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Conserved domains on  [gi|77020097|ref|YP_337892|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Andrias japonicus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009553)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214418  Cd Length: 322  Bit Score: 586.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    1 MKTCIMMHMTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAP 80
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   81 VLALTTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLIL 160
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  161 MTGSFSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMN 240
Cdd:MTH00071 161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  241 TLSTVMFLGPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVP 320
Cdd:MTH00071 241 TLSTILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320


                 ..
gi 77020097  321 PM 322
Cdd:MTH00071 321 PM 322
 
Name Accession Description Interval E-value
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 586.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    1 MKTCIMMHMTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAP 80
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   81 VLALTTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLIL 160
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  161 MTGSFSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMN 240
Cdd:MTH00071 161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  241 TLSTVMFLGPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVP 320
Cdd:MTH00071 241 TLSTILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320


                 ..
gi 77020097  321 PM 322
Cdd:MTH00071 321 PM 322
NADHdh pfam00146
NADH dehydrogenase;
12-307 1.45e-121

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 351.00  E-value: 1.45e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    92 APMPM--PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMG 169
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   170 FITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLG 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 77020097   250 PYFNPWNPYLFTIdLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTI 307
Cdd:pfam00146 243 GWLGPFPLPGLLW-FLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLL 299
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 12-304 2.35e-112

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 328.63  E-value: 2.35e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:COG1005  16 LVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAF 95

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  92 APMPM--PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMG 169
Cdd:COG1005  96 AVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSE 175

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097 170 FITTQ-NHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFL 248
Cdd:COG1005 176 IVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFL 255

                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 77020097 249 GPYFNPWNPYLFT-----IDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIA 304
Cdd:COG1005 256 GGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
18-303 3.21e-57

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 187.99  E-value: 3.21e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   18 ILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIWAPMPM- 96
Cdd:NF040610  23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFg 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   97 ---------PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSL 167
Cdd:NF040610 103 aviingveyPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  168 MGFITTQNHLWFIIpAWPIASM-WFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVM 246
Cdd:NF040610 183 VEIVEAQSPIWFAF-LQPIGFIvFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLL 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 77020097  247 FLG----PYFNPWNPYLF----TIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITI 303
Cdd:NF040610 262 FLGgwnlPGFVTDIPVLGiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 586.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    1 MKTCIMMHMTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAP 80
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   81 VLALTTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLIL 160
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  161 MTGSFSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMN 240
Cdd:MTH00071 161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  241 TLSTVMFLGPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVP 320
Cdd:MTH00071 241 TLSTILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320


                 ..
gi 77020097  321 PM 322
Cdd:MTH00071 321 PM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-323 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 531.10  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    1 MKTCIMMH-MTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIA 79
Cdd:MTH00134   1 MLSTLITHiINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   80 PVLALTTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLI 159
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  160 LMTGSFSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFM 239
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  240 NTLSTVMFLGPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGV 319
Cdd:MTH00134 241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320


                 ....
gi 77020097  320 PPMI 323
Cdd:MTH00134 321 PPQL 324
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 524.84  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    1 MKTCIMMHMTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAP 80
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   81 VLALTTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLIL 160
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  161 MTGSFSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMN 240
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  241 TLSTVMFLGPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVP 320
Cdd:MTH00111 241 TLTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ..
gi 77020097  321 PM 322
Cdd:MTH00111 321 PQ 322
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-321 3.28e-180

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 500.31  E-value: 3.28e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    7 MHMTPIF-YILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALT 85
Cdd:MTH00104   1 MFMINILlLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   86 TSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSF 165
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  166 SLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTV 245
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 77020097  246 MFLGPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVPP 321
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPP 316
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-321 6.53e-151

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 425.86  E-value: 6.53e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    5 IMMHMTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLAL 84
Cdd:MTH00218   2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   85 TTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGS 164
Cdd:MTH00218  82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  165 FSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLST 244
Cdd:MTH00218 162 FSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSV 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 77020097  245 VMFLGPYFNpwnpylfTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVPP 321
Cdd:MTH00218 242 ILFLGTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 12-322 7.84e-147

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 415.91  E-value: 7.84e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:MTH00040  11 LSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLW 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   92 APMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGFI 171
Cdd:MTH00040  91 SLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSIS 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  172 TTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLGP- 250
Cdd:MTH00040 171 NSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGg 250

