|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
792-1019 |
1.74e-65 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 222.53 E-value: 1.74e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 792 SKYFSRGIMMAILVNTLSMGVEYHEQPEE-LTNALEISNIVFTSMFALEMLLKLLACGP-LGYIRNPYNIFDGIIVVISV 869
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 870 WEIV---GQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFIFSILGMHLFGCKFSlktD 946
Cdd:pfam00520 81 ISLVlssVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLK---T 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 53832011 947 TGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSS-WAALYFVALMTFGNYVLFNLLVAILVEGFQ 1019
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGEfWAYIYFVSFIILGGFLLLNLFIAVIIDNFQ 231
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1293-1565 |
6.41e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 6.41e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1293 HKMFDHVVLVFIFLNCVTIALERPDIDPGSTERvFLSVSNYIFTAIFVAEMMVKVVALGLLsgeHAYLQSSWNLLDGLLV 1372
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLTT-VLEILDYVFTGIFTLEMLLKIIAAGFK---KRYFRSPWNILDFVVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1373 LVSLVDIVVAMASAGGA-------------KIlgvlrvlrllrtlrplrvISRAPGLKLVVETLISSLRPIGNIVLICCA 1439
Cdd:pfam00520 77 LPSLISLVLSSVGSLSGlrvlrllrllrllRL------------------IRRLEGLRTLVNSLIRSLKSLGNLLLLLLL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1440 FFIIFGILGVQLFKGKFYYCEGPDTRNistkaqcraahyrwvrrkYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGv 1519
Cdd:pfam00520 139 FLFIFAIIGYQLFGGKLKTWENPDNGR------------------TNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG- 199
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 53832011 1520 dqqpvqnhNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ 1565
Cdd:pfam00520 200 --------EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERT 237
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1610-1841 |
6.59e-52 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 183.62 E-value: 6.59e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1610 SHYLDLFITFIICVNVITMSMEHYNQPKS-LDEALKYCNYVFTIVFVFEAALKLVAFGF-RRFFKDRWNQLDLAIVLLSL 1687
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1688 MGITLEEIEmsaalpiNPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGR 1767
Cdd:pfam00520 81 ISLVLSSVG-------SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGG 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 53832011 1768 LECSEDNPCEGlsrHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECSredkhclsylPALSPVYFVTFVLVA 1841
Cdd:pfam00520 154 KLKTWENPDNG---RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----------EFWAYIYFVSFIILG 214
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
99-430 |
8.82e-45 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 163.21 E-value: 8.82e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 99 NPWFEHVSMLVIMLNCVTLGMFRPCEDVECgseRCNILEAFDAFIFAFFAVEMVIKMVALGLFgqKCYLGDTWNRLDFFI 178
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEP---LTTVLEILDYVFTGIFTLEMLLKIIAAGFK--KRYFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 179 VVAGMMEYSLDGHN--VSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFfvffifgivgvqlwagll 256
Cdd:pfam00520 76 VLPSLISLVLSSVGslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLL------------------ 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 257 rnrCFLdsafvrnnnltflrpyyqteegeenpFICSSrrdNGMQkcshipgrreLRMPCTLGWEaytqpqaegvgaarna 336
Cdd:pfam00520 138 ---LFL--------------------------FIFAI---IGYQ----------LFGGKLKTWE---------------- 159
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 337 cinwnqyynvcrsgdsNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDA-HSFYNFIYFILLIIVGSFFMINLCL 415
Cdd:pfam00520 160 ----------------NPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGkGEFWAYIYFVSFIILGGFLLLNLFI 223
|
330
....*....|....*
gi 53832011 416 VVIATQFSETKQRES 430
Cdd:pfam00520 224 AVIIDNFQELTERTE 238
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
1879-2346 |
4.33e-11 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 69.20 E-value: 4.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1879 AQGPGSARRVDADRPP---------LPQESPGARDAPNLVARKVSVSRMLSlpNDSYMFRPVVPASAPHPRPLQEVEMET 1949
Cdd:PHA03247 2495 APDPGGGGPPDPDAPPapsrlapaiLPDEPVGEPVHPRMLTWIRGLEELAS--DDAGDPPPPLPPAAPPAAPDRSVPPPR 2572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1950 YG---AGTPLGSVASVHSPPAEScASLQIPLAVSSPARSGEPLHALSPRGTARSPSLSRLLCRQEAVHTDSLEGKIDSPR 2026
Cdd:PHA03247 2573 PAprpSEPAVTSRARRPDAPPQS-ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2027 DTLDPAEPGEKTPVRPVTQGGSLQ--SPPRSPRPASVRTrkhTFGQRCVSSRPAAPGGEEAEASDPADEEV--------S 2096
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQasSPPQRPRRRAARP---TVGSLTSLADPPPPPPTPEPAPHALVSATplppgpaaA 2728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2097 HITSSACPWQPtAEPHGPEASPVAGGERDLRRLYSVDAqgfldkPGRADEQWRPSAELGSGEPGEAKAWGPEAEPALGAR 2176
Cdd:PHA03247 2729 RQASPALPAAP-APPAVPAGPATPGGPARPARPPTTAG------PPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSP 2801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2177 RKKkmSPPCISVEPPAEDE-GSARPSAAEGGSTTLRRRTPSCEATPHRDSLePTEGSGAGGDPAAKGERWGQASC----- 2250
Cdd:PHA03247 2802 WDP--ADPPAAVLAPAAALpPAASPAGPLPPPTSAQPTAPPPPPGPPPPSL-PLGGSVAPGGDVRRRPPSRSPAAkpaap 2878
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2251 ---RAEHLTVPSFAFEPLDLGVPSGDPfldgSHSVTPESRASSsgaivplEPPESEPPMPVGDPPEKRRGLyltvPQCPL 2327
Cdd:PHA03247 2879 arpPVRRLARPAVSRSTESFALPPDQP----ERPPQPQAPPPP-------QPQPQPPPPPQPQPPPPPPPR----PQPPL 2943
|
490
....*....|....*....
gi 53832011 2328 EKPGSPSATPAPGGGADDP 2346
Cdd:PHA03247 2944 APTTDPAGAGEPSGAVPQP 2962
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
792-1019 |
1.74e-65 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 222.53 E-value: 1.74e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 792 SKYFSRGIMMAILVNTLSMGVEYHEQPEE-LTNALEISNIVFTSMFALEMLLKLLACGP-LGYIRNPYNIFDGIIVVISV 869
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 870 WEIV---GQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFIFSILGMHLFGCKFSlktD 946
Cdd:pfam00520 81 ISLVlssVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLK---T 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 53832011 947 TGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSS-WAALYFVALMTFGNYVLFNLLVAILVEGFQ 1019
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGEfWAYIYFVSFIILGGFLLLNLFIAVIIDNFQ 231
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1293-1565 |
6.41e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 6.41e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1293 HKMFDHVVLVFIFLNCVTIALERPDIDPGSTERvFLSVSNYIFTAIFVAEMMVKVVALGLLsgeHAYLQSSWNLLDGLLV 1372
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLTT-VLEILDYVFTGIFTLEMLLKIIAAGFK---KRYFRSPWNILDFVVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1373 LVSLVDIVVAMASAGGA-------------KIlgvlrvlrllrtlrplrvISRAPGLKLVVETLISSLRPIGNIVLICCA 1439
Cdd:pfam00520 77 LPSLISLVLSSVGSLSGlrvlrllrllrllRL------------------IRRLEGLRTLVNSLIRSLKSLGNLLLLLLL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1440 FFIIFGILGVQLFKGKFYYCEGPDTRNistkaqcraahyrwvrrkYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGv 1519
Cdd:pfam00520 139 FLFIFAIIGYQLFGGKLKTWENPDNGR------------------TNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG- 199
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 53832011 1520 dqqpvqnhNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ 1565
Cdd:pfam00520 200 --------EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERT 237
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1610-1841 |
6.59e-52 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 183.62 E-value: 6.59e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1610 SHYLDLFITFIICVNVITMSMEHYNQPKS-LDEALKYCNYVFTIVFVFEAALKLVAFGF-RRFFKDRWNQLDLAIVLLSL 1687
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1688 MGITLEEIEmsaalpiNPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGR 1767
Cdd:pfam00520 81 ISLVLSSVG-------SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGG 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 53832011 1768 LECSEDNPCEGlsrHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECSredkhclsylPALSPVYFVTFVLVA 1841
Cdd:pfam00520 154 KLKTWENPDNG---RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----------EFWAYIYFVSFIILG 214
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
99-430 |
8.82e-45 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 163.21 E-value: 8.82e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 99 NPWFEHVSMLVIMLNCVTLGMFRPCEDVECgseRCNILEAFDAFIFAFFAVEMVIKMVALGLFgqKCYLGDTWNRLDFFI 178
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEP---LTTVLEILDYVFTGIFTLEMLLKIIAAGFK--KRYFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 179 VVAGMMEYSLDGHN--VSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFfvffifgivgvqlwagll 256
Cdd:pfam00520 76 VLPSLISLVLSSVGslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLL------------------ 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 257 rnrCFLdsafvrnnnltflrpyyqteegeenpFICSSrrdNGMQkcshipgrreLRMPCTLGWEaytqpqaegvgaarna 336
Cdd:pfam00520 138 ---LFL--------------------------FIFAI---IGYQ----------LFGGKLKTWE---------------- 159
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 337 cinwnqyynvcrsgdsNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDA-HSFYNFIYFILLIIVGSFFMINLCL 415
Cdd:pfam00520 160 ----------------NPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGkGEFWAYIYFVSFIILGGFLLLNLFI 223
|
330
....*....|....*
gi 53832011 416 VVIATQFSETKQRES 430
