|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
702-992 |
1.15e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 1.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 702 KETLRLRILSEDIERdmLCEDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNF 781
Cdd:TIGR02168 222 LRELELALLVLRLEE--LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 782 KMRQLEHVMDSAAEDPQSPKtpphfqtHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMEN 861
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLE-------ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 862 LRLESQQLIEKnwlLQGQLDDIKRQkENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEME 941
Cdd:TIGR02168 373 RLEELEEQLET---LRSKVAQLELQ-IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEE 448
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2462496768 942 CLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYEERERTSQEMEMLRKQVE 992
Cdd:TIGR02168 449 LEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQE 499
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
214-997 |
1.18e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 214 ANTEKLKAQLLQIQTELNNSKQEYEEFKELTRKRQLELESELQSLQKANLNLENL---LEATKACKRQEVSQLNKihaet 290
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisrLEQQKQILRERLANLER----- 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 291 lklknvmwiyndlfnlenagffpiqiittptkayqlhsrpvpklSPEMGSFGSLYTQNSSILDNDILNEpvppemneqaf 370
Cdd:TIGR02168 317 --------------------------------------------QLEELEAQLEELESKLDELAEELAE----------- 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 371 eaISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQmqelFSSERIDWTKQQEELLSQLNVLEKQLQETQTK 450
Cdd:TIGR02168 342 --LEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLET----LRSKVAQLELQIASLNNEIERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 451 NDFLKSEVHDLRVVLHSADKELSSVKLEYSsfktnqEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDSYDNLQ- 529
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAELEEL------EEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQa 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 530 -----EIMKFEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKEN----SSKEILKVLEAVRQEK 600
Cdd:TIGR02168 490 rldslERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAvvveNLNAAKKAIAFLKQNE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 601 QKETAKCEQQMAKVQKLEESLLATEK-------VISSLEKSRDSDKKVVADLMNQIQelrtsvceKTETIDTLKQELKDI 673
Cdd:TIGR02168 570 LGRVTFLPLDSIKGTEIQGNDREILKniegflgVAKDLVKFDPKLRKALSYLLGGVL--------VVDDLDNALELAKKL 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 674 NCKYNSALVDREesrvLIKKQEVdILDLKETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLLQSAQEELTK 753
Cdd:TIGR02168 642 RPGYRIVTLDGD----LVRPGGV-ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQ 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 754 KEALIQELQHKLNQKKEEVEQKKNEynfkMRQLEHVMDSAAEDpqspktpphfQTHLAKLLETQEQEIEDGRASKTSLEH 833
Cdd:TIGR02168 717 LRKELEELSRQISALRKDLARLEAE----VEQLEERIAQLSKE----------LTELEAEIEELEERLEEAEEELAEAEA 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 834 LVTKLNEDREVKNAEILRMKEQLREME----NLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQqlknEQEESIK 909
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRaeltLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS----EDIESLA 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 910 ERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLR--MTDEVERTQTLESKAfQEKEQLRSKLEEMYEERERTSQEMEML 987
Cdd:TIGR02168 859 AEIEELEELIEELESELEALLNERASLEEALALLRseLEELSEELRELESKR-SELRRELEELREKLAQLELRLEGLEVR 937
|
810
....*....|.
gi 2462496768 988 RKQV-ECLAEE 997
Cdd:TIGR02168 938 IDNLqERLSEE 948
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
431-987 |
2.32e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.49 E-value: 2.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 431 EELLSQLNVLEKQlQETQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKTNQ-EKEFNKLSERHMHVQLQLDNLRL 509
Cdd:COG1196 196 GELERQLEPLERQ-AEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEElEAELEELEAELAELEAELEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 510 ENEKL-LESKACLQDSYDNLQEIMKFE--IDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQfEEDKENSS 586
Cdd:COG1196 275 ELEELeLELEEAQAEEYELLAELARLEqdIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEE-LEEAEEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 587 KEILKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTL 666
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 667 KQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETLRLRILSEDIERdmlcEDLAHATEQLNMLTEASKKHSGLLQS 746
Cdd:COG1196 434 EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL----EELAEAAARLLLLLEAEADYEGFLEG 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 747 AQEELTKK-----------------------EALIQELQHKLNQKKEEVEQKKNEY---NFKMRQLEHVMDSAAEDPQSP 800
Cdd:COG1196 510 VKAALLLAglrglagavavligveaayeaalEAALAAALQNIVVEDDEVAAAAIEYlkaAKAGRATFLPLDKIRARAALA 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 801 KTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDRE-------VKNAEILRMKEQLREMENLRLESQQLIEKN 873
Cdd:COG1196 590 AALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLeaalrraVTLAGRLREVTLEGEGGSAGGSLTGGSRRE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 874 wLLQGQLDDIKRQKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQ 953
Cdd:COG1196 670 -LLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580 590
....*....|....*....|....*....|....
