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Conserved domains on  [gi|62244044|ref|NP_001014446|]
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OCIA domain-containing protein 2 isoform 1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OCIA super family cl06199
Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian ...
 33-117 5.60e-30

Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam07051:

Pssm-ID: 462073  Cd Length: 87  Bit Score: 104.30  E-value: 5.60e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62244044    33 HIHRAEISKIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKVALAGLLGFGLGKVSYIGVCQSKFHF 112
Cdd:pfam07051   3 YIFSEEERKVLRECNEESFWQRSLPLSLMSGLVTYALVNKGYLSSSPRFGALPKVVFAGLLGYFGGKLSYQKCCAEKFMR 82


                  ....*
gi 62244044   113 FEDQL 117
Cdd:pfam07051  83 LPNSP 87
 
Name Accession Description Interval E-value
OCIA pfam07051
Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian ...
 33-117 5.60e-30

Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown.


Pssm-ID: 462073  Cd Length: 87  Bit Score: 104.30  E-value: 5.60e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62244044    33 HIHRAEISKIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKVALAGLLGFGLGKVSYIGVCQSKFHF 112
Cdd:pfam07051   3 YIFSEEERKVLRECNEESFWQRSLPLSLMSGLVTYALVNKGYLSSSPRFGALPKVVFAGLLGYFGGKLSYQKCCAEKFMR 82


                  ....*
gi 62244044   113 FEDQL 117
Cdd:pfam07051  83 LPNSP 87
 
Name Accession Description Interval E-value
OCIA pfam07051
Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian ...
 33-117 5.60e-30

Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown.


Pssm-ID: 462073  Cd Length: 87  Bit Score: 104.30  E-value: 5.60e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62244044    33 HIHRAEISKIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKVALAGLLGFGLGKVSYIGVCQSKFHF 112
Cdd:pfam07051   3 YIFSEEERKVLRECNEESFWQRSLPLSLMSGLVTYALVNKGYLSSSPRFGALPKVVFAGLLGYFGGKLSYQKCCAEKFMR 82


                  ....*
gi 62244044   113 FEDQL 117
Cdd:pfam07051  83 LPNSP 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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