NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|61557408|ref|NP_001013260|]
View 

dnaJ homolog subfamily C member 5G [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 10446266)

J domain-containing protein containing a similar domain as DnaJ, a protein that plays crucial roles in protein translation, folding, unfolding, translocation, and degradation, primarily by stimulating the ATPase activity of Hsp70.

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  35729039|9644977|8016869|15170475
SCOP:  4000605

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 17-79 1.30e-30

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 105.63  E-value: 1.30e-30
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 61557408    17 SLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 17-79 1.30e-30

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 105.63  E-value: 1.30e-30
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 61557408    17 SLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 19-82 5.46e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 109.46  E-value: 5.46e-29
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 19-90 1.18e-27

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 100.55  E-value: 1.18e-27
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 61557408  19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGLYLYD 90
Cdd:COG0484   3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLA 74
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 19-86 1.07e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 103.06  E-value: 1.07e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408    19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 19-71 7.36e-23

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 85.67  E-value: 7.36e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 61557408  19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTD 71
Cdd:cd06257   3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
16-74 6.32e-22

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 83.44  E-value: 6.32e-22
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408     16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGN-SQAAEFFKDINAAHAVLTDPTK 74
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSDPEK 60
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 17-79 1.30e-30

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 105.63  E-value: 1.30e-30
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 61557408    17 SLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 19-82 5.46e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 109.46  E-value: 5.46e-29
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 19-90 1.18e-27

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 100.55  E-value: 1.18e-27
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 61557408  19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGLYLYD 90
Cdd:COG0484   3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLA 74
PRK14297 PRK14297
molecular chaperone DnaJ;
16-83 4.02e-27

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 104.87  E-value: 4.02e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGS 83
Cdd:PRK14297   4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGT 71
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 19-86 1.07e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 103.06  E-value: 1.07e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408    19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 19-87 7.89e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 98.76  E-value: 7.89e-25
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGLY 87
Cdd:PRK14284   4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPF 72
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 19-86 3.06e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 96.76  E-value: 3.06e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PRK14294   7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL 74
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 14-82 3.42e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 96.79  E-value: 3.42e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 61557408   14 DGKSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK14277   3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFG 71
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 19-76 5.52e-23

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 86.21  E-value: 5.52e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408  19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKK 76
Cdd:COG5407   3 YEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKRA 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 19-71 7.36e-23

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 85.67  E-value: 7.36e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 61557408  19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTD 71
Cdd:cd06257   3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
PRK14289 PRK14289
molecular chaperone DnaJ;
19-86 2.01e-22

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 92.20  E-value: 2.01e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PRK14289   8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75
PRK14279 PRK14279
molecular chaperone DnaJ;
16-79 2.58e-22

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 91.72  E-value: 2.58e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYD 79
Cdd:PRK14279   9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 16-86 3.24e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 91.41  E-value: 3.24e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PRK14281   3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73
DnaJ smart00271
DnaJ molecular chaperone homology domain;
16-74 6.32e-22

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 83.44  E-value: 6.32e-22
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408     16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGN-SQAAEFFKDINAAHAVLTDPTK 74
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSDPEK 60
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 19-82 1.21e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 89.73  E-value: 1.21e-21
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK14278   6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGG 68
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 19-93 1.55e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 89.42  E-value: 1.55e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGLYLYDHFG 93
Cdd:PRK14301   7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFG 81
PRK14295 PRK14295
molecular chaperone DnaJ;
16-99 1.85e-21

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 89.52  E-value: 1.85e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLglylydhFGEE 95
Cdd:PRK14295   9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSL-------FGNG 81


                 ....
gi 61557408   96 GVRT 99
Cdd:PRK14295  82 GFRP 85
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 16-86 3.38e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 88.51  E-value: 3.38e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PRK14286   4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 16-104 3.49e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 88.67  E-value: 3.49e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGLY--LYDHFG 93
Cdd:PRK14291   3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSgsGQQQQG 81

                         90
                 ....*....|.
gi 61557408   94 EEGVRTYFIVN 104
Cdd:PRK14291  82 QEGFSDFGGGN 92
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 16-83 1.10e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 86.15  E-value: 1.10e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPD--KNPGnsqAAEFFKDINAAHAVLTDPTKKKIYDRHGS 83
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDvnKSPG---AEEKFKEINEAYTVLSDPEKRRIYDTYGT 70
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 19-86 1.63e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 86.83  E-value: 1.63e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKN--PGnsqAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PRK14298   8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKNkePD---AEEKFKEISEAYAVLSDAEKRAQYDRFGHAGI 74
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 14-86 7.68e-20

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 85.26  E-value: 7.68e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 61557408   14 DGKSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKnpGNSQaaEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PTZ00037  26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK--GGDP--EKFKEISRAYEVLSDPEKRKIYDEYGEEGL 94
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
14-80 7.20e-19

