|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 673.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFLTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 938340536 401 TLITASYSLYMFLLTQRGPLPSHLISLDPSHSREHLLLTLHLLPLLLLILKPELVWGWT 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 664.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETgWSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFLTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430
....*....|....*....|....*....|...
gi 938340536 401 TLITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTR 432
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 663.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGwSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFLTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430
....*....|....*....|....*....|...
gi 938340536 401 TLITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTR 432
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 650.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGWSFlSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNF-SLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFLTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|...
gi 938340536 401 TLITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTR 432
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 539.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 3 KILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 83 NHLKMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 163 VALLVYQSSAGTLSFLTLPHLphiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFS---KLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 243 GMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 323 TSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|.
gi 938340536 403 ITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTR 428
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-433 |
5.01e-169 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 483.32 E-value: 5.01e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFLTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILD-PLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....
gi 938340536 400 GTLITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSR 434
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
2.37e-128 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 379.11 E-value: 2.37e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFtpkKHLWSstLLYSLIIAVASLLWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFL---KNSWW--LVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEptNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFltlphlPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSF------FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|...
gi 938340536 401 TLITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVR 420
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-433 |
3.02e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 370.32 E-value: 3.02e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 49 GWSFLSPYMASDPLSTPLLVLTCWLLPLMVLASQNHLKMepTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 129 PTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPHIQLHTWadkLWWAACLLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 209 PLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 289 YSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938340536 369 ALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLITASYSLYMFLLTQRGPLPSHLISLDPSHSR 433
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSS 391
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-427 |
9.78e-118 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 352.12 E-value: 9.78e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTpKKHLWSSTLLYSLIIAVASLLWLAAPSeTGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEptNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 161 LLVALLVYQSSAGTLSFLTLPHLPHIQLHTwadKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 241 GYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420
....*....|....*....|....*..
gi 938340536 401 TLITASYSLYMFLLTQRGPLPSHLISL 427
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPL 420
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-418 |
3.43e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 343.11 E-value: 3.43e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 8 TIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSeTGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLASQNHLKM 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSF-LMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 88 EPTNRQraYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLV 167
Cdd:MTH00205 84 NKNSKL--FTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 168 YQSSAGTLSFLTLPHLPHIQLHTWadkLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRV 247
Cdd:MTH00205 162 LNSLNFSLSMFFNFPLNFSDFYLF---LYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 248 LIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSAL 327
Cdd:MTH00205 239 TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 328 FCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLITASY 407
Cdd:MTH00205 319 FALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAY 398
|
410
....*....|.
gi 938340536 408 SLYMFLLTQRG 418
Cdd:MTH00205 399 SLYLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-427 |
4.11e-95 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 295.45 E-value: 4.11e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 4 ILAPTIFLFVsTWFTPKKHLWSS---TLLYSLIIAVASLLWLAA--PSETGWSF-----------LSPYMASDPLSTPLL 67
Cdd:COG1008 10 ILLPLLGALL-LLLLPRRNARLArwvALAVSLLTLLLSLYLLAGfdPGTGGFQFvesypwipslgISYHLGVDGISLPLV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 68 VLTCWLLPLMVLASQNhlkmEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAG 147
Cdd:COG1008 89 LLTALLTPLAILASWN----EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 148 TYFLFYTLAGSLPLLVALLVYQSSAGTLSFLtLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIA 227
Cdd:COG1008 164 IKFFLYTLAGSLLMLVAILALYFLAGALTFD-IAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 228 GSMVLAAVLLKLGGYGMMRVLIILDPL-TKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQT 306
Cdd:COG1008 243 GSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALN 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 307 PWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSL 386
Cdd:COG1008 323 PLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGA 402
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 938340536 387 FNWSMWTLILTGLGTLITASYSLYMFLLTQRGPLPSHLISL 427
Cdd:COG1008 403 FQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-427 |
2.69e-88 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 277.85 E-value: 2.69e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 4 ILAPTIFLFVsTWFTPKK----HLWSSTLLYSLIIAVASLLWLA-APSETGWSF-----------LSPYMASDPLSTPLL 67
Cdd:PRK05846 10 IFLPLIGGLL-VLLTERFgarlARWIALIGTLLTLLLSLVLWIGfDSSNAGFQFvekhpwiprfgISYHLGVDGISLLLV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 68 VLTCWLLPLMVLASQNhlkmEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAG 147
Cdd:PRK05846 89 VLTALLTPLAVLASWE----EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGK-NRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 148 TYFLFYTLAGSLPLLVALL----VYQSSAGTLSFLTLPHLPhiqLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVE 223
Cdd:PRK05846 164 TKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLP---LPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 224 APIAGSMVLAAVLLKLGGYGMMRVLIILDPL-TKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGI 302
Cdd:PRK05846 241 APTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 303 LIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMI 382
Cdd:PRK05846 321 FAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 938340536 383 ITSLFNWSMWTLILTGLGTLITASYSLYMFLLTQRGPLPSHLISL 427
Cdd:PRK05846 401 LLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKL 445
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
30-412 |
1.06e-81 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 260.26 E-value: 1.06e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 30 YSLIIAVASLLWLAA------PSETGWSF-----------LSPYMASDPLSTPLLVLTCWLLPLMVLASqnhlKMEPTNR 92
Cdd:TIGR01972 29 IALVVALATLLLSLLllfqfdPTGSGFQFtedipwipalgISYHLGVDGISLLLVLLTALLTLLAILAS----WESIQKR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 93 QRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAGTYFLFYTLAGSLPLLVALLVYQSSA 172
Cdd:TIGR01972 105 VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLG 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 173 GtLSFlTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILD 252
Cdd:TIGR01972 184 G-GTF-DLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 253 P-LTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLA 331
Cdd:TIGR01972 262 PdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLV 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 332 NTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLITASYSLYM 411
Cdd:TIGR01972 342 GVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTL 421
|
.
