intraflagellar transport protein 52 homolog [Danio rerio]
motility-associated ABC transporter substrate-binding family protein( domain architecture ID 581101)
motility-associated ABC transporter substrate-binding family protein such as the human intraflagellar transport protein Ift52, which is involved in ciliogenesis as part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia
List of domain hits
Name | Accession | Description | Interval | E-value | |||
IFT52_CTD | cd23683 | C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; IFT52 ... |
353-420 | 9.07e-37 | |||
C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; IFT52 is involved in ciliogenesis as part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance, and functioning of primary cilia. It is required for the anterograde transport of IFT88. IFT52 is a component of the IFT complex B that consists of a 9-subunit salt-stable core and several peripheral subunits. The model corresponds to the C-terminal domain of IFT52, which is responsible for binding to the C-terminal domain of IFT46. : Pssm-ID: 467897 Cd Length: 69 Bit Score: 128.81 E-value: 9.07e-37
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GldG super family | cl43813 | ABC-type uncharacterized transport system involved in gliding motility, auxiliary component ... |
24-116 | 5.28e-09 | |||
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility]; The actual alignment was detected with superfamily member COG3225: Pssm-ID: 442458 [Multi-domain] Cd Length: 494 Bit Score: 58.02 E-value: 5.28e-09
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Name | Accession | Description | Interval | E-value | |||
IFT52_CTD | cd23683 | C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; IFT52 ... |
353-420 | 9.07e-37 | |||
C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; IFT52 is involved in ciliogenesis as part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance, and functioning of primary cilia. It is required for the anterograde transport of IFT88. IFT52 is a component of the IFT complex B that consists of a 9-subunit salt-stable core and several peripheral subunits. The model corresponds to the C-terminal domain of IFT52, which is responsible for binding to the C-terminal domain of IFT46. Pssm-ID: 467897 Cd Length: 69 Bit Score: 128.81 E-value: 9.07e-37
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GldG | COG3225 | ABC-type uncharacterized transport system involved in gliding motility, auxiliary component ... |
24-116 | 5.28e-09 | |||
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility]; Pssm-ID: 442458 [Multi-domain] Cd Length: 494 Bit Score: 58.02 E-value: 5.28e-09
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ABC_transp_aux | pfam09822 | ABC-type uncharacterized transport system; This domain is found in various eukaryotic and ... |
28-116 | 5.63e-07 | |||
ABC-type uncharacterized transport system; This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins. Pssm-ID: 430853 Cd Length: 264 Bit Score: 50.73 E-value: 5.63e-07
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Name | Accession | Description | Interval | E-value | |||
IFT52_CTD | cd23683 | C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; IFT52 ... |
353-420 | 9.07e-37 | |||
C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; IFT52 is involved in ciliogenesis as part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance, and functioning of primary cilia. It is required for the anterograde transport of IFT88. IFT52 is a component of the IFT complex B that consists of a 9-subunit salt-stable core and several peripheral subunits. The model corresponds to the C-terminal domain of IFT52, which is responsible for binding to the C-terminal domain of IFT46. Pssm-ID: 467897 Cd Length: 69 Bit Score: 128.81 E-value: 9.07e-37
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GldG | COG3225 | ABC-type uncharacterized transport system involved in gliding motility, auxiliary component ... |
24-116 | 5.28e-09 | |||
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility]; Pssm-ID: 442458 [Multi-domain] Cd Length: 494 Bit Score: 58.02 E-value: 5.28e-09
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ABC_transp_aux | pfam09822 | ABC-type uncharacterized transport system; This domain is found in various eukaryotic and ... |
28-116 | 5.63e-07 | |||
ABC-type uncharacterized transport system; This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins. Pssm-ID: 430853 Cd Length: 264 Bit Score: 50.73 E-value: 5.63e-07
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Blast search parameters | ||||
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