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protein fantom isoform X21 [Homo sapiens]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
SMC_prok_B super family
cl37069 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
201-449
4.86e-13
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
TIGR02168 :Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 72.40
E-value: 4.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 L E E A R G E IRN LE NVIQSQ R GQI EEL EHLAEI L KTQ L R R K E N E I E lsll QL R E QQ A TDQRSNIRDNV E MIK L HKQ L V E KSN 280
Cdd:TIGR02168 700 L A E L R K E LEE LE EELEQL R KEL EEL SRQISA L RKD L A R L E A E V E ---- QL E E RI A QLSKELTELEA E IEE L EER L E E AEE 775
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 281 A L SAM E GKFIQ L QEKQRT L RISHD AL MANG DEL NMQ L KE ------- Q R LKCC SLE KQLHS mkf S ERR I E E L QDR I ND L EK 353
Cdd:TIGR02168 776 E L AEA E AEIEE L EAQIEQ L KEELK AL REAL DEL RAE L TL lneeaan L R ERLE SLE RRIAA --- T ERR L E D L EEQ I EE L SE 852
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 354 ER E L L KENYDK L yd SAFSAAH E EQWKLKEQQLKVQIAQ L E t A L K S D L TDKT E I L DR L KTE R GA L INQN E K L VQENRE L Q L 433
Cdd:TIGR02168 853 DI E S L AAEIEE L -- EELIEEL E SELEALLNERASLEEA L A - L L R S E L EELS E E L RE L ESK R SE L RREL E E L REKLAQ L E L 929
250
....*....|....*.
gi 2462548289 434 QYLEQKQQL D E L KK R I 449
Cdd:TIGR02168 930 RLEGLEVRI D N L QE R L 945
EnvC super family
cl34844 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
368-572
3.34e-06
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
COG4942 :Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 49.38
E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 368 S A FS A AHEEQWKLKEQ -- QL KVQ IA Q LE TA L KSDLTDKTEI L DR L KTERGALINQNEKL vqen R E L QLQYLEQKQQ L D EL 445
Cdd:COG4942 13 L A AA A QADAAAEAEAE le QL QQE IA E LE KE L AALKKEEKAL L KQ L AALERRIAALARRI ---- R A L EQELAALEAE L A EL 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 446 K K R I KLYNQ E NDINAD EL S E al LL IKAQKEQKNGD L SF L VKVDS -------- EIN K D L ERSM RE LQATHAETVQ EL EKT R 517
Cdd:COG4942 89 E K E I AELRA E LEAQKE EL A E -- LL RALYRLGRQPP L AL L LSPED fldavrrl QYL K Y L APAR RE QAEELRADLA EL AAL R 166
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2462548289 518 NM L IMQHKINKDYQM E V E AVTRKM E N L QQDYELKVEQYVHL L DIR AA RIHK L EEA 572
Cdd:COG4942 167 AE L EAERAELEALLA E L E EERAAL E A L KAERQKLLARLEKE L AEL AA ELAE L QQE 221
SMC_prok_B super family
cl37069 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
47-321
2.09e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
TIGR02168 :Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.20
E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 47 REELE DRFLR L HDENIL L KQHARKQEDKIKRMATKLIRLVNDKKRY E RVGGGPKR L GRDV - EM E EMIEQ L Q E KVHE LE K Q 125
Cdd:TIGR02168 238 REELE ELQEE L KEAEEE L EELTAELQELEEKLEELRLEVSELEEEI E ELQKELYA L ANEI s RL E QQKQI L R E RLAN LE R Q 317
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 126 N E T L KNR L ISAKQQ L QTQGYR ---- QTPYNNVQSRINTGRRKAN E NAGLQ E CPRKGIKFQDA dvaetphpmftkygns L L 201
Cdd:TIGR02168 318 L E E L EAQ L EELESK L DELAEE lael EEKLEELKEELESLEAELE E LEAEL E ELESRLEELEE ---------------- Q L 381
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 202 E EA R GEIRN LE NV I Q S QRGQ IE E LE HLA E I L KTQLR R KEN EIE LS L LQ L R E QQATDQRSNIRDNV E MI - K L HKQ L VEKSN 280
Cdd:TIGR02168 382 E TL R SKVAQ LE LQ I A S LNNE IE R LE ARL E R L EDRRE R LQQ EIE EL L KK L E E AELKELQAELEELE E EL e E L QEE L ERLEE 461
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2462548289 281 AL SAMEGKFIQLQEKQRTLRISHDA L M A NG D E L NMQLKEQR 321
Cdd:TIGR02168 462 AL EELREELEEAEQALDAAERELAQ L Q A RL D S L ERLQENLE 502
Name
Accession
Description
Interval
E-value
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
201-449
4.86e-13
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 72.40
E-value: 4.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 L E E A R G E IRN LE NVIQSQ R GQI EEL EHLAEI L KTQ L R R K E N E I E lsll QL R E QQ A TDQRSNIRDNV E MIK L HKQ L V E KSN 280
Cdd:TIGR02168 700 L A E L R K E LEE LE EELEQL R KEL EEL SRQISA L RKD L A R L E A E V E ---- QL E E RI A QLSKELTELEA E IEE L EER L E E AEE 775
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 281 A L SAM E GKFIQ L QEKQRT L RISHD AL MANG DEL NMQ L KE ------- Q R LKCC SLE KQLHS mkf S ERR I E E L QDR I ND L EK 353
Cdd:TIGR02168 776 E L AEA E AEIEE L EAQIEQ L KEELK AL REAL DEL RAE L TL lneeaan L R ERLE SLE RRIAA --- T ERR L E D L EEQ I EE L SE 852
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 354 ER E L L KENYDK L yd SAFSAAH E EQWKLKEQQLKVQIAQ L E t A L K S D L TDKT E I L DR L KTE R GA L INQN E K L VQENRE L Q L 433
Cdd:TIGR02168 853 DI E S L AAEIEE L -- EELIEEL E SELEALLNERASLEEA L A - L L R S E L EELS E E L RE L ESK R SE L RREL E E L REKLAQ L E L 929
250
....*....|....*.