Cdd:pfam00520 224 AVIIDNFQELTERTE 238
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1879-2346 |
4.33e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 69.20 E-value: 4.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1879 AQGPGSARRVDADRPP---------LPQESPGARDAPNLVARKVSVSRMLSlpNDSYMFRPVVPASAPHPRPLQEVEMET 1949
Cdd:PHA03247 2495 APDPGGGGPPDPDAPPapsrlapaiLPDEPVGEPVHPRMLTWIRGLEELAS--DDAGDPPPPLPPAAPPAAPDRSVPPPR 2572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1950 YG---AGTPLGSVASVHSPPAEScASLQIPLAVSSPARSGEPLHALSPRGTARSPSLSRLLCRQEAVHTDSLEGKIDSPR 2026
Cdd:PHA03247 2573 PAprpSEPAVTSRARRPDAPPQS-ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2027 DTLDPAEPGEKTPVRPVTQGGSLQ--SPPRSPRPASVRTrkhTFGQRCVSSRPAAPGGEEAEASDPADEEV--------S 2096
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQasSPPQRPRRRAARP---TVGSLTSLADPPPPPPTPEPAPHALVSATplppgpaaA 2728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2097 HITSSACPWQPtAEPHGPEASPVAGGERDLRRLYSVDAqgfldkPGRADEQWRPSAELGSGEPGEAKAWGPEAEPALGAR 2176
Cdd:PHA03247 2729 RQASPALPAAP-APPAVPAGPATPGGPARPARPPTTAG------PPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSP 2801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2177 RKKkmSPPCISVEPPAEDE-GSARPSAAEGGSTTLRRRTPSCEATPHRDSLePTEGSGAGGDPAAKGERWGQASC----- 2250
Cdd:PHA03247 2802 WDP--ADPPAAVLAPAAALpPAASPAGPLPPPTSAQPTAPPPPPGPPPPSL-PLGGSVAPGGDVRRRPPSRSPAAkpaap 2878
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2251 ---RAEHLTVPSFAFEPLDLGVPSGDPfldgSHSVTPESRASSsgaivplEPPESEPPMPVGDPPEKRRGLyltvPQCPL 2327
Cdd:PHA03247 2879 arpPVRRLARPAVSRSTESFALPPDQP----ERPPQPQAPPPP-------QPQPQPPPPPQPQPPPPPPPR----PQPPL 2943
|
490
....*....|....*....
gi 53832011 2328 EKPGSPSATPAPGGGADDP 2346
Cdd:PHA03247 2944 APTTDPAGAGEPSGAVPQP 2962
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2024-2180 |
6.86e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.37 E-value: 6.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2024 SPRDtlDPA----EPGEKTPVRPVTQGGSLQSPPRSPRPASVrtrkhtfgqrcvsSRPAAPGGEEAEASDPADEEVSHIT 2099
Cdd:NF040712 178 TALD--DEArwliDPDFGRPLRPLATVPRLAREPADARPEEV-------------EPAPAAEGAPATDSDPAEAGTPDDL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2100 SSA-----CPWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQW-RPSAELGSGEPGEAKAWGPEAEPAL 2173
Cdd:NF040712 243 ASArrrraGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAAETPEAAEPPApAPAAPAAPAAPEAEEPARPEPPPAP 322
|
....*..
gi 53832011 2174 GARRKKK 2180
Cdd:NF040712 323 KPKRRRR 329
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
792-1019 |
1.74e-65 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 222.53 E-value: 1.74e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 792 SKYFSRGIMMAILVNTLSMGVEYHEQPEE-LTNALEISNIVFTSMFALEMLLKLLACGP-LGYIRNPYNIFDGIIVVISV 869
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 870 WEIV---GQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFIFSILGMHLFGCKFSlktD 946
Cdd:pfam00520 81 ISLVlssVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLK---T 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 53832011 947 TGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSS-WAALYFVALMTFGNYVLFNLLVAILVEGFQ 1019
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGEfWAYIYFVSFIILGGFLLLNLFIAVIIDNFQ 231
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1293-1565 |
6.41e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 6.41e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1293 HKMFDHVVLVFIFLNCVTIALERPDIDPGSTERvFLSVSNYIFTAIFVAEMMVKVVALGLLsgeHAYLQSSWNLLDGLLV 1372
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLTT-VLEILDYVFTGIFTLEMLLKIIAAGFK---KRYFRSPWNILDFVVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1373 LVSLVDIVVAMASAGGA-------------KIlgvlrvlrllrtlrplrvISRAPGLKLVVETLISSLRPIGNIVLICCA 1439
Cdd:pfam00520 77 LPSLISLVLSSVGSLSGlrvlrllrllrllRL------------------IRRLEGLRTLVNSLIRSLKSLGNLLLLLLL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1440 FFIIFGILGVQLFKGKFYYCEGPDTRNistkaqcraahyrwvrrkYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGv 1519