gi 938340536 412 F 412
Cdd:TIGR01972 422 Y 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-412 |
7.55e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 239.96 E-value: 7.55e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 56 YMASDPLSTPLLVLTCWLLPLMVLASQNHLKMeptnRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIIT 135
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 136 RWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHlphIQLHTWADKLWWAACLLAFLVKMPLYGAHL 215
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLN---IKLPLSIQKWLLVGFFLSLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFII-LALWGVIMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 295 MGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLP 374
Cdd:MTH00204 311 MGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSC 390
|
330 340 350
....*....|....*....|....*....|....*...
gi 938340536 375 NLMGELMIITSLFNWSMWTLILTGLGTLITASYSLYMF 412
Cdd:MTH00204 391 NFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-412 |
7.75e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 234.95 E-value: 7.75e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVS-TWFTPKKH---LWSSTLLYSLIIAVASLLWLAAPSETG---------W------SFLSPYMASDP 61
Cdd:MTH00217 1 MLELVFILPLIGILhLLIIPRDNivrLKKIALEWSLLTLTATILLWASFDGEGqfqaikkfeWipgiepVFGPVVFAVDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 62 LSTPLLVLTCWLLPLMVLASQNHLKMeptnRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQM 141
Cdd:MTH00217 81 ISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSRE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 142 ERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLphiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAH 221
Cdd:MTH00217 157 EKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCL---KIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAH 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 222 VEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFI-ILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAA 300
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 301 GILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGEL 380
Cdd:MTH00217 314 GIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEF 393
|
410 420 430
....*....|....*....|....*....|..
gi 938340536 381 MIITSLFNWSMWTLILTGLGTLITASYSLYMF 412
Cdd:MTH00217 394 LSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
6.49e-69 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 221.03 E-value: 6.49e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 113 ATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPHIQLHTWA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 193 DKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFIILALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 273 TGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMLLARGLQT 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 938340536 352 VLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
1.23e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 216.71 E-value: 1.23e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 58 ASDPLSTPLLVLTCWLLPLMVLASQNHLKMeptnRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRW 137
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 138 GNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTL---PHLPHIQLHTWAdklwWAACLLAFLVKMPLYGAH 214
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascSHVVSEQTQKWI----FLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFII-LALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 294 HMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 938340536 374 PNLMGELMIITSLFNWSMWTLILTGLGTLITASYSLY 410
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-428 |
9.63e-53 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 184.85 E-value: 9.63e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 57 MASDPLSTPLLVLTCWLLPLMVLASQNhlkmePTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 137 WGNQmERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFlTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLW 216
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTF-DLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPfiILALWGV--IMTGSIC-LRQTDLKSLIAYSSVS 293
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAP--ALAILGVvnIIYGALNaFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 294 HMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPL 373
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGM 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938340536 374 PNLMGELMI---ITSLFNWS----MWTLILTGLGTLITASYSLYM----FLLTQRGPLPSHLISLD 428
Cdd:PRK12561 366 SGFVSELTVflgITSSDVYSstfrTITILLAAVGLILTPIYLLSMlrrvFYGPRSELLPALAVVED 431
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-416 |
2.49e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 171.10 E-value: 2.49e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 60 DPLSTPLLVLTCWLLPLMVLASQNHLKMEPtnRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGN 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 140 QmERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPHiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPK 219
Cdd:COG0651 153 K-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 220 AHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDP--LTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGL 297
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 298 VAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLM 377
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 938340536 378 GELMIITSLFNWSMWTLILTGL-GTLITASYSLYMFLLTQ 416
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
1.27e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 168.55 E-value: 1.27e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 99 LLISLQIFLIMAFSATE-VIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPllvALLVYQSSAGTLSF 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFP---FLFVYLKNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 178 LTLPHLPHIQLhtwadklwWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLtke 257
Cdd:MTH00094 143 CYFDFFLSWEM--------FFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 258 LSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938340536 338 THSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLITASYSLY 410
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
4.13e-44 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 161.27 E-value: 4.13e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 60 DPLSTPLLVLTCWLLPLMVLASQnhlkmePTNRQ-RAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWG 138
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 139 NQmERLNAGTYFLFYTLAGSLPLLVALL---VYQSSAGTLSFLTLPHLPH-IQLhtwaDKLWWAACLLAFLVKMPLYGAH 214
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLgmgLYGSNEPTLNFETLANQSYpVAL----EILFYIGFLIAYAVKLPIIPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPF-IILALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:CHL00011 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAYSSVS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 294 HMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERThsRTMLLAR--GLQTVLPLMATWWFIASLANLALP 371
Cdd:CHL00011 312 HMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 938340536 372 PLPNLMGELM----IITS---LFNWSMWTLILTGLGTLITASYSLYM 411
Cdd:CHL00011 390 GMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
30-426 |
4.63e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 161.80 E-value: 4.63e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 30 YSLIIAVASLLWLAAPSETGWSFLSPYM------------------ASDPLSTPLLVLTCWLLPLMVLASqnhlkMEPTN 91
Cdd:PRK02546 38 YALIVGLIDFLITVYAFYTGYDFSNPGLqlvesyswlpqlgltwsvGADGLSMPLILLTGFITTLAVLAA-----WPVTF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 92 RQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAGTYFLFYTLAGSLPLLVALLVYQSS 171
Cdd:PRK02546 113 KPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFY 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 172 AGTLSFlTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIIL 251
Cdd:PRK02546 192 GDTPTF-DMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGM 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 252 DPLTKELSYP-FIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCL 330
Cdd:PRK02546 271 LPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 331 ANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTL-------ILTGLGTLI 403
Cdd:PRK02546 351 VGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLpfrvvvvFLAAVGVIL 430
|
410 420
....*....|....*....|...
