|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
4-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 608.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00119 12 LKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00119 92 FICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00119 172 DNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00119 252 GDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVA 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKIIWP 372
Cdd:MTH00119 332 NLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-366 |
7.58e-115 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 339.46 E-value: 7.58e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 12 LDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHI 91
Cdd:COG1290 28 LEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHM 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 92 ARGIYYGSylYKN----TWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNST 167
Cdd:COG1290 108 FRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDAT 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 168 LTRFFTF-HFLFPFIILALTGLHILFLHETGSNNPTG----LNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPyl 242
Cdd:COG1290 186 LNRFFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP-- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 243 LGDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIP--NKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWL 320
Cdd:COG1290 264 INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVA 343
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 164420892 321 LLSTTILLTWMATKPVEYPFItmGQLASLLYFSIFTILLPLTSMLE 366
Cdd:COG1290 344 FIVFFIVLTILGANPPIATLL--GSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-199 |
6.91e-76 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 233.03 E-value: 6.91e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 2 MKLKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGAS 81
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 82 LFFICMYIHIARGIYYGSY--LYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWG 159
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 164420892 160 GFSISNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSN 199
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-197 |
2.28e-70 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 218.41 E-value: 2.28e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 13 DLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHIA 92
Cdd:pfam00033 3 SLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 93 RGIYYG--SYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTR 170
Cdd:pfam00033 83 RGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTR 162
|
170 180
....*....|....*....|....*..
gi 164420892 171 FFTFHFLFPFIILALTGLHILFLHETG 197
Cdd:pfam00033 163 FFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
222-311 |
9.62e-12 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 62.51 E-value: 9.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 222 ILGvsfTLLCLLTLIFFSPYLLGDPenfskANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTH 301
Cdd:TIGR01156 44 ILG---TIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90
....*....|
gi 164420892 302 LSNQRTKSFQ 311
Cdd:TIGR01156 116 NVNKFQNPFR 125
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
4-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 608.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00119 12 LKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00119 92 FICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00119 172 DNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00119 252 GDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVA 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKIIWP 372
Cdd:MTH00119 332 NLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
4-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 562.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00131 11 LKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00131 91 FICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00131 171 DNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00131 251 GDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVA 330
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKII 370
Cdd:MTH00131 331 DVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKAL 377
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 552.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00100 11 MKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00100 91 FICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00100 171 DKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00100 251 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVA 330
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKII 370
Cdd:MTH00100 331 DLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
4-358 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 548.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTIL 358
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
13-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 542.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 13 DLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHIA 92
Cdd:MTH00191 17 DLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIG 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 93 RGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTRFF 172
Cdd:MTH00191 97 RGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 173 TFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLLGDPENFSKA 252
Cdd:MTH00191 177 TFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 253 NPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLSTTILLTWMA 332
Cdd:MTH00191 257 NPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLG 336
|
330 340
....*....|....*....|....*....
gi 164420892 333 TKPVEYPFITMGQLASLLYFSIFTILLPL 361
Cdd:MTH00191 337 GQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
4-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 531.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00145 12 LKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00145 92 FICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00145 172 GNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00145 252 GDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVG 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFtILLPLTSMLENKII 370
Cdd:MTH00145 332 NFFILTWIGACPVEEPYETIGQVFTVLYFLFF-LILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
4-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 529.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00074 12 LKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00074 92 FICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00074 172 DKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00074 252 GDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVA 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKII 370
Cdd:MTH00074 332 NTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLL 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-370 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 506.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00034 11 FKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00034 91 FICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00034 171 DNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTAL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00034 251 NDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIA 330
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKII 370
Cdd:MTH00034 331 TFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
4-370 |
1.42e-169 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 478.02 E-value: 1.42e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00016 12 IKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00016 92 FICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00016 172 DNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNIL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00016 252 GDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVS 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFtILLPLTSMLENKII 370
Cdd:MTH00016 332 NFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYF-MINPLLMKLWDKLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-372 |
2.60e-160 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 454.54 E-value: 2.60e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00022 10 LSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00022 90 FLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00022 170 SNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00022 250 GDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIV 329
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKIIWP 372
Cdd:MTH00022 330 DFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
12-370 |
1.83e-158 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 449.93 E-value: 1.83e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 12 LDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHI 91
Cdd:MTH00053 20 IDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHI 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 92 ARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTRF 171
Cdd:MTH00053 100 GRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 172 FTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLLGDPENFSK 251
Cdd:MTH00053 180 YSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQ 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 252 ANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLSTTILLTWM 331
Cdd:MTH00053 260 ANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWI 339
|
330 340 350
....*....|....*....|....*....|....*....