Cdd:pfam00520 139 FLFIFAIIGYQLFGGKLKTWENPDNGR------------------TNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG- 199
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 53832011 1520 dqqpvqnhNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ 1565
Cdd:pfam00520 200 --------EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERT 237
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1610-1841 |
6.59e-52 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 183.62 E-value: 6.59e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1610 SHYLDLFITFIICVNVITMSMEHYNQPKS-LDEALKYCNYVFTIVFVFEAALKLVAFGF-RRFFKDRWNQLDLAIVLLSL 1687
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1688 MGITLEEIEmsaalpiNPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGR 1767
Cdd:pfam00520 81 ISLVLSSVG-------SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGG 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 53832011 1768 LECSEDNPCEGlsrHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECSredkhclsylPALSPVYFVTFVLVA 1841
Cdd:pfam00520 154 KLKTWENPDNG---RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----------EFWAYIYFVSFIILG 214
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
99-430 |
8.82e-45 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 163.21 E-value: 8.82e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 99 NPWFEHVSMLVIMLNCVTLGMFRPCEDVECgseRCNILEAFDAFIFAFFAVEMVIKMVALGLFgqKCYLGDTWNRLDFFI 178
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEP---LTTVLEILDYVFTGIFTLEMLLKIIAAGFK--KRYFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 179 VVAGMMEYSLDGHN--VSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFfvffifgivgvqlwagll 256
Cdd:pfam00520 76 VLPSLISLVLSSVGslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLL------------------ 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 257 rnrCFLdsafvrnnnltflrpyyqteegeenpFICSSrrdNGMQkcshipgrreLRMPCTLGWEaytqpqaegvgaarna 336
Cdd:pfam00520 138 ---LFL--------------------------FIFAI---IGYQ----------LFGGKLKTWE---------------- 159
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 337 cinwnqyynvcrsgdsNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDA-HSFYNFIYFILLIIVGSFFMINLCL 415
Cdd:pfam00520 160 ----------------NPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGkGEFWAYIYFVSFIILGGFLLLNLFI 223
|
330
....*....|....*
gi 53832011 416 VVIATQFSETKQRES 430
Cdd:pfam00520 224 AVIIDNFQELTERTE 238
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1879-2346 |
4.33e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 69.20 E-value: 4.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1879 AQGPGSARRVDADRPP---------LPQESPGARDAPNLVARKVSVSRMLSlpNDSYMFRPVVPASAPHPRPLQEVEMET 1949
Cdd:PHA03247 2495 APDPGGGGPPDPDAPPapsrlapaiLPDEPVGEPVHPRMLTWIRGLEELAS--DDAGDPPPPLPPAAPPAAPDRSVPPPR 2572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1950 YG---AGTPLGSVASVHSPPAEScASLQIPLAVSSPARSGEPLHALSPRGTARSPSLSRLLCRQEAVHTDSLEGKIDSPR 2026
Cdd:PHA03247 2573 PAprpSEPAVTSRARRPDAPPQS-ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2027 DTLDPAEPGEKTPVRPVTQGGSLQ--SPPRSPRPASVRTrkhTFGQRCVSSRPAAPGGEEAEASDPADEEV--------S 2096
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQasSPPQRPRRRAARP---TVGSLTSLADPPPPPPTPEPAPHALVSATplppgpaaA 2728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2097 HITSSACPWQPtAEPHGPEASPVAGGERDLRRLYSVDAqgfldkPGRADEQWRPSAELGSGEPGEAKAWGPEAEPALGAR 2176
Cdd:PHA03247 2729 RQASPALPAAP-APPAVPAGPATPGGPARPARPPTTAG------PPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSP 2801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2177 RKKkmSPPCISVEPPAEDE-GSARPSAAEGGSTTLRRRTPSCEATPHRDSLePTEGSGAGGDPAAKGERWGQASC----- 2250
Cdd:PHA03247 2802 WDP--ADPPAAVLAPAAALpPAASPAGPLPPPTSAQPTAPPPPPGPPPPSL-PLGGSVAPGGDVRRRPPSRSPAAkpaap 2878
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2251 ---RAEHLTVPSFAFEPLDLGVPSGDPfldgSHSVTPESRASSsgaivplEPPESEPPMPVGDPPEKRRGLyltvPQCPL 2327
Cdd:PHA03247 2879 arpPVRRLARPAVSRSTESFALPPDQP----ERPPQPQAPPPP-------QPQPQPPPPPQPQPPPPPPPR----PQPPL 2943
|
490
....*....|....*....
