNAAKKAIAFLKQNE----LGRVTFLPLDSIKGTEIQ 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 462 EVEEALLK--------LNTLESTIEELEK------------ENGDLAEVNIKLNQKLANQGSETDDFQAKLSVL---EAE 518
Cdd:TIGR02168 588 GNDREILKniegflgvAKDLVKFDPKLRKalsyllggvlvvDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVItggSAK 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 519 KYQQAKELQITIEDLTKQLtserERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQvdksksddmvSQIEKLSALVA 598
Cdd:TIGR02168 668 TNSSILERRREIEELEEKI----EELEEKIAELEKALAELRKELEELEEELEQLRKELE----------ELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 599 EKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLK 678
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 145322975 679 KSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVEVKS 728
Cdd:TIGR02168 814 LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE 863
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
376-695 |
1.18e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 376 LSLQEELDQSSAENELLADTNNQLKI-KIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASG 454
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELeELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 455 VADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLT 534
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 535 KQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHL 614
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 615 KEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQAshtaiseQKEALSHKHSELEATLKKSQEELDAKKSVIVHL 694
Cdd:COG1196 456 EEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL-------LLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV 528
|
.
gi 145322975 695 E 695
Cdd:COG1196 529 L 529
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
120-483 |
1.93e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.14 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 120 QKQSASELEEKLKisderysktdALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSK 199
Cdd:TIGR02168 675 RRREIEELEEKIE----------ELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 200 LESSLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQvknSSLEATLSV 279
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL---TLLNEEAAN 821
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 280 AMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEE 359
Cdd:TIGR02168 822 LRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSE 901
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 360 KIRVYEGKLAEACGQSLSLQEELDQSSAENElladtnnQLKIKIQELEGYLDSE----KETAIEKLNQKDTEAKDLITKL 435
Cdd:TIGR02168 902 ELRELESKRSELRRELEELREKLAQLELRLE-------GLEVRIDNLQERLSEEysltLEEAEALENKIEDDEEEARRRL 974
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 145322975 436 KSHENVIEEHKRQVLEA-------SGVADTRKVEVEEALLKLNTLESTIEELEKE 483
Cdd:TIGR02168 975 KRLENKIKELGPVNLAAieeyeelKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
47-630 |
1.02e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.84 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 47 KKYDDDDDEKAEKQLKSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASe 126
Cdd:PRK03918 171 IKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELES- 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 127 LEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKvselksalivaEEEGKKSSIQMQEYQEKVSKLESSLNQ 206
Cdd:PRK03918 250 LEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEK-----------AEEYIKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 207 SSARNSELEEDLRIALQKGAEHEdignvstkrsvELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATlsvameKERD 286
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERLE-----------ELKKKLKELEKRLEELEERHELYEEAKAKKEELERL------KKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 287 LSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKdlEEKIRVYeg 366
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHR--KELLEEY-- 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 367 klaeacgqslslQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKEtaIEKLNQKDTEAKDLITKLKSHENVIEEHK 446
Cdd:PRK03918 458 ------------TAELKRIEKELKEIEEKERKLRKELRELEKVLKKESE--LIKLKELAEQLKELEEKLKKYNLEELEKK 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 447 ----RQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSET-DDFQAKLSVLEA--EK 519
Cdd:PRK03918 524 aeeyEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESvEELEERLKELEPfyNE 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 520 YQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIyqstKNELVKLQAQLQVD--KSKSDDMVSQIEKLSALV 597
Cdd:PRK03918 604 YLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEEL----RKELEELEKKYSEEeyEELREEYLELSRELAGLR 679
|
570 580 590
....*....|....*....|....*....|...
gi 145322975 598 AEKSVLESKFEQVEIHLKEEVEKVAELTSKLQE 630
Cdd:PRK03918 680 AELEELEKRREEIKKTLEKLKEELEEREKAKKE 712
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
155-752 |
3.02e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 155 LEQKLKSLEELSEKVSELKSalIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEdlrialqkgaehedignv 234
Cdd:TIGR02168 198 LERQLKSLERQAEKAERYKE--LKAELRELELALLVLRLEELREELEELQEELKEAEEELEE------------------ 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 235 STKRSVELQGLFQTSQLKLEKAEEKLkdlEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDE 314
Cdd:TIGR02168 258 LTAELQELEEKLEELRLEVSELEEEI---EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 315 ATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLAD 394
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 395 TNNQLKIKIQELEGYLDS-EKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTL 473
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEaELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 474 ESTIEELEKENGDLAEVniklnqkLANQGSETDDFQAKLSVLE-AEKYQQAKELQITiEDLTKQLTSERERLRSQISSLE 552
Cdd:TIGR02168 495 ERLQENLEGFSEGVKAL-------LKNQSGLSGILGVLSELISvDEGYEAAIEAALG-GRLQAVVVENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 553 E------------------------EKNQVNEIYQSTKNELVKLQAQLQV-------------DKSKSDDMVSQIEKLSA 595
Cdd:TIGR02168 567 QnelgrvtflpldsikgteiqgndrEILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvdDLDNALELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 596 LVAEKSVL----------ESKFEQVEIHLKEEVEkvaELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEA 665
Cdd:TIGR02168 647 IVTLDGDLvrpggvitggSAKTNSSILERRREIE---ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEE 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 666 LSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVEVKSRDSDLSFSNPKQTKIKK 745
Cdd:TIGR02168 724 LSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803
|
....*..
gi 145322975 746 NLDAASS 752
Cdd:TIGR02168 804 ALDELRA 810
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3-725 |
3.16e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.38 E-value: 3.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 3 EATKVSSDVPQAKEVTKEDTVMEKEEEDtifdggfvKVEKEGINKKYDDDDDEKAEKQLKSLEDALQlhdvKHKELTEVK 82
Cdd:PTZ00121 1179 EAARKAEEVRKAEELRKAEDARKAEAAR--------KAEEERKAEEARKAEDAKKAEAVKKAEEAKK----DAEEAKKAE 1246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 83 EAFDGLGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKISDERySKTDALLSQALSQNSVLEQKLKSl 162
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEK-KKADEAKKKAEEAKKADEAKKKA- 1324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 163 EELSEKVSELKSAlivAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIA--LQKGAEHEDIGNVSTKRSV 240
Cdd:PTZ00121 1325 EEAKKKADAAKKK---AEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKAdaAKKKAEEKKKADEAKKKAE 1401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 241 ELQGLFQTSQLKLE----------KAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEK--Q 308
Cdd:PTZ00121 1402 EDKKKADELKKAAAakkkadeakkKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKaeE 1481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 309 AREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAE 388
Cdd:PTZ00121 1482 AKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAE 1561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 389 NELLADTNNQL------------------KIKIQELEGYLDSEKETAIEKLnQKDTEAKDLITKLKSHENV---IEEHKR 447
Cdd:PTZ00121 1562 EKKKAEEAKKAeedknmalrkaeeakkaeEARIEEVMKLYEEEKKMKAEEA-KKAEEAKIKAEELKKAEEEkkkVEQLKK 1640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 448 QVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDL--AEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKE 525
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAkkAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE 1720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 526 LQITIED---LTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSV 602
Cdd:PTZ00121 1721 LKKAEEEnkiKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 603 --LESKFEQVEIHLKEE---VEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATL 677
Cdd:PTZ00121 1801 kdIFDNFANIIEGGKEGnlvINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDD 1880
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 145322975 678 KKSQEELDAKKSVivhlesKLNELEQKVKLADAKSKETESTGKEEEVE 725
Cdd:PTZ00121 1881 EEEIEEADEIEKI------DKDDIEREIPNNNMAGKNNDIIDDKLDKD 1922
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
252-725 |
5.55e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.14 E-value: 5.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 252 KLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLE------KQAREIDEATTRSIELEAL 325
Cdd:PRK03918 222 ELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEeleekvKELKELKEKAEEYIKLSEF 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 326 HKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKirvyegklAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQE 405
Cdd:PRK03918 302 YEEYLDELREIEKRLSRLEEEINGIEERIKELEEK--------EERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 406 LEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKEng 485
Cdd:PRK03918 374 LERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRK-- 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 486 dlaEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELqitiedltkqltSERERLRSQISSLEEEKNQVNEIYQST 565
Cdd:PRK03918 452 ---ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVL------------KKESELIKLKELAEQLKELEEKLKKYN 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 566 KNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKA 645
Cdd:PRK03918 517 LEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKE 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 646 IQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVE 725
Cdd:PRK03918 597 LEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELA 676
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
2-569 |
7.02e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 7.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 2 EEATKVSSDVPQAKEVTKEDTVMEKEEEDTIFDGGFVKVEKEGINKKYDDDDDEKAEKQLKSLEDALQLHDVKHKELTEV 81
Cdd:PTZ00121 1325 EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK 1404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 82 KEAFDGLGLE-----LENSRKKMIELE--DRIRISALEAEKLEELQKQSASELE-EKLKISDERYSKTDALLSQALSQNS 153
Cdd:PTZ00121 1405 KKADELKKAAaakkkADEAKKKAEEKKkaDEAKKKAEEAKKADEAKKKAEEAKKaEEAKKKAEEAKKADEAKKKAEEAKK 1484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 154 VLEQKLKSlEELSEKVSELKSAlivAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAEHEDIGN 233
Cdd:PTZ00121 1485 ADEAKKKA-EEAKKKADEAKKA---AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 234 VSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREID 313
Cdd:PTZ00121 1561 EEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKK 1640
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 314 EATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYE--GKLAEACGQSLSLQEELDQSSAENEL 391
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEalKKEAEEAKKAEELKKKEAEEKKKAEE 1720
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 392 LADTNNQLKIKIQELEGYLDSEKETAIEKlnQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRkvevEEALLKLN 471
Cdd:PTZ00121 1721 LKKAEEENKIKAEEAKKEAEEDKKKAEEA--KKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD----EEDEKRRM 1794
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 472 TLESTIEELEKENGDLAEVNiKLNQKLANQGSETDDFQAKLSVL-------EAEKYQQAKELQITIEDLTKQLTSERERL 544
Cdd:PTZ00121 1795 EVDKKIKDIFDNFANIIEGG-KEGNLVINDSKEMEDSAIKEVADsknmqleEADAFEKHKFNKNNENGEDGNKEADFNKE 1873
|
570 580
....*....|....*....|....*
gi 145322975 545 RSQISSLEEEKNQVNEIYQSTKNEL 569
Cdd:PTZ00121 1874 KDLKEDDEEEIEEADEIEKIDKDDI 1898
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3-748 |
7.58e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 7.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 3 EATKVSSDVPQAKEVTKEDTVMEKEEEDTIFDGGFVKVEKEGINKKYDDDDDEKAEK-----QLKSLEDALQLHDVKHKE 77
Cdd:PTZ00121 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEernneEIRKFEEARMAHFARRQA 1270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 78 LTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQ 157
Cdd:PTZ00121 1271 AIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKA 1350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 158 KLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEdlriaLQKGAEHEdignvstK 237
Cdd:PTZ00121 1351 EAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADE-----LKKAAAAK-------K 1418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 238 RSVELQglfqtsqlklEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEErLEKQAREIDEAtt 317
Cdd:PTZ00121 1419 KADEAK----------KKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE-AKKKAEEAKKA-- 1485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 318 rsielEALHKHSELKVQKTMEdfSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAEnelladtnn 397
Cdd:PTZ00121 1486 -----DEAKKKAEEAKKKADE--AKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD--------- 1549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 398 qlkikiqELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTI 477
Cdd:PTZ00121 1550 -------ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKA 1622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 478 EELEK--ENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTKQLTSERERlRSQISSLEEEK 555
Cdd:PTZ00121 1623 EELKKaeEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKA-AEALKKEAEEA 1701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 556 NQVNEIYQSTKNELVK---LQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEiHLKEEVEKVAELTSKLQEhk 632
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKKaeeLKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIA-HLKKEEEKKAEEIRKEKE-- 1778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 633 hkASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQE-ELDAKKSVIVHLESKLNELEQKVKLADAK 711
Cdd:PTZ00121 1779 --AVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEmEDSAIKEVADSKNMQLEEADAFEKHKFNK 1856
|
730 740 750
....*....|....*....|....*....|....*...
