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Conserved domains on  [gi|2462614339|ref|XP_054214169|]
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laminin subunit beta-1 isoform X2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Laminin_N pfam00055
Laminin N-terminal (Domain VI);
35-269 7.88e-109

Laminin N-terminal (Domain VI);


:

Pssm-ID: 459653  Cd Length: 230  Bit Score: 340.33  E-value: 7.88e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   35 CYPATGDLLIGRaqKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICNSQDPYHetlnpdSHLIENVVTTFAPNRLKiWWQS 114
Cdd:pfam00055    1 CYPAFGNLAFGR--EVSATSTCGLNGPERYCILSGLEGGKKCFICDSRDPHN------SHPPSNLTDSNNGTNET-WWQS 71

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  115 ENGV---ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASFpGISTGPMK--KVDDII 189
Cdd:pfam00055   72 ETGViqyENVNLTLDLGKEFHFTYLILKFKSPRPAAMVLERSTDFGKTWQPYQYFASDCRRTF-GRPSGPSRgiKDDEVI 150

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  190 CDSRYSDIEPSTEGEVIFRAL--DPAFKIEDpYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIReKYYYAVYDMVV 267
Cdd:pfam00055  151 CTSEYSDISPLTGGEVIFSTLegRPSANIFD-YSPELQDWLTATNIRIRLLRLHTLGDELLDDPSVLR-KYYYAISDISV 228


                   ..
gi 2462614339  268 RG 269
Cdd:pfam00055  229 GG 230
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 821-869 5.15e-14

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 67.38  E-value: 5.15e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  821 CECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPSCQPCQC 869
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
773-818 3.55e-13

Laminin-type epidermal growth factor-like domai;


:

Pssm-ID: 214543  Cd Length: 46  Bit Score: 64.64  E-value: 3.55e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2462614339   773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGC 818
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPGC 46
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 1084-1131 1.22e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 54.67  E-value: 1.22e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 2462614339 1084 CNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRD 1131
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQG 48
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 457-508 2.23e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


:

Pssm-ID: 238012  Cd Length: 50  Bit Score: 54.28  E-value: 2.23e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2462614339  457 SCACNPLGTIPGGnpCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCR 508
Cdd:cd00055      1 PCDCNGHGSLSGQ--CDPGTGQCECKPNTTGRRCDRCAPGYYGLPSQGGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 398-455 3.49e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 53.51  E-value: 3.49e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2462614339  398 CTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGC 455
Cdd:pfam00053    1 CDCNPHGSLS-DTCDPET--------GQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 509-548 9.70e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


:

Pssm-ID: 238012  Cd Length: 50  Bit Score: 52.36  E-value: 9.70e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 2462614339  509 PCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYY 40
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 1028-1082 1.37e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 51.97  E-value: 1.37e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339 1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCD 1082
Cdd:pfam00053    1 CDCNPHGSLSD-------TCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQG 48
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 867-914 5.11e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 50.43  E-value: 5.11e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462614339  867 CQCNGHA---DDCDPVTGECLnCQDYTMGHNCERCLAGYYGDPiIGSGDHC 914
Cdd:pfam00053    1 CDCNPHGslsDTCDPETGQCL-CKPGVTGRHCDRCKPGYYGLP-SDPPQGC 49
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 976-1020 1.12e-05

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 43.50  E-value: 1.12e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2462614339  976 CQCHNNIDTTDPeaCDKETGRCLkCLYHTEGEHCQFCRFGYYGDA 1020
Cdd:pfam00053    1 CDCNPHGSLSDT--CDPETGQCL-CKPGVTGRHCDRCKPGYYGLP 42
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 917-973 1.57e-04

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


:

Pssm-ID: 395007  Cd Length: 49  Bit Score: 40.41  E-value: 1.57e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2462614339  917 CPCPDGPDSGRQfarsCyqDPVTLQlaCVCDPGYIGSRCDDCASGYFGNPSEVGGSC 973
Cdd:pfam00053    1 CDCNPHGSLSDT----C--DPETGQ--CLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 271-323 2.52e-04

