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Conserved domains on  [gi|50540520|ref|NP_001002725|]
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palmitoyltransferase ZDHHC3-A [Danio rerio]

Protein Classification

DHHC family palmitoyltransferase( domain architecture ID 10479004)

DHHC family palmitoyltransferase may catalyze the addition of palmitate onto various protein substrates and be involved in a variety of cellular processes

EC:  2.3.1.-
Gene Ontology:  GO:0016409|GO:0043543|GO:0016747
PubMed:  21388813|32522557|21204476

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DHHC pfam01529
DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which ...
 126-253 3.27e-39

DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which are palmitoyltransferases. Palmitoylation or, more specifically S-acylation, plays important roles in the regulation of protein localization, stability, and activity. It is a post-translational protein modification that involves the attachment of palmitic acid to Cys residues through a thioester linkage. Protein acyltransferases (PATs), also known as palmitoyltransferases, catalyze this reaction by transferring the palmitoyl group from palmitoyl-CoA to the thiol group of Cys residues. They are characterized by the presence of a 50-residue-long domain called the DHHC domain, which in most but not all cases is also cysteine-rich and gets its name from a highly conserved DHHC signature tetrapeptide (Asp-His-His-Cys). The Cys residue within the DHHC domain forms a stable acyl intermediate and transfers the acyl chain to the Cys residues of a target protein. Some proteins containing a DHHC domain include Drosophila DNZ1 protein, Mouse Abl-philin 2 (Aph2) protein, Mammalian ZDHHC9, Yeast ankyrin repeat-containing protein AKR1, Yeast Erf2 protein, and Arabidopsis thaliana tip growth defective 1.


:

Pssm-ID: 396215  Cd Length: 132  Bit Score: 134.80  E-value: 3.27e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520   126 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYICLISLHSLVMVVFHFLNCFEDDWTKCST 205
Cdd:pfam01529   7 YCSTCNIYKPPRSKHCRVCNRCVLRFDHHCPWLNNCIGKRNHKYFILFLLYLTLYLILYLVLSLYYLVKLIESSTLFFFL 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 50540520   206 FSPPATVILLILLCfeGLLFLIFTSVMFGTQVHSICTDETGIEKLKRE 253
Cdd:pfam01529  87 ILFLFSISIILLIL--SLFFLLFLGILLFFHLYLISRNLTTYEFMKKK 132
TrbL super family cl43965
Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and ...
 43-88 9.03e-03

Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG3846:

Pssm-ID: 443056 [Multi-domain]  Cd Length: 443  Bit Score: 37.61  E-value: 9.03e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 50540520  43 IVCAIITWFLVFFAEFVV---LFVMLIPSKNLTYS---LVNGTLFNSLAFLA 88
Cdd:COG3846 142 IAVLLIAWLLVLIAFFILavqLFVTLIEFKLTTLAgfvLLPFGLSNKTSFLA 193
 
Name Accession Description Interval E-value
DHHC pfam01529
DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which ...
 126-253 3.27e-39

DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which are palmitoyltransferases. Palmitoylation or, more specifically S-acylation, plays important roles in the regulation of protein localization, stability, and activity. It is a post-translational protein modification that involves the attachment of palmitic acid to Cys residues through a thioester linkage. Protein acyltransferases (PATs), also known as palmitoyltransferases, catalyze this reaction by transferring the palmitoyl group from palmitoyl-CoA to the thiol group of Cys residues. They are characterized by the presence of a 50-residue-long domain called the DHHC domain, which in most but not all cases is also cysteine-rich and gets its name from a highly conserved DHHC signature tetrapeptide (Asp-His-His-Cys). The Cys residue within the DHHC domain forms a stable acyl intermediate and transfers the acyl chain to the Cys residues of a target protein. Some proteins containing a DHHC domain include Drosophila DNZ1 protein, Mouse Abl-philin 2 (Aph2) protein, Mammalian ZDHHC9, Yeast ankyrin repeat-containing protein AKR1, Yeast Erf2 protein, and Arabidopsis thaliana tip growth defective 1.


Pssm-ID: 396215  Cd Length: 132  Bit Score: 134.80  E-value: 3.27e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520   126 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYICLISLHSLVMVVFHFLNCFEDDWTKCST 205
Cdd:pfam01529   7 YCSTCNIYKPPRSKHCRVCNRCVLRFDHHCPWLNNCIGKRNHKYFILFLLYLTLYLILYLVLSLYYLVKLIESSTLFFFL 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 50540520   206 FSPPATVILLILLCfeGLLFLIFTSVMFGTQVHSICTDETGIEKLKRE 253
Cdd:pfam01529  87 ILFLFSISIILLIL--SLFFLLFLGILLFFHLYLISRNLTTYEFMKKK 132
COG5273 COG5273
Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];
50-231 4.82e-31

Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];