gi 145322975 712 SKETESTGKEEEVEVKSRDSDLSF-SNPKQTKIKKNLD 748
Cdd:PTZ00121 1857 NNENGEDGNKEADFNKEKDLKEDDeEEIEEADEIEKID 1894
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
155-714 |
1.23e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 155 LEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEdlrIALQKGAEHEDIGNV 234
Cdd:PRK03918 181 LEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEE---LEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 235 STKRSvELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEaTLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDE 314
Cdd:PRK03918 258 EEKIR-ELEERIEELKKEIEELEEKVKELKELKEKAEEYI-KLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 315 ATTRSIELEALHKHSELKVQKtMEDFSSRDTEAKSLTEKSKDLEEKIRVY-----EGKLAEACGQSLSLQEELDQSSAEN 389
Cdd:PRK03918 336 KEERLEELKKKLKELEKRLEE-LEERHELYEEAKAKKEELERLKKRLTGLtpeklEKELEELEKAKEEIEEEISKITARI 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 390 ELLADTNNQLKIKIQELEGyldSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLK 469
Cdd:PRK03918 415 GELKKEIKELKKAIEELKK---AKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKK 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 470 ---LNTLESTIEELEKENGDLAEVNIKlnqKLANQGSETDDFQAKLSVLEAEKYQQAKELQiTIEDLTKQLTSERERLRS 546
Cdd:PRK03918 492 eseLIKLKELAEQLKELEEKLKKYNLE---ELEKKAEEYEKLKEKLIKLKGEIKSLKKELE-KLEELKKKLAELEKKLDE 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 547 QISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTS 626
Cdd:PRK03918 568 LEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRK 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 627 KLQEHKHKASDRDvlEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLE------SKLNE 700
Cdd:PRK03918 648 ELEELEKKYSEEE--YEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEklekalERVEE 725
|
570
....*....|....
gi 145322975 701 LEQKVKLADAKSKE 714
Cdd:PRK03918 726 LREKVKKYKALLKE 739
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
267-730 |
1.30e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.96 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 267 QVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQK--TMEDFSSRD 344
Cdd:PRK02224 184 DQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREEleTLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 345 TEAKSLTEKSKD-LEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQ 423
Cdd:PRK02224 264 RETIAETEREREeLAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 424 KDTEAKDlitkLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGS 503
Cdd:PRK02224 344 AESLRED----ADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELRE 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 504 ETDDFQAKLSVLEA------EKYQQAKELQ------------------ITIEDLTKQ---LTSERERLRSQISSLEEEKN 556
Cdd:PRK02224 420 ERDELREREAELEAtlrtarERVEEAEALLeagkcpecgqpvegsphvETIEEDRERveeLEAELEDLEEEVEEVEERLE 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 557 QVneiyqstkNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSV-LESKFEQVEIHLKEEVEKVAELTSKLQEHKHKA 635
Cdd:PRK02224 500 RA--------EDLVEAEDRIERLEERREDLEELIAERRETIEEKRErAEELRERAAELEAEAEEKREAAAEAEEEAEEAR 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 636 SDRDVLEEKAIQLHKELQ---------ASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNEleqkVK 706
Cdd:PRK02224 572 EEVAELNSKLAELKERIEslerirtllAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDE----AR 647
|
490 500
....*....|....*....|....
gi 145322975 707 LADAKSKETESTGKEEEVEVKSRD 730
Cdd:PRK02224 648 IEEAREDKERAEEYLEQVEEKLDE 671
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
2-570 |
1.84e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.68 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 2 EEATKVSSDVPQAKEVTKEDTVMEKEEEDTIFDGGFVKVEKEGINKKyDDDDDEKAEKQLKSLEDALQLHDVKHKELTEV 81
Cdd:PTZ00121 1312 EEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADE-AEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK 1390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 82 KEAfDGLGLELENSRKKmielEDRIRISALEAEKLEELQKQSASELE-EKLKISDERYSKTDALLSQAlsqnsvleQKLK 160
Cdd:PTZ00121 1391 KKA-DEAKKKAEEDKKK----ADELKKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKA--------EEAK 1457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 161 SLEELSEKVSELKSAlivaeEEGKKSSIQMQEYQEKVSKLESSLNQSsarnseleEDLRIALQKGAEHEDIGNVSTKRSV 240
Cdd:PTZ00121 1458 KAEEAKKKAEEAKKA-----DEAKKKAEEAKKADEAKKKAEEAKKKA--------DEAKKAAEAKKKADEAKKAEEAKKA 1524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 241 ElqglfqtsqlKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERdlSENLNAVMEKLKSSEER--LEKQAREIDEATTR 318
Cdd:PTZ00121 1525 D----------EAKKAEEAKKADEAKKAEEKKKADELKKAEELKK--AEEKKKAEEAKKAEEDKnmALRKAEEAKKAEEA 1592
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 319 SIElEALHKHSELKVQKTMEdfSSRDTEAKSLTEKSKDLEE---KIRVYEGKLAEACGQSLSLQEELDQSSAENELLADT 395
Cdd:PTZ00121 1593 RIE-EVMKLYEEEKKMKAEE--AKKAEEAKIKAEELKKAEEekkKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKK 1669
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 396 NNQLKIKIQELEGYLDSEKETAiEKLNQKDTEAKdlitKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLES 475
Cdd:PTZ00121 1670 AEEDKKKAEEAKKAEEDEKKAA-EALKKEAEEAK----KAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKK 1744
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 476 TIEELEKENGDLAEVNiklNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEK 555
Cdd:PTZ00121 1745 KAEEAKKDEEEKKKIA---HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVI 1821
|
570
....*....|....*
gi 145322975 556 NQVNEIYQSTKNELV 570
Cdd:PTZ00121 1822 NDSKEMEDSAIKEVA 1836
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
88-635 |
1.90e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.66 E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 88 LGLELENSRKKMIELEDRIRISALeAEKLEELQKQsASELEEKLKISDERYSKTDAL----LSQALSQNSVLEQKLKSLE 163
Cdd:pfam15921 260 LLLQQHQDRIEQLISEHEVEITGL-TEKASSARSQ-ANSIQSQLEIIQEQARNQNSMymrqLSDLESTVSQLRSELREAK 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 164 ELSE-KVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAE--HEDIGNVST---- 236
Cdd:pfam15921 338 RMYEdKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRlwDRDTGNSITidhl 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 237 -----KRSVELQGLFQT-SQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKErDLSENLNAVMEKLKSSEERLEKQAR 310
Cdd:pfam15921 418 rreldDRNMEVQRLEALlKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLE-STKEMLRKVVEELTAKKMTLESSER 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 311 EIDEATT------RSIE-----LEALHKHSELKVQKTM------EDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACG 373
Cdd:pfam15921 497 TVSDLTAslqekeRAIEatnaeITKLRSRVDLKLQELQhlknegDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 374 QSLSLQEELDQSSAENELLADTNNQLKIKIQELEgYLDSEKETAIEKLNQKDTEAKDLITKLKsheNVIEEHKRQVLEAS 453
Cdd:pfam15921 577 LVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFK-ILKDKKDAKIRELEARVSDLELEKVKLV---NAGSERLRAVKDIK 652
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 454 GVADTRKVEVEEALLKLNTLESTIEELEK----ENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKelqiT 529
Cdd:pfam15921 653 QERDQLLNEVKTSRNELNSLSEDYEVLKRnfrnKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMK----V 728
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 530 IEDLTKQLTSER---ERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEklsALVAEKSVLESK 606
Cdd:pfam15921 729 AMGMQKQITAKRgqiDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE---VLRSQERRLKEK 805
|
570 580
....*....|....*....|....*....