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 77020097  251 -YFNPWNPyLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVPPM 322
Cdd:MTH00040 251 sPFNEIFP-INIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPPN 322
NADHdh pfam00146
NADH dehydrogenase;
12-307 1.45e-121

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 351.00  E-value: 1.45e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    92 APMPM--PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMG 169
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   170 FITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLG 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 77020097   250 PYFNPWNPYLFTIdLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTI 307
Cdd:pfam00146 243 GWLGPFPLPGLLW-FLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLL 299
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 12-315 2.94e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 348.27  E-value: 2.94e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:MTH00195   9 LIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILW 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   92 APMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGFI 171
Cdd:MTH00195  89 VPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMV 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  172 TTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLGPY 251
Cdd:MTH00195 169 ISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 77020097  252 fnpwnpylFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIA 315
Cdd:MTH00195 249 --------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFA 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 9-304 1.61e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 341.08  E-value: 1.61e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    9 MTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSL 88
Cdd:MTH00143   5 LSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILAL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   89 MIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLM 168
Cdd:MTH00143  85 LLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  169 GFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFL 248
Cdd:MTH00143 165 EISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFF 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 77020097  249 GpyFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIA 304
Cdd:MTH00143 245 G--GSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLS 298
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-314 2.03e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 338.28  E-value: 2.03e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097    5 IMMHMTPIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLAL 84
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   85 TTSLMIWAPMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGS 164
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  165 FSLMGFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLST 244
Cdd:MTH00193 162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  245 VMFLGPYFnpwnpylFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPI 314
Cdd:MTH00193 242 LMFLGGDL-------LSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 15-311 3.82e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 330.07  E-value: 3.82e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   15 ILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIWAPM 94
Cdd:MTH00225  11 LICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLY 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   95 PMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGFITTQ 174
Cdd:MTH00225  91 PSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQ 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  175 NHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLGPYFNp 254
Cdd:MTH00225 171 KYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFV- 249

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 77020097  255 wnpyLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHIS 311
Cdd:MTH00225 250 ----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 12-304 2.35e-112

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 328.63  E-value: 2.35e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:COG1005  16 LVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAF 95

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  92 APMPM--PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMG 169
Cdd:COG1005  96 AVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSE 175

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097 170 FITTQ-NHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFL 248
Cdd:COG1005 176 IVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFL 255

                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 77020097 249 GPYFNPWNPYLFT-----IDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIA 304
Cdd:COG1005 256 GGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 15-321 2.53e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 323.60  E-value: 2.53e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   15 ILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIWAPM 94
Cdd:MTH00054  12 LVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   95 PM--PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGFIT 172
Cdd:MTH00054  92 PYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVL 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  173 TQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLGPYF 252
Cdd:MTH00054 172 AQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWL 251

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 77020097  253 NPWNPYLFTIDLM---IKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVPP 321
Cdd:MTH00054 252 VISGPTSYFSNFVwfgIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
11-304 1.18e-107

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 316.36  E-value: 1.18e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   11 PIFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMI 90
Cdd:PRK06076  16 AVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLA 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   91 WAPMPM--PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLM 168
Cdd:PRK06076  96 WAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLS 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  169 GFITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFL 248
Cdd:PRK06076 176 DIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFL 255

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 77020097  249 G---PYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIA 304
Cdd:PRK06076 256 GgwlPPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLV 314
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 12-321 2.12e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 313.60  E-value: 2.12e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:MTH00216  13 LIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVW 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   92 APMPMP--YTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMG 169
Cdd:MTH00216  93 GVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITE 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  170 FITTQNH-LWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFL 248
Cdd:MTH00216 173 IVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFL 252

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 77020097  249 GPYFNPwNPYLF--TIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMPIAWMGVPP 321
Cdd:MTH00216 253 GGWLSP-IKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 12-321 9.95e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 274.20  E-value: 9.95e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:MTH00029  14 LIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAW 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   92 APMPMPYT--LSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMG 169
Cdd:MTH00029  94 AIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISE 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  170 FITTQNHLWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLG 249
Cdd:MTH00029 174 IVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLG 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  250 ----PYFNPWNPYLF------------TIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISMP 313
Cdd:MTH00029 254 gwlsPLDGIPTPPEAfsifeqiassksSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGIL 333


                 ....*...
gi 77020097  314 IAWMGVPP 321
Cdd:MTH00029 334 IGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 19-317 4.26e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 268.96  E-value: 4.26e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   19 LLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIWAPMPMPY 98
Cdd:MTH00010  17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   99 TLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGFITTQNHlW 178
Cdd:MTH00010  97 PSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-W 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  179 FIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLgpyfnPWNPY 258
Cdd:MTH00010 176 ILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT-----SFIPS 250

