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Conserved domains on  [gi|79313263|ref|NP_001030711|]
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Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

Protein Classification

jacalin family lectin; zinc metalloproteinase family protein( domain architecture ID 10477402)

jacalin family lectin is a sugar-binding protein containing a jacalin domain| zinc metalloproteinase family protein contains an HEXXH motif characteristic of metallopeptidases; contains a Jacalin-like lectin domain that may bind mono- or oligosaccharides

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 165-297 8.06e-65

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


:

Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 199.81  E-value: 8.06e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263   165 GTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEIDYPSEYITAVEGTYDKIFGSDGLI 244
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 79313263   245 ITMLRFKTNKQ-TSAPFGLEAGTAFELKEEGHKIVGFHGKASELLHQFGVHVMP 297
Cdd:pfam01419  81 ITSLTFKTNKGrTSPFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 15-144 1.19e-55

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


:

Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 176.31  E-value: 1.19e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    15 SWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVD-ADDYIVAVQVTYDNVFGQDSDIIT 93
Cdd:pfam01419   3 SWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEVIT 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 79313263    94 SITFNTFKGKTSPPYGLETQKKFVLKDKnGGKLVGFHGRAGEALYALGAYF 144
Cdd:pfam01419  83 SLTFKTNKGRTSPFFGTPSGTKFSLEVK-GKKIVGFHGRAGNALNALGAYF 132
 
Name Accession Description Interval E-value
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 165-297 8.06e-65

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 199.81  E-value: 8.06e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263   165 GTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEIDYPSEYITAVEGTYDKIFGSDGLI 244
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 79313263   245 ITMLRFKTNKQ-TSAPFGLEAGTAFELKEEGHKIVGFHGKASELLHQFGVHVMP 297
Cdd:pfam01419  81 ITSLTFKTNKGrTSPFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 15-144 1.19e-55

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 176.31  E-value: 1.19e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    15 SWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVD-ADDYIVAVQVTYDNVFGQDSDIIT 93
Cdd:pfam01419   3 SWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEVIT 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 79313263    94 SITFNTFKGKTSPPYGLETQKKFVLKDKnGGKLVGFHGRAGEALYALGAYF 144
Cdd:pfam01419  83 SLTFKTNKGRTSPFFGTPSGTKFSLEVK-GKKIVGFHGRAGNALNALGAYF 132
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 165-295 9.15e-51

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 163.89  E-value: 9.15e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263 165 GTAWDDGAY-DGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLlGFEEFEIDYPSEYITAVEGTYDKIFGSDgl 243
Cdd:cd09612   1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYPDEYITSVSGTYGPVSGSN-- 77

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 79313263 244 IITMLRFKTNKQTSAPFGLEAGTAFELKEEGHKIVGFHGKASELLHQFGVHV 295
Cdd:cd09612  78 VITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGRSGDYLDAIGVYV 129
PLN02193 PLN02193
nitrile-specifier protein
 1-143 1.43e-45

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 160.12  E-value: 1.43e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    1 MAQKVEAGGGAGGASWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVDADDYIVAVQVT 80
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79313263   81 YDNVFGQDSDIITSITFNTFKGKTSPPYGLETQKKFVLKdknGGKLVGFHGRAGEALYALGAY 143
Cdd:PLN02193  81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQ---GGKIVGFHGRSTDVLHSLGAY 140
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 165-297 2.12e-45

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 150.07  E-value: 2.12e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    165 GTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAEnIVGGEHGKPTLLGFeeFEIDYPSEYITAVEGTYDKIfgsdgLI 244
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKGGK-VWGDEHGGKGGTGE--EILLYPGEYITSVEGTYDKS-----GV 72

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 79313263    245 ITMLRFKTNK-QTSAPFGLEAGTAFELK-EEGHKIVGFHGKASEL-LHQFGVHVMP 297
Cdd:smart00915  73 ITSLTFKTNKgRTSPFGGYEGGTKFVLEsKEGKKIVGFHGRSSGDgLDSLGAYFSP 128
PLN02193 PLN02193
nitrile-specifier protein
 155-299 2.07e-44