gi 2462548289 434 QYLEQKQQL D E L KK R I 449
Cdd:TIGR02168 930 RLEGLEVRI D N L QE R L 945
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
201-476
5.25e-11
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 65.73
E-value: 5.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 LEE ARG E IRN LE NVIQSQRGQIE ELE HLA E I L KTQ L RRK E N E I E LSLLQLR E QQ A tdqrsnirdnv E MIK L HKQLVEKSN 280
Cdd:COG1196 241 LEE LEA E LEE LE AELEELEAELA ELE AEL E E L RLE L EEL E L E L E EAQAEEY E LL A ----------- E LAR L EQDIARLEE 309
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 281 ALSAM E GKFIQ L Q E KQRT L RISHDA L MANGD EL NMQ L K E QRLKCCSL E KQ L H sm KFS E RRI E ELQDRINDL E KER EL LK E 360
Cdd:COG1196 310 RRREL E ERLEE L E E ELAE L EEELEE L EEELE EL EEE L E E AEEELEEA E AE L A -- EAE E ALL E AEAELAEAE E ELE EL AE E 387
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 361 NYDK L YDS A FS AA HE E QWKLK E QQ L KVQIAQ LE TA L KSDLTDKT E ILDRLKT E RG AL INQN E KLVQENR E LQLQYLEQKQ 440
Cdd:COG1196 388 LLEA L RAA A EL AA QL E ELEEA E EA L LERLER LE EE L EELEEALA E LEEEEEE E EE AL EEAA E EEAELEE E EEALLELLAE 467
250 260 270
....*....|....*....|....*....|....*.
gi 2462548289 441 Q L D E LKKRIKLYNQENDIN A DELSEA LLL IK A QKEQ 476
Cdd:COG1196 468 L L E E AALLEAALAELLEEL A EAAARL LLL LE A EADY 503
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
368-572
3.34e-06
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 49.38
E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 368 S A FS A AHEEQWKLKEQ -- QL KVQ IA Q LE TA L KSDLTDKTEI L DR L KTERGALINQNEKL vqen R E L QLQYLEQKQQ L D EL 445
Cdd:COG4942 13 L A AA A QADAAAEAEAE le QL QQE IA E LE KE L AALKKEEKAL L KQ L AALERRIAALARRI ---- R A L EQELAALEAE L A EL 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 446 K K R I KLYNQ E NDINAD EL S E al LL IKAQKEQKNGD L SF L VKVDS -------- EIN K D L ERSM RE LQATHAETVQ EL EKT R 517
Cdd:COG4942 89 E K E I AELRA E LEAQKE EL A E -- LL RALYRLGRQPP L AL L LSPED fldavrrl QYL K Y L APAR RE QAEELRADLA EL AAL R 166
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2462548289 518 NM L IMQHKINKDYQM E V E AVTRKM E N L QQDYELKVEQYVHL L DIR AA RIHK L EEA 572
Cdd:COG4942 167 AE L EAERAELEALLA E L E EERAAL E A L KAERQKLLARLEKE L AEL AA ELAE L QQE 221
PLN02939
PLN02939 transferase, transferring glycosyl groups
148-515
1.77e-04
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain]
Cd Length: 977
Bit Score: 44.51
E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 148 T PYNNVQS R INTG R RK A NENAGLQECPRKGIKF Q DA D VA etphpmftkygnsl LE EAR G E I R N L E - N VIQSQRGQIEE LE 226
Cdd:PLN02939 91 T SSDDDHN R ASMQ R DE A IAAIDNEQQTNSKDGE Q LS D FQ -------------- LE DLV G M I Q N A E k N ILLLNQARLQA LE 156
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 227 H L AE IL -- K TQ L RR K E N EI E LS L LQLREQQATDQRSN I RDNVEMIK L H K QLV E KSNALSAMEGKFIQ L QEKQRT L R ishd 304
Cdd:PLN02939 157 D L EK IL te K EA L QG K I N IL E MR L SETDARIKLAAQEK I HVEILEEQ L E K LRN E LLIRGATEGLCVHS L SKELDV L K ---- 232
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 305 almangd E L NM Q LK E qrlkccsl EK Q LHSMKFS E rr IE E LQD R IND LEKER E LL KENYDK L y D S A F SA A H E EQW KL KEQ Q 384
Cdd:PLN02939 233 ------- E E NM L LK D -------- DI Q FLKAELI E -- VA E TEE R VFK LEKER S LL DASLRE L - E S K F IV A Q E DVS KL SPL Q 294
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 385 LKVQIAQL E TA lksdltdk TEI LDR LK tergali NQ N EK --- LVQE N RE L qlqyleq KQQL D E L KKRI K LY N -- QENDIN 459
Cdd:PLN02939 295 YDCWWEKV E NL -------- QDL LDR AT ------- NQ V EK aal VLDQ N QD L ------- RDKV D K L EASL K EA N vs KFSSYK 352
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462548289 460 ADE L SEA L L L IKAQKEQKNGDLSFLVKV dseinkd LER S MR E L Q A T HAETVQ E LE K 515
Cdd:PLN02939 353 VEL L QQK L K L LEERLQASDHEIHSYIQL ------- YQE S IK E F Q D T LSKLKE E SK K 401
CCDC158
pfam15921 Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...
