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Conserved domains on  [gi|2462496485|ref|XP_054188874|]
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coiled-coil domain-containing protein 74B isoform X10 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CCDC74_C super family cl20803
Coiled coil protein 74, C terminal; This is a C-terminal conserved domain of coiled-coil ...
 176-291 1.35e-45

Coiled coil protein 74, C terminal; This is a C-terminal conserved domain of coiled-coil proteins from vertebrates. The function is not known. Expression levels in humans are elevated in breast cancer.


The actual alignment was detected with superfamily member pfam14917:

Pssm-ID: 464373  Cd Length: 123  Bit Score: 149.95  E-value: 1.35e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496485 176 LPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLLEGSQR-----PQAVPEEASFPRDQEATHFPKVSTKSLSKKC 250
Cdd:pfam14917   2 LPPHAPRPPTLQECEVIIRQLWNANSLQAQELQHLKSDLRESQNsskwtSDGYLLGKSYPKDQDAIQLPKVPLKGQSVKC 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2462496485 251 LLLSP-PVAERAILPALKQTPKNNFAERQKRLQAMQKRRLHR 291
Cdd:pfam14917  82 LALSPaPVAERVILPALKQTLNNNFAERRKRQQAVQRRRLHR 123
 
Name Accession Description Interval E-value
CCDC74_C pfam14917
Coiled coil protein 74, C terminal; This is a C-terminal conserved domain of coiled-coil ...
 176-291 1.35e-45

Coiled coil protein 74, C terminal; This is a C-terminal conserved domain of coiled-coil proteins from vertebrates. The function is not known. Expression levels in humans are elevated in breast cancer.


Pssm-ID: 464373  Cd Length: 123  Bit Score: 149.95  E-value: 1.35e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496485 176 LPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLLEGSQR-----PQAVPEEASFPRDQEATHFPKVSTKSLSKKC 250
Cdd:pfam14917   2 LPPHAPRPPTLQECEVIIRQLWNANSLQAQELQHLKSDLRESQNsskwtSDGYLLGKSYPKDQDAIQLPKVPLKGQSVKC 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2462496485 251 LLLSP-PVAERAILPALKQTPKNNFAERQKRLQAMQKRRLHR 291
Cdd:pfam14917  82 LALSPaPVAERVILPALKQTLNNNFAERRKRQQAVQRRRLHR 123
 
Name Accession Description Interval E-value
CCDC74_C pfam14917
Coiled coil protein 74, C terminal; This is a C-terminal conserved domain of coiled-coil ...
 176-291 1.35e-45

Coiled coil protein 74, C terminal; This is a C-terminal conserved domain of coiled-coil proteins from vertebrates. The function is not known. Expression levels in humans are elevated in breast cancer.


Pssm-ID: 464373  Cd Length: 123  Bit Score: 149.95  E-value: 1.35e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496485 176 LPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLLEGSQR-----PQAVPEEASFPRDQEATHFPKVSTKSLSKKC 250
Cdd:pfam14917   2 LPPHAPRPPTLQECEVIIRQLWNANSLQAQELQHLKSDLRESQNsskwtSDGYLLGKSYPKDQDAIQLPKVPLKGQSVKC 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2462496485 251 LLLSP-PVAERAILPALKQTPKNNFAERQKRLQAMQKRRLHR 291
Cdd:pfam14917  82 LALSPaPVAERVILPALKQTLNNNFAERRKRQQAVQRRRLHR 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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