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Conserved domains on  [gi|212549544|ref|NP_001020182|]
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uncharacterized protein C15orf39 homolog [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF5525 pfam17663
Family of unknown function (DUF5525); This is a family of unknown function found in Chordata.
1-1034 0e+00

Family of unknown function (DUF5525); This is a family of unknown function found in Chordata.


:

Pssm-ID: 435956  Cd Length: 1023  Bit Score: 1556.46  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544     1 MAEKRPLGPLGPMMYGKLPRLESDLGPGHGLPLSAGNQDSCNYKGAYFSCPIGGTSKAGSERLASWTPYPSLYPSGVAGS 80
Cdd:pfam17663    1 MAEKRPLGTLGPVMYGKLPRLEADSGPGHSLPPSAGNQDPCSYKGAYFSCPMGGTPKAGSERLASWTPYPPLYPTSMAGP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544    81 PIRGDSLLTNCLLYRPPTEGSEKMQDSS--ELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGDGAAKRPLDVDWT 158
Cdd:pfam17663   81 PLRTDNLLTSCLLYRPPAESSEKVQDSGpvELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGEGAAKRPLDVDWT 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   159 LVPGPLLPSADPPCSLATAPGKGQPLDGTFLRGLPSGGPGKDSSLTFSPCQTFLEKYRTVQSTGFLASKYPGPYSGDPKQ 238
Cdd:pfam17663  161 LVTGPLLPPADPPCSLAPAPGKGQSLDGTFLRGVPAGGSGKDSSGSFSPCQAFLEKYQTIHSTGFLASKYAGPYSGDPKQ 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   239 AMSEGPSGPWTQLTQPLGPPCQDAVPAHYPLPPPPQALPCPPSCRHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYL 318
Cdd:pfam17663  241 ALSEGPPSPWTQLAQPLGPACQDTVPTHYPLPHPPQALPCPPACRHPEKQGSYSSVLPLQPLGAHKGAGYPAGGLGSPYL 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   319 RQQAAQTPYMPPVGIDSYPYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLSFPYARDDLSLYGASPGLGETPPshSQNS 398
Cdd:pfam17663  321 RQQAAQTPYMPPVGLDTYSYPSAPLPAPSPGLKLEPPLAPRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPP--SQNS 398
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   399 VQPVPQPGAFQRTCQPLPAGQPCSEPMRPAEKPTPEAQEKTWLPSCRKEQLQSRPSERPGVPIVIRDSPVPRTSPALHPC 478
Cdd:pfam17663  399 VQAVPQPGAFQRTCQPLPASQPCSEPVRPVEKPVQEAEEKTWLPSCRKEQLQPRLSEHPGAPIVIGDSPVPRTPPALPPC 478
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   479 AKERQSLPQKD-ARPPSSPPMPVIDNVFSLAPYRDYLDVQTPEPTVEQDSAPATSKSQDKDCKETLPVQDGASRPHRSLR 557
Cdd:pfam17663  479 AQERQSLPQNDgALPPSSPPMPVIDNVFSLAPYRDYLDVQAPEATAEPDPAPATNESHDKDCRGTLPAQEAPSGPHCSLR 558
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   558 EEVALDLSVKKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTASGLPGLKKMVTE-----IPEVTAEATPRTNFHSSVAF 632
Cdd:pfam17663  559 EEVALDLSVKKPMAEASPIKVPSPVEHAKPTAAVDVPGVGNTVSDLPGLKKAVTEapglpGVPVTTEATPRTNFHSSVAF 638
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   633 MFRKFKILRPAPLPAAIvpspptpvsvpaptpvPVPVPVPVPVPAQPASNPPSVPMGLQILTQPLPVACFNLALPSPPAI 712
Cdd:pfam17663  639 MFRKFKILRPAPLPAAV----------------VPSVPTSAPAPAQPAPTPTSVPIGLQILTQPLPVACFNLALPSPPAV 702
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   713 AVASPAPASAPPPSPAPAPASGPAPASaqVPTAAPVYS-EQHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAA 791
Cdd:pfam17663  703 AVASPAPALAPAPSPAPAPAPAAGPAP--ASTPATVDSpEQHFTGLHASLCDAISGSVAHSPPEKLREWLETAGPWGRAA 780
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   792 WQDGQGVQGLLGRLLSQLQKFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDHRVELRPTTLSEERAL 871
Cdd:pfam17663  781 WQDCQGVQGLLGKLLSQLQRFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERAL 860
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   872 RERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGGFDTEARALSPSEPTVTRDEPESQVLAGKLPAPKAKKP 951
Cdd:pfam17663  861 RERALHGCTSRMLKLLALRQLPDIYPDLLGLQWRDCVRRQLGDFDTEAGAVPSSEPTMARDEPESLALAQKSPAPKARKP 940
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   952 GKKPPTPGPEKTETTTGEGSCNPSPSSGASTSPPGPTLRARFRNLLETAWLNGVALPTWGHKASGADRPSPHPQLLGSQT 1031
Cdd:pfam17663  941 GRKPPTPGPEKAEATAGEGSCGASPTPAASTSPPGPTLRARFRSLLETAWLNGLALPTWGHKASGPDRPSPCPQLLGSQS 1020