gi 2462496768 954 TLESKAFQEKEQLRSKLEemyEERERTSQEMEML 987
Cdd:COG1196 749 EEEALEELPEPPDLEELE---RELERLEREIEAL 779
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
380-978 |
1.05e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 59.36 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 380 VQEQMSALQAklDEEEHKNLKLQQHVDKLEhhstQMQELFSSERIDWTKQQEELLSQLNVLEKQLQ----ETQTKNDFLK 455
Cdd:pfam15921 243 VEDQLEALKS--ESQNKIELLLQQHQDRIE----QLISEHEVEITGLTEKASSARSQANSIQSQLEiiqeQARNQNSMYM 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 456 SEVHDLRVVLHSADKELSSVKLEYSSFKTNQEKEfnklserhmhvqlqldnLRLENEKLLESKAclqdsydnlqeimkfE 535
Cdd:pfam15921 317 RQLSDLESTVSQLRSELREAKRMYEDKIEELEKQ-----------------LVLANSELTEART---------------E 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 536 IDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKL------------SLQFEEDKENSSKEILK-VLEAVRQEKQk 602
Cdd:pfam15921 365 RDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLwdrdtgnsitidHLRRELDDRNMEVQRLEaLLKAMKSECQ- 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 603 etAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSvcEKTETIDTLKQELKDINCKYNSALV 682
Cdd:pfam15921 444 --GQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESS--ERTVSDLTASLQEKERAIEATNAEI 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 683 DREESRVLIKKQEVDILDLK-----------ETLRLRIlsedIERDMLCEDLAHATEQLNMLTEASKKHSGLLQSAQEEL 751
Cdd:pfam15921 520 TKLRSRVDLKLQELQHLKNEgdhlrnvqtecEALKLQM----AEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQL 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 752 T------------------KKEALIQELQHKLNQKKEEveqKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKL 813
Cdd:pfam15921 596 EkeindrrlelqefkilkdKKDAKIRELEARVSDLELE---KVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSL 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 814 LETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREME-------NLRLESQQLIEKNwllQGQLDDIKRQ 886
Cdd:pfam15921 673 SEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEgsdghamKVAMGMQKQITAK---RGQIDALQSK 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 887 ---KENSDQNHPDNQQLKNEQEESIKERLA-----KSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQTLESK 958
Cdd:pfam15921 750 iqfLEEAMTNANKEKHFLKEEKNKLSQELStvateKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR 829
|
650 660
....*....|....*....|
gi 2462496768 959 afQEKEQLRSKLEEMYEERE 978
Cdd:pfam15921 830 --QEQESVRLKLQHTLDVKE 847
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
431-762 |
3.20e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.68 E-value: 3.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 431 EELLSQLNVLEKQLQETQtKNDFLKSEVHDLRV-----VLHSADKELSSVKLEYSSfktnQEKEFNKLSERHMHVQLQLD 505
Cdd:TIGR02168 196 NELERQLKSLERQAEKAE-RYKELKAELRELELallvlRLEELREELEELQEELKE----AEEELEELTAELQELEEKLE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 506 NLRLENEKLLESKACLQDSYDNLQEimkfEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLslqfeEDKENS 585
Cdd:TIGR02168 271 ELRLEVSELEEEIEELQKELYALAN----EISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL-----AEELAE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 586 SKEILKVLEAVRQEKQKETAKCEqqmAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDT 665
Cdd:TIGR02168 342 LEEKLEELKEELESLEAELEELE---AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 666 LKQELKDINCKYNSALVDREESRVLIKKQEvdILDLKETLRLRIlsedierdmlcEDLAHATEQLNMLTEASKKHSGLLQ 745
Cdd:TIGR02168 419 LQQEIEELLKKLEEAELKELQAELEELEEE--LEELQEELERLE-----------EALEELREELEEAEQALDAAERELA 485
|
330
....*....|....*..