39-574
5.99e-04
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain]
Cd Length: 1112
Bit Score: 42.80
E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 39 RQAVS RV SR E --- ELE D RFL RL HDE N I L LKQHARKQEDKIKRMA TKL irlvn DKKRY ER VGGGPK R LGRDVEM E EMIE QL 115
Cdd:pfam15921 73 KEHIE RV LE E ysh QVK D LQR RL NES N E L HEKQKFYLRQSVIDLQ TKL ----- QEMQM ER DAMADI R RRESQSQ E DLRN QL 147
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 116 Q EK VHELE KQNETLKNR L ISAKQ Q LQTQGYRQTPYNN V QSR I NTGRRKAN E NA G lqecpr K G I KFQ D A dvaetphp M F T K 195
Cdd:pfam15921 148 Q NT VHELE AAKCLKEDM L EDSNT Q IEQLRKMMLSHEG V LQE I RSILVDFE E AS G ------ K K I YEH D S -------- M S T M 213
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 196 YGN SL LEEARGEI R N L ENV I QSQR G Q I EEL E HLA E I LK TQLRR K ----------------- E N E I E LSL L QLREQQ A TD Q 258
Cdd:pfam15921 214 HFR SL GSAISKIL R E L DTE I SYLK G R I FPV E DQL E A LK SESQN K ielllqqhqdrieqlis E H E V E ITG L TEKASS A RS Q 293
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 259 RSN I RDNV E M I -- KLHK Q LVEKSNA LS AM E GKFI QL QEKQ R TLRISHDALM ang D EL NM Q -- L KEQR L KCCSL E KQLH S M 334
Cdd:pfam15921 294 ANS I QSQL E I I qe QARN Q NSMYMRQ LS DL E STVS QL RSEL R EAKRMYEDKI --- E EL EK Q lv L ANSE L TEART E RDQF S Q 370
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 335 K f S ERRIEE LQ DRIN DL --- EKE RE L L KE NYDK L Y D ---- SAFSAA H EEQ w K L KEQQLK VQ ia Q LE TA LK sdl TD K T E IL 407
Cdd:pfam15921 371 E - S GNLDDQ LQ KLLA DL hkr EKE LS L E KE QNKR L W D rdtg NSITID H LRR - E L DDRNME VQ -- R LE AL LK --- AM K S E CQ 443
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 408 DRLKTERG A LINQ NE K L v QENRE L QL Q YLEQ K QQ L DEL ----- K K RIK L YNQ E NDIN ad E L SEA L LLIKAQK E QK N GDLS 482
Cdd:pfam15921 444 GQMERQMA A IQGK NE S L - EKVSS L TA Q LEST K EM L RKV veelt A K KMT L ESS E RTVS -- D L TAS L QEKERAI E AT N AEIT 520
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 483 F L - VK VD SEIN ----- K DLERSM R EL Q A - TH A ETV Q EL EK TRNML I MQHK I NKDY Q ----------- M E VE AV tr KM E NL 544
Cdd:pfam15921 521 K L r SR VD LKLQ elqhl K NEGDHL R NV Q T e CE A LKL Q MA EK DKVIE I LRQQ I ENMT Q lvgqhgrtaga M Q VE KA -- QL E KE 598
570 580 590
....*....|....*....|....*....|
gi 2462548289 545 QQ D YE L KVEQYVH L L D IRA A R I HK LE EA VS 574
Cdd:pfam15921 599 IN D RR L ELQEFKI L K D KKD A K I RE LE AR VS 628
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
47-321
2.09e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.20
E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 47 REELE DRFLR L HDENIL L KQHARKQEDKIKRMATKLIRLVNDKKRY E RVGGGPKR L GRDV - EM E EMIEQ L Q E KVHE LE K Q 125
Cdd:TIGR02168 238 REELE ELQEE L KEAEEE L EELTAELQELEEKLEELRLEVSELEEEI E ELQKELYA L ANEI s RL E QQKQI L R E RLAN LE R Q 317
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 126 N E T L KNR L ISAKQQ L QTQGYR ---- QTPYNNVQSRINTGRRKAN E NAGLQ E CPRKGIKFQDA dvaetphpmftkygns L L 201
Cdd:TIGR02168 318 L E E L EAQ L EELESK L DELAEE lael EEKLEELKEELESLEAELE E LEAEL E ELESRLEELEE ---------------- Q L 381
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 202 E EA R GEIRN LE NV I Q S QRGQ IE E LE HLA E I L KTQLR R KEN EIE LS L LQ L R E QQATDQRSNIRDNV E MI - K L HKQ L VEKSN 280
Cdd:TIGR02168 382 E TL R SKVAQ LE LQ I A S LNNE IE R LE ARL E R L EDRRE R LQQ EIE EL L KK L E E AELKELQAELEELE E EL e E L QEE L ERLEE 461
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2462548289 281 AL SAMEGKFIQLQEKQRTLRISHDA L M A NG D E L NMQLKEQR 321
Cdd:TIGR02168 462 AL EELREELEEAEQALDAAERELAQ L Q A RL D S L ERLQENLE 502
Name
Accession
Description
Interval
E-value
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
201-449
4.86e-13
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 72.40
E-value: 4.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 L E E A R G E IRN LE NVIQSQ R GQI EEL EHLAEI L KTQ L R R K E N E I E lsll QL R E QQ A TDQRSNIRDNV E MIK L HKQ L V E KSN 280
Cdd:TIGR02168 700 L A E L R K E LEE LE EELEQL R KEL EEL SRQISA L RKD L A R L E A E V E ---- QL E E RI A QLSKELTELEA E IEE L EER L E E AEE 775
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 281 A L SAM E GKFIQ L QEKQRT L RISHD AL MANG DEL NMQ L KE ------- Q R LKCC SLE KQLHS mkf S ERR I E E L QDR I ND L EK 353
Cdd:TIGR02168 776 E L AEA E AEIEE L EAQIEQ L KEELK AL REAL DEL RAE L TL lneeaan L R ERLE SLE RRIAA --- T ERR L E D L EEQ I EE L SE 852
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 354 ER E L L KENYDK L yd SAFSAAH E EQWKLKEQQLKVQIAQ L E t A L K S D L TDKT E I L DR L KTE R GA L INQN E K L VQENRE L Q L 433
Cdd:TIGR02168 853 DI E S L AAEIEE L -- EELIEEL E SELEALLNERASLEEA L A - L L R S E L EELS E E L RE L ESK R SE L RREL E E L REKLAQ L E L 929
250
....*....|....*.
gi 2462548289 434 QYLEQKQQL D E L KK R I 449
Cdd:TIGR02168 930 RLEGLEVRI D N L QE R L 945
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
201-476
5.25e-11
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 65.73
E-value: 5.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 LEE ARG E IRN LE NVIQSQRGQIE ELE HLA E I L KTQ L RRK E N E I E LSLLQLR E QQ A tdqrsnirdnv E MIK L HKQLVEKSN 280
Cdd:COG1196 241 LEE LEA E LEE LE AELEELEAELA ELE AEL E E L RLE L EEL E L E L E EAQAEEY E LL A ----------- E LAR L EQDIARLEE 309
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 281 ALSAM E GKFIQ L Q E KQRT L RISHDA L MANGD EL NMQ L K E QRLKCCSL E KQ L H sm KFS E RRI E ELQDRINDL E KER EL LK E 360
Cdd:COG1196 310 RRREL E ERLEE L E E ELAE L EEELEE L EEELE EL EEE L E E AEEELEEA E AE L A -- EAE E ALL E AEAELAEAE E ELE EL AE E 387
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 361 NYDK L YDS A FS AA HE E QWKLK E QQ L KVQIAQ LE TA L KSDLTDKT E ILDRLKT E RG AL INQN E KLVQENR E LQLQYLEQKQ 440
Cdd:COG1196 388 LLEA L RAA A EL AA QL E ELEEA E EA L LERLER LE EE L EELEEALA E LEEEEEE E EE AL EEAA E EEAELEE E EEALLELLAE 467
250 260 270
....*....|....*....|....*....|....*.