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 76.68  E-value: 7.20e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408  14 DGKSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGN-SQAAEFFKDINAAHAVLTDPTKKKIYDR 80
Cdd:COG2214   3 DLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELkALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 16-82 1.41e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 81.19  E-value: 1.41e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK14285   3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFG 69
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 19-96 3.41e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 80.32  E-value: 3.41e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSL---GLYLYDHFGEE 95
Cdd:PRK14292   5 YELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTApgaGMPGGDPFGGM 83


                 .
gi 61557408   96 G 96
Cdd:PRK14292  84 G 84
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 16-85 3.94e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 80.22  E-value: 3.94e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAE-FFKDINAAHAVLTDPTKKKIYDRHGSLG 85
Cdd:PRK14282   4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEqKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 16-83 8.40e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 79.20  E-value: 8.40e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQ-AAEFFKDINAAHAVLTDPTKKKIYDRHGS 83
Cdd:PRK14290   3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAeAEEKFKEISEAYEVLSDPQKRRQYDQTGT 71
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 14-95 1.49e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 78.33  E-value: 1.49e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   14 DGKSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGLylyDHFG 93
Cdd:PRK14283   3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM---DGFS 78


                 ..
gi 61557408   94 EE 95
Cdd:PRK14283  79 QE 80
PRK14288 PRK14288
molecular chaperone DnaJ;
17-86 1.56e-17

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 78.58  E-value: 1.56e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   17 SLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PRK14288   4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGL 73
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 18-85 1.72e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 78.21  E-value: 1.72e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   18 LYAVLELKKGAQPEEIKKAYRKLALQYHPDKN--PGnsqAAEFFKDINAAHAVLTDPTKKKIYDRHGSLG 85
Cdd:PRK14276   6 YYDRLGVSKDASQDEIKKAYRKLSKKYHPDINkePG---AEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72
PRK14293 PRK14293
molecular chaperone DnaJ;
19-97 1.99e-17

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 78.11  E-value: 1.99e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPD--KNPGnsqAAEFFKDINAAHAVLTDPTKKKIYDRhgslglylydhFGEEG 96
Cdd:PRK14293   6 YEILGVSRDADKDELKRAYRRLARKYHPDvnKEPG---AEDRFKEINRAYEVLSDPETRARYDQ-----------FGEAG 71


                 .
gi 61557408   97 V 97
Cdd:PRK14293  72 V 72
PRK14280 PRK14280
molecular chaperone DnaJ;
19-85 4.39e-17

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 77.07  E-value: 4.39e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHGSLG 85
Cdd:PRK14280   7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 16-82 3.68e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 66.12  E-value: 3.68e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK14296   4 KDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFG 69
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 19-82 1.38e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 64.27  E-value: 1.38e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDkNPGNSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK14300   6 YQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 16-82 3.73e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 63.10  E-value: 3.73e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGnSQAAEFFKDINAAHAVLTDPTKKKIYDRHG 82
Cdd:PRK14287   4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
19-72 2.79e-09

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 50.95  E-value: 2.79e-09
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 61557408  19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNS------QAAEFFKDINAAHAVLTDP 72
Cdd:COG1076   7 FELLGLPPDADDAELKRAYRKLQREHHPDRLAAGLpeeeqrLALQKAAAINEAYETLKDP 66
PRK10266 PRK10266
curved DNA-binding protein;
16-80 5.85e-09

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 53.67  E-value: 5.85e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 61557408   16 KSLYAVLELKKGAQPEEIKKAYRKLALQYHPDKNPgNSQAAEFFKDINAAHAVLTDPTKKKIYDR 80
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQ 67
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 18-79 9.46e-09

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 53.50  E-value: 9.46e-09
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 61557408  18 LYAVLELKK---GAQPEEIKKAYRKLALQYHPDKNP--GNSQAAEFFKDINAAHAVLTDPTKKKIYD 79
Cdd:COG5269  45 LYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAagGNKGCDEFFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
19-48 2.50e-07

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 49.04  E-value: 2.50e-07
                         10        20        30
                 ....*....|....*....|....*....|
gi 61557408   19 YAVLELKKGAQPEEIKKAYRKLALQYHPDK 48
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 19-86 1.67e-06

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 47.09  E-value: 1.67e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 61557408    19 YAVLELKKGAQPEEIKKAYRKLALQYHPDKNPGNSQAAEfFKDINAAHAVLTDPTKKKIYDRHGSLGL 86
Cdd:PTZ00341  576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHK-FKKINEAYQILGDIDKKKMYNKFGYDGI 642
PHA03102 PHA03102
Small T antigen; Reviewed
 33-48 5.11e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 35.80  E-value: 5.11e-03
                         10
                 ....*....|....*.
gi 61557408   33 IKKAYRKLALQYHPDK 48
Cdd:PHA03102  24 MRKAYLRKCLEFHPDK 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH