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Conserved domains on  [gi|2462529176|ref|XP_054226684|]
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leucine-rich colipase-like protein 1 isoform X1 [Homo sapiens]

Protein Classification

Colipase-like domain-containing protein( domain architecture ID 10633407)

Colipase-like domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Colipase-like pfam15083
Colipase-like; This is a family of colipase-like proteins.
 66-153 2.95e-41

Colipase-like; This is a family of colipase-like proteins.


:

Pssm-ID: 464492 [Multi-domain]  Cd Length: 89  Bit Score: 135.06  E-value: 2.95e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462529176  66 KTIFLQCLPWRKPNGYRCSHDSECQSSCCVR-NNSPQELCTPQSVFLQCVPWRKPNGDFCSSHQECHSQCCIQLREYSPF 144
Cdd:pfam15083   1 ETLFLQCLPWRKPNGYHCLKLRECLSQCCLRlRELPEQHCKLRSLFLQCVKWRKPLGQHCLKHRECLSQCCLKLRELSEQ 80


                  ....*....
gi 2462529176 145 RCIPRTGIL 153
Cdd:pfam15083  81 HCLKRTGLL 89
 
Name Accession Description Interval E-value
Colipase-like pfam15083
Colipase-like; This is a family of colipase-like proteins.
 66-153 2.95e-41

Colipase-like; This is a family of colipase-like proteins.


Pssm-ID: 464492 [Multi-domain]  Cd Length: 89  Bit Score: 135.06  E-value: 2.95e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462529176  66 KTIFLQCLPWRKPNGYRCSHDSECQSSCCVR-NNSPQELCTPQSVFLQCVPWRKPNGDFCSSHQECHSQCCIQLREYSPF 144
Cdd:pfam15083   1 ETLFLQCLPWRKPNGYHCLKLRECLSQCCLRlRELPEQHCKLRSLFLQCVKWRKPLGQHCLKHRECLSQCCLKLRELSEQ 80


                  ....*....
gi 2462529176 145 RCIPRTGIL 153
Cdd:pfam15083  81 HCLKRTGLL 89
 
Name Accession Description Interval E-value
Colipase-like pfam15083
Colipase-like; This is a family of colipase-like proteins.
 66-153 2.95e-41

Colipase-like; This is a family of colipase-like proteins.


Pssm-ID: 464492 [Multi-domain]  Cd Length: 89  Bit Score: 135.06  E-value: 2.95e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462529176  66 KTIFLQCLPWRKPNGYRCSHDSECQSSCCVR-NNSPQELCTPQSVFLQCVPWRKPNGDFCSSHQECHSQCCIQLREYSPF 144
Cdd:pfam15083   1 ETLFLQCLPWRKPNGYHCLKLRECLSQCCLRlRELPEQHCKLRSLFLQCVKWRKPLGQHCLKHRECLSQCCLKLRELSEQ 80


                  ....*....
gi 2462529176 145 RCIPRTGIL 153
Cdd:pfam15083  81 HCLKRTGLL 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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