                   ...
gi 212549544  1032 HHL 1034
Cdd:pfam17663 1021 HHL 1023
 
Name Accession Description Interval E-value
DUF5525 pfam17663
Family of unknown function (DUF5525); This is a family of unknown function found in Chordata.
1-1034 0e+00

Family of unknown function (DUF5525); This is a family of unknown function found in Chordata.


Pssm-ID: 435956  Cd Length: 1023  Bit Score: 1556.46  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544     1 MAEKRPLGPLGPMMYGKLPRLESDLGPGHGLPLSAGNQDSCNYKGAYFSCPIGGTSKAGSERLASWTPYPSLYPSGVAGS 80
Cdd:pfam17663    1 MAEKRPLGTLGPVMYGKLPRLEADSGPGHSLPPSAGNQDPCSYKGAYFSCPMGGTPKAGSERLASWTPYPPLYPTSMAGP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544    81 PIRGDSLLTNCLLYRPPTEGSEKMQDSS--ELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGDGAAKRPLDVDWT 158
Cdd:pfam17663   81 PLRTDNLLTSCLLYRPPAESSEKVQDSGpvELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGEGAAKRPLDVDWT 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   159 LVPGPLLPSADPPCSLATAPGKGQPLDGTFLRGLPSGGPGKDSSLTFSPCQTFLEKYRTVQSTGFLASKYPGPYSGDPKQ 238
Cdd:pfam17663  161 LVTGPLLPPADPPCSLAPAPGKGQSLDGTFLRGVPAGGSGKDSSGSFSPCQAFLEKYQTIHSTGFLASKYAGPYSGDPKQ 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   239 AMSEGPSGPWTQLTQPLGPPCQDAVPAHYPLPPPPQALPCPPSCRHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYL 318
Cdd:pfam17663  241 ALSEGPPSPWTQLAQPLGPACQDTVPTHYPLPHPPQALPCPPACRHPEKQGSYSSVLPLQPLGAHKGAGYPAGGLGSPYL 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   319 RQQAAQTPYMPPVGIDSYPYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLSFPYARDDLSLYGASPGLGETPPshSQNS 398
Cdd:pfam17663  321 RQQAAQTPYMPPVGLDTYSYPSAPLPAPSPGLKLEPPLAPRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPP--SQNS 398
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   399 VQPVPQPGAFQRTCQPLPAGQPCSEPMRPAEKPTPEAQEKTWLPSCRKEQLQSRPSERPGVPIVIRDSPVPRTSPALHPC 478
Cdd:pfam17663  399 VQAVPQPGAFQRTCQPLPASQPCSEPVRPVEKPVQEAEEKTWLPSCRKEQLQPRLSEHPGAPIVIGDSPVPRTPPALPPC 478
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   479 AKERQSLPQKD-ARPPSSPPMPVIDNVFSLAPYRDYLDVQTPEPTVEQDSAPATSKSQDKDCKETLPVQDGASRPHRSLR 557
Cdd:pfam17663  479 AQERQSLPQNDgALPPSSPPMPVIDNVFSLAPYRDYLDVQAPEATAEPDPAPATNESHDKDCRGTLPAQEAPSGPHCSLR 558
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   558 EEVALDLSVKKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTASGLPGLKKMVTE-----IPEVTAEATPRTNFHSSVAF 632
Cdd:pfam17663  559 EEVALDLSVKKPMAEASPIKVPSPVEHAKPTAAVDVPGVGNTVSDLPGLKKAVTEapglpGVPVTTEATPRTNFHSSVAF 638
