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Conserved domains on  [gi|71981903|ref|NP_001024334|]
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G_PROTEIN_RECEP_F1_2 domain-containing protein [Caenorhabditis elegans]

Protein Classification

nucleoside 2-deoxyribosyltransferase domain-containing protein( domain architecture ID 11239559)

nucleoside 2-deoxyribosyltransferase domain-containing protein similar to Drosophila melanogaster protein raw, encoded by a gene member of the Class II dorsal-open group, that plays a role in restriction of epidermal signaling during dorsal closure

SCOP:  4004089

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Nuc_deoxyri_tr2 pfam15891
Nucleoside 2-deoxyribosyltransferase like;
75-162 8.24e-19

Nucleoside 2-deoxyribosyltransferase like;


:

Pssm-ID: 464926  Cd Length: 105  Bit Score: 81.92  E-value: 8.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71981903    75 TYDVFLGGSC---GTTVWRRQsVIPFLKKRGITYYDPQRSFWSENM------------IYEESIAKESSSLFLFVIDPAT 139
Cdd:pfam15891   1 KYSVFLAGSIfsgAETDWRED-LAEALSALGITVFNPQRDDWDSSWeedrsdppfreqVEWELEALENADVVVFVFDGAT 79

                          90       100
                  ....*....|....*....|...
gi 71981903   140 VNATSFLEIAYFAARKspKLVVV 162
Cdd:pfam15891  80 SAPISLLELGLAAASG--KAVVL 100
 
Name Accession Description Interval E-value
Nuc_deoxyri_tr2 pfam15891
Nucleoside 2-deoxyribosyltransferase like;
75-162 8.24e-19

Nucleoside 2-deoxyribosyltransferase like;


Pssm-ID: 464926  Cd Length: 105  Bit Score: 81.92  E-value: 8.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71981903    75 TYDVFLGGSC---GTTVWRRQsVIPFLKKRGITYYDPQRSFWSENM------------IYEESIAKESSSLFLFVIDPAT 139
Cdd:pfam15891   1 KYSVFLAGSIfsgAETDWRED-LAEALSALGITVFNPQRDDWDSSWeedrsdppfreqVEWELEALENADVVVFVFDGAT 79

                          90       100
                  ....*....|....*....|...
gi 71981903   140 VNATSFLEIAYFAARKspKLVVV 162
Cdd:pfam15891  80 SAPISLLELGLAAASG--KAVVL 100
 
Name Accession Description Interval E-value
Nuc_deoxyri_tr2 pfam15891
Nucleoside 2-deoxyribosyltransferase like;
75-162 8.24e-19

Nucleoside 2-deoxyribosyltransferase like;


Pssm-ID: 464926  Cd Length: 105  Bit Score: 81.92  E-value: 8.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71981903    75 TYDVFLGGSC---GTTVWRRQsVIPFLKKRGITYYDPQRSFWSENM------------IYEESIAKESSSLFLFVIDPAT 139
Cdd:pfam15891   1 KYSVFLAGSIfsgAETDWRED-LAEALSALGITVFNPQRDDWDSSWeedrsdppfreqVEWELEALENADVVVFVFDGAT 79

                          90       100
                  ....*....|....*....|...
gi 71981903   140 VNATSFLEIAYFAARKspKLVVV 162
Cdd:pfam15891  80 SAPISLLELGLAAASG--KAVVL 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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