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Conserved domains on  [gi|50539860|ref|NP_001002400|]
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guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13b [Danio rerio]

Protein Classification

GGL domain-containing protein( domain architecture ID 10049206)

G-protein gamma like (GGL) domain-containing protein is found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins; it is involved in signal transduction via G-protein-coupled receptors

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GGL cd00068
G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta ...
 6-62 2.71e-16

G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors


:

Pssm-ID: 238024  Cd Length: 57  Bit Score: 65.00  E-value: 2.71e-16
                       10        20        30        40        50
               ....*....|....*....|....*....|....*....|....*....|....*..
gi 50539860  6 LPQMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNPELMKNNPWVEKG 62
Cdd:cd00068  1 VDQLKKEVEQLRKELSRERLKVSKAAAELLKYCEQNAENDPLLTGPPSPSNPWIEKK 57
 
Name Accession Description Interval E-value
GGL cd00068
G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta ...
 6-62 2.71e-16

G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors


Pssm-ID: 238024  Cd Length: 57  Bit Score: 65.00  E-value: 2.71e-16
                       10        20        30        40        50
               ....*....|....*....|....*....|....*....|....*....|....*..
gi 50539860  6 LPQMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNPELMKNNPWVEKG 62
Cdd:cd00068  1 VDQLKKEVEQLRKELSRERLKVSKAAAELLKYCEQNAENDPLLTGPPSPSNPWIEKK 57
G-gamma pfam00631
GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the ...
 8-64 4.49e-12

GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta. All organizms that posses a G-beta possess a G-gamma.


Pssm-ID: 459879 [Multi-domain]  Cd Length: 69  Bit Score: 54.66  E-value: 4.49e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 50539860    8 QMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNP---ELMKNNPWVEKGKC 64
Cdd:pfam00631  6 KLKREIEQLREELKRERIKVSKACEELIDYCEQRSTKDPLLPGvwgPPAGENPWREDDGC 65
GGL smart00224
G protein gamma subunit-like motifs;
8-67 1.30e-11

G protein gamma subunit-like motifs;


Pssm-ID: 128520  Cd Length: 63  Bit Score: 53.43  E-value: 1.30e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 50539860     8 QMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNPELMKNNPWVE-KGKCVLL 67
Cdd:smart00224  3 QLRKEVEQLRKELSRERIKVSKAAEELLAYCEQHAEEDPLLTGPPPSKNPFIEdKTSCWIL 63
 
Name Accession Description Interval E-value
GGL cd00068
G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta ...
 6-62 2.71e-16

G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors


Pssm-ID: 238024  Cd Length: 57  Bit Score: 65.00  E-value: 2.71e-16
                       10        20        30        40        50
               ....*....|....*....|....*....|....*....|....*....|....*..
gi 50539860  6 LPQMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNPELMKNNPWVEKG 62
Cdd:cd00068  1 VDQLKKEVEQLRKELSRERLKVSKAAAELLKYCEQNAENDPLLTGPPSPSNPWIEKK 57
G-gamma pfam00631
GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the ...
 8-64 4.49e-12

GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta. All organizms that posses a G-beta possess a G-gamma.


Pssm-ID: 459879 [Multi-domain]  Cd Length: 69  Bit Score: 54.66  E-value: 4.49e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 50539860    8 QMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNP---ELMKNNPWVEKGKC 64
Cdd:pfam00631  6 KLKREIEQLREELKRERIKVSKACEELIDYCEQRSTKDPLLPGvwgPPAGENPWREDDGC 65
GGL smart00224
G protein gamma subunit-like motifs;
8-67 1.30e-11

G protein gamma subunit-like motifs;


Pssm-ID: 128520  Cd Length: 63  Bit Score: 53.43  E-value: 1.30e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 50539860     8 QMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNPELMKNNPWVE-KGKCVLL 67
Cdd:smart00224  3 QLRKEVEQLRKELSRERIKVSKAAEELLAYCEQHAEEDPLLTGPPPSKNPFIEdKTSCWIL 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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