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   633 MFRKFKILRPAPLPAAIvpspptpvsvpaptpvPVPVPVPVPVPAQPASNPPSVPMGLQILTQPLPVACFNLALPSPPAI 712
Cdd:pfam17663  639 MFRKFKILRPAPLPAAV----------------VPSVPTSAPAPAQPAPTPTSVPIGLQILTQPLPVACFNLALPSPPAV 702
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   713 AVASPAPASAPPPSPAPAPASGPAPASaqVPTAAPVYS-EQHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAA 791
Cdd:pfam17663  703 AVASPAPALAPAPSPAPAPAPAAGPAP--ASTPATVDSpEQHFTGLHASLCDAISGSVAHSPPEKLREWLETAGPWGRAA 780
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   792 WQDGQGVQGLLGRLLSQLQKFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDHRVELRPTTLSEERAL 871
Cdd:pfam17663  781 WQDCQGVQGLLGKLLSQLQRFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERAL 860
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   872 RERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGGFDTEARALSPSEPTVTRDEPESQVLAGKLPAPKAKKP 951
Cdd:pfam17663  861 RERALHGCTSRMLKLLALRQLPDIYPDLLGLQWRDCVRRQLGDFDTEAGAVPSSEPTMARDEPESLALAQKSPAPKARKP 940
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   952 GKKPPTPGPEKTETTTGEGSCNPSPSSGASTSPPGPTLRARFRNLLETAWLNGVALPTWGHKASGADRPSPHPQLLGSQT 1031
Cdd:pfam17663  941 GRKPPTPGPEKAEATAGEGSCGASPTPAASTSPPGPTLRARFRSLLETAWLNGLALPTWGHKASGPDRPSPCPQLLGSQS 1020

                   ...
gi 212549544  1032 HHL 1034
Cdd:pfam17663 1021 HHL 1023
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
384-619 1.40e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 45.84  E-value: 1.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  384 SPGLGETPPSHSQNSVQPVPQPGAFQRTCQ-PLPAGQP-----CSEPMRPAEKPTPEAQEKTWLPSCRKEQLQSRPSERP 457
Cdd:PTZ00449  542 EPKEGGKPGETKEGEVGKKPGPAKEHKPSKiPTLSKKPefpkdPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIP 621
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  458 GVPIVIRDSPVPRTSPA-LHPCAKERQSLPQ--KDARPPSSPPMPvIDNVFSLAPYRDYLDVQTpePTVEQDSAPATSKS 534
Cdd:PTZ00449  622 KSPKRPESPKSPKRPPPpQRPSSPERPEGPKiiKSPKPPKSPKPP-FDPKFKEKFYDDYLDAAA--KSKETKTTVVLDES 698
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  535 QDKDCKETLPVQDGAS-RPHRSLREEVALDLSVKKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTA-SGLPGLKKMVTE 612
Cdd:PTZ00449  699 FESILKETLPETPGTPfTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPAdTPLPDILAEEFK 778

                  ....*..
gi 212549544  613 IPEVTAE 619
Cdd:PTZ00449  779 EEDIHAE 785
 
Name Accession Description Interval E-value
DUF5525 pfam17663
Family of unknown function (DUF5525); This is a family of unknown function found in Chordata.
1-1034 0e+00

Family of unknown function (DUF5525); This is a family of unknown function found in Chordata.