gi 2462548289 441 Q L D E LKKRIKLYNQENDIN A DELSEA LLL IK A QKEQ 476
Cdd:COG1196 468 L L E E AALLEAALAELLEEL A EAAARL LLL LE A EADY 503
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
106-490
1.70e-08
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 57.76
E-value: 1.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 106 VEME E MIEQ L QEKVH ELE K Q NET L K nrlisa K Q QLQTQG Y R -- QTPYNNVQSRINTG R RKAN enaglqecp R KGIKFQDA 183
Cdd:TIGR02168 182 ERTR E NLDR L EDILN ELE R Q LKS L E ------ R Q AEKAER Y K el KAELRELELALLVL R LEEL --------- R EELEELQE 246
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 184 DVA E T phpmftkyg NSL LEE ARG E IRN LE NVIQSQ R GQIE ELE HLA E I L KT --- Q L RRKENEI E LSLLQ LRE QQ A TDQ R S 260
Cdd:TIGR02168 247 ELK E A --------- EEE LEE LTA E LQE LE EKLEEL R LEVS ELE EEI E E L QK ely A L ANEISRL E QQKQI LRE RL A NLE R Q 317
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 261 NIRDNVEMIK L HKQ L V E KSNA L SAM E G K FIQ L Q E KQRT L RISHDA L M A NGD EL NMQ L K E QRLKCCS L EKQLHSMKFSER - 339
Cdd:TIGR02168 318 LEELEAQLEE L ESK L D E LAEE L AEL E E K LEE L K E ELES L EAELEE L E A ELE EL ESR L E E LEEQLET L RSKVAQLELQIA s 397
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 340 --- R IE E L QD R IND LE KE RE L L KEN ydklydsafsa AH E EQW KL K E QQ LK VQI A Q LE T alksdltd KT E I L DR L KT E RGA 416
Cdd:TIGR02168 398 lnn E IE R L EA R LER LE DR RE R L QQE ----------- IE E LLK KL E E AE LK ELQ A E LE E -------- LE E E L EE L QE E LER 458
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462548289 417 L INQN E K L VQ E NR E LQLQYLEQKQQ L DE L KK R IKLY n QENDI N ADEL SE ALLLIKAQKEQKN G D --- LS F L VK VD SE 490
Cdd:TIGR02168 459 L EEAL E E L RE E LE E AEQALDAAERE L AQ L QA R LDSL - ERLQE N LEGF SE GVKALLKNQSGLS G I lgv LS E L IS VD EG 534
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
273-476
1.30e-06
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 50.92
E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 273 KQLV E KSNA L SAMEGKFIQ L QEKQRT L RISHD AL MANGDE L NMQLKEQRLKCCS LE KQ L hsm KFS E RRIE EL QDR I ND L E 352
Cdd:COG4942 20 DAAA E AEAE L EQLQQEIAE L EKELAA L KKEEK AL LKQLAA L ERRIAALARRIRA LE QE L --- AAL E AELA EL EKE I AE L R 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 353 K E R E LL KE NYDK L YDSAFSAAHEEQWK L K --------------- EQQ L KVQIAQLETA L KS DL TDKTEILDR L KT ER GA L 417
Cdd:COG4942 97 A E L E AQ KE ELAE L LRALYRLGRQPPLA L L lspedfldavrrlqy LKY L APARREQAEE L RA DL AELAALRAE L EA ER AE L 176
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462548289 418 INQNEK L VQ E NRE L QLQYL E QKQQ L DE L K K RIKLYNQ E NDINAD E LS E ALL LI KAQKEQ 476
Cdd:COG4942 177 EALLAE L EE E RAA L EALKA E RQKL L AR L E K ELAELAA E LAELQQ E AE E LEA LI ARLEAE 235
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
368-572
3.34e-06
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 49.38
E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 368 S A FS A AHEEQWKLKEQ -- QL KVQ IA Q LE TA L KSDLTDKTEI L DR L KTERGALINQNEKL vqen R E L QLQYLEQKQQ L D EL 445
Cdd:COG4942 13 L A AA A QADAAAEAEAE le QL QQE IA E LE KE L AALKKEEKAL L KQ L AALERRIAALARRI ---- R A L EQELAALEAE L A EL 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 446 K K R I KLYNQ E NDINAD EL S E al LL IKAQKEQKNGD L SF L VKVDS -------- EIN K D L ERSM RE LQATHAETVQ EL EKT R 517
Cdd:COG4942 89 E K E I AELRA E LEAQKE EL A E -- LL RALYRLGRQPP L AL L LSPED fldavrrl QYL K Y L APAR RE QAEELRADLA EL AAL R 166
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2462548289 518 NM L IMQHKINKDYQM E V E AVTRKM E N L QQDYELKVEQYVHL L DIR AA RIHK L EEA 572
Cdd:COG4942 167 AE L EAERAELEALLA E L E EERAAL E A L KAERQKLLARLEKE L AEL AA ELAE L QQE 221
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
291-575
4.97e-06
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 49.55
E-value: 4.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 291 Q L Q E KQRT L RISH - DA L M A NGD EL NMQ L K E QRLKCCS LE KQ L HSM kfs E RRI EEL QDRIND LE K E R E LLKE nyd KL Y DSA 369
Cdd:COG1196 221 E L K E LEAE L LLLK l RE L E A ELE EL EAE L E E LEAELEE LE AE L AEL --- E AEL EEL RLELEE LE L E L E EAQA --- EE Y ELL 294
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 370 FSA A HE EQ WKLKEQQLKVQIAQLETA L KSD L TDKT E I L DR L KT E RGA L INQN E KLVQ E NR E LQLQYL E QKQQ L D E LKKRI 449
Cdd:COG1196 295 AEL A RL EQ DIARLEERRRELEERLEE L EEE L AELE E E L EE L EE E LEE L EEEL E EAEE E LE E AEAELA E AEEA L L E AEAEL 374
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 450 klyn Q E NDINAD EL S E A LL LIKAQKEQKNGD L SF L VKVDSEINKD LER s MR E LQATHA E TVQ ELE KTRNMLIMQHKINKD 529
Cdd:COG1196 375 ---- A E AEEELE EL A E E LL EALRAAAELAAQ L EE L EEAEEALLER LER - LE E ELEELE E ALA ELE EEEEEEEEALEEAAE 449
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2462548289 530 YQM E V E AVTRKMEN L QQDYELKVEQYVHL L DIRAARIHKLEEAVS L 575
Cdd:COG1196 450 EEA E L E EEEEALLE L LAELLEEAALLEAA L AELLEELAEAAARLL L 495
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
216-516
5.22e-06
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 49.68
E-value: 5.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 216 Q SQ R GQI E E L EHLAEI L KTQ LRR K EN EIE lsllqlreq QATDQR S NIRDNVEM I KLHKQLV E KS na LSAMEGKFIQ L Q E K 295
Cdd:TIGR02169 677 Q RL R ERL E G L KRELSS L QSE LRR I EN RLD --------- ELSQEL S DASRKIGE I EKEIEQL E QE -- EEKLKERLEE L E E D 745
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 296 QRT L RISHDALMANGD EL NMQLK E QRLKCCS LE KQ L HSMK -- F S ER RI E E L Q DRIND LE K E R ------------ E L LKEN 361
Cdd:TIGR02169 746 LSS L EQEIENVKSELK EL EARIE E LEEDLHK LE EA L NDLE ar L S HS RI P E I Q AELSK LE E E V sriearlreieq K L NRLT 825
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 362 YD K L Y DSAFSAAHE EQ --- W K LKEQQLKVQ I AQ L ET --- A L KSD L TDKTEI L DR L KTER G A L INQNEK L VQEN REL QLQY 435
Cdd:TIGR02169 826 LE K E Y LEKEIQELQ EQ rid L K EQIKSIEKE I EN L NG kke E L EEE L EELEAA L RD L ESRL G D L KKERDE L EAQL REL ERKI 905
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 436 L E QKQ Q LDELK KR IKLYNQENDINAD ELSE ALLLIKAQK E QKNGD LS f L VK V DS E INK d L E RSM R E L QATHAETV QE L E K 515
Cdd:TIGR02169 906 E E LEA Q IEKKR KR LSELKAKLEALEE ELSE IEDPKGEDE E IPEEE LS - L ED V QA E LQR - V E EEI R A L EPVNMLAI QE Y E E 983
.