gi 53832011 2328 EKPGSPSATPAPGGGADDP 2346
Cdd:PHA03247 2944 APTTDPAGAGEPSGAVPQP 2962
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1877-2274 |
2.26e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 63.27 E-value: 2.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1877 EMAQGPGSARRVDADRPPLPQESPGARDAPNLVARKVSVSRMLSLPNDSYMFRPVVPASAPHPRPLQEVEMETYGAGtPL 1956
Cdd:PHA03307 49 ELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPAS-PP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1957 GSVASVHSPPAESCASLQIPLAVSSPArSGEPlHALSPRGTARSPSLSRLLCR-QEAVHTdslegkIDSPRDTLDPAEPG 2035
Cdd:PHA03307 128 PSPAPDLSEMLRPVGSPGPPPAASPPA-AGAS-PAAVASDAASSRQAALPLSSpEETARA------PSSPPAEPPPSTPP 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2036 EKTPVRPVTQGGSLQSPPRSPRPASVRTRKHTFGQRCVSSRPAAPG----GEEAEASDPADEEVSHITS--SACPWQPTA 2109
Cdd:PHA03307 200 AAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSgcgwGPENECPLPRPAPITLPTRiwEASGWNGPS 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2110 EPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQWRPSAELG------SGEPGEAKAWGPEAEPALGARRKKKmSP 2183
Cdd:PHA03307 280 SRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSssstssSSESSRGAAVSPGPSPSRSPSPSRP-PP 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2184 PCISVEPPAEDEGSARPS--AAEGGSTTLRRRTPSC-EATPHRDSLEPTEGSGAGGDPAAKGERWGQASCRaehltvpsf 2260
Cdd:PHA03307 359 PADPSSPRKRPRPSRAPSspAASAGRPTRRRARAAVaGRARRRDATGRFPAGRPRPSPLDAGAASGAFYAR--------- 429
|
410
....*....|....
gi 53832011 2261 afEPldLGVPSGDP 2274
Cdd:PHA03307 430 --YP--LLTPSGEP 439
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1648-1840 |
6.15e-07 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 52.66 E-value: 6.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1648 YVFTIVFVFEAALKLVAFGfRRFFKDRWNQLDLAIVLLS----------------LMGITLEEIE--------------- 1696
Cdd:pfam08016 18 VVFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSvvlivlniyrdfladrLIKSVEASPVtfidfdrvaqldnly 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1697 -MSAALPINPTIIRIMRVLRIARVLKLLKmatgmrallDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGrlecsednp 1775
Cdd:pfam08016 97 rIILAFLVFLTWLKLFKVLRFNKTMSLFT---------KTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFG--------- 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 53832011 1776 ceglSRHATFSNFGMAFLTLFRVSTGD-NWNGImkdtlRECSRedkhclsylpALSPVYFVTFVLV 1840
Cdd:pfam08016 159 ----TQAPNFSNFVKSILTLFRTILGDfGYNEI-----FSGNR----------VLGPLLFLTFVFL 205
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1959-2345 |
8.80e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 54.79 E-value: 8.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1959 VASVHSPPAESCASLQIPLAVSSPARSGEPLHALSPRGTARSPSLSRLLCRQEAVHTDSLEGKIDSPRDTLDPAEPGEKT 2038
Cdd:PHA03307 51 AAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSP 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2039 PVRpvtqggsLQSPPRSPRPASVRTRKHTFGQRCVSSRPAAPGGEEAEASDPADEEVShitSSACPWQPTAEPhgPEASP 2118
Cdd:PHA03307 131 APD-------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEE---TARAPSSPPAEP--PPSTP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2119 VAGGERDLRRLYSVDAQGFLD---KPGRADEQWRP-SAELGSGEPGEAKAWGPEAE-----PALGARRKKKM-------- 2181
Cdd:PHA03307 199 PAAASPRPPRRSSPISASASSpapAPGRSAADDAGaSSSDSSSSESSGCGWGPENEcplprPAPITLPTRIWeasgwngp 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2182 ---SPPCISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHRDSLEPTEGSGAGGDPAAKGErwGQASCRAehltvp 2258
Cdd:PHA03307 279 ssrPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSP--GPSPSRS------ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2259 sfafepldlGVPSGDPfldGSHSVTPESRASSSGAIVPLEPPESeppmpvGDPPEKRRGLYLTVPQCPLEKPGS-PSATP 2337
Cdd:PHA03307 351 ---------PSPSRPP---PPADPSSPRKRPRPSRAPSSPAASA------GRPTRRRARAAVAGRARRRDATGRfPAGRP 412
|
....*...
