|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
38-225 |
1.38e-29 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 114.26 E-value: 1.38e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 38 SNLRTIDLSNNKIDSLPPlIIGKFTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNHLRELPSSFGQLSALKTLSLSG 117
Cdd:COG4886 113 TNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 118 NQLGALPPQLCSLRHLDVVDLSKNQIRSIPDTVGELQAIE-LNLNQNQISQISVrISCCPRLKVLRLEENclELSMLPQS 196
Cdd:COG4886 192 NQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLEtLDLSNNQLTDLPE-LGNLTNLEELDLSNN--QLTDLPPL 268
|
170 180
....*....|....*....|....*....
gi 59891431 197 iLSDSQICLLAVEGNLFEIKKLRELEGYD 225
Cdd:COG4886 269 -ANLTNLKTLDLSNNQLTDLKLKELELLL 296
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
21-221 |
1.10e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 106.56 E-value: 1.10e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 21 LKDRGLTEFPSELQKLTsNLRTIDLSNNKIDSLPPlIIGKFTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNHLREL 100
Cdd:COG4886 143 LSNNQLTDLPEPLGNLT-NLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDL 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 101 PSSFGQLSALKTLSLSGNQLGALPpQLCSLRHLDVVDLSKNQIRSIPDTVGELQAIELNLNQNQISQISVRISCCPRLKV 180
Cdd:COG4886 221 PEPLANLTNLETLDLSNNQLTDLP-ELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLN 299
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 59891431 181 LRLEENCLELSMLPQSILSDSQICLLAVEGNLFEIKKLREL 221
Cdd:COG4886 300 SLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTL 340
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
21-211 |
2.03e-16 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 77.81 E-value: 2.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 21 LKDRGLTEFPSELQKltsNLRTIDLSNNKIDSLPPLIIGKftlLKSLSLNNNKLTVLPDELCNlkKLETLSLNNNHLREL 100
Cdd:PRK15370 185 LKILGLTTIPACIPE---QITTLILDNNELKSLPENLQGN---IKTLYANSNQLTSIPATLPD--TIQEMELSINRITEL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 101 PSSFGqlSALKTLSLSGNQLGALPPQLC-SLRHLDVVDlskNQIRSIPDTVGElQAIELNLNQNQISQISVRISccPRLK 179
Cdd:PRK15370 257 PERLP--SALQSLDLFHNKISCLPENLPeELRYLSVYD---NSIRTLPAHLPS-GITHLNVQSNSLTALPETLP--PGLK 328
|
170 180 190
....*....|....*....|....*....|..
gi 59891431 180 VLRLEENCleLSMLPQSILSDSQIclLAVEGN 211
Cdd:PRK15370 329 TLEAGENA--LTSLPASLPPELQV--LDVSKN 356
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
38-188 |
3.66e-15 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 74.11 E-value: 3.66e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 38 SNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNLKKLETLSLNNNHLR-ELPSSFGQLSALKTLSL 115
Cdd:PLN00113 140 PNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLTSLEFLTLASNQLVgQIPRELGQMKSLKWIYL 219
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 59891431 116 SGNQL-GALPPQ---LCSLRHLDVVdlSKNQIRSIPDTVGELQAIE-LNLNQNQIS-QISVRISCCPRLKVLRLEENCL 188
Cdd:PLN00113 220 GYNNLsGEIPYEiggLTSLNHLDLV--YNNLTGPIPSSLGNLKNLQyLFLYQNKLSgPIPPSIFSLQKLISLDLSDNSL 296
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
37-156 |
2.69e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 71.80 E-value: 2.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 37 TSNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNLKKLETLSLNNNHLR-ELPSSFGQLSALKTLS 114
Cdd:PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSgEIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLD 553
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 59891431 115 LSGNQL-GALPPQLCSLRHLDVVDLSKNQIR-SIPDTvGELQAI 156
Cdd:PLN00113 554 LSQNQLsGEIPKNLGNVESLVQVNISHNHLHgSLPST-GAFLAI 596
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
21-188 |
3.18e-13 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 66.35 E-value: 3.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 21 LKDRGLTEFpsELQKLTSNLRTIDLSNNKIDSLPPLiiGKFTLLKSLSLNNNKLTVLpDELCNLKKLETLSLNNNHLREL 100
Cdd:cd21340 9 LNDKNITKI--DNLSLCKNLKVLYLYDNKITKIENL--EFLTNLTHLYLQNNQIEKI-ENLENLVNLKKLYLGGNRISVV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 101 pSSFGQLSALKTLSLSGNQLgALPPQLC-----------SLRHLDVvdlSKNQIRSIPDtVGELQAIE-LNLNQNQIS-- 166
Cdd:cd21340 84 -EGLENLTNLEELHIENQRL-PPGEKLTfdprslaalsnSLRVLNI---SGNNIDSLEP-LAPLRNLEqLDASNNQISdl 157
|
170 180
....*....|....*....|...