gi 2462548289 516 T 516
Cdd:TIGR02169 984 V 984
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
201-448
6.50e-06
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 48.61
E-value: 6.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 LE EARG EI RN LE NVIQSQRGQIEE L EHLAEI L KTQLRRKENE I elsll QLR EQ QATDQRSNIRDN - V E MIK L HKQ L VEKS 279
Cdd:COG4942 29 LE QLQQ EI AE LE KELAALKKEEKA L LKQLAA L ERRIAALARR I ----- RAL EQ ELAALEAELAEL e K E IAE L RAE L EAQK 103
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 280 NA L SAM egkfiq L QEKQ R TL R ISHD AL MANGDELNMQLK eqrlkcc S L EKQLHSMKFSERRI EEL QDRIND L EKE R EL L K 359
Cdd:COG4942 104 EE L AEL ------ L RALY R LG R QPPL AL LLSPEDFLDAVR ------- R L QYLKYLAPARREQA EEL RADLAE L AAL R AE L E 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 360 ENYDK L ydsafsaaheeqwklke QQ L KVQIAQLET AL KSDLTDKTEI L D RL KT E RGA L INQNEK L V QE NR EL QLQYLEQK 439
Cdd:COG4942 171 AERAE L ----------------- EA L LAELEEERA AL EALKAERQKL L A RL EK E LAE L AAELAE L Q QE AE EL EALIARLE 233
....*....
gi 2462548289 440 QQLDELKK R 448
Cdd:COG4942 234 AEAAAAAE R 242
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
215-467
1.29e-04
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 44.91
E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 215 IQSQRGQI E ELEHLA E ILKT Q LRR keneiels L LQL RE QQAT dqrsn IRDNV E MIKLHKQ L VEKSNALS A m EGKFIQ L QE 294
Cdd:COG4913 230 LVEHFDDL E RAHEAL E DARE Q IEL -------- L EPI RE LAER ----- YAAAR E RLAELEY L RAALRLWF A - QRRLEL L EA 295
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 295 KQRT LR ISHDA L M A NGDE L NMQ L KEQ R LKCCS LE K Q L hs MKFSER R I E E L QDR I ND LE K E R E LLKENYDK L YDSA fsaah 374
Cdd:COG4913 296 ELEE LR AELAR L E A ELER L EAR L DAL R EELDE LE A Q I -- RGNGGD R L E Q L ERE I ER LE R E L E ERERRRAR L EALL ----- 368
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 375 eeqwklke QQ L KVQIAQLETALKSDLTDKTEI L DR L KT E RG AL INQNEKLVQEN R E L QLQYL E QKQQLDE L KK R IKLYNQ 454
Cdd:COG4913 369 -------- AA L GLPLPASAEEFAALRAEAAAL L EA L EE E LE AL EEALAEAEAAL R D L RRELR E LEAEIAS L ER R KSNIPA 440
250
....*....|...
gi 2462548289 455 ENDINA D E L S EAL 467
Cdd:COG4913 441 RLLALR D A L A EAL 453
PLN02939
PLN02939 transferase, transferring glycosyl groups
148-515
1.77e-04
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain]
Cd Length: 977
Bit Score: 44.51
E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 148 T PYNNVQS R INTG R RK A NENAGLQECPRKGIKF Q DA D VA etphpmftkygnsl LE EAR G E I R N L E - N VIQSQRGQIEE LE 226
Cdd:PLN02939 91 T SSDDDHN R ASMQ R DE A IAAIDNEQQTNSKDGE Q LS D FQ -------------- LE DLV G M I Q N A E k N ILLLNQARLQA LE 156
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 227 H L AE IL -- K TQ L RR K E N EI E LS L LQLREQQATDQRSN I RDNVEMIK L H K QLV E KSNALSAMEGKFIQ L QEKQRT L R ishd 304
Cdd:PLN02939 157 D L EK IL te K EA L QG K I N IL E MR L SETDARIKLAAQEK I HVEILEEQ L E K LRN E LLIRGATEGLCVHS L SKELDV L K ---- 232
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 305 almangd E L NM Q LK E qrlkccsl EK Q LHSMKFS E rr IE E LQD R IND LEKER E LL KENYDK L y D S A F SA A H E EQW KL KEQ Q 384
Cdd:PLN02939 233 ------- E E NM L LK D -------- DI Q FLKAELI E -- VA E TEE R VFK LEKER S LL DASLRE L - E S K F IV A Q E DVS KL SPL Q 294
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 385 LKVQIAQL E TA lksdltdk TEI LDR LK tergali NQ N EK --- LVQE N RE L qlqyleq KQQL D E L KKRI K LY N -- QENDIN 459
Cdd:PLN02939 295 YDCWWEKV E NL -------- QDL LDR AT ------- NQ V EK aal VLDQ N QD L ------- RDKV D K L EASL K EA N vs KFSSYK 352
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462548289 460 ADE L SEA L L L IKAQKEQKNGDLSFLVKV dseinkd LER S MR E L Q A T HAETVQ E LE K 515