gi 938340536 404 TASYSLYMFLLTQRGPLPSHLIS 426
Cdd:PRK02546 431 TPIYLLSMLREIFFGPENKELVS 453
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
17-429 |
2.05e-39 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 148.69 E-value: 2.05e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 17 FTPKKHLWSSTLLYSLIIAVASLLWLAA------PSETGWSF-----------LSPYMASDPLSTPLLVLTCWLLPLMVL 79
Cdd:PRK06473 18 FWPSGINGKLARSVALVIASVLLLLSLVlafqfdPGNPNQQFtefipwidslgLSYHLGVDGLSLPLLVLNSLLTLIAIY 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 80 ASQnhlkmEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAGTYFLFYTLAGSL 159
Cdd:PRK06473 98 SSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGI 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 160 PLLVALLVYQSSAGTLSFLTLPHLPHiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKL 239
Cdd:PRK06473 172 LILVSFLGLVWLSGASSFDYEPLRSH-TLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 240 GGYGMMRVLIILDPLTKELSYPFiiLALWGVI--MTGSIC-LRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALIL 316
Cdd:PRK06473 251 GTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQ 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 317 MIAHGLTSSALFCLANTNYERTHSRTMLLARGL---QTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWT 393
Cdd:PRK06473 329 MISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQ 408
|
410 420 430
....*....|....*....|....*....|....*.
gi 938340536 394 LILTGLGTLITASYSLYMFLLTQRGPLPSHLISLDP 429
Cdd:PRK06473 409 TLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
8.67e-31 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 114.54 E-value: 8.67e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPLMVLA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 938340536 81 SQNHLKMEPTNRQRAYISLLISLQIFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-426 |
3.36e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 116.99 E-value: 3.36e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 60 DPLSTPLLVLTCWLLPLMVLASQNHLKMEPTNRQraYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEW--YYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 140 QMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPHIQLHT----------WADKLWWAACLLAFLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 210 LYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVL-------IILDPLTKELSYPFIILALWGVIMTGSICLRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 283 LKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFI 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938340536 363 ASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGL-GTLITASYSLYMFLLTQRGPLPSHLIS 426
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLiASAISLVGYFRAWYSLFFGKPKSGEEV 463
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
19-424 |
1.57e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 114.81 E-value: 1.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 19 PKKHLWSSTLLYSLIIAVAS--LLWLAAPSETGWSF-----------LSPYMASDPLSTPLLVLTCWLLPLMVLASQnhl 85
Cdd:PRK07363 24 PSARLRQITLVFAVLVLAWSlfLLTQFDLSDPGMQFqeylpwneplgLSYSLGVDGLSLPLLVLNSLLTWIAIYSIG--- 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 86 kmEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAGTYFLFYTLAGSLPLLVAL 165
Cdd:PRK07363 101 --ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAF 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 166 LVYQSSAGTLSFLTLPHLPHiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 245
Cdd:PRK07363 178 LGIVWLSGSTSFDYDAISTQ-NLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 246 RVLIILDPLTKELSYPfiILALWGVI--MTGS-ICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGL 322
Cdd:PRK07363 257 RFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 323 TSSALFCLANTNYERTHSRTMLLARGLQTV---LPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGL 399
Cdd:PRK07363 335 ILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIV 414
|
410 420
....*....|....*....|....*
gi 938340536 400 GTLITASYSLYMFLLTQRGPLPSHL 424
Cdd:PRK07363 415 ASGLTAVYFVILLNRTCFGRLDNKL 439
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-396 |
1.85e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 111.56 E-value: 1.85e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILD--PLTKELSYPFIILALWGVIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 279 RQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMAT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*...
gi 938340536 359 WWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLIL 396
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-407 |
1.27e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 109.20 E-value: 1.27e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 91 NRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQmERLNAGTYFLFYTLAGSLPLLVAL-LVYQ 169
Cdd:PRK08375 103 HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVgLLYG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 170 SsAGTLSFLTLPH-LPHIQLHTWAdklwWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVL 248
Cdd:PRK08375 182 V-TGTLNMADLAGaLAENPTVVTA----FGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIY 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 249 I----ILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTS 324
Cdd:PRK08375 257 FtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 325 SALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFN-WSMWTLILTGLGTLI 403
Cdd:PRK08375 337 GALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLL 416
|
....
gi 938340536 404 TASY 407
Cdd:PRK08375 417 ALLY 420
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-410 |
1.89e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 93.48 E-value: 1.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 90 TNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITrWGNQMERLNAGTYFLFYTLAGSLPLLV-ALLVY 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIgAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 169 QSSaGTLSFLTLphlphiqlhTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVL 248
Cdd:PRK07234 169 QAN-GTFAFSGL---------ATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 249 IILDPLTKELSYPFIILALWGVImtgsICLRQTDLKSLIAYSSVSHMGLVAAGILIqtpwgftgALILMIAHGLTSSALF 328
Cdd:PRK07234 239 LDVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLF 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 329 CLANTNYERTHSRTMLLARGLQTVLPLMatwwfIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLITASYS 408
Cdd:PRK07234 307 LCAGALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKF 381
|
..
gi 938340536 409 LY 410
Cdd:PRK07234 382 IF 383
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
9-387 |
9.92e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 92.10 E-value: 9.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 9 IFLFVSTWFTP----KKHLWSSTLLYSLIIAVASLLWLA--------APSETGWSFLSPY---MASDPLSTPLLVLTCWL 73
Cdd:PRK08667 10 ILLLLAAAVIPlvfrHKRKRVWQSVLWLVIAIALLLFAGslqlftgnPLDIPLWGIAPGLditFHIDRLAAFFIILIGLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 74 LPLMVLASQNHLKMEPTNRQRAYISLLISLQIF-LIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLF 152
Cdd:PRK08667 90 SLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 153 YTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPHIQlhtwadKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVL 232
Cdd:PRK08667 170 MTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL------SLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALM 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 233 AAVLLKLGGYGMMRVLiiLDPLTKELSYPFIIL------ALWGVIMTgsicLRQTDLKSLIAYSSVSHMGLVAAGILIQT 306
Cdd:PRK08667 244 SGVMLKVAVYGLVRFL--MDVLSPELWWGVLILlagsisALLGVIYA----LKEHDLKGLLAYSSIENIGIILMGIGLYV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 307 PWGFTG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPN 375
Cdd:PRK08667 318 IFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNG 397
|
410
....*....|..
