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Conserved domains on  [gi|334362178|ref|YP_004564226|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Hymenochirus boettgeri]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 3.47e-58

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 175.11  E-value: 3.47e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00136   3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00136  83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 3.47e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 175.11  E-value: 3.47e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00136   3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00136  83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-111 4.56e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   18 ALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPSPPLTIFWTSAI-IIL 96
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 334362178   97 LTIGLIFEWAQGGLE 111
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-112 1.37e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 79.78  E-value: 1.37e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   6 FAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPSPPL 85
Cdd:COG0838   12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFRELGW 89

                         90       100
                 ....*....|....*....|....*...
gi 334362178  86 TIFWTSAI-IILLTIGLIFEWAQGGLEW 112
Cdd:COG0838   90 FGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 3.47e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 175.11  E-value: 3.47e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00136   3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00136  83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-114 4.12e-55

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 167.09  E-value: 4.12e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 6.59e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 151.57  E-value: 6.59e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00113   2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWA 113
Cdd:MTH00113  82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-114 7.20e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 136.22  E-value: 7.20e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFaIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00106   3 LMLTLL-TNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00106  82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-114 8.62e-36

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 118.16  E-value: 8.62e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQL 80
Cdd:MTH00042   3 NLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLI 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  81 PSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00042  83 TNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-112 3.55e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 116.54  E-value: 3.55e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   5 IFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQLPSPp 84
Cdd:MTH00203   7 FFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL- 85

                         90       100
                 ....*....|....*....|....*...
gi 334362178  85 lTIFWTSAIIILLTIGLIFEWAQGGLEW 112
Cdd:MTH00203  86 -SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-114 4.73e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 93.38  E-value: 4.73e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITP-DSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQ 79
Cdd:MTH00148   3 SILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLG 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 334362178  80 LPSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00148  83 SSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-112 2.54e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 91.76  E-value: 2.54e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLPQITP-DSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQ 79
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 334362178  80 LPSPPLTIFWTSAIIILLTIGLIFEWAQGGLEW 112
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-111 4.56e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   18 ALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPSPPLTIFWTSAI-IIL 96
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 334362178   97 LTIGLIFEWAQGGLE 111
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 8-112 2.58e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 86.69  E-value: 2.58e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   8 IAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPSPPLTI 87
Cdd:MTH00055  14 FSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLF--PWCVVYNQIGLFG 91

                         90       100
                 ....*....|....*....|....*.
gi 334362178  88 FWTSAIIILLTIG-LIFEWAQGGLEW 112
Cdd:MTH00055  92 FWVMYLFLIILTIgLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-114 4.46e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 83.50  E-value: 4.46e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLP-QITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQ 79
Cdd:MTH00202   3 LILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLK 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 334362178  80 LPSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWAE 114
Cdd:MTH00202  83 SSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 1.41e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 82.21  E-value: 1.41e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILAALSFWLP-QITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQ 79
Cdd:MTH00012   3 LMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  80 LPSPPLTIFWTSAIIILLTIGLIFEWAQGGLEWA 113
Cdd:MTH00012  83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 3-112 5.92e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 80.49  E-value: 5.92e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   3 LTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPS 82
Cdd:MTH00018   4 FILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLF--PWCVLYNQ 81

                         90       100       110
                 ....*....|....*....|....*....|.
gi 334362178  83 PPLTIFWTSAIIILLTIG-LIFEWAQGGLEW 112
Cdd:MTH00018  82 IAPFGFWTMVGFLFILTLgLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-112 1.37e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 79.78  E-value: 1.37e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   6 FAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPSPPL 85
Cdd:COG0838   12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFRELGW 89

                         90       100
                 ....*....|....*....|....*...
gi 334362178  86 TIFWTSAI-IILLTIGLIFEWAQGGLEW 112
Cdd:COG0838   90 FGLIEMLVfIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 6-113 1.47e-19

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 77.21  E-value: 1.47e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   6 FAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLlpIPWACQLPSPPL 85
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92

                         90       100
                 ....*....|....*....|....*....
gi 334362178  86 TIFWTSAIIILLTIG-LIFEWAQGGLEWA 113
Cdd:PRK06602  93 LGFVEAMIFILVLLVgLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 28-112 1.83e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.88  E-value: 1.83e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178  28 PDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWACQLPSPPLTIFW-TSAIIILLTIGLIFEWA 106
Cdd:MTH00030  39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLF--PWSIVFNQLNLFSFWiVYTFLIVLAIGLAYEWI 116


                 ....*.
gi 334362178 107 QGGLEW 112
Cdd:MTH00030 117 KGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 3-112 1.17e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 48.90  E-value: 1.17e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   3 LTIFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLP--FSMRFFLIAILFLLFDLEIALLlpIPWACQL 80
Cdd:PRK07928   8 LVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFL--YPWAVSF 85

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 334362178  81 PSppLTIFWTSAIIILLTIGL---IFEWAQGGLEW 112
Cdd:PRK07928  86 DA--LGVFGLVEMALFMLTVFvayAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 5-72 1.41e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 46.04  E-value: 1.41e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 334362178   5 IFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLL 72
Cdd:MTH00092   7 VFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ndhC CHL00022
NADH dehydrogenase subunit 3
 5-77 2.31e-07

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 45.75  E-value: 2.31e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 334362178   5 IFAIAMILSTILAALSFWLPQ----ITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpiPWA 77
Cdd:CHL00022   9 IFWAFLIISSLIPILAFLISGllapISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLY--PWA 83
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-75 2.08e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 40.27  E-value: 2.08e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 334362178  34 SPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIP 75
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
32-77 6.82e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 39.26  E-value: 6.82e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 334362178  32 KLSPYECGFDPLGSARlPFSMRFFLIAILFLLFDLEIALLLpiPWA 77
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMF--PWA 89
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
1-112 9.47e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 38.96  E-value: 9.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   1 MTLTIFAIAMILSTILA-ALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPipWACQ 79
Cdd:PRK07756  10 MIVLIFLLLGILLPVVAlTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVA 87

                         90       100       110
                 ....*....|....*....|....*....|....
gi 334362178  80 LPSPPL-TIFWTSAIIILLTIGLIFEWAQGGLEW 112
Cdd:PRK07756  88 YDKLGLfALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 5-92 1.10e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 36.12  E-value: 1.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334362178   5 IFAIAMILSTILAALSFWLPQITPDSEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPIPWACQLPSPP 84
Cdd:PRK06073  13 VIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYTFRD 92


                 ....*...
gi 334362178  85 LTIFWTSA 92
Cdd:PRK06073  93 LLLLIVVA 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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