Cdd:PLN02939 353 VEL L QQK L K L LEERLQASDHEIHSYIQL ------- YQE S IK E F Q D T LSKLKE E SK K 401
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
206-508
3.91e-04
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 43.52
E-value: 3.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 206 G E IRN LE NVIQSQRG Q IEE LE HLA E I L KTQLRRK E NEI E lsllqlreqqatdqrsnirdnv E MIK L HKQ L VE K SNA L S am 285
Cdd:TIGR02169 230 K E KEA LE RQKEAIER Q LAS LE EEL E K L TEEISEL E KRL E ---------------------- E IEQ L LEE L NK K IKD L G -- 285
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 286 E GKFIQLQ EK QRT L RISHDA L MANGD E LNMQ L KEQRLKCCS LE KQLHSMK fse RR IEEL QDR I NDLE K E R EL L K E N Y DK L 365
Cdd:TIGR02169 286 E EEQLRVK EK IGE L EAEIAS L ERSIA E KERE L EDAEERLAK LE AEIDKLL --- AE IEEL ERE I EEER K R R DK L T E E Y AE L 362
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 366 ydsafsaaheeqw K LKEQQ L KVQIAQLET --- ALKSD L T D KT E I L DR LK T E RGA L INQNEK L VQ E NRE L QLQYLEQKQQL 442
Cdd:TIGR02169 363 ------------- K EELED L RAELEEVDK efa ETRDE L K D YR E K L EK LK R E INE L KRELDR L QE E LQR L SEELADLNAAI 429
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462548289 443 DELKKR I KLYNQ E NDIN A D E LSEA --- L LLIK A QKEQKNGD L SF L VKVDSEIN K D L ERSM REL QATH A E 508
Cdd:TIGR02169 430 AGIEAK I NELEE E KEDK A L E IKKQ ewk L EQLA A DLSKYEQE L YD L KEEYDRVE K E L SKLQ REL AEAE A Q 498
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
338-571
4.45e-04
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 43.37
E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 338 ERRIEE L QDRIND LE K E RELLK E NYDK L --------- YDS A FSAAH E EQ W KLKE - QQLKVQ IA Q LE TA L K s D L TDKTEI L 407
Cdd:COG4913 609 RAKLAA L EAELAE LE E E LAEAE E RLEA L eaeldalqe RRE A LQRLA E YS W DEID v ASAERE IA E LE AE L E - R L DASSDD L 687
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 408 DR L KTERGA L INQN E K L VQ E NR EL QLQYLEQKQQ L DELKKRIK - L YNQENDINADELS E ALL L IKAQKEQKN GD lsflv K 486
Cdd:COG4913 688 AA L EEQLEE L EAEL E E L EE E LD EL KGEIGRLEKE L EQAEEELD e L QDRLEAAEDLARL E LRA L LEERFAAAL GD ----- A 762
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 487 V DS E INKD LE RSMRE L Q A THAETVQ ELE KTR nmlimq HKI N KDYQM E VEAVTRKM E N L qqdyelkv EQ Y VH LLD - IRAAR 565
Cdd:COG4913 763 V ER E LREN LE ERIDA L R A RLNRAEE ELE RAM ------ RAF N REWPA E TADLDADL E S L -------- PE Y LA LLD r LEEDG 828
....*.
gi 2462548289 566 IHKL EE 571
Cdd:COG4913 829 LPEY EE 834
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
201-455
5.66e-04
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 42.98
E-value: 5.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 L E E ARG E IRNL E NVIQSQRGQIEE L EHLA E I L KTQLRRKEN EI ELSLLQLREQQATDQRSNIR - DNVEMIK L HK QL V E KS 279
Cdd:COG4913 619 L A E LEE E LAEA E ERLEALEAELDA L QERR E A L QRLAEYSWD EI DVASAEREIAELEAELERLD a SSDDLAA L EE QL E E LE 698
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 280 NA L SAM E GKFIQ L QEKQRT L RISHDALMANG DEL NMQ L KEQRLKCCSLEKQ L HSMK F SERRIEELQDRI - ND LE KEREL L 358
Cdd:COG4913 699 AE L EEL E EELDE L KGEIGR L EKELEQAEEEL DEL QDR L EAAEDLARLELRA L LEER F AAALGDAVEREL r EN LE ERIDA L 778
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 359 KENYDKLYDSAFS A AHE -- EQ W KLKEQQ L KVQIA qletalks D L TDKTEI LDRL KTER ga L INQN E KLVQENR E LQLQYL 436
Cdd:COG4913 779 RARLNRAEEELER A MRA fn RE W PAETAD L DADLE -------- S L PEYLAL LDRL EEDG -- L PEYE E RFKELLN E NSIEFV 848
250 260
....*....|....*....|....
gi 2462548289 437 EQ ----- KQQLD E L K K RI KLY N QE 455
Cdd:COG4913 849 AD llskl RRAIR E I K E RI DPL N DS 872
CCDC158
pfam15921 Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...