gi 53832011 2338 APGGGADD 2345
Cdd:PHA03307 413 RPSPLDAG 420
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1886-2312 |
2.99e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 2.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1886 RRVDADRPPLPQESPGARDAPNLVARKVSVSRmlslPNDSymfrPVVPASAPHP----RPLQEVEmETYGAGTPLGSVAS 1961
Cdd:PHA03247 2669 RLGRAAQASSPPQRPRRRAARPTVGSLTSLAD----PPPP----PPTPEPAPHAlvsaTPLPPGP-AAARQASPALPAAP 2739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1962 VHSPPAESCASLQIPLAVSSPARSGEPLHALSPRGTARSPSlsRLLCRQEAVHTDSLEGKIDSPRDTLDP--AEPGEKTP 2039
Cdd:PHA03247 2740 APPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPP--RRLTRPAVASLSESRESLPSPWDPADPpaAVLAPAAA 2817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2040 VRPVTQGGSLQSPPRSPRPASVRTRKHTFGQRCVSSRPAAPGGEEAEASdpadeevshiTSSACPWQPTAEPHgPEASPV 2119
Cdd:PHA03247 2818 LPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRP----------PSRSPAAKPAAPAR-PPVRRL 2886
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2120 AggerdlRRLYSVDAQGFLDKPgraDEQWRPSAELGSGEPGEAKAWGPEAEPALGARRKKKMSPPcisVEPPAEDEGSAR 2199
Cdd:PHA03247 2887 A------RPAVSRSTESFALPP---DQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP---LAPTTDPAGAGE 2954
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2200 PSAAE-----GGSTTLRRRTPSCEATPHRDSLEPTEGSGAG--GDPAAKGERWgqASCRAEHL-TVPSFAFEPLDLGVPS 2271
Cdd:PHA03247 2955 PSGAVpqpwlGALVPGRVAVPRFRVPQPAPSREAPASSTPPltGHSLSRVSSW--ASSLALHEeTDPPPVSLKQTLWPPD 3032
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 53832011 2272 GDPFLDGSHSVTPESRASSSGAIVPLEPPESEPPMPVGDPP 2312
Cdd:PHA03247 3033 DTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPA 3073
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2028-2233 |
1.06e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 47.51 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2028 TLDPA--EPGEKTPVRPVTQGGSLQSPPRSP------RPASVRTRKHTFGQRCVSSRPAAPggEEAEASDPAdeevshit 2099
Cdd:PRK14086 87 TVDPSagEPAPPPPHARRTSEPELPRPGRRPyegyggPRADDRPPGLPRQDQLPTARPAYP--AYQQRPEPG-------- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2100 ssacPWQPTAEPHGPEASPVAGGERDlrrLYSVDAQgfldkPGRADEQWRPSAelGSGEPGEAKAWGPEAEPALGARRKK 2179
Cdd:PRK14086 157 ----AWPRAADDYGWQQQRLGFPPRA---PYASPAS-----YAPEQERDREPY--DAGRPEYDQRRRDYDHPRPDWDRPR 222
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 53832011 2180 KMSPPCISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHRDSlEPTEGSG 2233
Cdd:PRK14086 223 RDRTDRPEPPPGAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQP-APAPGPG 275
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1929-2347 |
1.30e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.29 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1929 RPVVPASAPHPRP-LQEVEMETYGAGTPLGSVASVHSPPAESCASLQIPLAVSSPARSGEPLHALSPR-GTARSPSlsrl 2006
Cdd:PRK07764 361 RMLLPSASDDERGlLARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAApQPAPAPA---- 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2007 lcrQEAVHTDSLEGKIDSPRDTLDPAEPGEKTPvRPVTQGGSLQSPPRSPRPASVRTRkhtfgqrcvSSRPAAPGGEEAE 2086
Cdd:PRK07764 437 ---PAPAPPSPAGNAPAGGAPSPPPAAAPSAQP-APAPAAAPEPTAAPAPAPPAAPAP---------AAAPAAPAAPAAP 503
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2087 ASDPADEEV------------SHITSSACPWQPTAEPHGPEaspvaGGERDLRRLYSVDAQGFLDkPGRAD--------- 2145
Cdd:PRK07764 504 AGADDAATLrerwpeilaavpKRSRKTWAILLPEATVLGVR-----GDTLVLGFSTGGLARRFAS-PGNAEvlvtalaee 577
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2146 --EQWRPSAELGsGEPGEAKAWGPEAePALGARRKKKMSPPciSVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHR 2223
Cdd:PRK07764 578 lgGDWQVEAVVG-PAPGAAGGEGPPA-PASSGPPEEAARPA--APAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHH 653
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2224 DSLEPTEGSGAGGDPAAKGERWGQASCRAehlTVPSFAFEPLDLGVPSGDPfLDGSHSVTPESRASSSGAIVPLEPPESE 2303
Cdd:PRK07764 654 PKHVAVPDASDGGDGWPAKAGGAAPAAPP---PAPAPAAPAAPAGAAPAQP-APAPAATPPAGQADDPAAQPPQAAQGAS 729