gi 938340536 376 LMGELMIITSLF 387
Cdd:PRK08667 398 FASELLLYESFF 409
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-413 |
7.23e-18 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 85.55 E-value: 7.23e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 9 IFLFVSTWFTPKKHLWSSTLLYSLIIAVASLLWLAAPSETGwSFLSPYMASDPLSTPLLVLTCWLLPLMVLASQNHLKME 88
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTG-TAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 89 PTNRQRAYISLLISLQIFLIMAfSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGT-YFLFYTLAGSLPLLVALLV 167
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 168 YqSSAGTLSFLTLPHlpHIQLHTWADKLWWAACLL---AFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM 244
Cdd:COG1007 177 Y-GATGSLNLAGIAA--ALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 245 -MRVLII-LDPLTKELSYPFIILALwgVIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:COG1007 253 lLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAY 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALF-CLANTNYERTHSRTMLLARGLQTVLPLMAtWWFIASLANLA-LPPLPNLMGELMIITSLFNWSMWTLILTG 398
Cdd:COG1007 331 LFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIA 409
|
410 420
....*....|....*....|
gi 938340536 399 -LGTLITASYSL----YMFL 413
Cdd:COG1007 410 vLNSVISAYYYLrvvkAMYF 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-409 |
3.45e-16 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 81.24 E-value: 3.45e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 113 ATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTyfLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPhiqlhTWA 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHSD-----VWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 193 DKLWWAAcLLAFLVKMPLYGA------HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKeLSYPFIILA 266
Cdd:PRK12650 202 EKPGLTT-VVAVLIAVAAFTKsaqfpfHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWLLIIVG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 267 LWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLA 346
Cdd:PRK12650 280 MITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRL 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938340536 347 RGLQTVLPLMATWWFIASLANLALPPLPNL-----MGELMIITSLFNWSMWTLILT-GLGTLITASYSL 409
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPLFGFvskegMLTAFLEAPGGNAGVVLLLVGaALGAVFTFAYSA 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
73-386 |
4.66e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.43 E-value: 4.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 73 LLPLMVLASQNHLKMEPTNRQRAYISLLISLQIF-LIMAFSATEVIMFYVMFEATLIPTLIIITRwGNQMERLNAGTYFL 151
Cdd:PRK08668 76 MISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAgVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 152 FYTLAGSLPLLVALLVYQSSaGTLSFLTLphLPHIQLHTWADKLWWAACLL--AFLVKMPLYGAHLWLPKAHVEAPIAGS 229
Cdd:PRK08668 155 LSAIGAYAMLYAIFLIYAKT-GTFDFADI--SQGLINDTSTGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 230 MVLAAVLLKLGGYGMMRVLIILdPLTKELS------------YPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGL 297
Cdd:PRK08668 232 AVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvplfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 298 VAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLM 377
Cdd:PRK08668 311 ILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFA 390
|
....*....
gi 938340536 378 GELMIITSL 386
Cdd:PRK08668 391 SKWLIFEAL 399
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-414 |
4.76e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 80.18 E-value: 4.76e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFIILALwGVIMTGSIC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 278 LRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTNYERTHSRTMLLARGLQtvlP 354
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilHRQYRSDRFDRIFDVFRLQ---P 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 355 LMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWtLILTGLGTLITASYSLYMFLL 414
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVW-LVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
86-415 |
1.85e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.45 E-value: 1.85e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 86 KMEPTNRQRAYISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITrWGNQMERLNAGTYFLFYTLAGSLPLLVAL 165
Cdd:PRK12663 100 DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGI 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 166 LVYQSSAGTLSF----LTLPHLPHIQLHTWADKLWwaacLLAFLVKMPLYGAHlWLPKAHVEAPIAGSMVLAAVLLKLGG 241
Cdd:PRK12663 179 GLLYGTFGTLNMahiaMRLNDMGDTATLTTIALLF----LLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGI 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 242 YGMMRVLIILDPLTKELSYPFIILALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:PRK12663 254 YALIRVFTLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 321 GLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLG 400
Cdd:PRK12663 334 MVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLI 413
|
330
....*....|....*
gi 938340536 401 TLITASYSLYMFLLT 415
Cdd:PRK12663 414 TSLITMYSLFRIFFL 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
154-423 |
5.07e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 77.50 E-value: 5.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 154 TLAGSLPLLVALLVYQSSAGTLSFLTL-PHLPHIQLHTWAdklwWAACLLAFLVKM------PLygaHLWLPKAhVEAPI 226
Cdd:COG1009 171 TRVGDLGLLLGILLLGAIAGTLNFSELlAAAPTILSSPLL----TLILLLLLLGAFgksaqfPL---HFWLPDA-MEGPT 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 227 AGSMVL-AAVLLKLGGYGMMRVLIILDpLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQ 305
Cdd:COG1009 243 PVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 306 tpwGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITS 385
Cdd:COG1009 322 ---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEA 398
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 938340536 386 LF---NWSMWTLILTGLGTLITASYSLYMFLLT----QRGPLPSH 423
Cdd:COG1009 399 ALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPKH 443
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-402 |
9.52e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 76.50 E-value: 9.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 116 VIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPH-IQLHtwadK 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDvIREH----P 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 195 LWWAACLLAFL---VKMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRvliiLDPLTKELSYPFIILALWGV 270
Cdd:PRK12647 193 LYLAILLLVLGgafTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGG 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 271 ---IMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLAR 347
Cdd:PRK12647 268 ltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLG 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 938340536 348 GLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTL 402
Cdd:PRK12647 348 GLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
118-387 |
1.02e-14 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 76.47 E-value: 1.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 118 MFYVMFEA-TLIPTLIIITrwgNQMERLNAGTYFLFYTLA--GSLPLLVALLVYQSSAGTLSFLTLPHLPHIQLhtWADk 194
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIRRAGFLYLLMAhaGALAILLAFGLLARESGSYDFAAMRAAHLSPF--WAS- 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 195 lwwAACLLAFL---VKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPlTKELSYPFIILALWGVI 271
