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Conserved domains on  [gi|2462575243|ref|XP_054198974|]
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probable inactive allantoicase isoform X1 [Homo sapiens]

Protein Classification

allantoicase( domain architecture ID 11496236)

allantoicase catalyzes the conversion from allantoate and H(2)O to (S)-ureidoglycolate and urea

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
allantoicase TIGR02961
allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called ...
67-433 0e+00

allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called allantoate amidinohydrolase. This enzyme hydrolyzes allantoate to (S)-ureidoglycolate and urea; it can also degrade (R)-ureidoglycolate to glyoxylate and urea. Allantoinase (EC 3.5.2.5) hydrolyzes (S)-allantoin (a xanthine metabolite, via urate) to allantoate. Allantoate can then be degraded either by this enzyme, allantoicase, or by allantoate deiminase (EC 3.5.3.9). Members of the seed alignment for this model were taken from BRENDA. Proteins in this family contain two copies of the allantoicase repeat (pfam03561). A different but similarly named enzyme, allantoate amidohydrolase (EC 3.5.3.9), simultaneously breaks down the urea to ammonia and carbon dioxide. [Purines, pyrimidines, nucleosides, and nucleotides, Other, Energy metabolism, Other]


:

Pssm-ID: 274363 [Multi-domain]  Cd Length: 322  Bit Score: 532.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  67 QLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGFDVD 146
Cdd:TIGR02961   1 QLVNLADRRLGGKVLFASDEFFAPAENLLKPEAPEFKPGVFDEFGKWMDGWETRRKRGAGHDWCIVRLGVPGVIHGVDID 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 147 VSYFTGDYAPRVSIQAAnLEEDKLPEIPErgirtgaaatpeefeaiaelKSDDWSYLVPMTELKPgnpaSGHNYFLVNSQ 226
Cdd:TIGR02961  81 TSFFTGNYPPAVSIEAC-LSPEPSPEILL--------------------DSTEWVELLPRTELGP----SQHHYFEVSSK 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 227 QRWTHIRLNIFPDGGIARLRVFGTGQKDWTATDPKEPADLVAIAFGGVCVGFSNAKFGHPNNIIGVGGAKSMADGWETAR 306
Cdd:TIGR02961 136 QRFTHIRLNIYPDGGIARLRVYGIVVPDWSLLDADETVDLAALENGGVVVACSDAHFGHPDNLIGPGRGRNMGDGWETAR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 307 RLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGCILTTQEEAVIrqkwILPAHKWKP 386
Cdd:TIGR02961 216 RRD---------------PGNDWAIVRLGAPGEIERIEVDTAHFKGNYPDSCSLQAADLEGGEDEQL----ITQSMFWVE 276
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 2462575243 387 LLPVTKLSPNQSHLFDSlTLELQDVITHARLTIVPDGGVSRLRLRGF 433
Cdd:TIGR02961 277 LLPRTKLGPDTEHVFES-SLAASGPVTHVRLNIIPDGGVSRLRLWGR 322
 
Name Accession Description Interval E-value
allantoicase TIGR02961
allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called ...
67-433 0e+00

allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called allantoate amidinohydrolase. This enzyme hydrolyzes allantoate to (S)-ureidoglycolate and urea; it can also degrade (R)-ureidoglycolate to glyoxylate and urea. Allantoinase (EC 3.5.2.5) hydrolyzes (S)-allantoin (a xanthine metabolite, via urate) to allantoate. Allantoate can then be degraded either by this enzyme, allantoicase, or by allantoate deiminase (EC 3.5.3.9). Members of the seed alignment for this model were taken from BRENDA. Proteins in this family contain two copies of the allantoicase repeat (pfam03561). A different but similarly named enzyme, allantoate amidohydrolase (EC 3.5.3.9), simultaneously breaks down the urea to ammonia and carbon dioxide. [Purines, pyrimidines, nucleosides, and nucleotides, Other, Energy metabolism, Other]