39-574
5.99e-04
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain]
Cd Length: 1112
Bit Score: 42.80
E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 39 RQAVS RV SR E --- ELE D RFL RL HDE N I L LKQHARKQEDKIKRMA TKL irlvn DKKRY ER VGGGPK R LGRDVEM E EMIE QL 115
Cdd:pfam15921 73 KEHIE RV LE E ysh QVK D LQR RL NES N E L HEKQKFYLRQSVIDLQ TKL ----- QEMQM ER DAMADI R RRESQSQ E DLRN QL 147
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 116 Q EK VHELE KQNETLKNR L ISAKQ Q LQTQGYRQTPYNN V QSR I NTGRRKAN E NA G lqecpr K G I KFQ D A dvaetphp M F T K 195
Cdd:pfam15921 148 Q NT VHELE AAKCLKEDM L EDSNT Q IEQLRKMMLSHEG V LQE I RSILVDFE E AS G ------ K K I YEH D S -------- M S T M 213
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 196 YGN SL LEEARGEI R N L ENV I QSQR G Q I EEL E HLA E I LK TQLRR K ----------------- E N E I E LSL L QLREQQ A TD Q 258
Cdd:pfam15921 214 HFR SL GSAISKIL R E L DTE I SYLK G R I FPV E DQL E A LK SESQN K ielllqqhqdrieqlis E H E V E ITG L TEKASS A RS Q 293
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 259 RSN I RDNV E M I -- KLHK Q LVEKSNA LS AM E GKFI QL QEKQ R TLRISHDALM ang D EL NM Q -- L KEQR L KCCSL E KQLH S M 334
Cdd:pfam15921 294 ANS I QSQL E I I qe QARN Q NSMYMRQ LS DL E STVS QL RSEL R EAKRMYEDKI --- E EL EK Q lv L ANSE L TEART E RDQF S Q 370
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 335 K f S ERRIEE LQ DRIN DL --- EKE RE L L KE NYDK L Y D ---- SAFSAA H EEQ w K L KEQQLK VQ ia Q LE TA LK sdl TD K T E IL 407
Cdd:pfam15921 371 E - S GNLDDQ LQ KLLA DL hkr EKE LS L E KE QNKR L W D rdtg NSITID H LRR - E L DDRNME VQ -- R LE AL LK --- AM K S E CQ 443
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 408 DRLKTERG A LINQ NE K L v QENRE L QL Q YLEQ K QQ L DEL ----- K K RIK L YNQ E NDIN ad E L SEA L LLIKAQK E QK N GDLS 482
Cdd:pfam15921 444 GQMERQMA A IQGK NE S L - EKVSS L TA Q LEST K EM L RKV veelt A K KMT L ESS E RTVS -- D L TAS L QEKERAI E AT N AEIT 520
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 483 F L - VK VD SEIN ----- K DLERSM R EL Q A - TH A ETV Q EL EK TRNML I MQHK I NKDY Q ----------- M E VE AV tr KM E NL 544
Cdd:pfam15921 521 K L r SR VD LKLQ elqhl K NEGDHL R NV Q T e CE A LKL Q MA EK DKVIE I LRQQ I ENMT Q lvgqhgrtaga M Q VE KA -- QL E KE 598
570 580 590
....*....|....*....|....*....|
gi 2462548289 545 QQ D YE L KVEQYVH L L D IRA A R I HK LE EA VS 574
Cdd:pfam15921 599 IN D RR L ELQEFKI L K D KKD A K I RE LE AR VS 628
GumC
COG3206 Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
208-365
1.25e-03
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain]
Cd Length: 687
Bit Score: 41.93
E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 208 IRN L ENVIQSQRG Q IE ELE hl AEILKTQLRRK E N E IE L SL L QLREQQAT D QRSNIRDNVEMIK L HK QL V E KSNA L SAMEG 287
Cdd:COG3206 207 LVD L SEEAKLLLQ Q LS ELE -- SQLAEARAELA E A E AR L AA L RAQLGSGP D ALPELLQSPVIQQ L RA QL A E LEAE L AELSA 284
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 288 KF ------- I Q L QEKQRT LR ISHDALMANG - DE L NMQ L KEQRLKCC SL EK QL HSMKFSERRIE EL QDRIND LE K E R E LLK 359
Cdd:COG3206 285 RY tpnhpdv I A L RAQIAA LR AQLQQEAQRI l AS L EAE L EALQAREA SL QA QL AQLEARLAELP EL EAELRR LE R E V E VAR 364
....*.
gi 2462548289 360 E N Y DK L 365
Cdd:COG3206 365 E L Y ES L 370
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
339-518
1.60e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 41.44
E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 339 RR I E EL QD R INDLEKEREL L KE n YDKLYDSA F SAAHE E QWKLKEQQ L KVQI A Q LE TA --- L KSD L TDKT E I LD R L KTERG 415
Cdd:COG4913 255 EP I R EL AE R YAAARERLAE L EY - LRAALRLW F AQRRL E LLEAELEE L RAEL A R LE AE ler L EAR L DALR E E LD E L EAQIR 333
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 416 ALINQN - E K L VQ E NRE L QLQYL E QKQQLDE L KKRIKLYNQENDIN A D E LSEALLLIK A QK E QKNGD L SF L VKVDS E INKD 494
Cdd:COG4913 334 GNGGDR l E Q L ER E IER L ERELE E RERRRAR L EALLAALGLPLPAS A E E FAALRAEAA A LL E ALEEE L EA L EEALA E AEAA 413
170 180
....*....|....*....|....
gi 2462548289 495 L ERSM REL QATH AE t VQE LE KTRN 518
Cdd:COG4913 414 L RDLR REL RELE AE - IAS LE RRKS 436
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
324-542
1.63e-03
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 40.90
E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 324 CCSLEK Q LHSMKFS E RRI E E LQ DR I ND LEKE REL LK ENYDK L YDSA fs AA H E EQWKLKEQQLKV --- QI A Q LE TA L KSDL 400
Cdd:COG4942 12 ALAAAA Q ADAAAEA E AEL E Q LQ QE I AE LEKE LAA LK KEEKA L LKQL -- AA L E RRIAALARRIRA leq EL A A LE AE L AELE 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 401 TDKT E ILDR L KTERGA L INQNEK L VQEN R ELQ L QY L EQKQQLDELKK R IKLYNQENDINADELS E ------ A L LLIK A QK 474
Cdd:COG4942 90 KEIA E LRAE L EAQKEE L AELLRA L YRLG R QPP L AL L LSPEDFLDAVR R LQYLKYLAPARREQAE E lradla E L AALR A EL 169
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462548289 475 E QKNGD L SF L VKVDS E INKD LE RSMR E L Q ATH A ETVQ EL EKTRNM L IMQHKINKDYQMEVEAVTRKME 542
Cdd:COG4942 170 E AERAE L EA L LAELE E ERAA LE ALKA E R Q KLL A RLEK EL AELAAE L AELQQEAEELEALIARLEAEAA 237
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
47-321
2.09e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.20
E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 47 REELE DRFLR L HDENIL L KQHARKQEDKIKRMATKLIRLVNDKKRY E RVGGGPKR L GRDV - EM E EMIEQ L Q E KVHE LE K Q 125
Cdd:TIGR02168 238 REELE ELQEE L KEAEEE L EELTAELQELEEKLEELRLEVSELEEEI E ELQKELYA L ANEI s RL E QQKQI L R E RLAN LE R Q 317
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 126 N E T L KNR L ISAKQQ L QTQGYR ---- QTPYNNVQSRINTGRRKAN E NAGLQ E CPRKGIKFQDA dvaetphpmftkygns L L 201
Cdd:TIGR02168 318 L E E L EAQ L EELESK L DELAEE lael EEKLEELKEELESLEAELE E LEAEL E ELESRLEELEE ---------------- Q L 381
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 202 E EA R GEIRN LE NV I Q S QRGQ IE E LE HLA E I L KTQLR R KEN EIE LS L LQ L R E QQATDQRSNIRDNV E MI - K L HKQ L VEKSN 280
Cdd:TIGR02168 382 E TL R SKVAQ LE LQ I A S LNNE IE R LE ARL E R L EDRRE R LQQ EIE EL L KK L E E AELKELQAELEELE E EL e E L QEE L ERLEE 461
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2462548289 281 AL SAMEGKFIQLQEKQRTLRISHDA L M A NG D E L NMQLKEQR 321
Cdd:TIGR02168 462 AL EELREELEEAEQALDAAERELAQ L Q A RL D S L ERLQENLE 502
ClpA
COG0542 ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ...