gi 2462496768 746 SAQEELTKKEALIQELQ 762
Cdd:TIGR02168 486 QLQARLDSLERLQENLE 502
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
721-992 |
5.76e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 53.59 E-value: 5.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 721 EDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEynfKMRQLEHVMDSAAEDP--- 797
Cdd:pfam17380 306 EEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELE---RIRQEEIAMEISRMREler 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 798 ---QSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQ-LREMENLRLESQQLIEKN 873
Cdd:pfam17380 383 lqmERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEErAREMERVRLEEQERQQQV 462
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 874 WLLQGQLDDIKRQKENSDQNHPDNQQLKNEQEESIKERLA--KSKIVEEMLKMK---ADLEEVQSALYNKEMEclRMTDE 948
Cdd:pfam17380 463 ERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEerKQAMIEEERKRKlleKEMEERQKAIYEEERR--REAEE 540
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2462496768 949 VERTQTLESKAFQEKEQL------RSKLEEMYEERERTSQEMEMLRKQVE 992
Cdd:pfam17380 541 ERRKQQEMEERRRIQEQMrkateeRSRLEAMEREREMMRQIVESEKARAE 590
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
367-653 |
1.38e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 367 EQAFEAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELFSSEridwTKQQEELLSQLNVLEKQLQE 446
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL----LAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 447 TQTKNDFLKSEVHDLRVVLHSADKELSSVKLEyssFKTNQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDSYD 526
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEE---LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLE 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 527 NLQEIMKFE--IDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKV--LEAVRQEKQK 602
Cdd:COG1196 391 ALRAAAELAaqLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEeaLLELLAELLE 470
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2462496768 603 ETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELR 653
Cdd:COG1196 471 EAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRG 521
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
394-1034 |
2.82e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 2.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 394 EEHKNLKLQQHVDKLEHHSTQMQELFSseridwtkQQEELLSQLNVLEKQLQETQTKNDFLKSEVHDLRVVLHSADKELS 473
Cdd:TIGR02168 220 AELRELELALLVLRLEELREELEELQE--------ELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 474 SVKLEYSSFKTN---QEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDSYDNLQEIMKF---------------- 534
Cdd:TIGR02168 292 ALANEISRLEQQkqiLRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESleaeleeleaeleele 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 535 --------EIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAK 606
Cdd:TIGR02168 372 srleeleeQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 607 CEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLKQELKDINC----------- 675
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGilgvlselisv 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 676 --KYNSAL------------VDREESrvliKKQEVDILDLKETLRLRILSEDIERD------------------------ 717
Cdd:TIGR02168 532 deGYEAAIeaalggrlqavvVENLNA----AKKAIAFLKQNELGRVTFLPLDSIKGteiqgndreilkniegflgvakdl 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 718 ------------------MLCEDLAHATEQLNMLTE---------------------ASKKHSGLLQSAQE--ELTKKEA 756
Cdd:TIGR02168 608 vkfdpklrkalsyllggvLVVDDLDNALELAKKLRPgyrivtldgdlvrpggvitggSAKTNSSILERRREieELEEKIE 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 757 LIQELQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDpqspktpphfQTHLAKLLETQEQEIEDGRASKTSLEHLVT 836
Cdd:TIGR02168 688 ELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQ----------ISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 837 KLNEDREVKNAEILRMKEQLREMENLRLESQQLIEKnwlLQGQLDDIKRQKENSdqnhpdNQQLKNEQEESIKERLAKSK 916
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ---LKEELKALREALDEL------RAELTLLNEEAANLRERLES 828
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 917 IVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYEERERTSQEMEMLRKQVECLAE 996
Cdd:TIGR02168 829 LERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 2462496768 997 ENGKLV-GHQNLHQKI-QYVVRLKKENVRLAEETEKLRAE 1034
Cdd:TIGR02168 909 KRSELRrELEELREKLaQLELRLEGLEVRIDNLQERLSEE 948
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
577-910 |
3.22e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.61 E-value: 3.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 577 QFEEDKENSSKEilkvLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVA----DLMNQIQEL 652
Cdd:TIGR02169 167 EFDRKKEKALEE----LEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLkekeALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 653 RTSVCEKTETIDTLKQELKDINCKYNSALVDREE-SRVLIKKQEVDILDLKEtlrlRILSEDIERDMLCEDLAHATEQLN 731