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 157.04  E-value: 2.07e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263  155 KKLSAIGGDEGTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEIDyPSEYITAVEGTY 234
Cdd:PLN02193   3 QKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYR 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 79313263  235 DKIFGSDGLIITMLRFKTNK-QTSAPFGLEAGTAFELkeEGHKIVGFHGKASELLHQFGVHV-MPLT 299
Cdd:PLN02193  82 EKVNDMTSEMITFLSFKTYKgKTSHPIEKRPGVKFVL--QGGKIVGFHGRSTDVLHSLGAYIsLPST 146
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 15-144 3.04e-44

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 146.99  E-value: 3.04e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263     15 SWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDsQDVEGGEHGKKTLLGFEtFEVDADDYIVAVQVTYDNvfgqdSDIITS 94
Cdd:smart00915   3 EWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKG-GKVWGDEHGGKGGTGEE-ILLYPGEYITSVEGTYDK-----SGVITS 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 79313263     95 ITFNTFKGKTSPPYGLETQKKFVLKDKNGGKLVGFHGR-AGEALYALGAYF 144
Cdd:smart00915  76 LTFKTNKGRTSPFGGYEGGTKFVLESKEGKKIVGFHGRsSGDGLDSLGAYF 126
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 15-144 4.59e-41

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 138.85  E-value: 4.59e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263  15 SWDDGVH-DGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTlLGFETFEVDA-DDYIVAVQVTYDNVFGqdSDII 92
Cdd:cd09612   3 AWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGG-GTPEEIVLDYpDEYITSVSGTYGPVSG--SNVI 79

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 79313263  93 TSITFNTFKgKTSPPYGLETQKKFVLKdKNGGKLVGFHGRAGEALYALGAYF 144
Cdd:cd09612  80 TSLTFKTNK-RTYGPFGVESGTPFSLP-VEGGKIVGFHGRSGDYLDAIGVYV 129
 
Name Accession Description Interval E-value
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 165-297 8.06e-65

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 199.81  E-value: 8.06e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263   165 GTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEIDYPSEYITAVEGTYDKIFGSDGLI 244
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 79313263   245 ITMLRFKTNKQ-TSAPFGLEAGTAFELKEEGHKIVGFHGKASELLHQFGVHVMP 297
Cdd:pfam01419  81 ITSLTFKTNKGrTSPFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 15-144 1.19e-55

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 176.31  E-value: 1.19e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    15 SWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVD-ADDYIVAVQVTYDNVFGQDSDIIT 93
Cdd:pfam01419   3 SWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEVIT 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 79313263    94 SITFNTFKGKTSPPYGLETQKKFVLKDKnGGKLVGFHGRAGEALYALGAYF 144
Cdd:pfam01419  83 SLTFKTNKGRTSPFFGTPSGTKFSLEVK-GKKIVGFHGRAGNALNALGAYF 132
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 165-295 9.15e-51

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 163.89  E-value: 9.15e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263 165 GTAWDDGAY-DGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLlGFEEFEIDYPSEYITAVEGTYDKIFGSDgl 243
Cdd:cd09612   1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYPDEYITSVSGTYGPVSGSN-- 77

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 79313263 244 IITMLRFKTNKQTSAPFGLEAGTAFELKEEGHKIVGFHGKASELLHQFGVHV 295
Cdd:cd09612  78 VITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGRSGDYLDAIGVYV 129
PLN02193 PLN02193
nitrile-specifier protein
 1-143 1.43e-45

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 160.12  E-value: 1.43e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    1 MAQKVEAGGGAGGASWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVDADDYIVAVQVT 80
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79313263   81 YDNVFGQDSDIITSITFNTFKGKTSPPYGLETQKKFVLKdknGGKLVGFHGRAGEALYALGAY 143
Cdd:PLN02193  81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQ---GGKIVGFHGRSTDVLHSLGAY 140
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 165-297 2.12e-45

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 150.07  E-value: 2.12e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263    165 GTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAEnIVGGEHGKPTLLGFeeFEIDYPSEYITAVEGTYDKIfgsdgLI 244
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKGGK-VWGDEHGGKGGTGE--EILLYPGEYITSVEGTYDKS-----GV 72