gi 59891431 167 -QISVRISCCPRLKVLRLEENCL 188
Cdd:cd21340 158 eELLDLLSSWPSLRELDLTGNPV 180
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
18-197 |
1.51e-12 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 66.64 E-value: 1.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 18 VFQLKDRGLTEFPselQKLTSNLRTIDLSNNKIDSLPPLIIGKftlLKSLSLNNNKLTVLPDELCNlkKLETLSLNNNHL 97
Cdd:PRK15370 245 EMELSINRITELP---ERLPSALQSLDLFHNKISCLPENLPEE---LRYLSVYDNSIRTLPAHLPS--GITHLNVQSNSL 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 98 RELPSSFGQlsALKTLSLSGNQLGALPPQLCSlrHLDVVDLSKNQIRSIPDTV-GELQaiELNLNQNQISQISVRISCCp 176
Cdd:PRK15370 317 TALPETLPP--GLKTLEAGENALTSLPASLPP--ELQVLDVSKNQITVLPETLpPTIT--TLDVSRNALTNLPENLPAA- 389
|
170 180
....*....|....*....|.
gi 59891431 177 rLKVLRLEENclELSMLPQSI 197
Cdd:PRK15370 390 -LQIMQASRN--NLVRLPESL 407
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
6-221 |
4.32e-10 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 59.41 E-value: 4.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 6 LRAHVETaqktgvFQLKDRGLTEFPSelqkLTSNLRTIDLSNNKIDSLPPLIIGkftlLKSLSLNNNKLT---VLPDELC 82
Cdd:PRK15387 220 LPAHITT------LVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPVLPPG----LLELSIFSNPLThlpALPSGLC 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 83 NL--------------KKLETLSLNNNHLRELPSSFGQL-----------------SALKTLSLSGNQLGALPP------ 125
Cdd:PRK15387 286 KLwifgnqltslpvlpPGLQELSVSDNQLASLPALPSELcklwaynnqltslptlpSGLQELSVSDNQLASLPTlpsely 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 126 -------QLCSL----RHLDVVDLSKNQIRSIPDTVGELQaiELNLNQNQISQISVRISCCPRLKVLRleencLELSMLP 194
Cdd:PRK15387 366 klwaynnRLTSLpalpSGLKELIVSGNRLTSLPVLPSELK--ELMVSGNRLTSLPMLPSGLLSLSVYR-----NQLTRLP 438
|
250 260
....*....|....*....|....*..
gi 59891431 195 QSILSDSQICLLAVEGNLFEIKKLREL 221
Cdd:PRK15387 439 ESLIHLSSETTVNLEGNPLSERTLQAL 465
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
26-166 |
1.34e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.64 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 26 LTEFPSELQKLTsNLRTIDLSNNKIDSLPPLiiGKFTLLKSLSLNNNKLTVLPdELCNLKKLETLSLNNNHLRELPSSFG 105
Cdd:COG4886 217 LTDLPEPLANLT-NLETLDLSNNQLTDLPEL--GNLTNLEELDLSNNQLTDLP-PLANLTNLKTLDLSNNQLTDLKLKEL 292
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 59891431 106 QLSALKTLSLSGNQLGALPPQLCSLRHLDVVDLSKNQIRSIPDTVGELQAIELNLNQNQIS 166
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
33-197 |
5.07e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 55.71 E-value: 5.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 33 LQKLTSNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNHLRELPSSFGQLSALKT 112
Cdd:COG4886 21 LTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 113 LS-----------------LSGNQLGALPPQLCSLRHLDVVDLSKNQIRSIPDTVGELQAIE-LNLNQNQISQISVRISC 174
Cdd:COG4886 101 LDlsgneelsnltnlesldLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKsLDLSNNQLTDLPEELGN 180
|
170 180
....*....|....*....|...