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEElNKKIKDLGEEEQLRVKE----KIGELEAEIASLERSIAEKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 732 MLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDPQSPKTpphfqthLA 811
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD-------YR 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 812 KLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMENLRLESQQLIEKnwlLQGQLDDIKRQKENSD 891
Cdd:TIGR02169 392 EKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKK---QEWKLEQLAADLSKYE 468
|
330
....*....|....*....
gi 2462496768 892 QNHPDNQQLKNEQEESIKE 910
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSK 487
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
610-843 |
3.55e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 3.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 610 QMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRV 689
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 690 LIKKQEvdiLDLKETLRLRILSEDIERDML------CEDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQH 763
Cdd:COG4942 98 ELEAQK---EELAELLRALYRLGRQPPLALllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 764 KLNQKKEEVEQKKNEYNFKMRQLEHVMDSaaedpqspktpphfqthLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDRE 843
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLAR-----------------LEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
540-1045 |
3.60e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.30 E-value: 3.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 540 SRNLQNFKKENETLKSD-LNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAKCEQQMAKVQKLE 618
Cdd:PTZ00121 1277 ARKADELKKAEEKKKADeAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 619 ESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRtsvceKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEvdi 698
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK-----KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAE--- 1428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 699 ldlkETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKhsgllqsaQEELTKKEALIQELQHKlnQKKEEVEQKKNE 778
Cdd:PTZ00121 1429 ----EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKK--------AEEAKKADEAKKKAEEA--KKADEAKKKAEE 1494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 779 YNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDR---EVKNAEILRMKEQ 855
Cdd:PTZ00121 1495 AKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKkaeEKKKAEEAKKAEE 1574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 856 LREMENLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQ------QLKNEQEESIKERLAKSKIVEEMLKMKADLE 929
Cdd:PTZ00121 1575 DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEakikaeELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 930 EVQSALYNKEMECLRMTDEVERTQTLESKAFQEK---EQLRSKLEEMYEERERTSQEMEMLRKQVECLAEENGKLVGHQN 1006
Cdd:PTZ00121 1655 AEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKkaaEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEE 1734
|
490 500 510
....*....|....*....|....*....|....*....
gi 2462496768 1007 LHQKIQYVVRlKKENVRLAEETEKLRAENVFLKEKKRSE 1045
Cdd:PTZ00121 1735 AKKEAEEDKK-KAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
702-916 |
4.02e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 702 KETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNF 781
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 782 KMRQLEHVMDSAAED----PQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLR 857
Cdd:COG4942 109 LLRALYRLGRQPPLAlllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERA 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462496768 858 EMENLRLESQQLIEKnwlLQGQLDDIKRQKENSDQNHPDNQQLKNEQEESIKERLAKSK 916
Cdd:COG4942 189 ALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
454-772 |
5.05e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 5.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 454 LKSEVHDLRVVLHSADKELSSVKLEyssfKTNQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDSYDNLQEimk 533
Cdd:TIGR02169 672 EPAELQRLRERLEGLKRELSSLQSE----LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEE--- 744
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 534 fEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKL----SLQFEEDKENSS-------KEILKVLEAVRQEKQK 602
Cdd:TIGR02169 745 -DLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLearlSHSRIPEIQAELskleeevSRIEARLREIEQKLNR 823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 603 ETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTET-------IDTLKQELKDINC 675
Cdd:TIGR02169 824 LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRlgdlkkeRDELEAQLRELER 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 676 KYNSALVDREESRVLIKKQEVDILDLKETLR-----LRILSEDIERDMLCEDLA----------HATEQLNMLT----EA 736
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSeiedpKGEDEEIPEEELSLEDVQaelqrveeeiRALEPVNMLAiqeyEE 983
|
330 340 350
....*....|....*....|....*....|....*.