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 77020097  259 LFTIDLMI--KVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIyhISMPIAWM 317
Cdd:MTH00010 251 IFISDLMLilKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMFL 309
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 18-312 1.09e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 208.21  E-value: 1.09e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   18 ILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIWAPMPMP 97
Cdd:MTH00090   9 ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYF 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   98 YTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGfittQNHL 177
Cdd:MTH00090  89 FDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS----SFSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  178 WFIIpawpIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFLGpyFNpwnp 257
Cdd:MTH00090 165 SLFV----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK--FS---- 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 77020097  258 ylftidlMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITIAYTIYHISM 312
Cdd:MTH00090 235 -------FLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
18-303 3.21e-57

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 187.99  E-value: 3.21e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   18 ILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIWAPMPM- 96
Cdd:NF040610  23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFg 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   97 ---------PYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSL 167
Cdd:NF040610 103 aviingveyPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  168 MGFITTQNHLWFIIpAWPIASM-WFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVM 246
Cdd:NF040610 183 VEIVEAQSPIWFAF-LQPIGFIvFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLL 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 77020097  247 FLG----PYFNPWNPYLF----TIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFLPITI 303
Cdd:NF040610 262 FLGgwnlPGFVTDIPVLGiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ndhA CHL00032
NADH dehydrogenase subunit 1
 11-301 1.61e-55

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 184.38  E-value: 1.61e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   11 PIF-YILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLM 89
Cdd:CHL00032  32 PILtLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILL 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   90 IWAPMPMPY--TLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSL 167
Cdd:CHL00032 112 SYLVIPFGYhlVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLST 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  168 MGFITTQN-------HLW-----FIIpawpiasmWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTN 235
Cdd:CHL00032 192 VDIVEAQSkygfwgwNLWrqpigFIV--------FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLN 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  236 ILFMNTLSTVMFLG------PYFNpwNPYLFTIDLMIKV--------MVLSSTFLWI------RASYPRFRYDQLMHLIW 295
Cdd:CHL00032 264 LLVSSLFVTVLYLGgwnlsiPYIF--IPELFEINKTGGVfgttigifITLAKTYLFLfisittRWTLPRLRMDQLLNLGW 341


                 ....*.
gi 77020097  296 KNFLPI 301
Cdd:CHL00032 342 KFLLPI 347
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 12-305 6.53e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 175.50  E-value: 6.53e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   12 IFYILPILLAVAFLTLIERKVLGYMQLRKGPNIVGPTGVLQPLADGLKLFIKEPVRPSTSSKTLFLIAPVLALTTSLMIW 91
Cdd:MTH00058   8 LEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYC 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   92 APMPMPYTLSNINLGILFILALSSLAVYSILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLILMTGSFSLMGFI 171
Cdd:MTH00058  88 FIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFY 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  172 TTQNHLWFIIPawPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILFMNTLSTVMFlgpy 251
Cdd:MTH00058 168 YSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF---- 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 77020097  252 fnpWNPYLFTIDLMIKVMVlsstFLWIRASYPRFRYDQLMHLIWKNFLPITIAY 305
Cdd:MTH00058 242 ---FGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILS 288
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
9-299 4.39e-34

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 126.45  E-value: 4.39e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097   9 MTPIFYILPILLAVAFLTL----IERKVLGYMQLRKGPnivgptGVLQPLADGLKLFIKEPVRPSTSSKtLFLIAPVLAL 84
Cdd:COG0650   1 MMLILLALLQLLLALLLAPlllgIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVAL 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097  85 TTSLMIWAPMPMPYTLSNIN-----LGILFILALSSLAvysILTSGWASNSKYALIGAIRAVAQTISYEVTLGLILLCLI 159
Cdd:COG0650  74 AAMLLAALLVPVLTTGPPLSfsgdlIVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALA 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020097 160 LMTGSFSLMGFITTQNH---LWFIIPAWPIASMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNI 236
Cdd:COG0650 151 LLAGSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKL 230

                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 77020097 237 LFMNTLSTVMFLgPYFNPWNPYLFTIDLMIKVMVLSSTFLWIRASYPRFRYDQLMHLIWKNFL 299
Cdd:COG0650 231 FVLLSLFVNLFL-PWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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