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


:

Pssm-ID: 238012  Cd Length: 50  Bit Score: 40.03  E-value: 2.52e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462614339  271 CFCYGHASECAPVDgfneevegMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP 323
Cdd:cd00055      2 CDCNGHGSLSGQCD--------PGTGQCECKPNTTGRRCDRCAPGYYGLPSQG 46
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 335-387 2.98e-04

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


:

Pssm-ID: 238012  Cd Length: 50  Bit Score: 39.64  E-value: 2.98e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2462614339  335 CNCNEH---SISCHFDmavylatgnvsGGVCDdCQHNTMGRNCEQCKPFYYQHPER 387
Cdd:cd00055      2 CDCNGHgslSGQCDPG-----------TGQCE-CKPNTTGRRCDRCAPGYYGLPSQ 45
 
Name Accession Description Interval E-value
Laminin_N pfam00055
Laminin N-terminal (Domain VI);
35-269 7.88e-109

Laminin N-terminal (Domain VI);


Pssm-ID: 459653  Cd Length: 230  Bit Score: 340.33  E-value: 7.88e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   35 CYPATGDLLIGRaqKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICNSQDPYHetlnpdSHLIENVVTTFAPNRLKiWWQS 114
Cdd:pfam00055    1 CYPAFGNLAFGR--EVSATSTCGLNGPERYCILSGLEGGKKCFICDSRDPHN------SHPPSNLTDSNNGTNET-WWQS 71

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  115 ENGV---ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASFpGISTGPMK--KVDDII 189
Cdd:pfam00055   72 ETGViqyENVNLTLDLGKEFHFTYLILKFKSPRPAAMVLERSTDFGKTWQPYQYFASDCRRTF-GRPSGPSRgiKDDEVI 150

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  190 CDSRYSDIEPSTEGEVIFRAL--DPAFKIEDpYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIReKYYYAVYDMVV 267
Cdd:pfam00055  151 CTSEYSDISPLTGGEVIFSTLegRPSANIFD-YSPELQDWLTATNIRIRLLRLHTLGDELLDDPSVLR-KYYYAISDISV 228


                   ..
gi 2462614339  268 RG 269
Cdd:pfam00055  229 GG 230
LamNT smart00136
Laminin N-terminal domain (domain VI); N-terminal domain of laminins and laminin-related ...
 29-269 4.81e-82

Laminin N-terminal domain (domain VI); N-terminal domain of laminins and laminin-related protein such as Unc-6/ netrins.


Pssm-ID: 214532  Cd Length: 238  Bit Score: 267.69  E-value: 4.81e-82
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339    29 GCAEGSCYPATGDLLIGRaqKLSVTSTCGLHKPEPYCI-VSHLQEDKKCFICNSQDPYHetlnpdSHLIENVVTTFAPNR 107
Cdd:smart00136    1 AGRPRSCYPPFVNLAFGR--EVTATSTCGEPGPERYCKlVGHTEQGKKCDYCDARNPRR------SHPAENLTDGNNPNN 72

                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   108 LKiWWQSEN---GVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSsDFGKTWGVYRYFAYDCEASFPGISTGPMKK 184
Cdd:smart00136   73 PT-WWQSEPlsnGPQNVNLTLDLGKEFHVTYVILKFCSPRPSLWILERS-DFGKTWQPWQYFSSDCRRTFGRPPRGPITK 150

                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   185 V--DDIICDSRYSDIEPSTEGEVIFRALDPAFKIED-PYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYA 261
Cdd:smart00136  151 GneDEVICTSEYSDIVPLEGGEIAFSLLEGRPSATDfDNSPVLQEWVTATNIRVRLTRLRTLGDELMDDRPEVTRRYYYA 230


                    ....*...
gi 2462614339   262 VYDMVVRG 269
Cdd:smart00136  231 ISDIAVGG 238
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 821-869 5.15e-14