Cdd:PRK06521 211 ---LVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG-APGWWWGVLVLALGAIS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 272 MTGSI--CLRQTDLKSLIAYSSVSHMGLV-----------AAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERT 338
Cdd:PRK06521 287 AVLGVlyALAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHAT 366
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 938340536 339 HSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK06521 367 GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
2.72e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 75.00 E-value: 2.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 109 MAFSATEVIMFYVMFEATLIPTLIIITRwGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSF----LTLPHLP 184
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadlaVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 185 ---HIQLHtwadklwwAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPlTKELSYP 261
Cdd:PRK12665 205 sgtRTALF--------AVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 262 FIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK12665 276 LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSS 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938340536 342 TMLLARGLQTVLPLMATWWFIASLaNLA-LPPLPNLMGELMIITS-LFNWSMWTLILTGlGTLITASYSLY 410
Cdd:PRK12665 356 SLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
77-431 |
1.25e-13 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 73.25 E-value: 1.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 77 MVLASQNHLKMEPTNRQRAYISLLIsLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLA 156
Cdd:PRK12646 94 VFFYATQYLSSRKDNLPRFYFYLTL-FMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVF 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 157 GSLPLLVALLVYQSSAGTLSFLTLPHlphiQLHTWADKLWWAACLLAFLV----KMPLYGAHLWLPKAhVEAPIAGSMVL 232
Cdd:PRK12646 173 GGLALLVGFIMLYIMTGTNNITEILG----QADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 233 -AAVLLKLGGYGMMRVLIILDpLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAA-----GILIQT 306
Cdd:PRK12646 248 hSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQH 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 307 PWG---------FTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLM 377
Cdd:PRK12646 327 QQDaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFL 406
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938340536 378 GELMIITSLFNWS-------MWTLILTGLG---TLITASYSLYMFLLTQRGPLPSHLISLDPSH 431
Cdd:PRK12646 407 SKEMFLDALTQTGqlsqfslISMIIIVFIGviaSIFTFTYALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-407 |
2.99e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.34 E-value: 2.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 105 IFLIMAFSATEVIM------FYVMFEATLIpTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFL 178
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 179 TLPHLPHiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKEL 258
Cdd:PRK08377 192 HIAQLAG-TIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 259 SYP--FIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:PRK08377 271 SVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938340536 337 RTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWS-MWTLILTGLGTLITASY 407
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
60-402 |
3.89e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 71.16 E-value: 3.89e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 60 DPLSTPLL---VLTCWLLPL-----MVLASQNHLKMEPTNRQRAYISLLISLQIFLIMAfsaTEVIMFYVMFEATLIPTL 131
Cdd:PRK06525 74 DPVSVLIGfvvVLLGLLVTLystgyMSPGNREHPVHEGTGRYYAFLLLFIGAMAGLVYS---STLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 132 IIITRWGNQmERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPhlphiQLHTWADKLWWAACLLAFLVKMPLY 211
Cdd:PRK06525 151 ALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKSAQL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 212 GAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK06525 225 PFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 291 SVSHMGLVAAGILIQ---TPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLAN 367
Cdd:PRK06525 304 TITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAI 383
|
330 340 350
....*....|....*....|....*....|....*
gi 938340536 368 LALPPLPNLMGELMIITSLFNWSMWTLILTGLGTL 402
Cdd:PRK06525 384 TGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-407 |
1.13e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.74 E-value: 1.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 96 YISLLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFY-TLAGSLPLLVALLVYqssaGT 174
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVgSLASSMVLLGIALLY----GQ 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 175 LSFLTLPHLPH--IQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRVLIIL 251
Cdd:PRK08376 199 YGTLNMAYLAVkmSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 252 DPLT---KELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMG---------LVAAGILIQTPWGFT---GALIL 316
Cdd:PRK08376 277 YGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYH 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 317 MIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLIL 396
Cdd:PRK08376 357 IVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVI 436
|
330
....*....|..
gi 938340536 397 TGLGT-LITASY 407
Cdd:PRK08376 437 AMIGSvLTLASF 448
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
4.61e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 67.64 E-value: 4.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 97 ISLLISLqIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 177 FLtlphlphiQLHTWADKLWWAACLLA--FLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPL 254
Cdd:MTH00062 154 FS--------DWGSDDSVSLIVYYVLSfmFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 255 TKeLSYPFIILALWGVIMTGSicLRQTDLKSLIAYSSVSHMgLVAAGILIQTPWGFTG-ALILMIAHGLTSSALFCLANT 333
Cdd:MTH00062 226 SF-LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWC 301
|
250
....*....|..
gi 938340536 334 NYERTHSRTMLL 345
Cdd:MTH00062 302 FYEVSGSRNWVL 313
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-409 |
1.45e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 66.12 E-value: 1.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 1 MLKILAPTIFLFVSTWFTPKK---HLWSSTLLYSLIIAVASLLWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPLM 77
Cdd:TIGR01770 7 EIILLLGAFILLLYGLFYSRKkrnPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 78 VLASQNHLKMEPTNRQRAYISLLISLQIFLIMAfSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAG-TYFLFYTLA 156
Cdd:TIGR01770 87 FFFALSYLSKEKINKFEFYILLLFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGlKYFILGAFS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 157 GSLPLLVALLVYQSSaGTLSFLTLPHLPH-IQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAV 235
Cdd:TIGR01770 166 SGLLLFGISLIYGFT-GSLNFEDLLLFLSnGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 236 LLKLGGYGMMRVLI-ILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGAL 314
Cdd:TIGR01770 245 PKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 315 ILMIAHGLTSSALF-CLANT-NYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMW 392
Cdd:TIGR01770 325 FYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLY 404
|
410
....*....|....*...
