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Conserved domains on  [gi|2462519271|ref|XP_054221878|]
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testis-expressed protein 36 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HDNR super family cl20984
Domain of unknown function with conserved HDNR motif; This family of proteins is found in ...
 1-90 4.65e-51

Domain of unknown function with conserved HDNR motif; This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 219 amino acids in length. There is a conserved HDNR sequence motif. The function is not known.


The actual alignment was detected with superfamily member pfam15115:

Pssm-ID: 464512  Cd Length: 177  Bit Score: 158.43  E-value: 4.65e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462519271   1 MTKGRRFNPPSDKDGRWFPHIGLTQKTPESITSATSKEPQSPHLPRQAEGKLPPIYKVREKQAVNNQFPFSVHDNRHSLE 80
Cdd:pfam15115   1 MAKGRRFNPPLDKDGRWFPHIGFTQRHPESSTGAMLKEPFSPRLSPQVEGKLPPIYKNREKQAVNNNFPFSVHDNRHSLQ 80

                          90
                  ....*....|
gi 2462519271  81 NSGCYLDSEL 90
Cdd:pfam15115  81 NSGEYFDSGL 90
 
Name Accession Description Interval E-value
HDNR pfam15115
Domain of unknown function with conserved HDNR motif; This family of proteins is found in ...
 1-90 4.65e-51

Domain of unknown function with conserved HDNR motif; This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 219 amino acids in length. There is a conserved HDNR sequence motif. The function is not known.


Pssm-ID: 464512  Cd Length: 177  Bit Score: 158.43  E-value: 4.65e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462519271   1 MTKGRRFNPPSDKDGRWFPHIGLTQKTPESITSATSKEPQSPHLPRQAEGKLPPIYKVREKQAVNNQFPFSVHDNRHSLE 80
Cdd:pfam15115   1 MAKGRRFNPPLDKDGRWFPHIGFTQRHPESSTGAMLKEPFSPRLSPQVEGKLPPIYKNREKQAVNNNFPFSVHDNRHSLQ 80

                          90
                  ....*....|
gi 2462519271  81 NSGCYLDSEL 90
Cdd:pfam15115  81 NSGEYFDSGL 90
 
Name Accession Description Interval E-value
HDNR pfam15115
Domain of unknown function with conserved HDNR motif; This family of proteins is found in ...
 1-90 4.65e-51

Domain of unknown function with conserved HDNR motif; This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 219 amino acids in length. There is a conserved HDNR sequence motif. The function is not known.


Pssm-ID: 464512  Cd Length: 177  Bit Score: 158.43  E-value: 4.65e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462519271   1 MTKGRRFNPPSDKDGRWFPHIGLTQKTPESITSATSKEPQSPHLPRQAEGKLPPIYKVREKQAVNNQFPFSVHDNRHSLE 80
Cdd:pfam15115   1 MAKGRRFNPPLDKDGRWFPHIGFTQRHPESSTGAMLKEPFSPRLSPQVEGKLPPIYKNREKQAVNNNFPFSVHDNRHSLQ 80

                          90
                  ....*....|
gi 2462519271  81 NSGCYLDSEL 90
Cdd:pfam15115  81 NSGEYFDSGL 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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