|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.72e-167 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 468.92 E-value: 5.72e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1079485365 321 VNTWVAILTATSIMLLPISPMIAVII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.34e-136 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 390.82 E-value: 3.34e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 1079485365 321 VNTWVAILTATSIMLLPISPMIAVII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
2.35e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 388.78 E-value: 2.35e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSlDSTTLTLMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|...
gi 1079485365 321 VNTW-VAILTATSIMLLPISPMI 342
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAI 342
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
9.42e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 341.44 E-value: 9.42e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAISLLSLLGLFFYLRLAYCATITLPPHTTN-HMKRWHTNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKWQFENT 320
|
330 340
....*....|....*....|...
gi 1079485365 320 PVNTWVAILTATSIMLLPISPMI 342
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPML 343
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
5.97e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.11 E-value: 5.97e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|..
gi 1079485365 321 VNTWVAILTATSIMLLPISPMI 342
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQL 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-265 |
7.49e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 260.25 E-value: 7.49e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260
....*....|....*....|....*
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFI 265
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
2.04e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 196.97 E-value: 2.04e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 1 MNPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 tgqwdITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSldsTTLTLMAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINN---NFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKrwHTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK--KKKNK 310
|
330 340
....*....|....*....|..
gi 1079485365 321 VNTWVAILTATSIMLLPISPMI 342
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-275 |
3.84e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 167.37 E-value: 3.84e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 5 AKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 85 DITqlthplscLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLD-STTLTLMAILSAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 164 MGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSiKVLKLSTIMTAWAKTPALSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270
....*....|....*....|....*....|..
gi 1079485365 244 LMLTLLSLAGLPPLTGFLPKWLVIQELTKQNM 275
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-275 |
7.62e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.79 E-value: 7.62e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 7 LIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSmnnawyTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 87 TQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAILSAAMGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 167 WMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPALSAMLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260
....*....|....*....|....*....
gi 1079485365 247 TLLSLAGLPPLTGFLPKWLVIQELTKQNM 275
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSM 271
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-275 |
1.28e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 142.50 E-value: 1.28e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 8 IFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSM---NNAWytgqw 84
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSlsfSNLY----- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 85 ditqlTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSttLTLMAILSAAM 164
Cdd:MTH00197 77 -----LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMG--LLICSVLSSLI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 165 GGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTAWAKTPALSAML 244
Cdd:MTH00197 150 GGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFL 229
|
250 260 270
....*....|....*....|....*....|.
gi 1079485365 245 MLTLLSLAGLPPLTGFLPKWLVIQELTKQNM 275
Cdd:MTH00197 230 GLSFLSLGGLPPLSGFFLKWLILTSLLSSNI 260
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-279 |
2.12e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 120.22 E-value: 2.12e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 8 IFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMIS-KSHHPRAIEAATKYFLIQAAASTLVLF-SSMNNAwYTGQWD 85
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 86 ITQLTHPLS------------CLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKL----PPMTLLYMTSQSL 149
Cdd:COG1007 185 LAGIAAALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 150 DS---TTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLAL--LNFYL--YSLMTAAVFLTLNSI 222
Cdd:COG1007 265 AAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLL 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1079485365 223 -KVLKLSTIMTAWA----KTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMA 279
Cdd:COG1007 345 sRKGGEAEEIEDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLA 406
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
6.36e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.48 E-value: 6.36e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 23 SNHWVMAWTGLEINTLAILPMI-SKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 91 HPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLL-STAMKLPP-----MTLLYMTSQSLDSTTLTLMAILSAAM 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 165 GGWMGLNQTQIRKIMAFSSISHLGWMAAIM----VYNPKLALLNFYLYSLMTAAVFLTLNSIKVLKLST----IMTAWAK 236
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1079485365 237 T-PALSAMLMLTLLSLAGLPPLTGFLPKWLVIQ 268
Cdd:pfam00361 241 TmPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
3.07e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.12 E-value: 3.07e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 15 LGTTITMSSNHWVMAWTGLEINTLAILPMI-SKSHHPRAIEAATKYFLIQAAASTLVLFS-------------SMNNAWY 80
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYmtSQSLDSTTLTLMAIL 160
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 161 SAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYNP----KLALLNFYLYSLMTAAVFLTLNSIKVLK--LSTIMTAW 234
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSGLS 241
|
250 260 270
....*....|....*....|....*....|...