gi 938340536 393 TL-ILTGLGTLITASYSL 409
Cdd:TIGR01770 405 WLaVIAVLTSVIGAFYYL 422
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-404 |
1.49e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.13 E-value: 1.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFI-ILALWGVIMTGSICLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 280 QTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 938340536 360 WFIASLANLALPPLPNLMGELMIITSLF-NWSMWTLILTGLGTLIT 404
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTFeAGFYVSGIIVLLSSLLV 421
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-422 |
2.37e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.61 E-value: 2.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 96 YISLLISLQIFLimAFSaTEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTL 175
Cdd:PRK06589 121 FFNLTILIGVLI--ALS-SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 176 SFLTLphlphiQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLII---LD 252
Cdd:PRK06589 198 DFVSG------GLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 253 PLTKEL--SYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCL 330
Cdd:PRK06589 272 YLQRIFaeFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYS 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 331 ANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWS-MWTLILTGLGTLITASY-S 408
Cdd:PRK06589 352 MGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsA 431
|
330
....*....|....
gi 938340536 409 LYMFLLTQRGPLPS 422
Cdd:PRK06589 432 LYLLKILSSIYKPS 445
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
149-418 |
3.62e-11 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 65.30 E-value: 3.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 149 YFLFYTLAGSLpLLVALLVYQSSAGTLSFLTLPHLPHIQlhtwadklWWAAcLLAFLVKMPLYGAHLWLPKAHVEAPIAG 228
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGTA--------AWLI-LIGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 229 SMVLAAVLLKLGGYGMMRVLiildPLTKELSYPFIILALWGVIMTgsicLRQTDLKSLIAYSSVSHMGLVAAGILIQTPW 308
Cdd:PRK12668 218 SVFLSAFTTKTAVYALARAF----PGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 309 GFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSL-- 386
Cdd:PRK12668 290 AINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAge 369
|
250 260 270
....*....|....*....|....*....|....*.
gi 938340536 387 --FNWSMWTLILTGLGTLITASYSL--YMFLLTQRG 418
Cdd:PRK12668 370 dhYVWVWLLLLLASAGTFLHFGIKLpyFAFFGGDSG 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-413 |
7.41e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 64.07 E-value: 7.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 4 ILAPTIFLFVST-------WFTPKKHLWSSTLLYSLIIAVASLlWLAAPSETGWSFLSPYMASDPLSTPLLVLTCWLLPL 76
Cdd:PRK05777 10 LLLPELILLGAAvvlllidAFVRRHSRRATLAVLALLLALVAL-LFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 77 MVLASQNHLkmEPTNRQRAYISLLISLQIFLIMAfSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAG-TYFLFYTL 155
Cdd:PRK05777 89 ALLLARPYL--EDRGRGEFYLLVLFALLGMMVMV-SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAiKYFVLGAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 156 AGSLPLLVALLVYqSSAGTLSFLTLPHLphIQLHTWADKLWWAACLL---AFLVKMPLYGAHLWLPKAHVEAPIAGSMVL 232
Cdd:PRK05777 166 ASGFLLYGMSLLY-GATGSLSFAGIAKA--LADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 233 AAVLlKLGGYGM-MRVL-IILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGF 310
Cdd:PRK05777 243 ATAP-KIAAFAVlLRLLvVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGY 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 311 TGALILMIAHGLTSSALF----CLANTNYERTHSRTMllaRGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSL 386
Cdd:PRK05777 322 SAVLFYLLAYLFMTLGAFgvisLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAA 398
|
410 420 430
....*....|....*....|....*....|..
gi 938340536 387 FNWSMWTLILTG-LGTLITASYSL----YMFL 413
Cdd:PRK05777 399 VEAGLWWLAVIGvLNSAIGAFYYLrvikLMYF 430
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
143-403 |
1.09e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 60.25 E-value: 1.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 143 RLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSF----LTLPHLP---HIQLHTWAdklwwAACLLAFLVKMPLYGAHL 215
Cdd:PRK12666 157 RVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMadlaQRIAQLPaadRALLEAGA-----ALLLVVFLIKAAMWPLNF 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 216 WLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRV-LIILDPLTKELSYPFIILALWGVIMT---GSI-CLRQTDLKSLIA 288
Cdd:PRK12666 232 WLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATlafGAIgVLAAQRLRRLAA 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 289 YSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLAN-----------------TNYERTHSRTMLLARGLQT 351
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEEVGVAIPA 388
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 352 VLPLMATWWFIASLANLALPPLPNLMGELMIITSLFN-------WSMWTLIL-TGLGTLI 403
Cdd:PRK12666 389 TMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWALVLlSGLAALI 448
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-397 |
1.37e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.13 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLII-----LDPLTKELSYPFIILALWGVIMTGS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 276 ICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANT---NYERTHSRTMLlarGLQTV 352
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKS 372
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 938340536 353 LPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILT 397
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
208-388 |
2.93e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 59.07 E-value: 2.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 208 MPLYGahlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKELSYPFIILALWGVIMTGSICLRQTDLKSLI 287
Cdd:PRK08042 197 IPLHG---WVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 288 AYSSVSHMGLV-------AAGILIQTP----WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLM 356
Cdd:PRK08042 274 AYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVI 353
|
170 180 190
....*....|....*....|....*....|..