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 67.38  E-value: 5.15e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  821 CECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPSCQPCQC 869
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
773-818 3.55e-13

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 64.64  E-value: 3.55e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2462614339   773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGC 818
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPGC 46
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 773-821 1.13e-12

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 63.53  E-value: 1.13e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPC 821
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 772-819 2.92e-12

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 62.37  E-value: 2.92e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2462614339  772 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGF--GPSGCK 819
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLpsQGGGCQ 50
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 820-863 5.87e-11

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 58.52  E-value: 5.87e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 2462614339  820 PCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS 863
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLPS 44
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
821-862 7.19e-10

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 55.40  E-value: 7.19e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 2462614339   821 CECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP 862
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDG 42
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 1084-1131 1.22e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 54.67  E-value: 1.22e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 2462614339 1084 CNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRD 1131
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQG 48
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 457-508 2.23e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 54.28  E-value: 2.23e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2462614339  457 SCACNPLGTIPGGnpCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCR 508
Cdd:cd00055      1 PCDCNGHGSLSGQ--CDPGTGQCECKPNTTGRRCDRCAPGYYGLPSQGGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 458-512 2.53e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 53.90  E-value: 2.53e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339  458 CACNPLGTIPGGnpCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLdgcrPCDC 512
Cdd:pfam00053    1 CDCNPHGSLSDT--CDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDP----PQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 1083-1126 3.21e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 53.51  E-value: 3.21e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 2462614339 1083 PCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPD 1126
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLPS 44
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 398-455 3.49e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 53.51  E-value: 3.49e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2462614339  398 CTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGC 455
Cdd:pfam00053    1 CDCNPHGSLS-DTCDPET--------GQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 509-548 9.70e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 52.36  E-value: 9.70e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 2462614339  509 PCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYY 40
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 1028-1082 1.37e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 51.97  E-value: 1.37e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339 1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCD 1082
Cdd:pfam00053    1 CDCNPHGSLSD-------TCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQG 48
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
1084-1129 1.45e-08

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 51.54  E-value: 1.45e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2462614339  1084 CNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVEC 1129
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPGC 46
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
510-554 1.89e-08

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 51.54  E-value: 1.89e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2462614339   510 CDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYYFATLDH 554
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPG 45
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 867-914 5.11e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 50.43  E-value: 5.11e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462614339  867 CQCNGHA---DDCDPVTGECLnCQDYTMGHNCERCLAGYYGDPiIGSGDHC 914
Cdd:pfam00053    1 CDCNPHGslsDTCDPETGQCL-CKPGVTGRHCDRCKPGYYGLP-SDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
458-501 7.02e-08

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 49.62  E-value: 7.02e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2462614339   458 CACNPLGTIpgGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLS 501
Cdd:smart00180    1 CDCDPGGSA--SGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDG 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 866-911 8.05e-08

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 49.66  E-value: 8.05e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  866 PCQCNGHAD---DCDPVTGECLnCQDYTMGHNCERCLAGYYGDPIIGSG 911
Cdd:cd00055      1 PCDCNGHGSlsgQCDPGTGQCE-CKPNTTGRRCDRCAPGYYGLPSQGGG 48
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
1028-1081 1.51e-07

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 48.85  E-value: 1.51e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 2462614339  1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQlASGTGC 1081
Cdd:smart00180    1 CDCDPGGSASG-------TCDPDTGQCECKPNVTGRRCDRCAPGYYG-DGPPGC 46
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 1028-1081 1.55e-07

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 48.89  E-value: 1.55e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339 1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQLAS-GTGC 1081
Cdd:cd00055      2 CDCNGHGSLSG-------QCDPGTGQCECKPNTTGRRCDRCAPGYYGLPSqGGGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 397-456 1.38e-06

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 46.19  E-value: 1.38e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  397 RCTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSeDPFGCK 456
Cdd:cd00055      1 PCDCNGHGSLS-GQCDPGT--------GQCECKPNTTGRRCDRCAPGYYGLPS-QGGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 510-548 2.18e-06