gi 1079485365 235 AKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVI 267
Cdd:MTH00196 242 RRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
9-279 |
3.60e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.45 E-value: 3.60e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 9 FVLSLM--LGTTITMSSNHWVMAWTGLEINTLA--ILPMISKsHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQW 84
Cdd:PRK05777 106 YLLVLFalLGMMVMVSANDLLTLFLGLELLSLPlyALAALRR-DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 85 DITQLTHPLS------------CLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKL----PPMTLLYMTSQS 148
Cdd:PRK05777 185 SFAGIAKALAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 149 LD---STTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWM---AAIMVYNPKLALLnFYL--YSLMTAAVF--LT 218
Cdd:PRK05777 265 LSedwQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEGYSAVL-FYLlaYLFMTLGAFgvIS 343
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1079485365 219 LNSIKVLKLSTImTAWA----KTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMA 279
Cdd:PRK05777 344 LLRRKGGEAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA 407
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-275 |
1.25e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.96 E-value: 1.25e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 8 IFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMIS-KSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDI 86
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 87 TQLTHPLSCLILT------------TAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLP---PMTLLYMTSQSLDS 151
Cdd:TIGR01770 186 EDLLLFLSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYILFGFS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 152 TTLTLM----AILSAAMGGWMGLNQTQIRKIMAFSSISHLGW----MAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIK 223
Cdd:TIGR01770 266 EAWQIFlaiiAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiligLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLR 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1079485365 224 VLKLSTI-----MTAWAKT-PALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNM 275
Cdd:TIGR01770 346 SYKDEWIeyisdFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGL 403
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-267 |
7.21e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 104.71 E-value: 7.21e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 8 IFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMIS-KSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 87 TQLTHPLSC----LILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSqsLDSTTLTLMAILSA 162
Cdd:MTH00199 181 QGINSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIG--PVTNVVLICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 163 AMGGWMGLNQTQIRKIMAFSSISHLG---WMAAIMVYNPKLA-LLNFYLYSLMTAAVFLTLNSIKVLK--LSTIMTAWAK 236
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESIQAsLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRK 338
|
250 260 270
....*....|....*....|....*....|.
gi 1079485365 237 TPALSAMLMLTLLSLAGLPPLTGFLPKWLVI 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-282 |
4.91e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 87.51 E-value: 4.91e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 9 FVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDITQ 88
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 89 LTHPLS----------CLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAM-KLPP------MTLLYMTSQSLD- 150
Cdd:COG0651 192 LAARLAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvLTLLFGADPALFl 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 151 STTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWM-AAIMVYNPkLALLNFYLY----SLMTAAVFLTLNSIKVL 225
Cdd:COG0651 272 GTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIlLGLGLGTP-LGLAGALFHllnhALAKALLFLAAGAIERA 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1079485365 226 ----KLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAI 282
Cdd:COG0651 351 tgtrDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVL 411
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-267 |
4.35e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 85.30 E-value: 4.35e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 3 PQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAI---------EAATKYFLIQAAASTLVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 74 SMNNAWYTGQ--------------WDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPM 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVY 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 140 TLLymTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWM---AAIMVYNPKLALLNFYLYSLMTAAVF 216
Cdd:MTH00198 347 ILL--TSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligVSAGTYESLQASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1079485365 217 LTL----------------------NSIKVLKLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVI 267
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
2.04e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.97 E-value: 2.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 7 LIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHP-RAIEAATKYFLIQAAASTLVL--FSsmnnaWYTGQ 83