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 53832011 2304 PPMPVGD-----------PPEKRRGLYLTVPQCPLEKPGSPSATPAPGGGADDPV 2347
Cdd:PRK07764 730 APSPAADdpvplppepddPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEE 784
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2071-2265 |
6.17e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 6.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2071 RCVSSRPAAPGGEEAEASDPADEEVSHITSSACPWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLdKPGRADEQWRP 2150
Cdd:PRK12323 359 RMLAFRPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR-SPAPEALAAAR 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2151 SAELGSGEPGEAKAWGPEAEPALGARrkkkmsPPCISVEPPAEDEGSARPSAAEGGSttlrrRTPSCEATPHRDSLEPTE 2230
Cdd:PRK12323 438 QASARGPGGAPAPAPAPAAAPAAAAR------PAAAGPRPVAAAAAAAPARAAPAAA-----PAPADDDPPPWEELPPEF 506
|
170 180 190
....*....|....*....|....*....|....*
gi 53832011 2231 GSGAGGDPAAKGERWGQASCRAEHLTVPSFAFEPL 2265
Cdd:PRK12323 507 ASPAPAQPDAAPAGWVAESIPDPATADPDDAFETL 541
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1879-2227 |
6.56e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 6.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1879 AQGPGSARRVDADRPPlPQESPGARDAPNLVARKVSVSRMLSLPNDSYMFRPVVPASAPHPRPLQEVEMETYGAGTPLGS 1958
Cdd:PRK07764 409 APAPAAAAPAAAAAPA-PAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAA 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1959 VASVHSPPAESCASLQI-PLAVSSPARSGEPL-------------------HALSPRGTA-----RSPSLSRLLCRQEav 2013
Cdd:PRK07764 488 PAPAAAPAAPAAPAAPAgADDAATLRERWPEIlaavpkrsrktwaillpeaTVLGVRGDTlvlgfSTGGLARRFASPG-- 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2014 HTDSL--------------EGKIDSPRDTLDPAEPGEKTPVRPVTQGGSLQSPPRSPRPASVRTRK--HTFGQRCVSSRP 2077
Cdd:PRK07764 566 NAEVLvtalaeelggdwqvEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGaaAAPAEASAAPAP 645
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2078 AAPGGE---EAEASDPADEEVSHITSSACPWQPTAEPHGPEASPVAGGERDLRRlYSVDAQGFLDKPGRADEQW--RPSA 2152
Cdd:PRK07764 646 GVAAPEhhpKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA-QPAPAPAATPPAGQADDPAaqPPQA 724
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 53832011 2153 ELGSGEPGEAKAWG----PEAEPALGARRKKKMSPPCISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHRDSLE 2227
Cdd:PRK07764 725 AQGASAPSPAADDPvplpPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEE 803
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2024-2180 |
6.86e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.37 E-value: 6.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2024 SPRDtlDPA----EPGEKTPVRPVTQGGSLQSPPRSPRPASVrtrkhtfgqrcvsSRPAAPGGEEAEASDPADEEVSHIT 2099
Cdd:NF040712 178 TALD--DEArwliDPDFGRPLRPLATVPRLAREPADARPEEV-------------EPAPAAEGAPATDSDPAEAGTPDDL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2100 SSA-----CPWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQW-RPSAELGSGEPGEAKAWGPEAEPAL 2173
Cdd:NF040712 243 ASArrrraGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAAETPEAAEPPApAPAAPAAPAAPEAEEPARPEPPPAP 322
|
....*..
gi 53832011 2174 GARRKKK 2180
Cdd:NF040712 323 KPKRRRR 329
|
|
| PHA03309 |
PHA03309 |
transcriptional regulator ICP4; Provisional |
1933-2312 |
7.26e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165564 [Multi-domain] Cd Length: 2033 Bit Score: 45.23 E-value: 7.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1933 PASAPHPRPLQ---EVEMETYGAGTPLGSvaSVHSPPAESCASLQIPLAVSSPARSGEPLHALSP--RGTARSPS----- 2002
Cdd:PHA03309 1535 PAAPPGPELADrhaDRRRSTKGPQRPGGK--RPRSSSSSSSASHDRSPSSSSRRRDGRPSSRRRPsrRMSARPPSrppaa 1612
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2003 ------------LSRLLCRQEAVHTDSLEGKidsprDTLDPAEPGEKtPVRPVT-------QGGSLQSPPRSPRPASvrt 2063
Cdd:PHA03309 1613 vilraswryaeeVAREMLDAAASRFDEADGE-----DPLPPAACGGK-PIAPETlvalceqRGRGPTSLPRAPTPRS--- 1683
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2064 rkhtfGQRCVSSRPAApggeeaeASDPADEEVshitssaCPWQPTAE-PHGPEASPVAggERDLRRLYSVDAQGFLD--- 2139