Pssm-ID: 435956  Cd Length: 1023  Bit Score: 1556.46  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544     1 MAEKRPLGPLGPMMYGKLPRLESDLGPGHGLPLSAGNQDSCNYKGAYFSCPIGGTSKAGSERLASWTPYPSLYPSGVAGS 80
Cdd:pfam17663    1 MAEKRPLGTLGPVMYGKLPRLEADSGPGHSLPPSAGNQDPCSYKGAYFSCPMGGTPKAGSERLASWTPYPPLYPTSMAGP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544    81 PIRGDSLLTNCLLYRPPTEGSEKMQDSS--ELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGDGAAKRPLDVDWT 158
Cdd:pfam17663   81 PLRTDNLLTSCLLYRPPAESSEKVQDSGpvELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGEGAAKRPLDVDWT 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   159 LVPGPLLPSADPPCSLATAPGKGQPLDGTFLRGLPSGGPGKDSSLTFSPCQTFLEKYRTVQSTGFLASKYPGPYSGDPKQ 238
Cdd:pfam17663  161 LVTGPLLPPADPPCSLAPAPGKGQSLDGTFLRGVPAGGSGKDSSGSFSPCQAFLEKYQTIHSTGFLASKYAGPYSGDPKQ 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   239 AMSEGPSGPWTQLTQPLGPPCQDAVPAHYPLPPPPQALPCPPSCRHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYL 318
Cdd:pfam17663  241 ALSEGPPSPWTQLAQPLGPACQDTVPTHYPLPHPPQALPCPPACRHPEKQGSYSSVLPLQPLGAHKGAGYPAGGLGSPYL 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   319 RQQAAQTPYMPPVGIDSYPYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLSFPYARDDLSLYGASPGLGETPPshSQNS 398
Cdd:pfam17663  321 RQQAAQTPYMPPVGLDTYSYPSAPLPAPSPGLKLEPPLAPRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPP--SQNS 398
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   399 VQPVPQPGAFQRTCQPLPAGQPCSEPMRPAEKPTPEAQEKTWLPSCRKEQLQSRPSERPGVPIVIRDSPVPRTSPALHPC 478
Cdd:pfam17663  399 VQAVPQPGAFQRTCQPLPASQPCSEPVRPVEKPVQEAEEKTWLPSCRKEQLQPRLSEHPGAPIVIGDSPVPRTPPALPPC 478
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   479 AKERQSLPQKD-ARPPSSPPMPVIDNVFSLAPYRDYLDVQTPEPTVEQDSAPATSKSQDKDCKETLPVQDGASRPHRSLR 557
Cdd:pfam17663  479 AQERQSLPQNDgALPPSSPPMPVIDNVFSLAPYRDYLDVQAPEATAEPDPAPATNESHDKDCRGTLPAQEAPSGPHCSLR 558
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   558 EEVALDLSVKKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTASGLPGLKKMVTE-----IPEVTAEATPRTNFHSSVAF 632
Cdd:pfam17663  559 EEVALDLSVKKPMAEASPIKVPSPVEHAKPTAAVDVPGVGNTVSDLPGLKKAVTEapglpGVPVTTEATPRTNFHSSVAF 638
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   633 MFRKFKILRPAPLPAAIvpspptpvsvpaptpvPVPVPVPVPVPAQPASNPPSVPMGLQILTQPLPVACFNLALPSPPAI 712
Cdd:pfam17663  639 MFRKFKILRPAPLPAAV----------------VPSVPTSAPAPAQPAPTPTSVPIGLQILTQPLPVACFNLALPSPPAV 702
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   713 AVASPAPASAPPPSPAPAPASGPAPASaqVPTAAPVYS-EQHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAA 791
Cdd:pfam17663  703 AVASPAPALAPAPSPAPAPAPAAGPAP--ASTPATVDSpEQHFTGLHASLCDAISGSVAHSPPEKLREWLETAGPWGRAA 780
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   792 WQDGQGVQGLLGRLLSQLQKFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDHRVELRPTTLSEERAL 871
Cdd:pfam17663  781 WQDCQGVQGLLGKLLSQLQRFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERAL 860
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   872 RERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGGFDTEARALSPSEPTVTRDEPESQVLAGKLPAPKAKKP 951
Cdd:pfam17663  861 RERALHGCTSRMLKLLALRQLPDIYPDLLGLQWRDCVRRQLGDFDTEAGAVPSSEPTMARDEPESLALAQKSPAPKARKP 940
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544   952 GKKPPTPGPEKTETTTGEGSCNPSPSSGASTSPPGPTLRARFRNLLETAWLNGVALPTWGHKASGADRPSPHPQLLGSQT 1031
Cdd:pfam17663  941 GRKPPTPGPEKAEATAGEGSCGASPTPAASTSPPGPTLRARFRSLLETAWLNGLALPTWGHKASGPDRPSPCPQLLGSQS 1020