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFS-----WLYGL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 84 -------WDI------TQLTHPLSCLI----LTTAIAMKLGLAPFHFWFPEVLQGS-----------SLTTGLLLSTAMk 135
Cdd:CHL00049 189 sggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSptpvvaflsvtSKVAASALATRI- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 136 lppMTLLYMTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGW-MAAIMVYNPKLALLNFYLYSLMTaa 214
Cdd:CHL00049 268 ---FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNDGYASMITYMLFY-- 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1079485365 215 VFLTLNSIKVLKLSTIMTA----------WAKTPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 343 IFMNLGTFACIVLFGLRTGtdnirdyaglYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.90e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 67.38 E-value: 2.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 50 PRAIEAATKYFLIQAAASTLVLF-SSMNNAWYTGQWDITQLTHPLS---------CLILTTA-IAMKLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALItspslglalALVFVIAgIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 119 LQGSSLTTGLLLSTAMKLP----PMTLLYMTSQSLDS---TTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 192 AIMVYNPKLALLNFYLYslMTAAVFLTLNSIKVLKLSTIMTA----------WAKTPALSAMLMLTLLSLAGLPPLTGFL 261
Cdd:PRK02504 317 IGLVAGTEAGYASMVFY--LLAYLFMNLGAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 1079485365 262 PK 263
Cdd:PRK02504 395 GK 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-282 |
5.84e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.56 E-value: 5.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 2 NPQAKLIFVLSLMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHpRAIEAATKYFLIQAAASTLVLFSSMNNAWYT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 82 GQWDIT-------QLTHPLSCLILTTAIA----MKLGLAPFHFWFPE-----------VLQGSSLTTG---LLLSTAMkL 136
Cdd:PRK08668 175 GTFDFAdisqgliNDTSTGFALIVFLFLLafgvAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygFLLVLYV-L 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 137 PPMTLLY----MTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGW-MAAIMVYNP---KLALLNFYLY 208
Cdd:PRK08668 254 PGTKLFSefgtYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSlgfAGGLFHVFNH 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1079485365 209 SLMTAAVFLTLNSI----KVLKLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAI 282
Cdd:PRK08668 334 ALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-266 |
9.34e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.81 E-value: 9.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 7 LIFVLSL-MLGTTITMSS-NHWVMawtgLEINTLAILPMIS-KSHHPRAIEAATKYFLIQAAASTLVLFS---------S 74
Cdd:PRK08376 126 LILLLELgMLGMAITGDLfNFFVF----LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygT 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 75 MNNAWYTGQWDIT-QLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQG--SSLTTGLLLSTAMKLPPM--TLLYMTSQSL 149
Cdd:PRK08376 202 LNMAYLAVKMSENpTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 150 DSTTL----TLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWM-----AAIMVYNPKL-----------ALLNFYLYS 209
Cdd:PRK08376 282 NLATVgwviIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAmasygeialagGIYHIVNHA 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1079485365 210 LMTAAVFLTLNSIkVLKLSTI----MTAWAKT-PALSAMLMLTLLSLAGLPPLTGFLPKWLV 266
Cdd:PRK08376 362 LYKALLFLTAGAV-IYETGTRnlneLGGLARTmPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
1.61e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.02 E-value: 1.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 38 LAILPM---ISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQW--DITQLT-HPLS-------CLILTTAIAM 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPltaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 105 KLGLAPFHFWFPEVLQGSSLTTGLLLSTAM-KLP-------PMTLLYMTSQSLdSTTLTLMAILSAAMGGWMGLNQTQIR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYF-APLLAALGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 177 KIMAFSSISHLGWM-AAIMVYNP---KLALLNFYLYSLMTAAVFLTLNSIKVLKLSTIMTA----WAKTPALSAMLMLTL 248
Cdd:COG1008 301 RLIAYSSVSHMGFVlLGIFALNPlglQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADlgglAKRMPVLAALFLLAA 380
|
250
....*....|....*....
gi 1079485365 249 LSLAGLPPLTGFLPKWLVI 267
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVL 399
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-282 |
1.51e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.80 E-value: 1.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 50 PRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQ-WDITQL-THPLSC-------LILTTAIAMKLGLAPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 120 QGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTL---TLMAILSAAM---GGWMGLNQTQIRKIMAFSSISHLGWMA-A 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLyfaPVLAALGVIAiiyGALIALAQTDIKRLIAYSSISHMGFVLlG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 193 IMVYNP---KLALLNFYLYSLMTAAVFLTLNSI----KVLKLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNElgiSGAVFQMISHGLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250
....*....|....*..