gi 145322975 607 FEQVEIHLKEEVEKVAELTSKLQEHKHKA 635
Cdd:pfam15921 806 VANMEVALDKASLQFAECQDIIQRQEQES 834
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
91-439 |
2.30e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 2.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 91 ELENSRKKMIELEDRI-RISALEAEKLEELqkqsaseleEKLKISDERYSKTDALLSQalSQNSVLEQKLKSLEELSEKV 169
Cdd:TIGR02169 171 KKEKALEELEEVEENIeRLDLIIDEKRQQL---------ERLRREREKAERYQALLKE--KREYEGYELLKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 170 SELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAEhedignvstkrsvELQGLFQTS 249
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIG-------------ELEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 250 QLKLEKAEEKLKDLEaiqvknssleatlsvamEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHS 329
Cdd:TIGR02169 307 ERSIAEKERELEDAE-----------------ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDL 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 330 ELKVQktmedfsSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAEnelLADTNNQLKIKIQELEGy 409
Cdd:TIGR02169 370 RAELE-------EVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE---LADLNAAIAGIEAKINE- 438
|
330 340 350
....*....|....*....|....*....|
gi 145322975 410 LDSEKETAIEKLNQKDTEAKDLITKLKSHE 439
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
272-616 |
2.71e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 272 SLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLT 351
Cdd:TIGR02169 685 GLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELE 764
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 352 EKSKDLEEKIRVYEGKLAEAcgQSLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDS---EKETAIEKLNQKDTEA 428
Cdd:TIGR02169 765 ARIEELEEDLHKLEEALNDL--EARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRltlEKEYLEKEIQELQEQR 842
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 429 KDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDF 508
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSEL 922
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 509 QAKLSVLEAEKYQQAKELQITIEDLTK-----QLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKS 583
Cdd:TIGR02169 923 KAKLEALEEELSEIEDPKGEDEEIPEEelsleDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEER 1002
|
330 340 350
....*....|....*....|....*....|...
gi 145322975 584 DDMVSQIEKLSALvaEKSVLESKFEQVEIHLKE 616
Cdd:TIGR02169 1003 KAILERIEEYEKK--KREVFMEAFEAINENFNE 1033
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
498-744 |
5.51e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 5.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 498 LANQGSETDDFQAKLSVLEAEKYQQAKELQitiedltkQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQ 577
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELA--------ALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 578 VDKSKSDDMVSQIEKLSALVAEKSVLESKFEQV-EIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASH 656
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAELLRALYRLGRQpPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 657 TAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVEVKSRDSDLSFS 736
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
....*...
gi 145322975 737 NPKQTKIK 744
Cdd:COG4942 247 GFAALKGK 254
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
112-704 |
8.60e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 8.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 112 EAEKLEELQKQSASELEEKLKISDERySKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEG------KK 185
Cdd:TIGR00618 230 HLREALQQTQQSHAYLTQKREAQEEQ-LKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKavtqieQQ 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 186 SSIQMQEYQEKVSKLESSLNQSSA---RNSELEEDLRIALQKGAEHEDIGNVSTK---------RSVELQGLFQTSQLKL 253
Cdd:TIGR00618 309 AQRIHTELQSKMRSRAKLLMKRAAhvkQQSSIEEQRRLLQTLHSQEIHIRDAHEVatsireiscQQHTLTQHIHTLQQQK 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 254 EKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKV 333
Cdd:TIGR00618 389 TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSL 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 334 QKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQS------SAENELLADTNNQLKIKIQELE 407
Cdd:TIGR00618 469 KEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIdnpgplTRRMQRGEQTYAQLETSEEDVY 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 408 GYLDSEKETAIE-------------KLNQKDTEAKDLITKLKSHENVIE-------EHKRQVLEASGVADTRKVEVEEAL 467
Cdd:TIGR00618 549 HQLTSERKQRASlkeqmqeiqqsfsILTQCDNRSKEDIPNLQNITVRLQdlteklsEAEDMLACEQHALLRKLQPEQDLQ 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 468 LKLNTLESTIEELEKENGDLAEVNIKL---NQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITieDLTKQLTSERERL 544
Cdd:TIGR00618 629 DVRLHLQQCSQELALKLTALHALQLTLtqeRVREHALSIRVLPKELLASRQLALQKMQSEKEQLT--YWKEMLAQCQTLL 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 545 RSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQV-DKSKSDDMVSQIEKLSALVAEKSV----------LESKFEQVEIH 613
Cdd:TIGR00618 707 RELETHIEEYDREFNEIENASSSLGSDLAAREDAlNQSLKELMHQARTVLKARTEAHFNnneevtaalqTGAELSHLAAE 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 614 LKEEVEKVAELTSKLQEHK-----HKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELE--ATLKKSQEELDA 686
Cdd:TIGR00618 787 IQFFNRLREEDTHLLKTLEaeigqEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLkyEECSKQLAQLTQ 866
|
650
....*....|....*...
gi 145322975 687 KKSVIVHLESKLNELEQK 704
Cdd:TIGR00618 867 EQAKIIQLSDKLNGINQI 884
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
39-317 |
9.38e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.28 E-value: 9.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 39 KVEKEGINKKYDDDDDEKAEKQLKSLEDALQL----HDVKHKELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAE 114
Cdd:TIGR02168 769 RLEEAEEELAEAEAEIEELEAQIEQLKEELKAlreaLDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE 848
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 115 KLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQ 194
Cdd:TIGR02168 849 ELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLE 928
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 195 EKVSKLESSLNQSSARNSELEEDlrialqkgaEHEDIGNVSTKRSVELQGLfqtsQLKLEKAEEKLKDLEAIqvknsSLE 274
Cdd:TIGR02168 929 LRLEGLEVRIDNLQERLSEEYSL---------TLEEAEALENKIEDDEEEA----RRRLKRLENKIKELGPV-----NLA 990
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 145322975 275 ATLSVAMEKERdlSENLNAVMEKLKSSEERLEKQAREIDEATT 317
Cdd:TIGR02168 991 AIEEYEELKER--YDFLTAQKEDLTEAKETLEEAIEEIDREAR 1031
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
459-750 |
1.17e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 459 RKVEVEEALLKLNTLESTIEELEKEngdlaevniklnqkLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTKQLT 538
Cdd:TIGR02169 221 REYEGYELLKEKEALERQKEAIERQ--------------LASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGE 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 539 SERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEV 618
Cdd:TIGR02169 287 EEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEEL 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 619 E----KVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEAtlkksqeELDAKKSVIVHL 694
Cdd:TIGR02169 367 EdlraELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNA-------AIAGIEAKINEL 439
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 145322975 695 ESKLNELEQKVKLADAKSKETESTGKEEEVEVKSRDSDLSFSNPKQTKIKKNLDAA 750
Cdd:TIGR02169 440 EEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEA 495
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
55-616 |
1.61e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 55 EKAEKQLKSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIELEDRIrisaleaEKLEELQKQSASELEEKLKIS 134
Cdd:COG1196 288 AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL-------EELEEELEEAEEELEEAEAEL 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 135 DERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSEL 214
Cdd:COG1196 361 AEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 215 EEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAV 294
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 295 MEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQ 374
Cdd:COG1196 521 GLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 375 SLSLQEELDQSSAENELLADT--NNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEA 452
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTllGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE 680
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 453 SGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIED 532
Cdd:COG1196 681 LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPP 760
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 533 LTKQLTSERERLRSQISSLEEeknqVN----EIYQSTKNELVKLQAQLqvdksksDDMVSQIEKLSALVAE-----KSVL 603
Cdd:COG1196 761 DLEELERELERLEREIEALGP----VNllaiEEYEELEERYDFLSEQR-------EDLEEARETLEEAIEEidretRERF 829
|
570
....*....|...
gi 145322975 604 ESKFEQVEIHLKE 616
Cdd:COG1196 830 LETFDAVNENFQE 842
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
91-695 |
5.24e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 46.97 E-value: 5.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 91 ELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSE--- 167
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLELKEKIKNISDKNEyik 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 168 ------KVSELKSALIvaEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEED-LRIALQKGAEHEDIGNVSTKRSV 240
Cdd:TIGR01612 621 kaidlkKIIENNNAYI--DELAKISPYQVPEHLKNKDKIYSTIKSELSKIYEDDIDaLYNELSSIVKENAIDNTEDKAKL 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 241 ElqglfqTSQLKLEKAEEKLKDLEAIQV----------KNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLekqAR 310
Cdd:TIGR01612 699 D------DLKSKIDKEYDKIQNMETATVelhlsnienkKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKEL---SN 769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 311 EIDEATTRSIELEALH-KHSELKVQKTMEDF--SSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELdqsSA 387
Cdd:TIGR01612 770 KINDYAKEKDELNKYKsKISEIKNHYNDQINidNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDF---LN 846
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 388 ENELLADTNNQLKIKIqelegylDSEKETAIEKLNQKDTEAKDliTKLKSHENVIEEHKRQVLEASGvadtrkvEVEEAL 467
Cdd:TIGR01612 847 KVDKFINFENNCKEKI-------DSEHEQFAELTNKIKAEISD--DKLNDYEKKFNDSKSLINEINK-------SIEEEY 910
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 468 LKLNTL----------ESTIEELEKENGDLAEVNIKLNQKLAN-------QGSETDDFQAKLSVLEAEKYQQAKELQIT- 529
Cdd:TIGR01612 911 QNINTLkkvdeyikicENTKESIEKFHNKQNILKEILNKNIDTikesnliEKSYKDKFDNTLIDKINELDKAFKDASLNd 990
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 530 -----------IEDLTKQLTSERERLRSQisSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLsalva 598
Cdd:TIGR01612 991 yeaknnelikyFNDLKANLGKNKENMLYH--QFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKE----- 1063
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 599 eksvLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLK 678
Cdd:TIGR01612 1064 ----IGKNIELLNKEILEEAEINITNFNEIKEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKK 1139
|
650
....*....|....*..