Cdd:PHA03309 1684 -----GEALAAPRRSG-------AKDPRQGQY-------CPSARRSEaPHSPSPRDVA--LRLLERQQELNRQLLLElrr 1742
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2140 -------KPGRADEQWRPSAELGSGEPGEAKAWGPEA-EPALGARRKKKMSPPC--------------ISV-EPPAEDEG 2196
Cdd:PHA03309 1743 gsceispSPRRRDAEGRRFGCRQDDDDGYDYEGGRESpERVLGRRQSRRDSVPVrrrsgaancggrwmISAgRSSSSSSS 1822
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2197 SARPSAAEGGSTTLRRRTPSCEATPHRDSLEPTEGSGAG-----GDPAAKGERWG-QASCRAEHL---TVPSFAFEPLDL 2267
Cdd:PHA03309 1823 SSSSSSSSPSSRPSRSATPSLSPSPSPPRRAPVDRSRSGrrrerDRPSANPFRWApRQRSRADHSpdgTAPGDAPLNLED 1902
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 53832011 2268 GVPSGDPFLDGSHSVTPESRASSSGAIVPLEPPESEPPMPVGDPP 2312
Cdd:PHA03309 1903 GPGRGRPIWTPSSATTLPSRSGPEDSVDETETEDSAPPARLAPSP 1947
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
1954-2342 |
1.28e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 44.29 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1954 TPLGSVASV--HSPPAESCASLQIPLAVSSPARSGEPLhalsprgtaRSPSLSRLLCRQEAVHTDSLEGKIdsprdtLDP 2031
Cdd:PHA03378 444 TPHSQAPTVvlHRPPTQPLEGPTGPLSVQAPLEPWQPL---------PHPQVTPVILHQPPAQGVQAHGSM------LDL 508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2032 AEPGEKTPVRPVTqggSLQSPPRSPRPASVRTRKHTFGQR--CVSSRPA-----------APGGEEAEASDPADEEVSHI 2098
Cdd:PHA03378 509 LEKDDEDMEQRVM---ATLLPPSPPQPRAGRRAPCVYTEDldIESDEPAstepvhdqllpAPGLGPLQIQPLTSPTTSQL 585
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2099 TSSA-----CPW---QPTAEPHGPEASPVAGGERDLRR----LYSVDAQGFLDKPGRADEQWRPSAElgsgepgeakaWG 2166
Cdd:PHA03378 586 ASSApsyaqTPWpvpHPSQTPEPPTTQSHIPETSAPRQwpmpLRPIPMRPLRMQPITFNVLVFPTPH-----------QP 654
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2167 PEAEPALgaRRKKKMSPPCISVEP-PAEDEGSARPSAAEGgsttlRRRTPSCEATPHRdslePTEGsgaggdPAAKGERW 2245
Cdd:PHA03378 655 PQVEITP--YKPTWTQIGHIPYQPsPTGANTMLPIQWAPG-----TMQPPPRAPTPMR----PPAA------PPGRAQRP 717
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2246 GQASCRAehltvPSFAFEPLDLGVPSGDPFLDGSHSVTPESRASSSGAIVPLEPPESEPPMPVGDPPEKrrglyltVPQC 2325
Cdd:PHA03378 718 AAATGRA-----RPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQ-------APPA 785
|
410
....*....|....*...
gi 53832011 2326 PLEKP-GSPSATPAPGGG 2342
Cdd:PHA03378 786 PQQRPrGAPTPQPPPQAG 803
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
875-1018 |
1.56e-03 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 42.26 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 875 QADGGLSVLRTFRLLRVLKLVRFlpalRRQLVVLVKTM----DNVATFCTLLMLFIFIFSILGMHLFGCKFSlktdtgdt 950
Cdd:pfam08016 95 LYRIILAFLVFLTWLKLFKVLRF----NKTMSLFTKTLsrawKDLAGFALMFVIFFFAYAQFGYLLFGTQAP-------- 162
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 53832011 951 vpdrkNFDSLLWAIVTVFQILtqedWNVVLYNGMASTSSW-AALYFVALMTFGNYVLFNLLVAILVEGF 1018
Cdd:pfam08016 163 -----NFSNFVKSILTLFRTI----LGDFGYNEIFSGNRVlGPLLFLTFVFLVIFILLNLFLAIINDSY 222
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1993-2249 |
2.71e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.91 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 1993 SPRGTARSPSLSRLLCRQEAVHTDSLEGKIDSPRDTLDPAEPGEKTPvRPVTQGGS--LQSPPRSPRPASVRTR--KHTF 2068
Cdd:PRK07003 366 GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAP-KAAAAAAAtrAEAPPAAPAPPATADRgdDAAD 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2069 GQRCVSSRPAAPGGEEAEASDPADEEVSHITSSACPWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGfLDKPGRADE-- 2146
Cdd:PRK07003 445 GDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARA-PAAASREDApa 523
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53832011 2147 -QWRPSAELGSGEPGEAK--AWGPEAEPALGARRKKKMSppcISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHR 2223
Cdd:PRK07003 524 aAAPPAPEARPPTPAAAApaARAGGAAAALDVLRNAGMR---VSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPR 600
|
250 260
....*....|....*....|....*.
gi 53832011 2224 DSLEPTEGSGAGGDPAAKGERWGQAS 2249
Cdd:PRK07003 601 ARAATGDAPPNGAARAEQAAESRGAP 626
|
|
| |