gi 938340536 357 ATWWFIASLANLALPPLPNLMGELMIITSLFN 388
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-381 |
4.36e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 58.69 E-value: 4.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 94 RAYISLLISLQIFLIMAFSATEVIMFyVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 174 TLSFLTLPHLPHIQLHTWADKLWWAACLLAFL------VKMPLYgahLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 247 VliilDPLTKELSYPFIILALWGVI---MTGSICLRQTDLKSLIAYSSVSH----MGLVAAGILIQTPWGFTGALILMIA 319
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQlaylMTMYGYTTYHEPGLGVAAATFHLLN 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938340536 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELM 381
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-411 |
6.02e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 58.12 E-value: 6.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 263 IILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938340536 343 MLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTL----ILTGLGTLIT---ASYSLYM 411
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELaiimIIVSIGTFVSmmkAFYLIYL 425
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-410 |
1.08e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.63 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 113 ATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLPHLPHIQLHTWA 192
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPAVSV 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 193 DklwwAACLLA-FLVKMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRvliiLDPLTKELS---YPFIILAL 267
Cdd:PRK12644 205 A----VVLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR----LAPGFADVPvwrPTVLVLGL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 268 WGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLAR 347
Cdd:PRK12644 276 ATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLS 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938340536 348 GLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFN------WSMWTLILTGLGTLITASYSLY 410
Cdd:PRK12644 356 GLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
108-428 |
1.37e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 50.16 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 108 IMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTLphlphiq 187
Cdd:MTH00011 20 LMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKNITAL------- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 188 lhtwadklwwaACLLAFLVKMPLYGAHLWLPkaHVEAPIAGSMVLAavllkLGGYGMMRVLIILDPLTKELSYPFII-LA 266
Cdd:MTH00011 93 -----------MLLVSLMLKLGMAPCHFWFP--SVMSSISWTLCLI-----LSTWQKIAPLSILFFFTSHNILPMMTsMA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 267 LWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAagiLIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLA 346
Cdd:MTH00011 155 AMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 347 RGLQTVLplmatWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGL-GTLITASYslYMFLLTQRGPLPSHLI 425
Cdd:MTH00011 232 MSQTTSM-----SLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIvGSLMNLFY--YLNLIFNFMYLSPTFS 304
|
...
gi 938340536 426 SLD 428
Cdd:MTH00011 305 SLK 307
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
1.93e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 50.34 E-value: 1.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 60 DPLSTPLLVLTCWLLPLMVLASQNHLKMEP-TNRQRAYISLLISLQIFLImafSATEVIMFYVMFEATLIPTLIIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 139 NQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTL-------PHLPHIQLHTWADKLWWAA-------CLLAF 204
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsGIMDRGYYGGGAYESPLAPfaiigilLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 205 LVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLiildPLTKELSYPFIILALWGVI---MTGSICLRQT 281
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 282 DLKSLIAYSSVSHMGLVAAGILIQTPWGFtgALILMIAHGLTSSALFCLA-----NTNYERTHSRTMllaRGLQTVLPLM 356
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330 340
....*....|....*....|....*..
gi 938340536 357 ATWWFIASLANLALPPLPNLMGELMII 383
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
116-424 |
2.01e-06 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 50.31 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 116 VIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSSAGTLSFLTL-PHLPHIQLHTwadk 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMiANADEIQNSP---- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 195 LWWAACLLAFL---VKMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRvliiLDPLTKELSYPFIILALWGV 270
Cdd:PRK12645 208 LFIPAMILILLgafTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWFWTVTLVGL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 271 IMT--GSI-CLRQTDLKSLIAYSSVSHMGLV-------AAGILIQTPWG------FTGALILMIAHGLTSSALFCLANTN 334
Cdd:PRK12645 283 ITLfwGSLnAVKQTDLKGILAFSTVSQLGLImsllgigAASLHYQGDDSkiyaaaITAAIFHLINHATFKGSLFMIVGIV 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 335 YERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFN-----------WSMWTLILTGLGTLI 403
Cdd:PRK12645 363 DHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNateanlfsldtWGVLFPVIAWVASVF 442
|
330 340
....*....|....*....|..
gi 938340536 404 TASYSLYMFLLTQRGPL-PSHL 424
Cdd:PRK12645 443 TFVYSIIFIFKTFFGKYkPEQL 464
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
2.29e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 50.02 E-value: 2.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 197 WAACLLAFLVKM---------PLygaHLWLPKAhVEAPI-------AGSMVLAAVLLklggygmmrvLIILDPLTKELSY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL----------VARMYPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 261 PFIILALWGVI---MTGSICLRQTDLKSLIAYSSVSHMG--LVAAGIliqtpWGFTGALILMIAHGLTSSALFCLANT-- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 334 -------NYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSmwtLILTGLGTL---I 403
Cdd:PRK07376 365 hgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEAN---PALWFVGFLtagM 441
|
250
....*....|....*
gi 938340536 404 TASYSLYMFLLTQRG 418
Cdd:PRK07376 442 TAFYMFRMYFLTFEG 456
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
34-403 |
2.99e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 49.70 E-value: 2.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 34 IAVASLLWLAAPSETGWsFLSPYMASDPLSTPLLVLTCWLLPLMVLASQNHLKMEPtnRQRAYISLLISLQIFLIMAFSA 113
Cdd:PRK08168 43 LFLALLGLVLFATGAAW-PAAAWLEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEP--GQRRYVRALAGVLAAVHLLVLS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 114 TEVIMFYVMFEATLIPTLIIITRWGN-QMERLNAGTYFLFYTLAGSLPLLVALLVYQSsAGTLSFLTLphLPHIQLHTWA 192
Cdd:PRK08168 120 DHLLVLIAAWAAISLALHRLLCFYPDrPFARLAAHKKFIADRLAELLLLAAAALAYLE-VGSLSLSAL--WAHLAAQGAS 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 193 DKLWWAACLLAF--LVKMPLYGAHLWLPKAhVEAPIAGSMVLAAVLLKLGGYgmmrVLIILDPLTKELSYPFIILALWGV 270
Cdd:PRK08168 197 PSLQAAALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGF----VLIRFAPLLEQAPPARWLLVLVGL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 271 IMT---GSICLRQTDLKSLIAYSSVSHMGLvaagILIQTPWG-FTGALILMIAHGLTSSALFCLANTNYERTHSRTM--- 343
Cdd:PRK08168 272 ATAvlaGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLqgp 347