gi 164420892 332 ATKPVEYPFITMGQLASLLYFSIFTILLPLTSMLENKII 370
Cdd:MTH00053 340 GGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLL 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
4-370 |
1.07e-146 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 420.10 E-value: 1.07e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00224 12 IKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00224 92 FLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLL 243
Cdd:MTH00224 172 DNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLF 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 244 GDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLS 323
Cdd:MTH00224 252 TDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVT 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 164420892 324 TTILLTWMATKPVEYPFITMGQLASLLYFSIFtILLPLTSMLENKII 370
Cdd:MTH00224 332 SWAILTWIGGRPVEDPFEGIGQVFTILYFSYF-IISPAISKLWDDLL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
12-367 |
7.85e-120 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 351.93 E-value: 7.85e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 12 LDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHI 91
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 92 ARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTRF 171
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 172 FTFHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVsFTLLCLLTLIFFSPY---LLGDPEN 248
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGF-LILFGVFVIIGIEPRietLLQDPEN 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 249 FSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLSTTILL 328
Cdd:MTH00033 255 FIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIIL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 164420892 329 TWMATKPV-EYPFITMGQLASLLYFSIFTILLPLTSMLEN 367
Cdd:MTH00033 335 TWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-366 |
7.58e-115 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 339.46 E-value: 7.58e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 12 LDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHI 91
Cdd:COG1290 28 LEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHM 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 92 ARGIYYGSylYKN----TWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNST 167
Cdd:COG1290 108 FRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDAT 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 168 LTRFFTF-HFLFPFIILALTGLHILFLHETGSNNPTG----LNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPyl 242
Cdd:COG1290 186 LNRFFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP-- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 243 LGDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIP--NKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWL 320
Cdd:COG1290 264 INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVA 343
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 164420892 321 LLSTTILLTWMATKPVEYPFItmGQLASLLYFSIFTILLPLTSMLE 366
Cdd:COG1290 344 FIVFFIVLTILGANPPIATLL--GSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
14-359 |
6.92e-114 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 335.76 E-value: 6.92e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 14 LPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHIAR 93
Cdd:MTH00086 10 LPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 94 GIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTRFFT 173
Cdd:MTH00086 90 GLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 174 FHFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFtLLCLLTLIFFSPYLLGDPENFSKAN 253
Cdd:MTH00086 170 LHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIF-WLVFIIFSLFYPFNLGDPEMFIEAD 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 254 PMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFThlsNQRTKSFQPLTQNLLWLLLSTTILLTWMAT 333
Cdd:MTH00086 249 PMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVVNVILSWLGQ 325
|
330 340
....*....|....*....|....*.
gi 164420892 334 KPVEYPFITMGQLASLLYFSIFTILL 359
Cdd:MTH00086 326 CLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
4-350 |
1.74e-78 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 245.28 E-value: 1.74e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 4 LKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLF 83
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 84 FICMYIHIARGIYYGSYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSI 163
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 164 SNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSNNPTGL-NSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYL 242
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 243 LGDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGvLALIASILILTILPfthlSNQRTKSFQPLTQNLLWLLL 322
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIV 316
|
330 340
....*....|....*....|....*...