gi 1079485365 266 VIQELTKQNMAPMATAI 282
Cdd:TIGR01972 392 ILLGSFKVNPVVAFLAA 408
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-282 |
3.16e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 54.89 E-value: 3.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 33 LEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFS---------SMNNAwytgqwDITQLTHPLSCL-----IL 98
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvgllygvtgTLNMA------DLAGALAENPTVvtafgFV 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 99 TTAIAMKLGLAPFHFWFPEVLQG-SSLTTGLLLSTAMKLP--PMTLLY--------MTSQSLDSTTLTLmAILSAAMGGW 167
Cdd:PRK08375 209 LLALALKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyALIRIYftvfggdfRFALGLGWLLAVL-ALLSMLVGSL 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 168 MGLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLN--FYL--YSLMTAAVFLTLNSIKVLKLSTIMTAWA----KTPA 239
Cdd:PRK08375 288 AALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIEVTYGTRRLSELSglgrRMPL 367
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1079485365 240 LSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMATAI 282
Cdd:PRK08375 368 TAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVL 410
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
4.08e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.93 E-value: 4.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 96 LILTTAIAmKLGLAPFHFWFPEVLQGSSLTTGLLLSTAM---------KLPPMtllYMTSQSLDSTTLTLmAILSAAMGG 166
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLVL-GLATMLLGG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 167 WMGLNQTQIRKIMAFSSISHLGWMAAIMVY-NPKLALLNFYL---YSLMTAAVFLTLNSIK-------VLKLSTImtaWA 235
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAMllaHALFKAALFLVVGIIDhstgtrdIRKLSGL---GR 359
|
170 180
....*....|....*....|....*...
gi 1079485365 236 KTPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 360 RQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
13-268 |
5.08e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 54.17 E-value: 5.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 13 LMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSS----------MNNAWYTG 82
Cdd:PRK06458 117 FLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAI 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 83 QW-DITQLTHPLSCLILTTAIAM-------KLGLAPFHFWFPEVLQG-----SSLTTGLLLSTAMkLPPMTLLYMTSQSL 149
Cdd:PRK06458 197 LWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEapspvSALLSGVLLNVAL-YAVLRYYILIDAAI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 150 DS----TTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMA-AIMVYNP---KLALLNFYLYSLMTAAVFLTLNS 221
Cdd:PRK06458 276 GSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAfALGIGGPlgiFAALLHMLNHSLTKSAIFFASGN 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1079485365 222 IKVLK----LSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQ 268
Cdd:PRK06458 356 VLQKYgtrdINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-268 |
6.26e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.80 E-value: 6.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 53 IEAATKYFLIQAAASTLVL---------FSSMNNAWYTGQWDITQLTHPLSCL--ILTTAIAMKLGLAPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATLTTIalLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 122 SSLTTGLLLSTAMK-------LPPMTLLYMTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIM 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 195 VYNPKLALLN--FYLYSLMT--AAVFLTLNSIKVL----KLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLV 266
Cdd:PRK12663 316 ALGTPAGINGaiFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
..
gi 1079485365 267 IQ 268
Cdd:PRK12663 396 VQ 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-274 |
1.06e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 53.28 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 2 NPQAKLIFVLSLMLGTTITMSSNHWVMaWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTL-------VLFSS 74
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLlflpaviLIYTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 75 MNNAWYTGQWDITQLTHPLSCLILTTAIAmKLGLAPFHFWFPEVLQGSSLTTGLLLSTA---------MKLPPMT--LLY 143
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIA-KTAIFPVHSWLPAAMVAHYPVSALLHAVIvvktglfciYKILLYIfgLSY 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 144 MTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGW--MAAIMVYNPKLALLNFYL--YSLMTAAVFLTL 219
Cdd:PRK06589 273 LQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSM 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1079485365 220 NSIKVLK----LSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQN 274
Cdd:PRK06589 353 GSIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQN 411
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
2.30e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 52.74 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 98 LTTAIAMKLGLA--------PFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTT-----LTLMAILSAAM 164
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAvwnwlLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 165 GGWMGLNQTQIRKIMAFSSISHLGWM-AAIMVYNP---KLALLNFYLYSLMTAAVFLTLNSIK----VLKLSTIMTAWAK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIvATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 1079485365 237 TPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