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 344 --------LLARGLQTVLPLMA--TWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLI 403
Cdd:PRK08168 348 qsaagvvsLLLAPLLSAALVLLlqSLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLVA 417
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
100-328 |
1.19e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 47.33 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 100 LISLQIFLIMafSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAG-TYFLFYTLAGSLPLLVALLVYQSSAGT-LSF 177
Cdd:MTH00196 1 MVALGILCLI--SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGLhLSY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 178 LTLPHLPHIQLHTWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAgSMVLAAVLLKLGgygmmrVLIILDPLTKE 257
Cdd:MTH00196 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLG------IFSILVSIGLN 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938340536 258 LSYpFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALF 328
Cdd:MTH00196 152 VNI-LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
92-415 |
3.83e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.22 E-value: 3.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 92 RQRAYISLLISLQIFLImafSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVYQSS 171
Cdd:MTH00020 112 RFMSYLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 172 AGTLSFltlPHLPHIQLHTWADKLWWAACLLAFLV--KMPLYGAHLWLPKAH-----VEAPI-AGSMVLAAVLLklggyg 243
Cdd:MTH00020 189 FGSLDF---SSVFNMVVSAPSSDITLICLFLFIGAvgKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------ 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 244 mmrvLIILDPLTKELSYPFIILALWG---VIMTGSICLRQTDLKSLIAYSSVSHMG--LVAAGIliqtpWGFTGALILMI 318
Cdd:MTH00020 260 ----LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQNDLKKVIAYSTCSQLGymVVACGL-----SHYSISLFHLM 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 319 AHGLTSSALFCLANTN-YERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSMWTLI-- 395
Cdd:MTH00020 331 NHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAyw 410
|
330 340
....*....|....*....|
gi 938340536 396 LTGLGTLITASYSLYMFLLT 415
Cdd:MTH00020 411 LGCFSALLTAFYSIRLIYLT 430
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
8.84e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.49 E-value: 8.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRVLIildpLTKELSYPFIILALWGVIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFL----DLYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 281 TDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTssaLFCLANTNYERTHSRTMLLARGLQTVLPLMatww 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDSGSMKDLGSLKPSYKTGLSIIS---- 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 938340536 361 FIASLAnlALPPLPNLMGELMIITSLFNWSMWTLILTG-LGTLITASYSLYMFLL 414
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-406 |
2.59e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.24 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 202 LAFLVKMPLYGAHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVLIILDPLTKE-LSYPFIILALWGVIMTGSICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGyFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 279 RQTDLKSLIAYSSVSHMG--LVAAGILIQTPWGFT--------GALILMIAHGLTSSALFCLANTnyerTHSRTMLLARG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 938340536 349 LQTVLPLMATWWFIASLAnlALPPLPNLMGELMIITSLFNWSMWTLILTGLGTLITAS 406
Cdd:PRK06459 322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
280-409 |
5.52e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 42.48 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 280 QTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATW 359
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATL 371
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 938340536 360 WFIASLANLALPPLPNLMGELM-----IITSLFNWSMWTL-ILTGLGTLITASYSL 409
Cdd:PRK12648 372 AMVAAAAMAGVPLLNGFLSKEMffaetLDTHLLGSLDWLLpVAATLAGAFSVAYSL 427
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
157-396 |
8.63e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.82 E-value: 8.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 157 GSLPLLVALLVYQSSAGTLSFltlphlphIQLHTWADKL----WWAACLLAFLVKMPL-----YGAHLWLPKAhVEAPIA 227
Cdd:PRK07390 183 GDLLLLMGVVALSPLAGTLNF--------SDLAAWAATAnldpLTATLLGLALIAGPTgkcaqFPLHLWLDEA-MEGPNP 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 228 GSMVLAAVLLKLGGYgmmrVLIILDPLTkELSyPFIILALWGV-----IMTGSICLRQTDLKSLIAYSSVSHMGLVAAGI 302
Cdd:PRK07390 254 ASILRNSVVVATGAW----VLIKLQPVL-ALS-PVALTVLIVIgtvtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAV 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 303 LIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMI 382
Cdd:PRK07390 328 GLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRL 404
|
250
....*....|....
gi 938340536 383 ITSLFNWSMWTLIL 396
Cdd:PRK07390 405 ADGLWAVSPWLVGV 418
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
271-433 |
8.63e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.55 E-value: 8.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 271 IMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPwgfTGALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGL 349
Cdd:MTH00209 251 LMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQP---ELAFFHLITHALFKALLFiCAGNIIHSHGHSQDIRMVGNL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 350 QTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLF--NWSMWTLILTGLGTLITASYSLYMFLLTQRGPLPSHLISL 427
Cdd:MTH00209 328 WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNS 407
|
....*.
gi 938340536 428 DPSHSR 433
Cdd:MTH00209 408 SFDQNK 413
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
278-419 |
2.14e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 40.53 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 278 LRQTDLKSLIAYSSVSHMGLVAAGILIQTPwgfTGALILMIAHGLTSSALFCLA-----NTNYERThSRTMllaRGLQTV 352
Cdd:MTH00004 292 LTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISTHAFFKAMLFLCSgsiihNLNNEQD-IRKM---GGLQKT 364
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938340536 353 LPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSM--WTLILTGLGTLITASYSLYMFLLTQRGP 419
Cdd:MTH00004 365 LPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLnaWALLLTLLATSFTAAYSLRMILLVQTGF 433
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
99-409 |
4.43e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.18 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 99 LLISLQIFLIMAFSATEVIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLpLLVALLVYQSSAGTLSFL 178
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASAL-LLFGGLLNAWTSGQWGIS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 179 TlphlphiqlhtWADKLWWAACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLlKLGGygmmrvLIILDPLTKEL 258
Cdd:MTH00200 88 E-----------MLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAP------FALLIQLAPAL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938340536 259 SYPFI-ILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAhgltSSALFCLANTNyer 337
Cdd:MTH00200 150 NSNILlLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVII----TLTVFLLLNLL--- 222
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938340536 338 tHSRTMLLARGLQTVLPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSM-WTLILTGLGTLITASYSL 409
Cdd:MTH00200 223 -NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLfIYATILLLGSLLSLFFYL 294
|
|
| |