gi 2462496768 737 SKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEV 772
Cdd:TIGR02169 984 VLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
371-706 |
7.78e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 7.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 371 EAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELFSSERIDWTKQQEELLSQLNVLEKQLQETQTK 450
Cdd:TIGR02169 173 EKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 451 NDFLKSEVHDLRVVLHSADKELSSVkleyssfktnqEKEFNKL-SERHMHVQLQLDNLRLENEKLLESKACLQDsydnlq 529
Cdd:TIGR02169 253 LEKLTEEISELEKRLEEIEQLLEEL-----------NKKIKDLgEEEQLRVKEKIGELEAEIASLERSIAEKER------ 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 530 eimkfEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKEnsskeilkVLEAVRQEKQKETAKCEQ 609
Cdd:TIGR02169 316 -----ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE--------ELEDLRAELEEVDKEFAE 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 610 QMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRV 689
Cdd:TIGR02169 383 TRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAA 462
|
330
....*....|....*..
gi 2462496768 690 LIKKQEVDILDLKETLR 706
Cdd:TIGR02169 463 DLSKYEQELYDLKEEYD 479
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
744-1045 |
1.09e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 744 LQSAQEELTKKEALIQELQHKLNQKKEEVEQ--KKNEYNFKMRQLEHVMDSAAEDpqspktpphfqtHLAKLLETQEQEI 821
Cdd:COG1196 181 LEATEENLERLEDILGELERQLEPLERQAEKaeRYRELKEELKELEAELLLLKLR------------ELEAELEELEAEL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 822 EDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREM-ENLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQL 900
Cdd:COG1196 249 EELEAELEELEAELAELEAELEELRLELEELELELEEAqAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 901 KNE----QEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYEE 976
Cdd:COG1196 329 EEEleelEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA 408
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462496768 977 RERTSQEMEMLRKQVECLAEENGKLVghQNLHQKIQYVVRLKKENVRLAEETEKLRAENVFLKEKKRSE 1045
Cdd:COG1196 409 EEALLERLERLEEELEELEEALAELE--EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
364-1046 |
1.69e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.20 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 364 EMNEQAFEAISEELRTVQEQMSALQAKLDEEEHKNLKLQQhvdKLEHHSTQMQELFSSERIDWTKQQEELLSQLNVLEKQ 443
Cdd:pfam02463 246 LRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQE---EELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 444 LQETQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKTNQEKEFNKLSErhmhvqlQLDNLRLENEKLLESKACLQd 523
Cdd:pfam02463 323 KKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEE-------LLAKKKLESERLSSAAKLKE- 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 524 sydNLQEIMKFEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKE 603
Cdd:pfam02463 395 ---EELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 604 TAKCEQQMAKVQ----------KLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLK------ 667
Cdd:pfam02463 472 DLLKETQLVKLQeqlelllsrqKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAIstaviv 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 668 ---QELKDINCKYNSALVDREESRVLIKKQEVDILDLKETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLL 744
Cdd:pfam02463 552 evsATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKD 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 745 QSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNF-KMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIED 823
Cdd:pfam02463 632 TELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLsELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEE 711
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 824 GRASKTSLEHL---VTKLNEDREVKNAEILRMKEQLREMENLRLESQQLIEKNWLLQGQLDDIK---------------- 884
Cdd:pfam02463 712 LKKLKLEAEELladRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKElaeerekteklkveee 791
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 885 -----------RQKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQ 953
Cdd:pfam02463 792 keeklkaqeeeLRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQE 871
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 954 TLESKAFQEKEQLRSKLEEMYEERERTSQEMEMLRKQVECLAEENGKLVGHQNLHQKIQYVVRLKKENVRLAEETEKLRA 1033
Cdd:pfam02463 872 LLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKE 951
|
730
....*....|...