Pssm-ID: 274363 [Multi-domain]  Cd Length: 322  Bit Score: 532.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  67 QLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGFDVD 146
Cdd:TIGR02961   1 QLVNLADRRLGGKVLFASDEFFAPAENLLKPEAPEFKPGVFDEFGKWMDGWETRRKRGAGHDWCIVRLGVPGVIHGVDID 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 147 VSYFTGDYAPRVSIQAAnLEEDKLPEIPErgirtgaaatpeefeaiaelKSDDWSYLVPMTELKPgnpaSGHNYFLVNSQ 226
Cdd:TIGR02961  81 TSFFTGNYPPAVSIEAC-LSPEPSPEILL--------------------DSTEWVELLPRTELGP----SQHHYFEVSSK 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 227 QRWTHIRLNIFPDGGIARLRVFGTGQKDWTATDPKEPADLVAIAFGGVCVGFSNAKFGHPNNIIGVGGAKSMADGWETAR 306
Cdd:TIGR02961 136 QRFTHIRLNIYPDGGIARLRVYGIVVPDWSLLDADETVDLAALENGGVVVACSDAHFGHPDNLIGPGRGRNMGDGWETAR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 307 RLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGCILTTQEEAVIrqkwILPAHKWKP 386
Cdd:TIGR02961 216 RRD---------------PGNDWAIVRLGAPGEIERIEVDTAHFKGNYPDSCSLQAADLEGGEDEQL----ITQSMFWVE 276
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 2462575243 387 LLPVTKLSPNQSHLFDSlTLELQDVITHARLTIVPDGGVSRLRLRGF 433
Cdd:TIGR02961 277 LLPRTKLGPDTEHVFES-SLAASGPVTHVRLNIIPDGGVSRLRLWGR 322
Alc COG4266
Allantoicase [Nucleotide transport and metabolism];
64-436 1.90e-153

Allantoicase [Nucleotide transport and metabolism];


Pssm-ID: 443407 [Multi-domain]  Cd Length: 331  Bit Score: 438.49  E-value: 1.90e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  64 DFTQLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGF 143
Cdd:COG4266     4 DFTRLVDLASRRLGGSVLAANDEFFAEKENLLKPEPPVFIPGKFGDKGKWMDGWETRRRREPGHDWAIVRLGAPGVIRGV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 144 DVDVSYFTGDYAPRVSIQAANLEEDKLPEipergirtgaaatpeefeaiaELKSDDWSYLVPMTELKPGNpasgHNYFLV 223
Cdd:COG4266    84 DVDTAHFTGNYPPAASVEACSVEGYPDPE---------------------ELADAEWTELLPRSPLGGDS----HNLFEV 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 224 NSQQRWTHIRLNIFPDGGIARLRVFGTGQKDWTATDPKEPADLVAIAFGGVCVGFSNAKFGHPNNIIGVGGAKSMADGWE 303
Cdd:COG4266   139 ASERRWTHVRLNIYPDGGVARLRVYGEPVPDPRLLDAGGLVDLAALENGGRVVACSDMFYGSPSNLLMPGRGRNMGDGWE 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 304 TARRLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGCILTTQEEAVIrqkwILPAHK 383
Cdd:COG4266   219 TRRRRD---------------PGNDWVIVRLAAPGVVERIEVDTAHFKGNAPDRASLQGADAPGGTDASL----ITQSMF 279
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2462575243 384 WKPLLPVTKLSPNQSHLFDslTLELQDVITHARLTIVPDGGVSRLRLRGFPSS 436
Cdd:COG4266   280 WFELLPRTKLQPDTRHRFR--ELAAAGPVTHVRLNIFPDGGVSRLRLFGRLTE 330
PRK13797 PRK13797
allantoicase;
50-435 9.68e-97

allantoicase;


