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Conserved domains on  [gi|442634395|ref|NP_001015386|]
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glycoprotein hormone beta 5, isoform D [Drosophila melanogaster]

Protein Classification

GHB_like domain-containing protein( domain architecture ID 10049220)

GHB_like domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GHB_like cd00069
Glycoprotein hormone beta chain homologues; This family of cystine-knot hormones includes the ...
 12-111 3.71e-28

Glycoprotein hormone beta chain homologues; This family of cystine-knot hormones includes the beta chains of gonadotropins, thyrotropins, follitropins, choriogonadotropins and more. The members are reproductive hormones that consist of two glycosylated chains (alpha and beta), which form a tightly bound dimer.


:

Pssm-ID: 200450  Cd Length: 96  Bit Score: 99.28  E-value: 3.71e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442634395  12 CHRRVYTYKVTQSdlqghEC--WDYVSVWSCWGRCDSSEISDWKFPYKRSFHPVCVHAQRQLVVAILKNCHPkaeDSVSK 89
Cdd:cd00069    1 CHPRNYTIAVEKE-----GCgvCLAINTTICAGRCDTRDPVYKSPPYKPSHQPVCTYDEWRYETVRLPGCPP---GVDPT 72

                         90       100
                 ....*....|....*....|..
gi 442634395  90 YQYMEAVNCHCQTCSTQDTSCE 111
Cdd:cd00069   73 YTYPVALSCRCGLCNTDTTDCT 94
 
Name Accession Description Interval E-value
GHB_like cd00069
Glycoprotein hormone beta chain homologues; This family of cystine-knot hormones includes the ...
 12-111 3.71e-28

Glycoprotein hormone beta chain homologues; This family of cystine-knot hormones includes the beta chains of gonadotropins, thyrotropins, follitropins, choriogonadotropins and more. The members are reproductive hormones that consist of two glycosylated chains (alpha and beta), which form a tightly bound dimer.


Pssm-ID: 200450  Cd Length: 96  Bit Score: 99.28  E-value: 3.71e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442634395  12 CHRRVYTYKVTQSdlqghEC--WDYVSVWSCWGRCDSSEISDWKFPYKRSFHPVCVHAQRQLVVAILKNCHPkaeDSVSK 89
Cdd:cd00069    1 CHPRNYTIAVEKE-----GCgvCLAINTTICAGRCDTRDPVYKSPPYKPSHQPVCTYDEWRYETVRLPGCPP---GVDPT 72

                         90       100
                 ....*....|....*....|..
gi 442634395  90 YQYMEAVNCHCQTCSTQDTSCE 111
Cdd:cd00069   73 YTYPVALSCRCGLCNTDTTDCT 94
 
Name Accession Description Interval E-value
GHB_like cd00069
Glycoprotein hormone beta chain homologues; This family of cystine-knot hormones includes the ...
 12-111 3.71e-28

Glycoprotein hormone beta chain homologues; This family of cystine-knot hormones includes the beta chains of gonadotropins, thyrotropins, follitropins, choriogonadotropins and more. The members are reproductive hormones that consist of two glycosylated chains (alpha and beta), which form a tightly bound dimer.


Pssm-ID: 200450  Cd Length: 96  Bit Score: 99.28  E-value: 3.71e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442634395  12 CHRRVYTYKVTQSdlqghEC--WDYVSVWSCWGRCDSSEISDWKFPYKRSFHPVCVHAQRQLVVAILKNCHPkaeDSVSK 89
Cdd:cd00069    1 CHPRNYTIAVEKE-----GCgvCLAINTTICAGRCDTRDPVYKSPPYKPSHQPVCTYDEWRYETVRLPGCPP---GVDPT 72

                         90       100
                 ....*....|....*....|..
gi 442634395  90 YQYMEAVNCHCQTCSTQDTSCE 111
Cdd:cd00069   73 YTYPVALSCRCGLCNTDTTDCT 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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