                   ...
gi 212549544  1032 HHL 1034
Cdd:pfam17663 1021 HHL 1023
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
384-619 1.40e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 45.84  E-value: 1.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  384 SPGLGETPPSHSQNSVQPVPQPGAFQRTCQ-PLPAGQP-----CSEPMRPAEKPTPEAQEKTWLPSCRKEQLQSRPSERP 457
Cdd:PTZ00449  542 EPKEGGKPGETKEGEVGKKPGPAKEHKPSKiPTLSKKPefpkdPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIP 621
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  458 GVPIVIRDSPVPRTSPA-LHPCAKERQSLPQ--KDARPPSSPPMPvIDNVFSLAPYRDYLDVQTpePTVEQDSAPATSKS 534
Cdd:PTZ00449  622 KSPKRPESPKSPKRPPPpQRPSSPERPEGPKiiKSPKPPKSPKPP-FDPKFKEKFYDDYLDAAA--KSKETKTTVVLDES 698
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  535 QDKDCKETLPVQDGAS-RPHRSLREEVALDLSVKKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTA-SGLPGLKKMVTE 612
Cdd:PTZ00449  699 FESILKETLPETPGTPfTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPAdTPLPDILAEEFK 778

                  ....*..
gi 212549544  613 IPEVTAE 619
Cdd:PTZ00449  779 EEDIHAE 785
PHA03379 PHA03379
EBNA-3A; Provisional
322-516 7.84e-03

EBNA-3A; Provisional


Pssm-ID: 223066 [Multi-domain]  Cd Length: 935  Bit Score: 40.43  E-value: 7.84e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  322 AAQTPYMPPV-GIDSYPYSSAPLPAPSPGLKLEP-PLAPRCPLDFVP-------------QTLSFPYARDDLSLYGASPG 386
Cdd:PHA03379  439 SAQVPEPPPVhDLEPGPLHDQHSMAPCPVAQLPPgPLQDLEPGDQLPgvvqdgrpacapvPAPAGPIVRPWEASLSQVPG 518
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212549544  387 LGETPPSHSQNSVQPVPQPG-AFQRTCQPLPagqPCSEPMRPAEKPTPEAQEKTWLPSCrkeqlQSRPSERPGVPIVIRD 465
Cdd:PHA03379  519 VAFAPVMPQPMPVEPVPVPTvALERPVCPAP---PLIAMQGPGETSGIVRVRERWRPAP-----WTPNPPRSPSQMSVRD 590
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 212549544  466 SPV---PRTSPALHPCAKERQSLPQKDARPPSSPPMPVIDNVFSLAPYRDYLDV 516
Cdd:PHA03379  591 RLArlrAEAQPYQASVEVQPPQLTQVSPQQPMEYPLEPEQQMFPGSPFSQVADV 644
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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