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 45.81  E-value: 2.18e-06
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 2462614339  510 CDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYY 39
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
398-451 1.06e-05

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 43.45  E-value: 1.06e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 2462614339   398 CTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSED 451
Cdd:smart00180    1 CDCDPGGSAS-GTCDPDT--------GQCECKPNVTGRRCDRCAPGYYGDGPPG 45
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 976-1020 1.12e-05

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 43.50  E-value: 1.12e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2462614339  976 CQCHNNIDTTDPeaCDKETGRCLkCLYHTEGEHCQFCRFGYYGDA 1020
Cdd:pfam00053    1 CDCNPHGSLSDT--CDPETGQCL-CKPGVTGRHCDRCKPGYYGLP 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 975-1026 4.93e-05

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 41.96  E-value: 4.93e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462614339  975 PCQCHNNIDTtdPEACDKETGRCLkCLYHTEGEHCQFCRFGYYGDALR-QDCR 1026
Cdd:cd00055      1 PCDCNGHGSL--SGQCDPGTGQCE-CKPNTTGRRCDRCAPGYYGLPSQgGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 917-973 1.57e-04

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 40.41  E-value: 1.57e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2462614339  917 CPCPDGPDSGRQfarsCyqDPVTLQlaCVCDPGYIGSRCDDCASGYFGNPSEVGGSC 973
Cdd:pfam00053    1 CDCNPHGSLSDT----C--DPETGQ--CLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
867-906 1.82e-04

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 39.99  E-value: 1.82e-04
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2462614339   867 CQCN--GHADD-CDPVTGECLnCQDYTMGHNCERCLAGYYGDP 906
Cdd:smart00180    1 CDCDpgGSASGtCDPDTGQCE-CKPNVTGRRCDRCAPGYYGDG 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 271-323 2.52e-04

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 40.03  E-value: 2.52e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462614339  271 CFCYGHASECAPVDgfneevegMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP 323
Cdd:cd00055      2 CDCNGHGSLSGQCD--------PGTGQCECKPNTTGRRCDRCAPGYYGLPSQG 46
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 335-387 2.98e-04

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 39.64  E-value: 2.98e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2462614339  335 CNCNEH---SISCHFDmavylatgnvsGGVCDdCQHNTMGRNCEQCKPFYYQHPER 387
Cdd:cd00055      2 CDCNGHgslSGQCDPG-----------TGQCE-CKPNTTGRRCDRCAPGYYGLPSQ 45
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 335-385 3.54e-04

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 39.26  E-value: 3.54e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462614339  335 CNCNEHSISChfdmavylATGNVSGGVCDdCQHNTMGRNCEQCKPFYYQHP 385
Cdd:pfam00053    1 CDCNPHGSLS--------DTCDPETGQCL-CKPGVTGRHCDRCKPGYYGLP 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 916-971 1.28e-03

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 37.72  E-value: 1.28e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2462614339  916 PCPCPDGPDSGRQfarsCyqDPVTLQlaCVCDPGYIGSRCDDCASGYFGNPSEVGG 971
Cdd:cd00055      1 PCDCNGHGSLSGQ----C--DPGTGQ--CECKPNTTGRRCDRCAPGYYGLPSQGGG 48
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
976-1019 2.87e-03

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 36.91  E-value: 2.87e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2462614339   976 CQCHNniDTTDPEACDKETGRCLkCLYHTEGEHCQFCRFGYYGD 1019
Cdd:smart00180    1 CDCDP--GGSASGTCDPDTGQCE-CKPNVTGRRCDRCAPGYYGD 41
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
356-388 4.84e-03

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 36.14  E-value: 4.84e-03
                            10        20        30
                    ....*....|....*....|....*....|...
gi 2462614339   356 NVSGGVCDdCQHNTMGRNCEQCKPFYYQHPERD 388
Cdd:smart00180   14 DPDTGQCE-CKPNVTGRRCDRCAPGYYGDGPPG 45
 
Name Accession Description Interval E-value
Laminin_N pfam00055
Laminin N-terminal (Domain VI);
35-269 7.88e-109