gi 145322975 679 KSQEELDAKKSVIVHLE 695
Cdd:TIGR01612 1140 KSENYIDEIKAQINDLE 1156
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
462-718 |
5.29e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.83 E-value: 5.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 462 EVEEALLKlNTLESTIEELEKENgDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKElqiTIEDLT-KQLTSE 540
Cdd:PRK11281 55 EAEDKLVQ-QDLEQTLALLDKID-RQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE---TLSTLSlRQLESR 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 541 RERLRSQISSLEEEKNQVNE--IYQST-----KNELVKLQAQLQ--------VDKSKSDDMVSQIEKLSAlvaEKSVLES 605
Cdd:PRK11281 130 LAQTLDQLQNAQNDLAEYNSqlVSLQTqperaQAALYANSQRLQqirnllkgGKVGGKALRPSQRVLLQA---EQALLNA 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 606 KFEQveihLKEEVEKVAELTSKLQehkhkaSDRDVLEEKAIQLHKELQASHTAISEQKEALShkhselEATLKKSQEELD 685
Cdd:PRK11281 207 QNDL----QRKSLEGNTQLQDLLQ------KQRDYLTARIQRLEHQLQLLQEAINSKRLTLS------EKTVQEAQSQDE 270
|
250 260 270
....*....|....*....|....*....|...
gi 145322975 686 AKKSVIVHLESKlnELEQKVKLADAKSKETEST 718
Cdd:PRK11281 271 AARIQANPLVAQ--ELEINLQLSQRLLKATEKL 301
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
357-633 |
6.44e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 46.76 E-value: 6.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 357 LEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELegylDSEKETAIEKLNQKDTEAKDLITKLK 436
Cdd:pfam12128 246 LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTL----DDQWKEKRDELNGELSAADAAVAKDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 437 SHENVIEEHKRQVLEASgvADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLE 516
Cdd:pfam12128 322 SELEALEDQHGAFLDAD--IETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKL 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 517 AEKYQQAKELQITIEDLTKQLTSE-RERLRSQISSLEEEKNQVNEIYQSTKNELVKLQA--QLQVDKSKSDDMVSQIE-- 591
Cdd:pfam12128 400 AKIREARDRQLAVAEDDLQALESElREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATAtpELLLQLENFDERIERARee 479
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 145322975 592 ------KLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKH 633
Cdd:pfam12128 480 qeaanaEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELEL 527
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
374-730 |
6.67e-05 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.43 E-value: 6.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 374 QSLSLQEELDQSSAENELLADTNNQLKIKIQElEGYLDSEKETAIEKLNQKDTEAKDlitklksHENVIEEHKRQVLEAS 453
Cdd:PLN02939 40 RGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDE-NGQLENTSLRTVMELPQKSTSSDD-------DHNRASMQRDEAIAAI 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 454 GVADTRKVEVEEAL--LKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEA------EKYQQAKE 525
Cdd:PLN02939 112 DNEQQTNSKDGEQLsdFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMrlsetdARIKLAAQ 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 526 LQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLES 605
Cdd:PLN02939 192 EKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDA 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 606 KFEQVEIHLKEEVEKVAELTSKLQehkhkasdrDVLEEKAIQLHKEL-----QASHTAIS-EQKEALSHKHSELEATLKK 679
Cdd:PLN02939 272 SLRELESKFIVAQEDVSKLSPLQY---------DCWWEKVENLQDLLdratnQVEKAALVlDQNQDLRDKVDKLEASLKE 342
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 145322975 680 ------SQEELDAKKSVIVHLESKLN----ELEQKVKLADAKSKETESTGKE--EEVEVKSRD 730
Cdd:PLN02939 343 anvskfSSYKVELLQQKLKLLEERLQasdhEIHSYIQLYQESIKEFQDTLSKlkEESKKRSLE 405
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
393-601 |
7.63e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 7.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 393 ADTNNQLKIKIQELEgyldSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNT 472
Cdd:COG4942 19 ADAAAEAEAELEQLQ----QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 473 LESTIEELEKE----------NGDLAEVNIKLNQKLANQ--------GSETDDFQAKLSVLEAEKyQQAKELQITIEDLT 534
Cdd:COG4942 95 LRAELEAQKEElaellralyrLGRQPPLALLLSPEDFLDavrrlqylKYLAPARREQAEELRADL-AELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 145322975 535 KQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKS 601
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
61-461 |
2.09e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 61 LKSLEDAlQLHDVKHKELTEVKEAFDGLGLELensRKKMIELEDRIR-------ISALEAEKLE------ELQKQSASEL 127
Cdd:PRK10929 54 LNWLEER-KGSLERAKQYQQVIDNFPKLSAEL---RQQLNNERDEPRsvppnmsTDALEQEILQvssqllEKSRQAQQEQ 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 128 EEKLKISDErYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSsiqmqeyqeKVSKLEssLNQS 207
Cdd:PRK10929 130 DRAREISDS-LSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLTALQAESAALKA---------LVDELE--LAQL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 208 SARNSELEEDLRIAL-QKGAEHEDignvstkrsVELQGLF-QTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKER 285
Cdd:PRK10929 198 SANNRQELARLRSELaKKRSQQLD---------AYLQALRnQLNSQRQREAERALESTELLAEQSGDLPKSIVAQFKINR 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 286 DLSENLNavmeklksseerleKQAREID-------EATTRSIEL-EALhkhSELKVQKTMEDFSSRDTEAksLTEKSKDL 357
Cdd:PRK10929 269 ELSQALN--------------QQAQRMDliasqqrQAASQTLQVrQAL---NTLREQSQWLGVSNALGEA--LRAQVARL 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 358 EE--KIRVYEGKLAEACGQSLSLQEELDQSSAENELLAD-----TNNQLKIkiqelegyLDSEKETAIEKLNQ----KDT 426
Cdd:PRK10929 330 PEmpKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQAdgqplTAEQNRI--------LDAQLRTQRELLNSllsgGDT 401
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 145322975 427 EAKDLiTKLKSHENVIEEHKRQVLEASG-----VADTRKV 461
Cdd:PRK10929 402 LILEL-TKLKVANSQLEDALKEVNEATHrylfwVADVSPI 440
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
42-697 |
2.79e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 44.68 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 42 KEGINKKYDDDDDEKAEKQLKSLEDALQLHdvKHKELTEVKEAFDGLGLELENSRKKMIELED---RIRISALEAEKLE- 117
Cdd:COG5022 829 EKKLRETEEVEFSLKAEVLIQKFGRSLKAK--KRFSLLKKETIYLQSAQRVELAERQLQELKIdvkSISSLKLVNLELEs 906
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 118 ---ELQKQSASELEEKLKISDERYSKTDALLSQALSQNSV------------LEQKLKSLEELSEKVSELKSALIVAEEE 182
Cdd:COG5022 907 eiiELKKSLSSDLIENLEFKTELIARLKKLLNNIDLEEGPsieyvklpelnkLHEVESKLKETSEEYEDLLKKSTILVRE 986
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 183 GKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSV--ELQGLFQTSQLKLEKAEEKL 260
Cdd:COG5022 987 GNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSIlkPLQKLKGLLLLENNQLQARY 1066
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 261 KDLEaIQVKNSSLEATLSVAMEKERDLSENLNAvmEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKtmedf 340
Cdd:COG5022 1067 KALK-LRRENSLLDDKQLYQLESTENLLKTINV--KDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQL----- 1138
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 341 sSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQ---SLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETA 417
Cdd:COG5022 1139 -VNTLEPVFQKLSVLQLELDGLFWEANLEALPSPppfAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGW 1217
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 418 IEKLNQKD--TEAKDLITKLKSHENVIEEHKRQVLEASgvadtRKVEVEEALLKL--NTLESTIEELEKENGDLAEVNIK 493
Cdd:COG5022 1218 PRGDKLKKliSEGWVPTEYSTSLKGFNNLNKKFDTPAS-----MSNEKLLSLLNSidNLLSSYKLEEEVLPATINSLLQY 1292
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 494 LNQKLANQGSetddfqAKLSVLEAEKYQQAKELQitIEDLTKQLTSERERLRSQISSLEeeknQVNEIYQSTKNELVKLQ 573
Cdd:COG5022 1293 INVGLFNALR------TKASSLRWKSATEVNYNS--EELDDWCREFEISDVDEELEELI----QAVKVLQLLKDDLNKLD 1360
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 574 AQLQVDKSKSDDmvsQIEKLSAlvaeksvlESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLhkelq 653
Cdd:COG5022 1361 ELLDACYSLNPA---EIQNLKS--------RYDPADKENNLPKEILKKIEALLIKQELQLSLEGKDETEVHLSEI----- 1424
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 145322975 654 ashtaISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESK 697
Cdd:COG5022 1425 -----FSEEKSLISLDRNSIYKEEVLSSLSALLTKEKIALLDRK 1463
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
287-496 |
3.09e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 287 LSENLNAVMEKLKSSEERLEKQAREIDEattrsiELEAlhkhSELKVQKTME--DFSSRDTEAKSLTEKSKDLEEKIRVY 364
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRK------ELEE----AEAALEEFRQknGLVDLSEEAKLLLQQLSELESQLAEA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 365 EGKLAEACGQSLSLQEELDQSSAE-NELLADTNNQ-LKIKIQELegyldsekETAIEKLNQKDTEAKDLITKLKSHENVI 442
Cdd:COG3206 232 RAELAEAEARLAALRAQLGSGPDAlPELLQSPVIQqLRAQLAEL--------EAELAELSARYTPNHPDVIALRAQIAAL 303
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 145322975 443 EEHKRQvlEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQ 496
Cdd:COG3206 304 RAQLQQ--EAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRR 355
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
452-687 |
4.75e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 452 ASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEkyqqAKELQITIE 531
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE----LAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 532 DLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEksvLESKFEQVE 611
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE---LAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145322975 612 IHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAK 687
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