341-458
3.65e-03
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain]
Cd Length: 836
Bit Score: 40.45
E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 341 IE EL QD R IND LE K E R E L LK ENY D KL ydsaf S AAHEEQWKLKEQQ L KVQIAQ L ETALKSD ltdk T E ILDRLKTERGA L INQ 420
Cdd:COG0542 413 LD EL ER R LEQ LE I E K E A LK KEQ D EA ----- S FERLAELRDELAE L EEELEA L KARWEAE ---- K E LIEEIQELKEE L EQR 483
90 100 110
....*....|....*....|....*....|....*...
gi 2462548289 421 NE K LVQENR EL Q lqyl E QKQQ L D EL KKRIKLYNQ E N DI 458
Cdd:COG0542 484 YG K IPELEK EL A ---- E LEEE L A EL APLLREEVT E E DI 517
GumC
COG3206 Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
335-517
3.82e-03
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain]
Cd Length: 687
Bit Score: 40.00
E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 335 K F S E RRIE EL QDRINDL E KER E LLKENYD -------- KL YDSAF S AAHEEQWKLKEQ -- QLKVQI A Q L ETA L K S DLTDKT 404
Cdd:COG3206 178 E F L E EQLP EL RKELEEA E AAL E EFRQKNG lvdlseea KL LLQQL S ELESQLAEARAE la EAEARL A A L RAQ L G S GPDALP 257
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 405 E I L D rl KTERGA L IN Q NEK L VQ E NR EL QLQ Y LEQ ------- KQ Q LDE L KKRIK ---- LYNQENDINADE L SEALLLIK AQ 473
Cdd:COG3206 258 E L L Q -- SPVIQQ L RA Q LAE L EA E LA EL SAR Y TPN hpdvial RA Q IAA L RAQLQ qeaq RILASLEAELEA L QAREASLQ AQ 335
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2462548289 474 KE Q KNGD L SF L VKVDS E IN k D LER SMRELQATHAETV Q E LE KT R 517
Cdd:COG3206 336 LA Q LEAR L AE L PELEA E LR - R LER EVEVARELYESLL Q R LE EA R 378
CCDC158
pfam15921 Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...
107-396
4.38e-03
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain]
Cd Length: 1112
Bit Score: 40.10
E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 107 E M E EMIE Q LQ EK VHEL E KQNETLK N RLISAK Q QLQ T Q G YR Q TPYNNVQSR IN TG R RKAN E NAG L QECPRKG I KFQD A D V A 186
Cdd:pfam15921 549 E C E ALKL Q MA EK DKVI E ILRQQIE N MTQLVG Q HGR T A G AM Q VEKAQLEKE IN DR R LELQ E FKI L KDKKDAK I RELE A R V S 628
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 187 -- E TPHPMFTKY G NSL L EEARG --- E IRN L E N VIQSQ R GQIEE L EHLA E I LK TQL R R K EN E I E LSLLQ L RE Q QATD Q rsn 261
Cdd:pfam15921 629 dl E LEKVKLVNA G SER L RAVKD ikq E RDQ L L N EVKTS R NELNS L SEDY E V LK RNF R N K SE E M E TTTNK L KM Q LKSA Q --- 705
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 262 irdnvemiklh KQ L VEKS N A L SA MEG kfiqlqekqrtlrishdalm AN G DELNMQLKE Q R l KCCSLEK Q LHSM kfs ERR I 341
Cdd:pfam15921 706 ----------- SE L EQTR N T L KS MEG -------------------- SD G HAMKVAMGM Q K - QITAKRG Q IDAL --- QSK I 750
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462548289 342 EE L QDRINDLE KE REL LKE NYD KL YDSAFSA A H E -------- E QWKLK E QQ LK VQI A QL E T AL 396
Cdd:pfam15921 751 QF L EEAMTNAN KE KHF LKE EKN KL SQELSTV A T E knkmagel E VLRSQ E RR LK EKV A NM E V AL 813
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
201-574
9.49e-03
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 38.98
E-value: 9.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 201 L EE ARG E IRN L ENVIQSQRGQI EELE HLA E I L KTQ L RRK E NEIE L SL L QLREQQATDQRSNIRDNV E MIKLH - KQ L V E KS 279
Cdd:COG4717 83 A EE KEE E YAE L QEELEELEEEL EELE AEL E E L REE L EKL E KLLQ L LP L YQELEALEAELAELPERL E ELEER l EE L R E LE 162
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 280 NA L SAM E GKFIQ LQE KQRT L RISHDALMAN gdelnmqlkeqrlkcc S L EKQLHSMKFSER R IE EL QDRINDLEK E R E L L K 359
Cdd:COG4717 163 EE L EEL E AELAE LQE ELEE L LEQLSLATEE ---------------- E L QDLAEELEELQQ R LA EL EEELEEAQE E L E E L E 226
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 360 E NYDK L YDSAFS AA H EE QW K LKEQQ L KV -- QIAQ L ETALK S D L TDKTE I LDR L KTER G A L I ------- NQNEK L VQ E NR E 430
Cdd:COG4717 227 E ELEQ L ENELEA AA L EE RL K EARLL L LI aa ALLA L LGLGG S L L SLILT I AGV L FLVL G L L A llfllla REKAS L GK E AE E 306
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462548289 431 LQ LQYLEQKQQLD EL KKRIKLYNQEN D INAD EL S E A L LL I KAQK E Q kngd L SFLVKVDS E I nk D LE RSMR E LQ A TH AE TV 510
Cdd:COG4717 307 LQ ALPALEELEEE EL EELLAALGLPP D LSPE EL L E L L DR I EELQ E L ---- L REAEELEE E L -- Q LE ELEQ E IA A LL AE AG 380
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462548289 511 Q E L E KTRNMLIM Q HKINKDYQM E V E AVTRKM E N L qq DY EL KVEQYVHLLDIRAARIHK LEE AVS 574
Cdd:COG4717 381 V E D E EELRAALE Q AEEYQELKE E L E ELEEQL E E L -- LG EL EELLEALDEEELEEELEE LEE ELE 442
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