Pssm-ID: 106738 [Multi-domain]  Cd Length: 516  Bit Score: 300.35  E-value: 9.68e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  50 MADAPkegrltrflDFTQLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKR-IPGHD 128
Cdd:PRK13797    1 MSDAP---------DLTNLVDLAAARFGGTVVAVNDEFFAFAERMLLAEPPVVRPGVFTERGQWTDGWETRRRRdLPGAD 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 129 WCVLRLGIQGVIRGFDVDVSYFTGDYAPRVSIQAAnleedklpeipergirtgAAATPEEFEAIAElKSDDWSYLVPMTE 208
Cdd:PRK13797   72 WAIVRLGAPGIAHAVTVDTTHFTGNAPEAVEIHGA------------------TLAGYPSAEDVAD-DSVHWVELVPRTP 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 209 LKPgnpaSGHNYFLVNSQQRW--THIRLNIFPDGGIARLRVFGTGQKDWTATDPKEpADLVAIAFGGVCVGFSNAKFGHP 286
Cdd:PRK13797  133 IAA----DAVNVLPVASSGRLriTHLRLTIHPDGGVARLRVHGTVVPDPRLLDRVT-SDLAAAYLGGVVVAASDMHYGDR 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 287 NNIIGVGGAKSMADGWETARRLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGC--- 363
Cdd:PRK13797  208 HNLNASGDARAMGEGWETRRRRG---------------PGHDWAVVRLATQGTIVRAEVDTRHFRGNAPRAVALWAAdap 272
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462575243 364 -ILTTQEEAVIRQkwilpahkWKPLLPVTKLSPNQSHLFDsltLELQDVITHARLTIVPDGGVSRLRLRGFPS 435
Cdd:PRK13797  273 dLLDPDDLAAITE--------WRPLLPRTRVQPNTRHLFD---LEVPVQATHVRVDAIPDGGLARLRLTGAPT 334
Allantoicase pfam03561
Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of ...
77-252 2.06e-80

Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of the protein. These proteins allow the use of purines as secondary nitrogen sources in nitrogen-limiting conditions through the reaction: allantoate + H(2)0 = (-)-ureidoglycolate + urea.


Pssm-ID: 460972 [Multi-domain]  Cd Length: 150  Bit Score: 245.46  E-value: 2.06e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  77 GGKILFATDDFFAPAENLIKSDsPCFKEheYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGFDVDVSYFTGDYAP 156
Cdd:pfam03561   1 GGKVLSASDEHFAPAENLLLPP-PVFPG--FTEFGGMGDGWETRRRRDPGHDWAIIRLGAPGVIRGIEVDTAHFKGNYPP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 157 RVSIQAANLEEDklpeipergirtgaaatpeefEAIAELKSDDWSYLVPMTELKPGNpasgHNYFLVNS--QQRWTHIRL 234
Cdd:pfam03561  78 SVSVEAAYLPGD---------------------EDEPELDDAGWTELLPRTKLGPDQ----RHFFEVDSltDKRYTHVRL 132
                         170
                  ....*....|....*...
gi 2462575243 235 NIFPDGGIARLRVFGTGQ 252
Cdd:pfam03561 133 NIYPDGGVARLRVYGRVV 150
 
Name Accession Description Interval E-value
allantoicase TIGR02961
allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called ...
67-433 0e+00

allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called allantoate amidinohydrolase. This enzyme hydrolyzes allantoate to (S)-ureidoglycolate and urea; it can also degrade (R)-ureidoglycolate to glyoxylate and urea. Allantoinase (EC 3.5.2.5) hydrolyzes (S)-allantoin (a xanthine metabolite, via urate) to allantoate. Allantoate can then be degraded either by this enzyme, allantoicase, or by allantoate deiminase (EC 3.5.3.9). Members of the seed alignment for this model were taken from BRENDA. Proteins in this family contain two copies of the allantoicase repeat (pfam03561). A different but similarly named enzyme, allantoate amidohydrolase (EC 3.5.3.9), simultaneously breaks down the urea to ammonia and carbon dioxide. [Purines, pyrimidines, nucleosides, and nucleotides, Other, Energy metabolism, Other]