37-321 |
5.82e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 5.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 37 FVKVEKEgINKKYDDDDDEKAEKQLKSLEDALQLHDVKhkELTEVKEafdglglELENSRKKMIELEDRIRISALEAEKL 116
Cdd:PRK03918 482 LRELEKV-LKKESELIKLKELAEQLKELEEKLKKYNLE--ELEKKAE-------EYEKLKEKLIKLKGEIKSLKKELEKL 551
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 117 EELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEK 196
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKA 631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 197 VSKLESSLNQSSARNSELEEDLRIALQKgaEHEDIGNVSTKRSVELQGLfqtsQLKLEKAEEKLKDLEAIQVKnssLEAT 276
Cdd:PRK03918 632 FEELAETEKRLEELRKELEELEKKYSEE--EYEELREEYLELSRELAGL----RAELEELEKRREEIKKTLEK---LKEE 702
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 145322975 277 LSvAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIE 321
Cdd:PRK03918 703 LE-EREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVG 746
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
91-536 |
6.29e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 6.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 91 ELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVS 170
Cdd:TIGR02169 675 ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 171 ELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSarnseleedlrialqkgaehedignvstkrsvelqglFQTSQ 250
Cdd:TIGR02169 755 NVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR-------------------------------------IPEIQ 797
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 251 LKLEKAEEKLKDLEAIQvknSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSE 330
Cdd:TIGR02169 798 AELSKLEEEVSRIEARL---REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELE 874
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 331 LKVqktmedfssrdteaKSLTEKSKDLEEKIRVYEGKLAEacgqslsLQEELDQSSAENELLADTNNQLKIKIQELEgyl 410
Cdd:TIGR02169 875 AAL--------------RDLESRLGDLKKERDELEAQLRE-------LERKIEELEAQIEKKRKRLSELKAKLEALE--- 930
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 411 dsEKETAIEKLNQKDteakdlitklkshenvieehkrqvleasgvadtrkVEVEEALLKLNTLESTIEELEKENGDLAEV 490
Cdd:TIGR02169 931 --EELSEIEDPKGED-----------------------------------EEIPEEELSLEDVQAELQRVEEEIRALEPV 973
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 145322975 491 NIKLNQKLANQGSETDDFQAKLSVLEAEKyqqaKELQITIEDLTKQ 536
Cdd:TIGR02169 974 NMLAIQEYEEVLKRLDELKEKRAKLEEER----KAILERIEEYEKK 1015
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
16-357 |
6.47e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.35 E-value: 6.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 16 EVTKEDTVMEKEEEDTIFDGgfvkvEKEGINKKYDDDDDEKAEKQLKSLEDALQLHDVKHKELTEVkeafdglgleLENS 95
Cdd:PLN02939 76 ENTSLRTVMELPQKSTSSDD-----DHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGM----------IQNA 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 96 RKKMIELeDRIRISALEaeKLEELQKQSaSELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEK------- 168
Cdd:PLN02939 141 EKNILLL-NQARLQALE--DLEKILTEK-EALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNEllirgat 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 169 ----VSELKSALIVAEEEG----------KKSSIQMQEYQEKVSKLES--SLNQSSARnsELEEDLRIAlqkgaeHEDIG 232
Cdd:PLN02939 217 eglcVHSLSKELDVLKEENmllkddiqflKAELIEVAETEERVFKLEKerSLLDASLR--ELESKFIVA------QEDVS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 233 NVSTKR------SVE-LQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDlSENLNAVMEKLKSSEERL 305
Cdd:PLN02939 289 KLSPLQydcwweKVEnLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKFS-SYKVELLQQKLKLLEERL 367
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 145322975 306 EKQAREIDEATTrsieleaLHKHSELKVQKTMEDFSSrDTEAKSLTEKSKDL 357
Cdd:PLN02939 368 QASDHEIHSYIQ-------LYQESIKEFQDTLSKLKE-ESKKRSLEHPADDM 411
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
521-708 |
6.78e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 6.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 521 QQAKELQITIEDLTKQLtsERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEK 600
Cdd:COG3206 182 EQLPELRKELEEAEAAL--EEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 601 SV------LESKFEQVEIHLKEEVEKVAELTSKLQEHKHKasdRDVLEEkaiQLHKELQASHTAISEQKEALSHKhselE 674
Cdd:COG3206 260 LQspviqqLRAQLAELEAELAELSARYTPNHPDVIALRAQ---IAALRA---QLQQEAQRILASLEAELEALQAR----E 329
|
170 180 190
....*....|....*....|....*....|....
gi 145322975 675 ATLKKSQEELDAKKSVIVHLESKLNELEQKVKLA 708
Cdd:COG3206 330 ASLQAQLAQLEARLAELPELEAELRRLEREVEVA 363
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
139-725 |
8.73e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.80 E-value: 8.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 139 SKTDALLSQALSQNSVLeqkLKSLEELSEKVSELKSALivaeEEGKKSsiqmqeYQEKVSKLESSLNQSsarNSELEEDL 218
Cdd:pfam15921 299 SQLEIIQEQARNQNSMY---MRQLSDLESTVSQLRSEL----REAKRM------YEDKIEELEKQLVLA---NSELTEAR 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 219 RIALQKGAEHEDIGNVSTKRSVELQGlfQTSQLKLEKaeEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKL 298
Cdd:pfam15921 363 TERDQFSQESGNLDDQLQKLLADLHK--REKELSLEK--EQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAM 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 299 KSS-EERLEKQAREI---DEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLeekirvyegklaeacgq 374
Cdd:pfam15921 439 KSEcQGQMERQMAAIqgkNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDL----------------- 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 375 SLSLQEELDQSSAENELLADTNNQLKIKIQELEgYLDSEKEtaieKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASG 454
Cdd:pfam15921 502 TASLQEKERAIEATNAEITKLRSRVDLKLQELQ-HLKNEGD----HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 455 VADTRKVEVEEALLKLNTLESTIEELEKEngdLAEVNIKLNQKlanqGSETDDFQAKLSVLEAEKyqqakelqitiedlT 534
Cdd:pfam15921 577 LVGQHGRTAGAMQVEKAQLEKEINDRRLE---LQEFKILKDKK----DAKIRELEARVSDLELEK--------------V 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 535 KQLTSERERLRSqISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDK----SKSDDMVSQIEKLSALVAEKsvlESKFEQV 610
Cdd:pfam15921 636 KLVNAGSERLRA-VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKrnfrNKSEEMETTTNKLKMQLKSA---QSELEQT 711
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 611 EIHLKE------EVEKVA-----ELTSKLQEHKHKASDRDVLEEKAIQLHKELQAshtaISEQKEALSHKHSELEATLKK 679
Cdd:pfam15921 712 RNTLKSmegsdgHAMKVAmgmqkQITAKRGQIDALQSKIQFLEEAMTNANKEKHF----LKEEKNKLSQELSTVATEKNK 787
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 145322975 680 SQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVE 725
Cdd:pfam15921 788 MAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQE 833
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
55-599 |
9.25e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.97 E-value: 9.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 55 EKAEKQLKSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAEKLEElQKQSASELEEKLKIS 134
Cdd:PRK01156 200 ENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAES-DLSMELEKNNYYKEL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 135 DERYSKTDALLSQAlSQNSVLE--QKLKSLEELSEKVSELKSALIVAEEEGKKSS---------IQMQEYQEKVSKLESS 203
Cdd:PRK01156 279 EERHMKIINDPVYK-NRNYINDyfKYKNDIENKKQILSNIDAEINKYHAIIKKLSvlqkdyndyIKKKSRYDDLNNQILE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 204 LNQ-SSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAME 282
Cdd:PRK01156 358 LEGyEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRE 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 283 KERDLSENLNAvmeklksseerLEKQAREIDEATTRSIE-LEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKI 361
Cdd:PRK01156 438 NLDELSRNMEM-----------LNGQSVCPVCGTTLGEEkSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRK 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 362 RVYEGKLAEacgQSLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHEnv 441
Cdd:PRK01156 507 EYLESEEIN---KSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLID-- 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 442 ieehkrqvleasgvADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANqgsETDDFQAKLSVLEAEKyQ 521
Cdd:PRK01156 582 --------------IETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIEN---EANNLNNKYNEIQENK-I 643
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 145322975 522 QAKELQITIEDLTKQLTSERERLRSQiSSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAE 599
Cdd:PRK01156 644 LIEKLRGKIDNYKKQIAEIDSIIPDL-KEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRIND 720
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
317-748 |
9.28e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.70 E-value: 9.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 317 TRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAEN------- 389
Cdd:TIGR04523 124 VELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLlklelll 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 390 ---ELLADTNNQLKIKIQELEGYLDSEKETAIEK---LNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEV 463
Cdd:TIGR04523 204 snlKKKIQKNKSLESQISELKKQNNQLKDNIEKKqqeINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 464 EEALLKLNTLESTIEELEKENGdlAEVNIKLNQKLANQGSETDDFQAKLSvleaEKYQQAKELQITIEDLTKQLTSerer 543
Cdd:TIGR04523 284 KELEKQLNQLKSEISDLNNQKE--QDWNKELKSELKNQEKKLEEIQNQIS----QNNKIISQLNEQISQLKKELTN---- 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 544 LRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAE 623
