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Conserved domains on  [gi|2281537661|ref|YP_010429328|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Ictonyx libycus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.18e-63

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 187.84  E-value: 3.18e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2281537661  81 STNLKTTLTMALALIILLAASLAYEWTEEGLEWNE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.18e-63

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 187.84  E-value: 3.18e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2281537661  81 STNLKTTLTMALALIILLAASLAYEWTEEGLEWNE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-78 6.34e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 84.78  E-value: 6.34e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2281537661  18 ILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWA 59
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-78 7.00e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.15  E-value: 7.00e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2281537661   7 LIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWA 81
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.18e-63

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 187.84  E-value: 3.18e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2281537661  81 STNLKTTLTMALALIILLAASLAYEWTEEGLEWNE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 8.05e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 141.21  E-value: 8.05e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMA-LIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136    1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2281537661  80 QSTNLKTTLTMALALIILLAASLAYEWTEEGLEWNE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 2.36e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 134.74  E-value: 2.36e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   3 MMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQST 82
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2281537661  83 NLKTTLTMALALIILLAASLAYEWTEEGLEWNE 115
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 4.94e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 128.85  E-value: 4.94e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2281537661  81 STNLKTTLTMALALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 3.40e-35

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 117.00  E-value: 3.40e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2281537661  81 STNLKTTLTMALALIILLAASLAYEWTEEGLEWNE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 3.30e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 104.21  E-value: 3.30e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   3 MMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQST 82
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2281537661  83 NlkTTLTMALALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00203   84 S--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 4.58e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 88.51  E-value: 4.58e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYM--EKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWA 78
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMdrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2281537661  79 SQSTNLKTTLTMALALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-113 5.61e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 5.61e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYM-EKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWAS 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2281537661  80 QSTNLKTTLTMALALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-78 6.34e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 84.78  E-value: 6.34e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2281537661  18 ILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWA 59
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 2-113 1.02e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 84.83  E-value: 1.02e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   2 NMMMALIVNVSLASLLILIAFWL-PQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2281537661  81 STNLKTTLTMALALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 2.47e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.13  E-value: 2.47e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWL--PQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWA 78
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2281537661  79 SQSTNLKTTLTMALALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-113 1.10e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 72.43  E-value: 1.10e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661  32 EKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQSTNLKTTLTMaLALIILLAASLAYEWTEEGL 111
Cdd:MTH00055   37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVM-YLFLIILTIGLIYEWVKGGL 115


                  ..
gi 2281537661 112 EW 113
Cdd:MTH00055  116 EW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 2.29e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 71.25  E-value: 2.29e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2281537661  81 STNLKTTLTMaLALIILLAASLAYEWTEEGLEW 113
Cdd:MTH00018   81 QIAPFGFWTM-VGFLFILTLGLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-78 7.00e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.15  E-value: 7.00e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2281537661   7 LIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWA 81
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-78 1.44e-15

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 66.81  E-value: 1.44e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2281537661   7 LIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWA 84
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-114 2.25e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 61.49  E-value: 2.25e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661  32 EKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLPWASQSTNLkTTLTMALALIILLAASLAYEWTEEGL 111
Cdd:MTH00030   42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNL-FSFWIVYTFLIVLAIGLAYEWIKGGL 120


                  ...
gi 2281537661 112 EWN 114
Cdd:MTH00030  121 EWD 123
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 1.72e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.20  E-value: 1.72e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661  33 KASPYECGFDPLGSARLP--FSMKFFLVAVTFLLFDLEIALLLPlpWASQSTNLKT-TLTMALALIILLAASLAYEWTEE 109
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfGLVEMALFMLTVFVAYAYVWRRG 114


                  ....*
gi 2281537661 110 GLEWN 114
Cdd:PRK07928  115 GLEWD 119
ndhC CHL00022
NADH dehydrogenase subunit 3
 13-78 2.64e-06

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 43.05  E-value: 2.64e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661  13 LASLLILIAFWLPQL----NVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:CHL00022   16 ISSLIPILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWA 83
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-73 4.88e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.19  E-value: 4.88e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2281537661   1 MNMMMALIVNVSLASLLILIAFWLPQLNVYMEKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLL 73
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-114 5.48e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 39.34  E-value: 5.48e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2281537661  32 EKASPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPlpWASQSTNLKT-TLTMALALIILLAASLAYEWTEEG 110
Cdd:PRK07756   41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118


                  ....
gi 2281537661 111 LEWN 114
Cdd:PRK07756  119 LQWL 122
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-76 5.94e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.11  E-value: 5.94e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2281537661  35 SPYECGFDPLGSARLPFSMKFFLVAVTFLLFDLEIALLLPLP 76
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-78 2.31e-03

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 35.03  E-value: 2.31e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2281537661  33 KASPYECGFDPLGSARlPFSMKFFLVAVTFLLFDLEIALLlpLPWA 78
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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