Pssm-ID: 274363 [Multi-domain]  Cd Length: 322  Bit Score: 532.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  67 QLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGFDVD 146
Cdd:TIGR02961   1 QLVNLADRRLGGKVLFASDEFFAPAENLLKPEAPEFKPGVFDEFGKWMDGWETRRKRGAGHDWCIVRLGVPGVIHGVDID 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 147 VSYFTGDYAPRVSIQAAnLEEDKLPEIPErgirtgaaatpeefeaiaelKSDDWSYLVPMTELKPgnpaSGHNYFLVNSQ 226
Cdd:TIGR02961  81 TSFFTGNYPPAVSIEAC-LSPEPSPEILL--------------------DSTEWVELLPRTELGP----SQHHYFEVSSK 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 227 QRWTHIRLNIFPDGGIARLRVFGTGQKDWTATDPKEPADLVAIAFGGVCVGFSNAKFGHPNNIIGVGGAKSMADGWETAR 306
Cdd:TIGR02961 136 QRFTHIRLNIYPDGGIARLRVYGIVVPDWSLLDADETVDLAALENGGVVVACSDAHFGHPDNLIGPGRGRNMGDGWETAR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 307 RLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGCILTTQEEAVIrqkwILPAHKWKP 386
Cdd:TIGR02961 216 RRD---------------PGNDWAIVRLGAPGEIERIEVDTAHFKGNYPDSCSLQAADLEGGEDEQL----ITQSMFWVE 276
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 2462575243 387 LLPVTKLSPNQSHLFDSlTLELQDVITHARLTIVPDGGVSRLRLRGF 433
Cdd:TIGR02961 277 LLPRTKLGPDTEHVFES-SLAASGPVTHVRLNIIPDGGVSRLRLWGR 322
Alc COG4266
Allantoicase [Nucleotide transport and metabolism];
64-436 1.90e-153

Allantoicase [Nucleotide transport and metabolism];


Pssm-ID: 443407 [Multi-domain]  Cd Length: 331  Bit Score: 438.49  E-value: 1.90e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  64 DFTQLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGF 143
Cdd:COG4266     4 DFTRLVDLASRRLGGSVLAANDEFFAEKENLLKPEPPVFIPGKFGDKGKWMDGWETRRRREPGHDWAIVRLGAPGVIRGV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 144 DVDVSYFTGDYAPRVSIQAANLEEDKLPEipergirtgaaatpeefeaiaELKSDDWSYLVPMTELKPGNpasgHNYFLV 223
Cdd:COG4266    84 DVDTAHFTGNYPPAASVEACSVEGYPDPE---------------------ELADAEWTELLPRSPLGGDS----HNLFEV 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 224 NSQQRWTHIRLNIFPDGGIARLRVFGTGQKDWTATDPKEPADLVAIAFGGVCVGFSNAKFGHPNNIIGVGGAKSMADGWE 303
Cdd:COG4266   139 ASERRWTHVRLNIYPDGGVARLRVYGEPVPDPRLLDAGGLVDLAALENGGRVVACSDMFYGSPSNLLMPGRGRNMGDGWE 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 304 TARRLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGCILTTQEEAVIrqkwILPAHK 383
Cdd:COG4266   219 TRRRRD---------------PGNDWVIVRLAAPGVVERIEVDTAHFKGNAPDRASLQGADAPGGTDASL----ITQSMF 279
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2462575243 384 WKPLLPVTKLSPNQSHLFDslTLELQDVITHARLTIVPDGGVSRLRLRGFPSS 436
Cdd:COG4266   280 WFELLPRTKLQPDTRHRFR--ELAAAGPVTHVRLNIFPDGGVSRLRLFGRLTE 330
PRK13797 PRK13797
allantoicase;
50-435 9.68e-97

allantoicase;