gi 59891431 175 CPRLKVLRLEENclELSMLPQSI 197
Cdd:COG4886 181 LTNLKELDLSNN--QITDLPEPL 201
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
4-131 |
1.32e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 54.70 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 4 SALRAHVetaqKTGVFQL--KDRGLTEFPselQKLTSNLRTIDLSNNKIDSLPPLIIGKftlLKSLSLNNNKLTVLPDEL 81
Cdd:PRK15370 296 RTLPAHL----PSGITHLnvQSNSLTALP---ETLPPGLKTLEAGENALTSLPASLPPE---LQVLDVSKNQITVLPETL 365
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 59891431 82 CnlKKLETLSLNNNHLRELPSSFGqlSALKTLSLSGNQLGALPPQLCSLR 131
Cdd:PRK15370 366 P--PTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLPESLPHFR 411
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
38-97 |
1.93e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.45 E-value: 1.93e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 59891431 38 SNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLTVL-PDELCNLKKLETLSLNNNHL 97
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
33-166 |
5.16e-08 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 52.93 E-value: 5.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 33 LQKLTSnlrtIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNLKKLETLSLNNNHLR-ELPSSFGQLSAL 110
Cdd:PLN00113 283 LQKLIS----LDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTgKIPVALTSLPRLQVLQLWSNKFSgEIPKNLGKHNNL 358
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 59891431 111 KTLSLSGNQL-GALPPQLCSLRHLDVVDLSKNQIRS-IPDTVGELQAIE-LNLNQNQIS 166
Cdd:PLN00113 359 TVLDLSTNNLtGEIPEGLCSSGNLFKLILFSNSLEGeIPKSLGACRSLRrVRLQDNSFS 417
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
21-105 |
7.10e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 52.51 E-value: 7.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 21 LKDRGLTEF-PSELQKLtSNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNLKKLETLSLNNNHLR 98
Cdd:PLN03150 425 LDNQGLRGFiPNDISKL-RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLS 503
|
....*...
gi 59891431 99 -ELPSSFG 105
Cdd:PLN03150 504 gRVPAALG 511
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
64-120 |
9.71e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 9.71e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 59891431 64 LKSLSLNNNKLTVLPDE-LCNLKKLETLSLNNNHLREL-PSSFGQLSALKTLSLSGNQL 120
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
18-188 |
1.51e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 51.77 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 18 VFQLKDRGLT-EFPSELQKlTSNLRTIDLSNNKIDS-LPPLIIGKFTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNN 95
Cdd:PLN00113 336 VLQLWSNKFSgEIPKNLGK-HNNLTVLDLSTNNLTGeIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 96 HLR-ELPSSFGQL------------------------SALKTLSLSGNQLGALPPQLCSLRHLDVVDLSKNQIR-SIPDT 149
Cdd:PLN00113 415 SFSgELPSEFTKLplvyfldisnnnlqgrinsrkwdmPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSgAVPRK 494
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 59891431 150 VGELQAI-ELNLNQNQIS-QISVRISCCPRLKVLRLEENCL 188
Cdd:PLN00113 495 LGSLSELmQLKLSENKLSgEIPDELSSCKKLVSLDLSHNQL 535
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
23-191 |
2.96e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 50.05 E-value: 2.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 23 DRGLTEFPSELQKlTSNLRTIDLSNNKI--DSLPPLI-IGKFTLLKSLSLNNNKL---------TVLPDELCNLKK--LE 88
Cdd:cd00116 67 PRGLQSLLQGLTK-GCGLQELDLSDNALgpDGCGVLEsLLRSSSLQELKLNNNGLgdrglrllaKGLKDLPPALEKlvLG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 89 TLSLNNNHLRELPSSFGQLSALKTLSLSGNQLG-----ALPPQLCSLRHLDVVDLSKNQIRS-----IPDTVGELQAIE- 157
Cdd:cd00116 146 RNRLEGASCEALAKALRANRDLKELNLANNGIGdagirALAEGLKANCNLEVLDLNNNGLTDegasaLAETLASLKSLEv 225
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 59891431 158 LNLNQNQISQISVR------ISCCPRLKVLRLEENCLELS 191
Cdd:cd00116 226 LNLGDNNLTDAGAAalasalLSPNISLLTLSLSCNDITDD 265
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
43-127 |
7.20e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 49.43 E-value: 7.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 43 IDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNLKKLETLSLNNNHLR-ELPSSFGQLSALKTLSLSGNQL 120
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRgNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSL 502
|
....*...
gi 59891431 121 -GALPPQL 127
Cdd:PLN03150 503 sGRVPAAL 510
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
23-166 |
7.25e-07 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 49.40 E-value: 7.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 23 DRGLTEFPSELQKLTSnLRTIDLSNNKIDSLPPLIIGKF----TLLKSLSLNNNKLTV-----LPDELCNLKKLETLSLN 93
Cdd:COG5238 222 DEGAEILAEALKGNKS-LTTLDLSNNQIGDEGVIALAEAlknnTTVETLYLSGNQIGAegaiaLAKALQGNTTLTSLDLS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 94 NNHLRE-----LPSSFGQLSALKTLSLSGNQLG-----ALPPQLCSLRHLDVVDLSKNQIRS------IPDTVGELQAIE 157
Cdd:COG5238 301 VNRIGDegaiaLAEGLQGNKTLHTLNLAYNGIGaqgaiALAKALQENTTLHSLDLSDNQIGDegaialAKYLEGNTTLRE 380
|
....*....