Cdd:TIGR04523 354 SESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKE 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 624 LTSKLQEHKHKASDRDVLEEKAIqlhKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQ 703
Cdd:TIGR04523 434 TIIKNNSEIKDLTNQDSVKELII---KNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEE 510
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 145322975 704 KVKLADAKSKETESTGKEEEVEVKSRDSDLSFSNPKQTKIKKNLD 748
Cdd:TIGR04523 511 KVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK 555
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
101-706 |
9.40e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.73 E-value: 9.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 101 ELEDRIRISALEAEKLEELQKQSASELEEKlkiSDERYSKTDALLSQALSQNSVLEQklkslEELSEKVSELKSALIVAE 180
Cdd:TIGR00606 372 SLATRLELDGFERGPFSERQIKNFHTLVIE---RQEDEAKTAAQLCADLQSKERLKQ-----EQADEIRDEKKGLGRTIE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 181 EEGKKSSIQMQEYQEKVSKLESsLNQSSARNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQglFQTSQLKLEKAEEKL 260
Cdd:TIGR00606 444 LKKEILEKKQEELKFVIKELQQ-LEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKS--LQNEKADLDRKLRKL 520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 261 -KDLEAIQVKNSSLEATLSVA---MEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELealhKHSELKVQKT 336
Cdd:TIGR00606 521 dQEMEQLNHHTTTRTQMEMLTkdkMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEI----NQTRDRLAKL 596
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 337 MEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSL------SLQEELDQSSAENELLADTNNQLKIKIQELEGYl 410
Cdd:TIGR00606 597 NKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDeesdleRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDE- 675
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 411 DSEKETAIEKLNQKDTEAKDLITKLkshENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEV 490
Cdd:TIGR00606 676 NQSCCPVCQRVFQTEAELQEFISDL---QSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNK 752
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 491 NIKLNQKLANQGSETDDFQAKLSVLEAEKyQQAKELQITIEDLtkqltserERLRSQISSLEEEKNQVNEIYQSTKNELV 570
Cdd:TIGR00606 753 LQKVNRDIQRLKNDIEEQETLLGTIMPEE-ESAKVCLTDVTIM--------ERFQMELKDVERKIAQQAAKLQGSDLDRT 823
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 571 --KLQAQLQVDKSKSDDMVSQIEKLSALVAEKsvleskfEQVEIHLKEeveKVAELTSKLQEHKHKASDRDVLEEKAIQL 648
Cdd:TIGR00606 824 vqQVNQEKQEKQHELDTVVSKIELNRKLIQDQ-------QEQIQHLKS---KTNELKSEKLQIGTNLQRRQQFEEQLVEL 893
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 145322975 649 HKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVK 706
Cdd:TIGR00606 894 STEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVK 951
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
72-639 |
1.05e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 72 DVKHKELTEVKEAFDGLGLELE---NSRKKMIELEDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQA 148
Cdd:pfam12128 404 EARDRQLAVAEDDLQALESELReqlEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAA 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 149 LSQNSVLEQKLKSLEELSEK-----------VSELKSALIVAEEEGKKSSIQMQEYqekVSKLESSLNQSSARNSELEED 217
Cdd:pfam12128 484 NAEVERLQSELRQARKRRDQasealrqasrrLEERQSALDELELQLFPQAGTLLHF---LRKEAPDWEQSIGKVISPELL 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 218 LRIALQKGAEHEDIGNVSTKRSVELqglfqtsQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEK 297
Cdd:pfam12128 561 HRTDLDPEVWDGSVGGELNLYGVKL-------DLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGE 633
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 298 LKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQktmedfssrdteaKSLTEKSKDLEEKIRVYEGKLAEACGQSLS 377
Cdd:pfam12128 634 LEKASREETFARTALKNARLDLRRLFDEKQSEKDKKN-------------KALAERKDSANERLNSLEAQLKQLDKKHQA 700
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 378 LQEELDQSSAENELladtnnQLKIKIQELEGYLDSeketaieKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVAD 457
Cdd:pfam12128 701 WLEEQKEQKREART------EKQAYWQVVEGALDA-------QLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDP 767
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 458 TRKVEVEEallKLNTLESTIEELEKENGDLAEVNIKLNQKLAnqgSETDDFQAKLSVLEaekyQQAKELQITIEDLTKQL 537
Cdd:pfam12128 768 DVIAKLKR---EIRTLERKIERIAVRRQEVLRYFDWYQETWL---QRRPRLATQLSNIE----RAISELQQQLARLIADT 837
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 538 TSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLqAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEE 617
Cdd:pfam12128 838 KLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKL-ATLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHF 916
|
570 580
....*....|....*....|...
gi 145322975 618 VEKVAELT-SKLQEHKHKASDRD 639
Cdd:pfam12128 917 KNVIADHSgSGLAETWESLREED 939
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
96-702 |
1.21e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.41 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 96 RKKMIELEDRIRISALEAEKLEELQK---QSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKV-SE 171
Cdd:pfam15921 109 RQSVIDLQTKLQEMQMERDAMADIRRresQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVlQE 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 172 LKSALIVAEE-EGKK-------SSIQMQEYQEKVSKLESSLN---------------QSSARNSELEEDLRIALQkgaEH 228
Cdd:pfam15921 189 IRSILVDFEEaSGKKiyehdsmSTMHFRSLGSAISKILRELDteisylkgrifpvedQLEALKSESQNKIELLLQ---QH 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 229 ED-IGNVSTKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKN-----------SSLEATLSvamEKERDLSENLNAVME 296
Cdd:pfam15921 266 QDrIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQArnqnsmymrqlSDLESTVS---QLRSELREAKRMYED 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 297 KLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKirvyegklaeACGQSL 376
Cdd:pfam15921 343 KIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDR----------DTGNSI 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 377 S---LQEELDQSSAENELLADTnnqLKIKIQELEGYLDSEKeTAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEAS 453
Cdd:pfam15921 413 TidhLRRELDDRNMEVQRLEAL---LKAMKSECQGQMERQM-AAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKK 488
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 454 GVADTRKVEVEEALLKLNTLESTIEELEKENGDL-AEVNIKLN--QKLANQGSETDDFQAKLSVLEAEKYQQAKELQI-- 528
Cdd:pfam15921 489 MTLESSERTVSDLTASLQEKERAIEATNAEITKLrSRVDLKLQelQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEIlr 568
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 529 -TIEDLTkQLTSERERlrsQISSLEEEKNQVNEIYQSTKNELvklqAQLQVDKSKSDDMVSQieklsalvaeksvLESKF 607
Cdd:pfam15921 569 qQIENMT-QLVGQHGR---TAGAMQVEKAQLEKEINDRRLEL----QEFKILKDKKDAKIRE-------------LEARV 627
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 608 EQVEIhlkEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAK 687
Cdd:pfam15921 628 SDLEL---EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSA 704
|
650
....*....|....*
gi 145322975 688 KSVIVHLESKLNELE 702
Cdd:pfam15921 705 QSELEQTRNTLKSME 719
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
254-489 |
1.26e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 254 EKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEAlhkhselkv 333
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK--------- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 334 qktmedfsSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELEG---YL 410
Cdd:COG4942 91 --------EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAdlaEL 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 145322975 411 DSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAE 489
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
76-707 |
1.45e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.31 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 76 KELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAEKLEelqkQSASELEEKLKISDERYSKTDALLSQALSQNSVL 155
Cdd:TIGR04523 40 KKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILE----QQIKDLNDKLKKNKDKINKLNSDLSKINSEIKND 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 156 EQKLKSLEElseKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAEHEDIGNVS 235
Cdd:TIGR04523 116 KEQKNKLEV---ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 236 TKRSVELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEA 315
Cdd:TIGR04523 193 KNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEK 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 316 TTRSIELEALHKHSELKVQKTMEDFSSRDTEA-----KSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENE 390
Cdd:TIGR04523 273 QKELEQNNKKIKELEKQLNQLKSEISDLNNQKeqdwnKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELT 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 391 LLADTNNQLKIKIQElegyldseKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTrkveveeallKL 470
Cdd:TIGR04523 353 NSESENSEKQRELEE--------KQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDE----------QI 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 471 NTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKyqqaKELQITIEDLTKQLTSERERLRSQISS 550
Cdd:TIGR04523 415 KKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTR----ESLETQLKVLSRSINKIKQNLEQKQKE 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 551 LEEEKNQVNEIYQSTKNelvkLQAQLQVDKSKSDDMVSQIEKLSALVAEK----SVLESKFEQVEIHLKEEV--EKVAEL 624
Cdd:TIGR04523 491 LKSKEKELKKLNEEKKE----LEEKVKDLTKKISSLKEKIEKLESEKKEKeskiSDLEDELNKDDFELKKENleKEIDEK 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 625 TSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQK 704
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQE 646
|
...