gi 2462496768 1034 ENVFLKEKKRSES 1046
Cdd:pfam02463 952 ENNKEEEEERNKR 964
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
367-621 |
8.65e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 367 EQAFEAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEhhstqmqelfsseridwtKQQEELLSQLNVLEKQLQE 446
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE------------------AQIEQLKEELKALREALDE 807
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 447 TQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYssfkTNQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDSYD 526
Cdd:TIGR02168 808 LRAELTLLNEEAANLRERLESLERRIAATERRL----EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERA 883
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 527 NLQEIM---KFEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKE 603
Cdd:TIGR02168 884 SLEEALallRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKI 963
|
250
....*....|....*...
gi 2462496768 604 TAKCEQQMAKVQKLEESL 621
Cdd:TIGR02168 964 EDDEEEARRRLKRLENKI 981
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
366-930 |
2.16e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 366 NEQAFEAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELfsseridwTKQQEELLSQLNVLEKQLQ 445
Cdd:PRK03918 198 KEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESL--------EGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 446 ETQTKNDFLKSEVHDLRVVLHSADK--ELSSVKLEYSSFKTNQEKEFNKLSERHMHVQLQLDNLrleneklleskaclqd 523
Cdd:PRK03918 270 ELKKEIEELEEKVKELKELKEKAEEyiKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEL---------------- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 524 sydnlqEIMKFEIDQLSRNLQNFKKENETLKSDLnnlmELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKE 603
Cdd:PRK03918 334 ------EEKEERLEELKKKLKELEKRLEELEERH----ELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEI 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 604 TAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQiqelrtsvcEKTETIDTLKQELKDINCKYNSALVD 683
Cdd:PRK03918 404 EEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEE---------HRKELLEEYTAELKRIEKELKEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 684 REESRVLIKKQEVDILDLKETLRLRILSEDIE------RDMLCEDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEAL 757
Cdd:PRK03918 475 ERKLRKELRELEKVLKKESELIKLKELAEQLKeleeklKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 758 IQELQhKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKlleTQEQEIEDGRASKTSLEHLVTK 837
Cdd:PRK03918 555 KKKLA-ELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELK---DAEKELEREEKELKKLEEELDK 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 838 LNEDREVKNAEILRMKEQLREM------ENLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQLKNEQEesikER 911
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELekkyseEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELE----ER 706
|
570
....*....|....*....
gi 2462496768 912 LAKSKIVEEMLKMKADLEE 930
Cdd:PRK03918 707 EKAKKELEKLEKALERVEE 725
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
393-1036 |
2.60e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 393 EEEHKNLKLQQHVDKLEHHSTQMQELFSSERIDWTKQQEELLSQLNVLEKQLQETQTKNDFLKSEVHDLRVVLHSADKEL 472
Cdd:TIGR00618 225 EKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQ 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 473 SSVKLEySSFKTNQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDS----YDNLQEIMKFEIDQLSRNLQNFKK 548
Cdd:TIGR00618 305 IEQQAQ-RIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIhirdAHEVATSIREISCQQHTLTQHIHT 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 549 ENETLKSDLNNLMELL-EAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKV 627
Cdd:TIGR00618 384 LQQQKTTLTQKLQSLCkELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 628 ISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEvDILDLKETLRL 707
Cdd:TIGR00618 464 SAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQ-RGEQTYAQLET 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 708 RILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMRQLE 787
Cdd:TIGR00618 543 SEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 788 HVMDS---AAEDPQSPKTPPHFQTHLAKLLET---QEQEIEDGRASKTSLEHLVTKLNEDREVKN--AEILRMKEQLREM 859
Cdd:TIGR00618 623 PEQDLqdvRLHLQQCSQELALKLTALHALQLTltqERVREHALSIRVLPKELLASRQLALQKMQSekEQLTYWKEMLAQC 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 860 ENLRLESQQLIEKNWLLQGQLDDIKR-QKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNK 938
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSsLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSH 782
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 939 EMECLRMTDEVERTQTLESKafQEKEQLRSKLEEMYEERERTSQEMEMLRKQVECLAEENGKLVgHQNLHQKIQYVVRLK 1018
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLK--TLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATL-GEITHQLLKYEECSK 859
|
650 660
....*....|....*....|....