3.55e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 51.64 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 55 AATKYFLIQAAASTLVLFSSMNNAWYTGQWDI---TQLTHPLSC---LILTTAI----AMKLGLAPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdydAISTQNLSLntqLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 125 TTGLLLSTAM-KLPPMTLLYMTSQ------SLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYN 197
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 198 PKLALL----NFYLYSLMTAAVFLTLNSIK-------VLKLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLV 266
Cdd:PRK07363 318 TQLSLLgavaQMISHGLILALLFHLVGIVErkvgtrdLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 1079485365 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
93-268 |
6.43e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 50.85 E-value: 6.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 93 LSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAI-----LSAAMGGW 167
Cdd:MTH00020 211 LICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFFAAT 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 168 MGLNQTQIRKIMAFSSISHLGWMA-AIMVYNPKLALLNFYLYSLMTAAVFLTLNSI--------KVLKLSTIMTAwakTP 238
Cdd:MTH00020 291 VGLVQNDLKKVIAYSTCSQLGYMVvACGLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LP 367
|
170 180 190
....*....|....*....|....*....|
gi 1079485365 239 ALSAMLMLTLLSLAGLPPLTGFLPKWLVIQ 268
Cdd:MTH00020 368 LTYIFFLIGSLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.10e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 49.95 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 33 LEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDITQLTH--PLSCLILTTAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 111 FHFWFPEVLQGSSLTTGLLLSTAMK----LPPMTLLYMTSQSLDstTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 187 LGWMAAIMVYNPKLALLnfylYSLMTAAVFL---TLNSIKVLKLSTIMTAWAKTPALSamlmLTLLSLAGLPPLTGFLPK 263
Cdd:PRK07234 281 LGFILAAPLVGGLYALA----HGLVKSTLFLcagALPSRNFTELISQMLGIGKWIPLT----MASFSIAGFPLLAGFVSK 352
|
....*...
gi 1079485365 264 WLVIQELT 271
Cdd:PRK07234 353 VLTLKNLL 360
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-282 |
1.20e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 50.30 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 110 PFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDST-----TLTLMAILSAAMGGWMGLNQTQIRKIMAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 185 SHLGWMAAIMVYNPKLALLNFYLY----SLMTAAVFLTLNSIK-------VLKLSTIMTAWAKTPALSAmlmLTLLSLAG 253
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgtrdITKLGGLRRAMPITAAAAL---LAALSMAG 369
|
170 180
....*....|....*....|....*....
gi 1079485365 254 LPPLTGFLPKWLVIQELTKQNMAPMATAI 282
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTV 398
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
1.51e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 49.76 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 82 GQWDITQLTH----PLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLL-----YMTSQSLDST 152
Cdd:MTH00207 165 GHWSITNMWQtdmnNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 153 TLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLG-WMAAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIKVL-----K 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHShhhsqD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1079485365 227 LSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-343 |
1.77e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.57 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 105 KLGLapfHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAI-----LSAAMGGWMGLNQTQIRKIM 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgaLTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 180 AFSSISHLGWMAAIMVY--NPKLALLNFYLYSLMTAAVFLTLNSI---------KVLKLSTIMTAwakTPALSAMLMLTL 248
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLIGS 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 249 LSLAGLPPLTGFLPKWLVIqELTK--QNMA-PMATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWhtnkpVNTWV 325
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLIL-ELTYsgRNMGiPFGSSLLKIQGDIGIKKDDRGSIGGPEGYPSRGSAFAFW-----LGTVA 468
|
250
....*....|....*....
gi 1079485365 326 AILTA-TSIMLLPISPMIA 343
Cdd:MTH00032 469 ALLTAfYSIRLVYITFIIS 487
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
4.13e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 48.16 E-value: 4.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 55 AATKYFLIQAAASTLVLFSSMNNAWYTG--QWDITQL---THPLSCLILTTA-----IAMKLGLAPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 124 LTTGLLLSTAMKLPPMTLL------YMTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWM----AAI 193
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYIllaaAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 194 MVYNPKLALLNFYLYSLMTAAVFLTL-------NSIKVLKLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLV 266
Cdd:PRK06473 318 TPLSILAAVFQMISHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-274 |
4.53e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.19 E-value: 4.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 33 LEINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFS-----------SMNNAWYTGQWDITQLTHPLSCLILTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 102 IAMKLGLAPFHFWFPEVLQGS-SLTTGLLLSTAMKLppMTLLYMT------SQSLDSTTLTL------MAILSAAMGGWM 168
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKV--MIYLIIRivydvfKANFVFTTLPFnnvfmiLAALAIVFGSVL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 169 GLNQTQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLY----SLMTAAVFLTLNSIK----VLKLSTIMTAWAKTPAL 240
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKI 376
|
250 260 270
....*....|....*....|....*....|....