gi 145322975 705 VKL 707
Cdd:TIGR04523 647 VKQ 649
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
8-725 |
1.73e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.88 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 8 SSDVPQAKEVTKEDTVMEKEEEDTIFDGGFVKVEKEGINKKYDDDDDEKAEKQLKSLEDALQLHDVKHKELTEVKeafdg 87
Cdd:pfam02463 310 VDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESE----- 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 88 lglelensrkkmiELEDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSE 167
Cdd:pfam02463 385 -------------RLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 168 KVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLnqssaRNSELEEDLRIALQKGAEHEDIGNVSTKRSVELQGLFQ 247
Cdd:pfam02463 452 ELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLEL-----LLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIIS 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 248 TSQLKLEKAEEKlkdlEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHK 327
Cdd:pfam02463 527 AHGRLGDLGVAV----ENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPI 602
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 328 HSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKIKIQELE 407
Cdd:pfam02463 603 LNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQ 682
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 408 GYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDL 487
Cdd:pfam02463 683 EKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEK 762
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 488 AEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKN 567
Cdd:pfam02463 763 EEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALEL 842
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 568 ELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRD---VLEEK 644
Cdd:pfam02463 843 KEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEkenEIEER 922
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 645 AIQLHKELQASHT---------AISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKET 715
Cdd:pfam02463 923 IKEEAEILLKYEEepeellleeADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEE 1002
|
730
....*....|
gi 145322975 716 ESTGKEEEVE 725
Cdd:pfam02463 1003 EKKKLIRAII 1012
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
58-323 |
1.98e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 58 EKQLKSLEDALQLHDVKH-KELTEVKEAFdglglELENSRKKMIELEDRIRI--SALEAEKL--EELQKQSASELEEKLK 132
Cdd:PRK05771 15 KSYKDEVLEALHELGVVHiEDLKEELSNE-----RLRKLRSLLTKLSEALDKlrSYLPKLNPlrEEKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 133 ISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNS 212
Cdd:PRK05771 90 DVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEELKLESDVENV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 213 ELEEDLrialqkgaehEDIGNVstkrsvelqgLFQTSQLKLEKAEEKLKDLEAIQVKNS---SLEATLSVAMEKERDLSE 289
Cdd:PRK05771 170 EYISTD----------KGYVYV----------VVVVLKELSDEVEEELKKLGFERLELEeegTPSELIREIKEELEEIEK 229
|
250 260 270
....*....|....*....|....*....|....
gi 145322975 290 NLNAVMEKLKSSEERLEKQAREIDEATtrSIELE 323
Cdd:PRK05771 230 ERESLLEELKELAKKYLEELLALYEYL--EIELE 261
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
295-728 |
2.71e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 295 MEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDfSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQ 374
Cdd:PTZ00121 1069 DEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEE-ARKAEEAKKKAEDARKAEEARKAEDARKAEEARK 1147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 375 SLSLQEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKlnQKDTEAKDLITKLKSHENVIEEHKRQVLEASG 454
Cdd:PTZ00121 1148 AEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEEL--RKAEDARKAEAARKAEEERKAEEARKAEDAKK 1225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 455 VADTRKVEV----EEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQITI 530
Cdd:PTZ00121 1226 AEAVKKAEEakkdAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD 1305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 531 EdlTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSAlvAEKSVLESKFEQV 610
Cdd:PTZ00121 1306 E--AKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA--AEKKKEEAKKKAD 1381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 611 EIHLK-EEVEKVAELTSKLQEHKHKASDRDVLEE---KAIQLHKELQASHTAISEQKEALSHKHSE---LEATLKKSQEE 683
Cdd:PTZ00121 1382 AAKKKaEEKKKADEAKKKAEEDKKKADELKKAAAakkKADEAKKKAEEKKKADEAKKKAEEAKKADeakKKAEEAKKAEE 1461
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 145322975 684 LDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEVEVKS 728
Cdd:PTZ00121 1462 AKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA 1506
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
503-627 |
2.95e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 503 SETDDFQAKLSVLEAEKYQQAKElqitiedlTKQLTSER-ERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQvdks 581
Cdd:COG0542 411 EELDELERRLEQLEIEKEALKKE--------QDEASFERlAELRDELAELEEELEALKARWEAEKELIEEIQELKE---- 478
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 145322975 582 ksdDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEV--EKVAELTSK 627
Cdd:COG0542 479 ---ELEQRYGKIPELEKELAELEEELAELAPLLREEVteEDIAEVVSR 523
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
462-708 |
3.31e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 462 EVEEALLKLNTLEstIEELEKE-----NGDLAEVNIKLNQKLANQGSETDDFQAKLSVLEAEKYQQAKELQ-------IT 529
Cdd:PRK05771 20 EVLEALHELGVVH--IEDLKEElsnerLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIkdveeelEK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 530 IEDLTKQLTSERERLRSQISSLEEEKNQVnEIYQSTKNELVKLQAQL-------QVDKSKSDDMVSQIEKLSALVAEKSV 602
Cdd:PRK05771 98 IEKEIKELEEEISELENEIKELEQEIERL-EPWGNFDLDLSLLLGFKyvsvfvgTVPEDKLEELKLESDVENVEYISTDK 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 603 LESKFeqVEIHLKEEVEKVAELTSKLQehkhkasdrdvLEEKAIQLHKELQAshtAISEQKEALSHKHSELEATLKK--- 679
Cdd:PRK05771 177 GYVYV--VVVVLKELSDEVEEELKKLG-----------FERLELEEEGTPSE---LIREIKEELEEIEKERESLLEElke 240
|
250 260 270
....*....|....*....|....*....|
gi 145322975 680 -SQEELDAKKSVIVHLESKLNELEQKVKLA 708
Cdd:PRK05771 241 lAKKYLEELLALYEYLEIELERAEALSKFL 270
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
517-697 |
3.53e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 517 AEKYQQAKELQITIEDLTKQLTSERERLRSQIssLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSAl 596
Cdd:COG4913 261 AERYAAARERLAELEYLRAALRLWFAQRRLEL--LEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGG- 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 597 vAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKA-SDRDVLEEkaiqLHKELQASHTAISEQKEALSHKHSELEA 675
Cdd:COG4913 338 -DRLEQLEREIERLERELEERERRRARLEALLAALGLPLpASAEEFAA----LRAEAAALLEALEEELEALEEALAEAEA 412
|
170 180
....*....|....*....|..
gi 145322975 676 TLKKSQEELDAKKSVIVHLESK 697
Cdd:COG4913 413 ALRDLRRELRELEAEIASLERR 434
|
|
| CCDC14 |
pfam15254 |
Coiled-coil domain-containing protein 14; This protein family, Coiled-coil domain-containing ... |
374-499 |
3.81e-03 |
|
Coiled-coil domain-containing protein 14; This protein family, Coiled-coil domain-containing protein 14 (CCDC14) is a domain of unknown function. This family of proteins is found in eukaryotes. Proteins in this family are typically between 301 and 912 amino acids in length.
Pssm-ID: 464594 Cd Length: 857 Bit Score: 40.94 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 374 QSL--SLQEELDQSSAENELLADTNNQLkIKIQElegyldseketaieklNQKDtEAKDLITKLKSHENVIEEHKRQvle 451
Cdd:pfam15254 433 QSLnmSLQNQLQESLKSQELLQSKNEEL-LKVIE----------------NQKE-ENKKLTKIFKEKEQTLLENKQQ--- 491
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 145322975 452 aSGVADTR-KVEVEEALLKLNTLESTIEELEKENGDLAevnIKLNQKLA 499
Cdd:pfam15254 492 -FDIETTRvKIELEEALVNMKSFQFKLEAAEKENQILG---ITLRQRDA 536
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
91-319 |
3.86e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 91 ELENSRKKMIELEDRIRisalEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLE------- 163
Cdd:COG4942 21 AAAEAEAELEQLQQEIA----ELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEkeiaelr 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 164 -ELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESS---LNQSSARNSELEEDLRIALQKGAEHEDignvstkrs 239
Cdd:COG4942 97 aELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRlqyLKYLAPARREQAEELRADLAELAALRA--------- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 240 vELQGLFQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRS 319
Cdd:COG4942 168 -ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
145-725 |
4.51e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 40.66 E-value: 4.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 145 LSQALSQNSVLEQKLKS----LEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSE---LEED 217
Cdd:PRK01156 178 LRAEISNIDYLEEKLKSsnleLENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMknrYESE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 218 LRialqkgaehedignvstkrsvelqglfqTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEK 297
Cdd:PRK01156 258 IK----------------------------TAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIEN 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 298 LKSSEERLEKQAREIDEATTRSIELEALHKHSELKvQKTMEDFssrDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLS 377
Cdd:PRK01156 310 KKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKK-KSRYDDL---NNQILELEGYEMDYNSYLKSIESLKKKIEEYSKN 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 378 LQEELDQSSAENELLADTNNQLKIKIQELEGYLDsEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVAD 457
Cdd:PRK01156 386 IERMSAFISEILKIQEIDPDAIKKELNEINVKLQ-DISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGE 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 458 TRKVE-VEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSEtddfqaKLSVLEAEkYQQAKELQITIEDLTKQ 536
Cdd:PRK01156 465 EKSNHiINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESE------EINKSINE-YNKIESARADLEDIKIK 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 537 LTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQ-----LQVDKSKSDDMVSQIEKLSALVAEksvLESKFEQVE 611
Cdd:PRK01156 538 INELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVislidIETNRSRSNEIKKQLNDLESRLQE---IEIGFPDDK 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 612 IHLKEEVEKVAELTSKLQEHKHKASDRDVLEEK---AIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKK 688
Cdd:PRK01156 615 SYIDKSIREIENEANNLNNKYNEIQENKILIEKlrgKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAK 694
|
570 580 590
....*....|....*....|....*....|....*...