gi 2462496768 1019 ------KENVRLAEETEKLRAENV 1036
Cdd:TIGR00618 860 qlaqltQEQAKIIQLSDKLNGINQ 883
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
374-1045 |
3.19e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.96 E-value: 3.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 374 SEELRTVQEQMSALQAKLDEEEHKNLKLQ-QHVDKLEHHSTQMQELFSSERIDWTKQQEELLSQLNVLEKQLQETQTKND 452
Cdd:pfam02463 175 LKKLIEETENLAELIIDLEELKLQELKLKeQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 453 FLKSE----------VHDLRVVLHSADKELSSVKLEYSSFKTNQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQ 522
Cdd:pfam02463 255 SSKQEiekeeeklaqVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEK 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 523 DSYDNLQEIMKFEIDQLSRNL---QNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQE 599
Cdd:pfam02463 335 EEIEELEKELKELEIKREAEEeeeEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELA 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 600 KQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLKQELKDINC---K 676
Cdd:pfam02463 415 RQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLsrqK 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 677 YNSALVDREESRVLIKKQEVDILDLKETL---------RLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLLQSA 747
Cdd:pfam02463 495 LEERSQKESKARSGLKVLLALIKDGVGGRiisahgrlgDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELP 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 748 QEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHL---AKLLETQEQEIEDG 824
Cdd:pfam02463 575 LGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLkesAKAKESGLRKGVSL 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 825 RASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMENLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQLKNEQ 904
Cdd:pfam02463 655 EEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKI 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 905 EESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYE-ERERTSQE 983
Cdd:pfam02463 735 NEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRAlEEELKEEA 814
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462496768 984 MEMLRKQVECLAEENGKLVGHQNLHQKIQYVVRLKKENVRLAEETEKLRAENVFLKEKKRSE 1045
Cdd:pfam02463 815 ELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKE 876
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
530-997 |
3.71e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 530 EIMKFEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAKCEQ 609
Cdd:PTZ00121 1325 EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK 1404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 610 QMA-KVQKLEESLLATEKVISSLEKSRDSDK-KVVADLMNQIQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREES 687
Cdd:PTZ00121 1405 KKAdELKKAAAAKKKADEAKKKAEEKKKADEaKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKK 1484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 688 RVLIKKQEVDILDLKETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGllqSAQEELTKKEALIQELQHKLNQ 767
Cdd:PTZ00121 1485 ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA---KKAEEKKKADELKKAEELKKAE 1561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 768 KKEEVEQKKNE---YNFKMRQLEhVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREV 844
Cdd:PTZ00121 1562 EKKKAEEAKKAeedKNMALRKAE-EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKK 1640
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 845 KNAEILRMKEQLR-EMENLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHpdnQQLKNEQEESIKERLAKSKIVEEmlK 923
Cdd:PTZ00121 1641 KEAEEKKKAEELKkAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA---EALKKEAEEAKKAEELKKKEAEE--K 1715
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462496768 924 MKADLEEVQSALYNKEMECLRMTDEVERTQTLESKafqEKEQLRSKLEEMYEERERTSQEmemLRKQVECLAEE 997
Cdd:PTZ00121 1716 KKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAK---KDEEEKKKIAHLKKEEEKKAEE---IRKEKEAVIEE 1783
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
428-653 |
4.31e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 4.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 428 KQQEELLSQLNVLEKQLQETQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSsfktNQEKEFNKLSERHMHVQLQLDNL 507