Pssm-ID: 227598 [Multi-domain]  Cd Length: 309  Bit Score: 118.31  E-value: 4.82e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520  50 WFLVFFAEFVVLFVMLIPSKNLTYSLVNGTLFNSLAFLALASHFRAMCTDPGAVPKGNATKEYIES----LQLKPGQVVY 125
Cdd:COG5273  31 FIGLFLLSRIVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETisrlLDDGKFGTEN 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520 126 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYICLISLHSLVMVVFHFLNcfeddWTKCST 205
Cdd:COG5273 111 FCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAG-----IFSIRH 185

                       170       180
                ....*....|....*....|....*.
gi 50540520 206 FsPPATVILLILLCFeGLLFLIFTSV 231
Cdd:COG5273 186 D-TSLAICFLIFGCS-LLGVVFFIIT 209
TrbL COG3846
Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and ...
 43-88 9.03e-03

Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 443056 [Multi-domain]  Cd Length: 443  Bit Score: 37.61  E-value: 9.03e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 50540520  43 IVCAIITWFLVFFAEFVV---LFVMLIPSKNLTYS---LVNGTLFNSLAFLA 88
Cdd:COG3846 142 IAVLLIAWLLVLIAFFILavqLFVTLIEFKLTTLAgfvLLPFGLSNKTSFLA 193
 
Name Accession Description Interval E-value
DHHC pfam01529
DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which ...
 126-253 3.27e-39

DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which are palmitoyltransferases. Palmitoylation or, more specifically S-acylation, plays important roles in the regulation of protein localization, stability, and activity. It is a post-translational protein modification that involves the attachment of palmitic acid to Cys residues through a thioester linkage. Protein acyltransferases (PATs), also known as palmitoyltransferases, catalyze this reaction by transferring the palmitoyl group from palmitoyl-CoA to the thiol group of Cys residues. They are characterized by the presence of a 50-residue-long domain called the DHHC domain, which in most but not all cases is also cysteine-rich and gets its name from a highly conserved DHHC signature tetrapeptide (Asp-His-His-Cys). The Cys residue within the DHHC domain forms a stable acyl intermediate and transfers the acyl chain to the Cys residues of a target protein. Some proteins containing a DHHC domain include Drosophila DNZ1 protein, Mouse Abl-philin 2 (Aph2) protein, Mammalian ZDHHC9, Yeast ankyrin repeat-containing protein AKR1, Yeast Erf2 protein, and Arabidopsis thaliana tip growth defective 1.


Pssm-ID: 396215  Cd Length: 132  Bit Score: 134.80  E-value: 3.27e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520   126 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYICLISLHSLVMVVFHFLNCFEDDWTKCST 205
Cdd:pfam01529   7 YCSTCNIYKPPRSKHCRVCNRCVLRFDHHCPWLNNCIGKRNHKYFILFLLYLTLYLILYLVLSLYYLVKLIESSTLFFFL 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 50540520   206 FSPPATVILLILLCfeGLLFLIFTSVMFGTQVHSICTDETGIEKLKRE 253
Cdd:pfam01529  87 ILFLFSISIILLIL--SLFFLLFLGILLFFHLYLISRNLTTYEFMKKK 132
COG5273 COG5273
Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];
50-231 4.82e-31

Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];


Pssm-ID: 227598 [Multi-domain]  Cd Length: 309  Bit Score: 118.31  E-value: 4.82e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520  50 WFLVFFAEFVVLFVMLIPSKNLTYSLVNGTLFNSLAFLALASHFRAMCTDPGAVPKGNATKEYIES----LQLKPGQVVY 125
Cdd:COG5273  31 FIGLFLLSRIVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETisrlLDDGKFGTEN 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50540520 126 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYICLISLHSLVMVVFHFLNcfeddWTKCST 205
Cdd:COG5273 111 FCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAG-----IFSIRH 185

                       170       180
                ....*....|....*....|....*.
gi 50540520 206 FsPPATVILLILLCFeGLLFLIFTSV 231
Cdd:COG5273 186 D-TSLAICFLIFGCS-LLGVVFFIIT 209
DUF3615 pfam12274
Protein of unknown function (DUF3615); This domain family is found in bacteria and eukaryotes, ...
 102-153 9.90e-04

Protein of unknown function (DUF3615); This domain family is found in bacteria and eukaryotes, and is typically between 86 and 97 amino acids in length. There is a conserved FAE sequence motif. There is a single completely conserved residue F that may be functionally important.


Pssm-ID: 463515  Cd Length: 94  Bit Score: 37.72  E-value: 9.90e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 50540520   102 AVPKGNATKEYIESL-----QLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDH 153
Cdd:pfam12274  37 AKTKGADSLDGTPKLffaevKHICGEEELVVTCCCPLEPDDNGHCYGCKNQGVDIKH 93
TrbL COG3846
Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and ...
 43-88 9.03e-03

Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 443056 [Multi-domain]  Cd Length: 443  Bit Score: 37.61  E-value: 9.03e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 50540520  43 IVCAIITWFLVFFAEFVV---LFVMLIPSKNLTYS---LVNGTLFNSLAFLA 88
Cdd:COG3846 142 IAVLLIAWLLVLIAFFILavqLFVTLIEFKLTTLAgfvLLPFGLSNKTSFLA 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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