gi 145322975 689 SVIVHLESKLNELEQKV-KLADAKSKETESTGKEEEVE 725
Cdd:PRK01156 695 ANRARLESTIEILRTRInELSDRINDINETLESMKKIK 732
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
419-724 |
4.55e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 419 EKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGdlaevniKLNQKL 498
Cdd:TIGR02169 681 ERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS-------SLEQEI 753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 499 ANQGSETDDFQAKLSVLEAEKyqqaKELQITIEDLTKQLTSER-ERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQ 577
Cdd:TIGR02169 754 ENVKSELKELEARIEELEEDL----HKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 578 VDKSKSDDMVSQIEKLsalvaeksvleskfeqvEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKELQASHT 657
Cdd:TIGR02169 830 YLEKEIQELQEQRIDL-----------------KEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERD 892
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 145322975 658 AISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLADAKSKETESTGKEEEV 724
Cdd:TIGR02169 893 ELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAE 959
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
155-371 |
5.76e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 5.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 155 LEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIALQKGAEHEDignV 234
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE---E 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 235 STKRSVELQGLFQTSQLKLEKAEEKLKDLeaiqVKNSSLEATLSVAMEKE-RDLSENLNAVMEKLKSSEERLEKQAREID 313
Cdd:COG4942 106 LAELLRALYRLGRQPPLALLLSPEDFLDA----VRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 145322975 314 EATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEA 371
Cdd:COG4942 182 ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
296-564 |
6.35e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 6.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 296 EKLKSSEERLEKQAREIDEATTRSIELEALHKHSE--LKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIrvyegklaeacg 373
Cdd:COG4913 610 AKLAALEAELAELEEELAEAEERLEALEAELDALQerREALQRLAEYSWDEIDVASAEREIAELEAEL------------ 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 374 qslslqEELDQSSAENELLADTNNQLKIKIQELEGYLDsEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEAS 453
Cdd:COG4913 678 ------ERLDASSDDLAALEEQLEELEAELEELEEELD-ELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL 750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 454 GVADTRKVEVEEALLKL-----NTLESTIEELEKENGDLAEVNIKLNQKLANQGSETD-------DFQAKLSVLEA---- 517
Cdd:COG4913 751 LEERFAAALGDAVERELrenleERIDALRARLNRAEEELERAMRAFNREWPAETADLDadleslpEYLALLDRLEEdglp 830
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 145322975 518 EKYQQAKELqitiedLTKQLTSERERLRSQI-SSLEEEKNQVNEIYQS 564
Cdd:COG4913 831 EYEERFKEL------LNENSIEFVADLLSKLrRAIREIKERIDPLNDS 872
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
77-600 |
7.02e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.09 E-value: 7.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 77 ELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAEKLEELQKQSASELEEkLKISDERysktdallsqALSQNSVLE 156
Cdd:pfam05483 248 QITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELED-IKMSLQR----------SMSTQKALE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 157 QKLKSLEELSEKVSELKSALIVAEEEGKKS-SIQMQEYQEKVSKLESSLNQSSARNSELEEDLRIAL----QKGAEHEDI 231
Cdd:pfam05483 317 EDLQIATKTICQLTEEKEAQMEELNKAKAAhSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITmelqKKSSELEEM 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 232 GNVSTKRSVELQGL---FQTSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQ 308
Cdd:pfam05483 397 TKFKNNKEVELEELkkiLAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDL 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 309 AREIDEATTRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAE 388
Cdd:pfam05483 477 KTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREE 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 389 NELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEE--HKRQVLEASGVADTRKVEVEEa 466
Cdd:pfam05483 557 FIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEElhQENKALKKKGSAENKQLNAYE- 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 467 lLKLNTLESTIEELEKENGDLAEVNIKL--NQKLANQGSETDDFQAKLSVLEAEKYQqaKELQITIEDLTKQLTSERERL 544
Cdd:pfam05483 636 -IKVNKLELELASAKQKFEEIIDNYQKEieDKKISEEKLLEEVEKAKAIADEAVKLQ--KEIDKRCQHKIAEMVALMEKH 712
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 145322975 545 RSQISSLEEEKNQVNEIYQST------------------KNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEK 600
Cdd:pfam05483 713 KHQYDKIIEERDSELGLYKNKeqeqssakaaleielsniKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
544-706 |
7.43e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 39.18 E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 544 LRSQISSLEEEKNQVNeiyqstkNELVKLQAQLQVDKSKSDDMVSQIEKLSALV----AEKSVLESKFEQVEIHLKEEVE 619
Cdd:PRK09039 44 LSREISGKDSALDRLN-------SQIAELADLLSLERQGNQDLQDSVANLRASLsaaeAERSRLQALLAELAGAGAAAEG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 620 KVAELTSKLqehkhkASDRDVLEEKAIQLhkelqashTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLN 699
Cdd:PRK09039 117 RAGELAQEL------DSEKQVSARALAQV--------ELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLN 182
|
....*...
gi 145322975 700 -ELEQKVK 706
Cdd:PRK09039 183 vALAQRVQ 190
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
91-467 |
8.31e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 39.94 E-value: 8.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 91 ELENSRKKMIELEDRIRISALEAEKLEELQkqsaSELEEKLKISDERYsktdALLSQALSQNSVLEQKLKSLEELSEKVS 170
Cdd:COG3096 293 ELFGARRQLAEEQYRLVEMARELEELSARE----SDLEQDYQAASDHL----NLVQTALRQQEKIERYQEDLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 171 ELKSALIVAEEEGKKSSIQMQEYQEKVSKLES-------SLNQSSARNSELEEDLRiALQKGAEHEDIGNVSTKRSVELQ 243
Cdd:COG3096 365 EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSqladyqqALDVQQTRAIQYQQAVQ-ALEKARALCGLPDLTPENAEDYL 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 244 glfQTSQLKLEKAEEKLKDLE--------AIQVKNSSLEATLSVAMEKERD------------------LSENLNAVMEK 297
Cdd:COG3096 444 ---AAFRAKEQQATEEVLELEqklsvadaARRQFEKAYELVCKIAGEVERSqawqtarellrryrsqqaLAQRLQQLRAQ 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 298 LKSSEERLEKQ--AREIdeattrsieLEALHKHSELKVQKTMEdfssrdteaksLTEKSKDLEEKIRVYEGKLAEACGQS 375
Cdd:COG3096 521 LAELEQRLRQQqnAERL---------LEEFCQRIGQQLDAAEE-----------LEELLAELEAQLEELEEQAAEAVEQR 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 376 LSLQEELDQSSAENELLAD------TNNQLKIKIQELEG--YLDSEKETA-IEKLNQKDTEAKDLITKLKSHENVIEEHK 446
Cdd:COG3096 581 SELRQQLEQLRARIKELAArapawlAAQDALERLREQSGeaLADSQEVTAaMQQLLEREREATVERDELAARKQALESQI 660
|
410 420
....*....|....*....|.
gi 145322975 447 RQVLEASGVADTRKVEVEEAL 467
Cdd:COG3096 661 ERLSQPGGAEDPRLLALAERL 681
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
250-687 |
8.46e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 39.89 E-value: 8.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 250 QLKLEKAEeKLKDLEAiQVKNSS--LEATLSVAMEKERDLSENlnavmEKLKsseERLEKQAREIDEATTrsiELEALHK 327
Cdd:PRK11281 42 QAQLDALN-KQKLLEA-EDKLVQqdLEQTLALLDKIDRQKEET-----EQLK---QQLAQAPAKLRQAQA---ELEALKD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 328 HSELKVQKTMEDFSSRDTEAKsLTEKSKDLEEkirvYEGKLAEACGQSLSLQEELDQssAENELlaDTNNQlkiKIQELE 407
Cdd:PRK11281 109 DNDEETRETLSTLSLRQLESR-LAQTLDQLQN----AQNDLAEYNSQLVSLQTQPER--AQAAL--YANSQ---RLQQIR 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 408 GYLDSEKEtaieklNQKDTEAkDLITKLkshenvieehkrqvleasgvadtrkvEVEEALLklntlestieelekengdl 487
Cdd:PRK11281 177 NLLKGGKV------GGKALRP-SQRVLL--------------------------QAEQALL------------------- 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 488 aEVNIKLNQK-LANQGSETDDFQAKLSVLEAEKYQQAKELQiTIEDL--TKQLTSERERLRSQISSLEEEKNQVNEIyqs 564
Cdd:PRK11281 205 -NAQNDLQRKsLEGNTQLQDLLQKQRDYLTARIQRLEHQLQ-LLQEAinSKRLTLSEKTVQEAQSQDEAARIQANPL--- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 565 tknelvkLQAQLQVDKSKSDDMVSQIEKLSALVAE----KSVLESkFEQVEIHLKEEVE--KVAELTSK-LQEHKHKASD 637
Cdd:PRK11281 280 -------VAQELEINLQLSQRLLKATEKLNTLTQQnlrvKNWLDR-LTQSERNIKEQISvlKGSLLLSRiLYQQQQALPS 351
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 145322975 638 RDVLEEKAIQLhKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAK 687
Cdd:PRK11281 352 ADLIEGLADRI-ADLRLEQFEINQQRDALFQPDAYIDKLEAGHKSEVTDE 400
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
427-661 |
9.15e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.51 E-value: 9.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 427 EAKDLITKLKSHENVIEEHKRQVlEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAevNIKLNQKLANQGSETD 506
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQI-ELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRR--LELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145322975 507 DFQAKLSVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKsksDDM 586
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASA---EEF 382
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145322975 587 VSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKV-AELTSKLQEHKHKASDRDVLEEKAIQLHKELqASHTAISE 661
Cdd:COG4913 383 AALRAEAAALLEALEEELEALEEALAEAEAALRDLrRELRELEAEIASLERRKSNIPARLLALRDAL-AEALGLDE 457
|
|
| |