Laminin N-terminal (Domain VI);


Pssm-ID: 459653  Cd Length: 230  Bit Score: 340.33  E-value: 7.88e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   35 CYPATGDLLIGRaqKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICNSQDPYHetlnpdSHLIENVVTTFAPNRLKiWWQS 114
Cdd:pfam00055    1 CYPAFGNLAFGR--EVSATSTCGLNGPERYCILSGLEGGKKCFICDSRDPHN------SHPPSNLTDSNNGTNET-WWQS 71

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  115 ENGV---ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASFpGISTGPMK--KVDDII 189
Cdd:pfam00055   72 ETGViqyENVNLTLDLGKEFHFTYLILKFKSPRPAAMVLERSTDFGKTWQPYQYFASDCRRTF-GRPSGPSRgiKDDEVI 150

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  190 CDSRYSDIEPSTEGEVIFRAL--DPAFKIEDpYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIReKYYYAVYDMVV 267
Cdd:pfam00055  151 CTSEYSDISPLTGGEVIFSTLegRPSANIFD-YSPELQDWLTATNIRIRLLRLHTLGDELLDDPSVLR-KYYYAISDISV 228


                   ..
gi 2462614339  268 RG 269
Cdd:pfam00055  229 GG 230
LamNT smart00136
Laminin N-terminal domain (domain VI); N-terminal domain of laminins and laminin-related ...
 29-269 4.81e-82

Laminin N-terminal domain (domain VI); N-terminal domain of laminins and laminin-related protein such as Unc-6/ netrins.


Pssm-ID: 214532  Cd Length: 238  Bit Score: 267.69  E-value: 4.81e-82
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339    29 GCAEGSCYPATGDLLIGRaqKLSVTSTCGLHKPEPYCI-VSHLQEDKKCFICNSQDPYHetlnpdSHLIENVVTTFAPNR 107
Cdd:smart00136    1 AGRPRSCYPPFVNLAFGR--EVTATSTCGEPGPERYCKlVGHTEQGKKCDYCDARNPRR------SHPAENLTDGNNPNN 72

                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   108 LKiWWQSEN---GVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSsDFGKTWGVYRYFAYDCEASFPGISTGPMKK 184
Cdd:smart00136   73 PT-WWQSEPlsnGPQNVNLTLDLGKEFHVTYVILKFCSPRPSLWILERS-DFGKTWQPWQYFSSDCRRTFGRPPRGPITK 150

                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339   185 V--DDIICDSRYSDIEPSTEGEVIFRALDPAFKIED-PYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYA 261
Cdd:smart00136  151 GneDEVICTSEYSDIVPLEGGEIAFSLLEGRPSATDfDNSPVLQEWVTATNIRVRLTRLRTLGDELMDDRPEVTRRYYYA 230


                    ....*...
gi 2462614339   262 VYDMVVRG 269
Cdd:smart00136  231 ISDIAVGG 238
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 821-869 5.15e-14

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 67.38  E-value: 5.15e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  821 CECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPSCQPCQC 869
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
773-818 3.55e-13

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 64.64  E-value: 3.55e-13
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2462614339   773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGC 818
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPGC 46
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 773-821 1.13e-12

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 63.53  E-value: 1.13e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPC 821
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 772-819 2.92e-12

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 62.37  E-value: 2.92e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2462614339  772 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGF--GPSGCK 819
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLpsQGGGCQ 50
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 820-863 5.87e-11

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 58.52  E-value: 5.87e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 2462614339  820 PCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS 863
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLPS 44
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
821-862 7.19e-10