gi 59891431 158 LNLNQNQIS 166
Cdd:COG5238 381 LNLGKNNIG 389
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
37-188 |
2.14e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 48.31 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 37 TSNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNL-KKLETLSLNNNHLRElPSSFGQLSALKTLS 114
Cdd:PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSgPIPDDIFTTsSSLRYLNLSNNNFTG-SIPRGSIPNLETLD 146
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 59891431 115 LSGNQL-GALPPQLCSLRHLDVVDLSKNQIRS-IPDTVGELQAIE-LNLNQNQ-ISQISVRISCCPRLKVLRLEENCL 188
Cdd:PLN00113 147 LSNNMLsGEIPNDIGSFSSLKVLDLGGNVLVGkIPNSLTNLTSLEfLTLASNQlVGQIPRELGQMKSLKWIYLGYNNL 224
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
86-143 |
9.72e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 9.72e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 86 KLETLSLNNNHLREL-PSSFGQLSALKTLSLSGNQLGALPPQ-LCSLRHLDVVDLSKNQI 143
Cdd:pfam13855 2 NLRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
20-170 |
1.04e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 45.94 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 20 QLKDRGLTEFPSELQKLTsNLRTIDLSNNKIDSLPPLIIGK----FTLLKSLSLNNNKLT-----VLPDELCNLKKLETL 90
Cdd:COG5238 191 QIGDEGIEELAEALTQNT-TVTTLWLKRNPIGDEGAEILAEalkgNKSLTTLDLSNNQIGdegviALAEALKNNTTVETL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 91 SLNNNHLRE-----LPSSFGQLSALKTLSLSGNQLG-----ALPPQLCSLRHLDVVDLSKNQI-----RSIPDTVGELQA 155
Cdd:COG5238 270 YLSGNQIGAegaiaLAKALQGNTTLTSLDLSVNRIGdegaiALAEGLQGNKTLHTLNLAYNGIgaqgaIALAKALQENTT 349
|
170
....*....|....*.
gi 59891431 156 IE-LNLNQNQISQISV 170
Cdd:COG5238 350 LHsLDLSDNQIGDEGA 365
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
31-137 |
5.33e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 40.92 E-value: 5.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 31 SELQKLTSNLRTIDLSNNKIDSLPPLIIGkftlLKSLSLNNNKLTVLPDELCNLKKLETLSLNNN--------HLRELPS 102
Cdd:PRK15387 395 TSLPVLPSELKELMVSGNRLTSLPMLPSG----LLSLSVYRNQLTRLPESLIHLSSETTVNLEGNplsertlqALREITS 470
|
90 100 110
....*....|....*....|....*....|....*
gi 59891431 103 SFGQLSALKTLSLSgnqlGALPPQLCSLRHLDVVD 137
Cdd:PRK15387 471 APGYSGPIIRFDMA----GASAPRETRALHLAAAD 501
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
28-120 |
1.06e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 39.83 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 28 EFPSELQKlTSNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLT-VLPDELCNLKKLETLSLNNNHLR-ELPSSfG 105
Cdd:PLN00113 514 EIPDELSS-CKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQVNISHNHLHgSLPST-G 591
|
90
....*....|....*
gi 59891431 106 QLSALKTLSLSGNQL 120
Cdd:PLN00113 592 AFLAINASAVAGNID 606
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
84-222 |
1.12e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 39.00 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 59891431 84 LKKLETLSLNNNHLRELPsSFGQLSALKTLSLSGNQLGALpPQLCSLRHLDVVDLSKNQIRSIPDTVGELQAIELNLNQN 163
Cdd:cd21340 1 LKRITHLYLNDKNITKID-NLSLCKNLKVLYLYDNKITKI-ENLEFLTNLTHLYLQNNQIEKIENLENLVNLKKLYLGGN 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 59891431 164 QISQISvRISCCPRLKVLRLEENCLELSML----PQSILSDSQ-ICLLAVEGN----LFEIKKLRELE 222
Cdd:cd21340 79 RISVVE-GLENLTNLEELHIENQRLPPGEKltfdPRSLAALSNsLRVLNISGNnidsLEPLAPLRNLE 145
|
|
|