gi 1079485365 241 SAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQN 274
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSN 410
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
148-270 |
6.01e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 47.84 E-value: 6.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 148 SLDSTTLTLMAILSAA---MGGWMGLNQTQIRKIMAFSSISHLGWM-AAIMVYNPKLALLNFYLYSLMTAAVFLTLNSIk 223
Cdd:COG1009 269 ALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVSQLGYMfLALGVGAYVAALFHLLTHAFFKALLFLGAGSV- 347
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1079485365 224 vlklstIMTA-----------WAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQEL 270
Cdd:COG1009 348 ------IHATgtrdirkmgglRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.02e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 46.36 E-value: 2.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 48 HHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDITQLTHPLSC--------LILTTAIAMKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 114 WFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLM-----AILSAAMGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFIlvsgtGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 189 WMAAIMVYNPK------LALLNFYL--YSLMTAAVFLTLNSI-------KVLKLSTIMTAWAKTPALSAmlmLTLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVaheaatrDIRKLGGLRKEMPITFIVAS---IAALAMAG 392
|
250
....*....|
gi 1079485365 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
2.64e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.90 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 13 LMLGTTITMSSNHWVMAWTGLEINTLAILPMISKSHHPRAIEAATKYFLIQAAA------STLVLFSSMNNAWYTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 87 TQLTHP----------LSCLILTTAIAMKLGLAPFHFWFPEV-LQGSSLTTGLLLSTAMKLPPMTLLYMTS-------QS 148
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 149 LDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWM-AAIMVYNPKL---ALLNFYLYSLMTAAVFLTLNSIKV 224
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMlLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAGILHR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1079485365 225 LKLST----IMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQEL 270
Cdd:PRK08676 351 QYRSDrfdrIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.29e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.58 E-value: 3.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 50 PRAIEAATKYFLIQAAASTLVLFSSM----NNAWYTGQWDITQL-THPLSC-------LILTTAIAMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLlNLPLPPgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 118 VLQ-----GSSLTTGLLLSTA------MKLPpmtLLYMTSQSLdsttLTLMAILSAAM---GGWMGLNQTQIRKIMAFSS 183
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGaygllrFSLP---LFPDASHEF----APIIITLGVIAiiyGALVALAQTDIKKLIAYSS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 184 ISHLGW-MAAIMVYNPK-LALLNFYLYS--LMTAAVFLTLNSIkVLKLSTIMTA-----WAKTPALSAMLMLTLLSLAGL 254
Cdd:PRK05846 310 ISHMGFvTLGIFAGNQLgIQGAIFQMIShgLSSAALFLLVGVL-YDRLHTRDIAdygglAKVMPVLAAFFLFFAMASLGL 388
|
250
....*....|...
gi 1079485365 255 PPLTGFLPKWLVI 267
Cdd:PRK05846 389 PGTSGFVGEFLIL 401
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
3.68e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 40.70 E-value: 3.68e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1079485365 295 RLAYCATITLPPHTTNHMKRWHTNKPVNTW-VAILTATSIMLLPISP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
81-270 |
5.37e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.11 E-value: 5.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 81 TGQWDITQLTHP-----LSCLILTTAIAMKLGLAPFHFWFPEVLQG-----SSLTTGLLLSTAMKLPPMTLLYMTSQSLD 150
Cdd:PRK08667 189 TGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSGVMLKVAVYGLVRFLMDVLSPELW 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 151 STTLTLMA-ILSAAMGGWMGLNQTQIRKIMAFSSISHLGW-MAAIMVY-------NPKLALLNfylyslMTAAVFLTLNS 221
Cdd:PRK08667 269 WGVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIGLYvifgvygLDTLALLA------LGGALFHSLNH 342
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1079485365 222 iKVLKLSTIMTAWA------------------KTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQEL 270
Cdd:PRK08667 343 -ALFKSLLFLTAGSvvhatgtrniekmgglvkLMPYTSALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-279 |
9.24e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 9.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 34 EINTLAILPMISKSHHPRAIEAATKYFLIQAAASTLVLFSSMNNAWYTGQWDITQ-----LTHPLSCLILTTAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 109 A------PFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTL------LYMTSQSLDSTTLTLMAILSAAM--GGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIALSVLAMvfGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 175 IRKIMAFSSISHLGWMAAIMVYNPKLAL-------LNFYLYslmTAAVFLTLNSI----KVLKLSTIMTAWAKTPALSAM 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIY---KSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFM 366
|
250 260 270
....*....|....*....|....*....|....*.