gi 164420892 323 STTILLTWMATKPVEYPFITMGQLASLL 350
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-199 |
6.91e-76 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 233.03 E-value: 6.91e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 2 MKLKHIKTAALDLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGAS 81
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 82 LFFICMYIHIARGIYYGSY--LYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWG 159
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 164420892 160 GFSISNSTLTRFFTFHFLFPFIILALTGLHILFLHETGSN 199
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-197 |
2.28e-70 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 218.41 E-value: 2.28e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 13 DLPTPSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHIA 92
Cdd:pfam00033 3 SLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 93 RGIYYG--SYLYKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTR 170
Cdd:pfam00033 83 RGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTR 162
|
170 180
....*....|....*....|....*..
gi 164420892 171 FFTFHFLFPFIILALTGLHILFLHETG 197
Cdd:pfam00033 163 FFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
200-347 |
3.94e-48 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 159.73 E-value: 3.94e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 200 NPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIFFSPYLLGDPENFSKANPMSTPLHIKPEWYFLFAYAILRSIPN 279
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164420892 280 KLGGVLALIASILILTILPFTHLSNQRTKsFQPLTQNLLWLLLSTTILLTWMATKPVEYPFITMGQLA 347
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
81-246 |
1.28e-39 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 138.53 E-value: 1.28e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 81 SLFFICMYIHIARGIYYGSYLY--KNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVW 158
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 159 GGFSISNSTLTRFFTF-HFLFPFIILALTGLHILFLHETGSNNPTGLNSDMDKIPFHPYFSMKDILGVSFTLLCLLTLIF 237
Cdd:pfam13631 81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 164420892 238 FSPYLLGDP 246
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
26-201 |
8.08e-33 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 122.13 E-value: 8.08e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 26 FGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHIARGIYYGSYLYKN- 104
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 105 -TWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTRFFTFHFLFP-FII 182
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHVFFLpWAL 203
|
170
....*....|....*....
gi 164420892 183 LALTGLHILFLHETGSNNP 201
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
252-351 |
1.25e-30 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 112.57 E-value: 1.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 252 ANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTHLSNQRTKSFQPLTQNLLWLLLSTTILLTWM 331
Cdd:pfam00032 2 ANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGWL 81
|
90 100
....*....|....*....|
gi 164420892 332 ATKPVEYPFITMGQLASLLY 351
Cdd:pfam00032 82 GKQPPTGPYTLLGQIATVYY 101
|
|
| petB |
CHL00070 |
cytochrome b6 |
17-170 |
7.91e-25 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 100.57 E-value: 7.91e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 17 PSNISAMWNFGSLLIMCLMMQILSGIFLAMHYTADISMAFSSVIHISRDVNAGWLIQNLHANGASLFFICMYIHIARGIY 96
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164420892 97 YGSYL--YKNTWMTGVIILLTTMLTAFLGYVLPWGQMSLWGATVITNLLSAIPYVGSSMVTWVWGGFSISNSTLTR 170
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTR 182
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
222-299 |
1.26e-13 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 68.10 E-value: 1.26e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164420892 222 ILGvsfTLLCLLTLIFFSPYLLGDPenfskANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPF 299
Cdd:CHL00058 44 ILG---TIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPF 113
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
222-311 |
9.62e-12 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 62.51 E-value: 9.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420892 222 ILGvsfTLLCLLTLIFFSPYLLGDPenfskANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPFTH 301
Cdd:TIGR01156 44 ILG---TIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90
....*....|
gi 164420892 302 LSNQRTKSFQ 311
Cdd:TIGR01156 116 NVNKFQNPFR 125
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
228-299 |
3.15e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 61.35 E-value: 3.15e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164420892 228 TLLCLLTLIFFSPYLLGDPenfskANPMSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILTILPF 299
Cdd:COG5679 48 TIALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPF 114
|
|
| |