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 79313263    245 ITMLRFKTNK-QTSAPFGLEAGTAFELK-EEGHKIVGFHGKASEL-LHQFGVHVMP 297
Cdd:smart00915  73 ITSLTFKTNKgRTSPFGGYEGGTKFVLEsKEGKKIVGFHGRSSGDgLDSLGAYFSP 128
PLN02193 PLN02193
nitrile-specifier protein
 155-299 2.07e-44

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 157.04  E-value: 2.07e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263  155 KKLSAIGGDEGTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEIDyPSEYITAVEGTY 234
Cdd:PLN02193   3 QKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYR 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 79313263  235 DKIFGSDGLIITMLRFKTNK-QTSAPFGLEAGTAFELkeEGHKIVGFHGKASELLHQFGVHV-MPLT 299
Cdd:PLN02193  82 EKVNDMTSEMITFLSFKTYKgKTSHPIEKRPGVKFVL--QGGKIVGFHGRSTDVLHSLGAYIsLPST 146
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 15-144 3.04e-44

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 146.99  E-value: 3.04e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263     15 SWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDsQDVEGGEHGKKTLLGFEtFEVDADDYIVAVQVTYDNvfgqdSDIITS 94
Cdd:smart00915   3 EWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKG-GKVWGDEHGGKGGTGEE-ILLYPGEYITSVEGTYDK-----SGVITS 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 79313263     95 ITFNTFKGKTSPPYGLETQKKFVLKDKNGGKLVGFHGR-AGEALYALGAYF 144
Cdd:smart00915  76 LTFKTNKGRTSPFGGYEGGTKFVLESKEGKKIVGFHGRsSGDGLDSLGAYF 126
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 15-144 4.59e-41

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 138.85  E-value: 4.59e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263  15 SWDDGVH-DGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTlLGFETFEVDA-DDYIVAVQVTYDNVFGqdSDII 92
Cdd:cd09612   3 AWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGG-GTPEEIVLDYpDEYITSVSGTYGPVSG--SNVI 79

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 79313263  93 TSITFNTFKgKTSPPYGLETQKKFVLKdKNGGKLVGFHGRAGEALYALGAYF 144
Cdd:cd09612  80 TSLTFKTNK-RTYGPFGVESGTPFSLP-VEGGKIVGFHGRSGDYLDAIGVYV 129
Jacalin_like cd09302
Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly ...
 165-293 7.55e-05

Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. Taxonomic distribution is not restricted to plants, the domain is also found in various mammalian proteins, for example.


Pssm-ID: 187706  Cd Length: 128  Bit Score: 41.62  E-value: 7.55e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263 165 GTAWDDGAYDG--VKKVYVGQGQDgISAVKFEYNKGAENIVGGEHGKPTllgfEEFEIDyPSEYITAVEGTYDKIfgSDG 242
Cdd:cd09302   1 GKPFSDTGGDGarLTEIRVRSGGA-VDAIRVVLRDYTDGRHGGNGGPNT----SSVFLD-PGEYITITSVSSGDN--GGG 72

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 79313263 243 LIITMLRFKTNKQTSAPFG---LEAGTAFELkEEGHKIVGFHGKASELLHQFGV 293
Cdd:cd09302  73 TRIDAIQFTTNKGRSGTYGttsGALGTEFTV-PVGGEIVGIYGRAGDDVDAFGF 125
Jacalin_like cd09302
Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly ...
 23-141 1.12e-03

Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. Taxonomic distribution is not restricted to plants, the domain is also found in various mammalian proteins, for example.


Pssm-ID: 187706  Cd Length: 128  Bit Score: 38.15  E-value: 1.12e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79313263  23 GVRKVHVGQGQDgVSSINVVYAkdsqDVEGGEHGKKTLLGFETFEVDADDYIVAVQVTYDNVfgQDSDIITSITFNTFKG 102
Cdd:cd09302  13 RLTEIRVRSGGA-VDAIRVVLR----DYTDGRHGGNGGPNTSSVFLDPGEYITITSVSSGDN--GGGTRIDAIQFTTNKG 85

                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 79313263 103 kTSPPYG-LETQKKFVLKDKNGGKLVGFHGRAGEALYALG 141
Cdd:cd09302  86 -RSGTYGtTSGALGTEFTVPVGGEIVGIYGRAGDDVDAFG 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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