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 55.40  E-value: 7.19e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 2462614339   821 CECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP 862
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDG 42
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 1084-1131 1.22e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 54.67  E-value: 1.22e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 2462614339 1084 CNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRD 1131
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQG 48
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 457-508 2.23e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 54.28  E-value: 2.23e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2462614339  457 SCACNPLGTIPGGnpCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCR 508
Cdd:cd00055      1 PCDCNGHGSLSGQ--CDPGTGQCECKPNTTGRRCDRCAPGYYGLPSQGGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 458-512 2.53e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 53.90  E-value: 2.53e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339  458 CACNPLGTIPGGnpCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLdgcrPCDC 512
Cdd:pfam00053    1 CDCNPHGSLSDT--CDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDP----PQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 1083-1126 3.21e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 53.51  E-value: 3.21e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 2462614339 1083 PCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPD 1126
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLPS 44
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 398-455 3.49e-09

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 53.51  E-value: 3.49e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2462614339  398 CTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGC 455
Cdd:pfam00053    1 CDCNPHGSLS-DTCDPET--------GQCLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 509-548 9.70e-09

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 52.36  E-value: 9.70e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 2462614339  509 PCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Cdd:cd00055      1 PCDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYY 40
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 1028-1082 1.37e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 51.97  E-value: 1.37e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339 1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCD 1082
Cdd:pfam00053    1 CDCNPHGSLSD-------TCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPPQG 48
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
1084-1129 1.45e-08

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 51.54  E-value: 1.45e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 2462614339  1084 CNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVEC 1129
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPGC 46
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
510-554 1.89e-08

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 51.54  E-value: 1.89e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2462614339   510 CDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYYFATLDH 554
Cdd:smart00180    1 CDCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPG 45
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 867-914 5.11e-08

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 50.43  E-value: 5.11e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462614339  867 CQCNGHA---DDCDPVTGECLnCQDYTMGHNCERCLAGYYGDPiIGSGDHC 914
Cdd:pfam00053    1 CDCNPHGslsDTCDPETGQCL-CKPGVTGRHCDRCKPGYYGLP-SDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
458-501 7.02e-08

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 49.62  E-value: 7.02e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2462614339   458 CACNPLGTIpgGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLS 501
Cdd:smart00180    1 CDCDPGGSA--SGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDG 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 866-911 8.05e-08

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 49.66  E-value: 8.05e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 2462614339  866 PCQCNGHAD---DCDPVTGECLnCQDYTMGHNCERCLAGYYGDPIIGSG 911
Cdd:cd00055      1 PCDCNGHGSlsgQCDPGTGQCE-CKPNTTGRRCDRCAPGYYGLPSQGGG 48
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
1028-1081 1.51e-07

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 48.85  E-value: 1.51e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 2462614339  1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQlASGTGC 1081
Cdd:smart00180    1 CDCDPGGSASG-------TCDPDTGQCECKPNVTGRRCDRCAPGYYG-DGPPGC 46
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 1028-1081 1.55e-07

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 48.89  E-value: 1.55e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2462614339 1028 CVCNYLGTVQEhcngsdcQCDKATGQCLCLPNVIGQNCDRCAPNTWQLAS-GTGC 1081
Cdd:cd00055      2 CDCNGHGSLSG-------QCDPGTGQCECKPNTTGRRCDRCAPGYYGLPSqGGGC 49
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 397-456 1.38e-06

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 46.19  E-value: 1.38e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462614339  397 RCTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSeDPFGCK 456
Cdd:cd00055      1 PCDCNGHGSLS-GQCDPGT--------GQCECKPNTTGRRCDRCAPGYYGLPS-QGGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 510-548 2.18e-06

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 45.81  E-value: 2.18e-06
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 2462614339  510 CDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Cdd:pfam00053    1 CDCNPHGSLSDTCDPETGQCLCKPGVTGRHCDRCKPGYY 39
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
398-451 1.06e-05

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 43.45  E-value: 1.06e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 2462614339   398 CTCDPAGSQNeGICDSYTdfstgliaGQCRCKLNVEGEHCDVCKEGFYDLSSED 451
Cdd:smart00180    1 CDCDPGGSAS-GTCDPDT--------GQCECKPNVTGRRCDRCAPGYYGDGPPG 45
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 976-1020 1.12e-05