gi 1079485365 244 LMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPMA 279
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELA 402
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
1.16e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.01 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 15 LGTTITMSSNHWVM---AWTGLEINTLAILPMISKSHHPRAIeaatkyFLIQAAASTLVLFSSMNNAWY-TGQWDITQLT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 91 HPLSCLILTTAIAMKLGLAPFHF--WFPEVLQGSSLTTGLLLSTAMKLPPM-TLLYMTSQSLDSTT----LTLMAI--LS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVyGILKMTILTQTIPIgyfgLTILAIgaFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 162 AAMGGWMGLNQTQIRKIMAFSSISHLGWMAA-----IMVYNPKLALLNFYLYSLMTAAVFLTLN------SIKVLKLSTI 230
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVAktglflSSGLQEKQSI 316
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1079485365 231 MTAWAKTPALSAM-LMLTLLSLAGLPPLTGFLPKWLVIQEL 270
Cdd:PRK06459 317 TYSKKIRNRWIELgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-267 |
1.31e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 43.79 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 69 LVLFSSMNNAWYTGQWDITQLTHPLSCLILTTAIAMKLGLAPFHFWFPEVLQGSSLTTGLLLSTAM---------KLPPM 139
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMvvagvflliRLSPL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 140 TLLYMTSQSLdsttLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMA-AIMVYNPKLALLNFYLYSLMTAAVFLT 218
Cdd:MTH00211 261 FQNNQLILGA----VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMvTLGLNQPQLAFLHICTHAFFKAMLFMC 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1079485365 219 LNSI-------------KVLKLSTIMTawaktpalSAMLMLTLLSLAGLPPLTGFLPKWLVI 267
Cdd:MTH00211 337 SGSIihglnneqdirkmGGLSKNLPFT--------SSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-260 |
2.02e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.10 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 55 AATKYFLIQAAASTLVLFSSMNNAWYTGQ--WDITQLTH---PLSCLILT-----TAIAMKLGLAPFHFWFPEV-----L 119
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAhgeasA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 120 QGSSLTTGLLLstamKLPPMTLLYMTSQSLDSTTLTLMAILSA------AMGGWMGLNQTQIRKIMAFSSISHLGW---- 189
Cdd:PRK12561 218 PVSMILAGVLL----KMGGYALIRFNVQMLPDAHVYFAPALAIlgvvniIYGALNAFAQDNVKRRLAYSSVSHMGFvllg 293
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1079485365 190 MAAIMVYNPKLALLNFYLYSLMTAAVFLT-------LNSIKVLKLSTIMTAWAKTPALsaMLMLTLLSLAgLPPLTGF 260
Cdd:PRK12561 294 IAAFTDLGISGAMLQMISHGLIAAALFFLtgvtyerTHTLSIPNMGGLAKVMPKTFAL--FTASSMASLA-LPGMSGF 368
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
143-278 |
2.34e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 42.71 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 143 YMTSQSLDSTTLTLMAILSAAMGGWMGLNQTQIRKIMAFSSISHLGWMAAIMVYN-PKLALLNFYLYSLMTAAVFLTLNS 221
Cdd:MTH00209 231 SLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAGN 310
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1079485365 222 I-----KVLKLSTIMTAWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAPM 278
Cdd:MTH00209 311 IihshgHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIM 372
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
3.87e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 42.27 E-value: 3.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 33 LEINTLAILPMISKSHHPRAIEAATKYFLIQAAAS------TLVLFSSMNNAWYTGQWDITQLTHPLSCLILTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 107 GLAPFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTT------LTLMAILSAAMGGWMGLNQTQIRKIMA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPhvigyvGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 181 FSSISHLGWM---AAIMVYNPKLALLN--FYLYS---------LMTAAVFLTLNSIKVLKLSTIMTawaKTPALSAMLML 246
Cdd:PRK06525 302 YSTITQLGYMffgLSLAILGSRLALEGsiAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVLK---KLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 1079485365 247 TLLSLAGLPPLTGFLPKWLVI 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
1.43e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 40.32 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 103 AMKLGLAPFHFWFPEVLQG-----SSLTTGLL----LSTAMKLppMTLLYMTSQSLDSTTLTLMAILSAAMGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 174 QIRKIMAFSSISHLGWMAAIMVYNPKLALLN--FYLYSLM--TAAVFLTLNS-IKVLKLSTI--MTAWAKT-PALSAMLM 245
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGaiYYLIHDMivKAALFLLIGImIKITGTTDLkkMGGLIKRyPVLGWMFF 377
|
170 180
....*....|....*....|...