Pssm-ID: 106738 [Multi-domain]  Cd Length: 516  Bit Score: 300.35  E-value: 9.68e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  50 MADAPkegrltrflDFTQLMDMASESVGGKILFATDDFFAPAENLIKSDSPCFKEHEYTEFGKWMDGWETRRKR-IPGHD 128
Cdd:PRK13797    1 MSDAP---------DLTNLVDLAAARFGGTVVAVNDEFFAFAERMLLAEPPVVRPGVFTERGQWTDGWETRRRRdLPGAD 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 129 WCVLRLGIQGVIRGFDVDVSYFTGDYAPRVSIQAAnleedklpeipergirtgAAATPEEFEAIAElKSDDWSYLVPMTE 208
Cdd:PRK13797   72 WAIVRLGAPGIAHAVTVDTTHFTGNAPEAVEIHGA------------------TLAGYPSAEDVAD-DSVHWVELVPRTP 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 209 LKPgnpaSGHNYFLVNSQQRW--THIRLNIFPDGGIARLRVFGTGQKDWTATDPKEpADLVAIAFGGVCVGFSNAKFGHP 286
Cdd:PRK13797  133 IAA----DAVNVLPVASSGRLriTHLRLTIHPDGGVARLRVHGTVVPDPRLLDRVT-SDLAAAYLGGVVVAASDMHYGDR 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 287 NNIIGVGGAKSMADGWETARRLDrppilendengillvPGCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGC--- 363
Cdd:PRK13797  208 HNLNASGDARAMGEGWETRRRRG---------------PGHDWAVVRLATQGTIVRAEVDTRHFRGNAPRAVALWAAdap 272
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462575243 364 -ILTTQEEAVIRQkwilpahkWKPLLPVTKLSPNQSHLFDsltLELQDVITHARLTIVPDGGVSRLRLRGFPS 435
Cdd:PRK13797  273 dLLDPDDLAAITE--------WRPLLPRTRVQPNTRHLFD---LEVPVQATHVRVDAIPDGGLARLRLTGAPT 334
Allantoicase pfam03561
Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of ...
77-252 2.06e-80

Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of the protein. These proteins allow the use of purines as secondary nitrogen sources in nitrogen-limiting conditions through the reaction: allantoate + H(2)0 = (-)-ureidoglycolate + urea.


Pssm-ID: 460972 [Multi-domain]  Cd Length: 150  Bit Score: 245.46  E-value: 2.06e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243  77 GGKILFATDDFFAPAENLIKSDsPCFKEheYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGFDVDVSYFTGDYAP 156
Cdd:pfam03561   1 GGKVLSASDEHFAPAENLLLPP-PVFPG--FTEFGGMGDGWETRRRRDPGHDWAIIRLGAPGVIRGIEVDTAHFKGNYPP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 157 RVSIQAANLEEDklpeipergirtgaaatpeefEAIAELKSDDWSYLVPMTELKPGNpasgHNYFLVNS--QQRWTHIRL 234
Cdd:pfam03561  78 SVSVEAAYLPGD---------------------EDEPELDDAGWTELLPRTKLGPDQ----RHFFEVDSltDKRYTHVRL 132
                         170
                  ....*....|....*...
gi 2462575243 235 NIFPDGGIARLRVFGTGQ 252
Cdd:pfam03561 133 NIYPDGGVARLRVYGRVV 150
Allantoicase pfam03561
Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of ...
272-435 1.61e-55

Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of the protein. These proteins allow the use of purines as secondary nitrogen sources in nitrogen-limiting conditions through the reaction: allantoate + H(2)0 = (-)-ureidoglycolate + urea.


Pssm-ID: 460972 [Multi-domain]  Cd Length: 150  Bit Score: 181.52  E-value: 1.61e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 272 GGVCVGFSNAKFGHPNNII-------GVGGAKSMADGWETARRLDrppilendengillvPGCEWAVFRLAHPGVITRIE 344
Cdd:pfam03561   1 GGKVLSASDEHFAPAENLLlpppvfpGFTEFGGMGDGWETRRRRD---------------PGHDWAIIRLGAPGVIRGIE 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462575243 345 IDTKYFEGNAPDSCKVDGCILTTQEEAvirqkWILPAHKWKPLLPVTKLSPNQSHLFDSLTLElQDVITHARLTIVPDGG 424
Cdd:pfam03561  66 VDTAHFKGNYPPSVSVEAAYLPGDEDE-----PELDDAGWTELLPRTKLGPDQRHFFEVDSLT-DKRYTHVRLNIYPDGG 139
                         170
                  ....*....|.
gi 2462575243 425 VSRLRLRGFPS 435
Cdd:pfam03561 140 VARLRVYGRVV 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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