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 43.50  E-value: 1.12e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2462614339  976 CQCHNNIDTTDPeaCDKETGRCLkCLYHTEGEHCQFCRFGYYGDA 1020
Cdd:pfam00053    1 CDCNPHGSLSDT--CDPETGQCL-CKPGVTGRHCDRCKPGYYGLP 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 975-1026 4.93e-05

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 41.96  E-value: 4.93e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462614339  975 PCQCHNNIDTtdPEACDKETGRCLkCLYHTEGEHCQFCRFGYYGDALR-QDCR 1026
Cdd:cd00055      1 PCDCNGHGSL--SGQCDPGTGQCE-CKPNTTGRRCDRCAPGYYGLPSQgGGCQ 50
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 917-973 1.57e-04

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 40.41  E-value: 1.57e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2462614339  917 CPCPDGPDSGRQfarsCyqDPVTLQlaCVCDPGYIGSRCDDCASGYFGNPSEVGGSC 973
Cdd:pfam00053    1 CDCNPHGSLSDT----C--DPETGQ--CLCKPGVTGRHCDRCKPGYYGLPSDPPQGC 49
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
867-906 1.82e-04

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 39.99  E-value: 1.82e-04
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2462614339   867 CQCN--GHADD-CDPVTGECLnCQDYTMGHNCERCLAGYYGDP 906
Cdd:smart00180    1 CDCDpgGSASGtCDPDTGQCE-CKPNVTGRRCDRCAPGYYGDG 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 271-323 2.52e-04

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 40.03  E-value: 2.52e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462614339  271 CFCYGHASECAPVDgfneevegMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP 323
Cdd:cd00055      2 CDCNGHGSLSGQCD--------PGTGQCECKPNTTGRRCDRCAPGYYGLPSQG 46
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 335-387 2.98e-04

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 39.64  E-value: 2.98e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2462614339  335 CNCNEH---SISCHFDmavylatgnvsGGVCDdCQHNTMGRNCEQCKPFYYQHPER 387
Cdd:cd00055      2 CDCNGHgslSGQCDPG-----------TGQCE-CKPNTTGRRCDRCAPGYYGLPSQ 45
Laminin_EGF pfam00053
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.
 335-385 3.54e-04

Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six.


Pssm-ID: 395007  Cd Length: 49  Bit Score: 39.26  E-value: 3.54e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462614339  335 CNCNEHSISChfdmavylATGNVSGGVCDdCQHNTMGRNCEQCKPFYYQHP 385
Cdd:pfam00053    1 CDCNPHGSLS--------DTCDPETGQCL-CKPGVTGRHCDRCKPGYYGLP 42
EGF_Lam cd00055
Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous ...
 916-971 1.28e-03

Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies


Pssm-ID: 238012  Cd Length: 50  Bit Score: 37.72  E-value: 1.28e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2462614339  916 PCPCPDGPDSGRQfarsCyqDPVTLQlaCVCDPGYIGSRCDDCASGYFGNPSEVGG 971
Cdd:cd00055      1 PCDCNGHGSLSGQ----C--DPGTGQ--CECKPNTTGRRCDRCAPGYYGLPSQGGG 48
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
976-1019 2.87e-03

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 36.91  E-value: 2.87e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 2462614339   976 CQCHNniDTTDPEACDKETGRCLkCLYHTEGEHCQFCRFGYYGD 1019
Cdd:smart00180    1 CDCDP--GGSASGTCDPDTGQCE-CKPNVTGRRCDRCAPGYYGD 41
EGF_Lam smart00180
Laminin-type epidermal growth factor-like domai;
356-388 4.84e-03

Laminin-type epidermal growth factor-like domai;


Pssm-ID: 214543  Cd Length: 46  Bit Score: 36.14  E-value: 4.84e-03
                            10        20        30
                    ....*....|....*....|....*....|...
gi 2462614339   356 NVSGGVCDdCQHNTMGRNCEQCKPFYYQHPERD 388
Cdd:smart00180   14 DPDTGQCE-CKPNVTGRRCDRCAPGYYGDGPPG 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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