gi 1079485365 246 LTLLSLAGLPPLTGFLPKWLVIQ 268
Cdd:PRK07691 378 IAALSLAGIPPLSGFYGKFFIVE 400
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-266 |
1.44e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 40.34 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 111 FHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDSTTLTLMAIL-----SAAMGGWMGLNQTQIRKIMAFSSIS 185
Cdd:MTH00208 255 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLilgslTALFAASTAISQHDIKKIIAYSTTS 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 186 HLGWMA-AIMVYNPKLALLNFYLYSLMTAAVFLTLNSI-----------KVLKLSTIMtawaktPALSAMLMLTLLSLAG 253
Cdd:MTH00208 335 QLGLMVvAIGLNQPNLALFHICTHAFFKAMLFLCSGSIihslnneqdlrKMGGLSFLL------PVTSSCIILGSLALMG 408
|
170
....*....|...
gi 1079485365 254 LPPLTGFLPKWLV 266
Cdd:MTH00208 409 TPFLAGFYSKDLI 421
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-277 |
1.45e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.51 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 110 PFHFWFPEVLQGSSLTTGLLLSTAMKLPPMTLLYMTSQSLDST-----TLTLMAILSAAMGGWMGLNQTQIRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 185 SHLGwMAAIMV-------YNPKLALLNFYLYSLMtAAVFLTLNSiKVLKLSTIMTAW-----AKT-------------PA 239
Cdd:PRK12646 308 SQLG-MIMAMVgigggyaQHQQDAIASIYVFVLF-AALFHLMNH-AIFKCALFMGVGiidheAGTrdirilsgmrqlfPK 384
|
170 180 190
....*....|....*....|....*....|....*...
gi 1079485365 240 LSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTKQNMAP 277
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLS 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-278 |
1.84e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.90 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 101 AIAMKLGLAPFHFWFPEV-----LQGSSLTTGLLLST---AMKLPPMTLLYMTSQSLdSTTLTLMAILSAAMGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggyGLVRLSWPILPLGAQNL-APAVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 173 TQIRKIMAFSSISHLGWMAAIMVYNPKLALLNFYLYSL---MTAAVFLTLNSIKVLKLSTIMTAWAK-----TPALSAML 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180 190
....*....|....*....|....*....|....
gi 1079485365 245 MLTLLSLAGLPPLTGFLPKWLVIqeLTKQNMAPM 278
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI--LSSFNWNPI 429
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
2.16e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.81 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 107 GLAPFHFWFPEVLQGSSLTTGLLLSTA-MKlppMTLLYMTSQSLDS--------TTLTLMAILSAAMGGWMGLNQTQIRK 177
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMK---IGLLGILTLSLLGgnaplwwgVALLVLGMITAFVGGLYALMEHNIQR 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485365 178 IMAFSSISHLG--------WMAAIMVYNPKLALLNFY--LY-----SLMTAAVFLTLNSI-------KVLKLSTImtaWA 235
Cdd:PRK08042 272 LLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYhllnhSLFKSVLFLGAGSVwfrtghrDIEKLGGI---GK 348
|
170 180 190
....*....|....*....|....*....|....*..
gi 1079485365 236 KTPALSAMLMLTLLSLAGLPPLTGFLPKWLVIQELTK 272
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| |