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA----ALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 508 RLENEKLLeSKACLQDSYDNLQEIMKFE-IDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEdkenss 586
Cdd:COG4942 103 KEELAELL-RALYRLGRQPPLALLLSPEdFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE------ 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462496768 587 keilkvLEAVRQEKQKETAKCEQQMAKVQKLeesllatekvISSLEKSRDSDKKVVADLMNQIQELR 653
Cdd:COG4942 176 ------LEALLAELEEERAALEALKAERQKL----------LARLEKELAELAAELAELQQEAEELE 226
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
535-860 |
4.46e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 535 EIDQLSRNLQNFKKENETLKSDLNnlmellEAEKERNNKLSLQfeEDKENSSKEILKVLEAVRQEKQKETAKCEQQMAKV 614
Cdd:TIGR02169 675 ELQRLRERLEGLKRELSSLQSELR------RIENRLDELSQEL--SDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDL 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 615 QKLEESLLATEKvissleksrdsdkkvvadlmnQIQELRTSVCEKTETIDTLKQELKDINCKYNsalvdreESRVLIKKQ 694
Cdd:TIGR02169 747 SSLEQEIENVKS---------------------ELKELEARIEELEEDLHKLEEALNDLEARLS-------HSRIPEIQA 798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 695 EVDILDlKETLRLRILSEDIERDmlcedlahaTEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQ 774
Cdd:TIGR02169 799 ELSKLE-EEVSRIEARLREIEQK---------LNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEE 868
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 775 KKNEYNFKMRQLEHVMDSAAEDpqspktpphfQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKE 854
Cdd:TIGR02169 869 ELEELEAALRDLESRLGDLKKE----------RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIED 938
|
....*.
gi 2462496768 855 QLREME 860
Cdd:TIGR02169 939 PKGEDE 944
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
371-935 |
5.52e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.12 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 371 EAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELFSSERIdwtkqqeeLLSQLNVLEKQLQETQTK 450
Cdd:PRK01156 162 NSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSI--------TLKEIERLSIEYNNAMDD 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 451 NDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKTNQEK--EFNKLSERHMhvqlqldnlRLENEKLLESKACLQDSYD-- 526
Cdd:PRK01156 234 YNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKnnYYKELEERHM---------KIINDPVYKNRNYINDYFKyk 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 527 ----NLQEIMKFEIDQLSRNLQNFKK------------ENETLKSDLNNLMELLEAEKERNNKLSLQFEEDK---ENSSK 587
Cdd:PRK01156 305 ndieNKKQILSNIDAEINKYHAIIKKlsvlqkdyndyiKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKkkiEEYSK 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 588 EILKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQEL----RTSVCEKTETI 663
Cdd:PRK01156 385 NIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLngqsVCPVCGTTLGE 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 664 DTLKQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETLRlRILSEDIER----DMLCEDLAHATE----QLNMLTE 735
Cdd:PRK01156 465 EKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKE-YLESEEINKsineYNKIESARADLEdikiKINELKD 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 736 ASKK-----------HSGLLQSAQEELTKKEALIQELQHKLNQK-KEEVEQKKNEYNFKMRQLEhvmdSAAEDPQS--PK 801
Cdd:PRK01156 544 KHDKyeeiknrykslKLEDLDSKRTSWLNALAVISLIDIETNRSrSNEIKKQLNDLESRLQEIE----IGFPDDKSyiDK 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 802 TPPHFQTHlAKLLETQEQEIEDGRASKTSLEHLVTKLNEdrevknaEILRMKEQLREMENLRLESQQLIEKNWLLQGQLD 881
Cdd:PRK01156 620 SIREIENE-ANNLNNKYNEIQENKILIEKLRGKIDNYKK-------QIAEIDSIIPDLKEITSRINDIEDNLKKSRKALD 691
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 2462496768 882 DIKRQKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSAL 935
Cdd:PRK01156 692 DAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
643-796 |
6.45e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 6.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 643 ADLMNQIQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETLRLR--ILSEDIER---- 716
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERreELGERARAlyrs 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 717 -------DMLCE-----DLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMR 784
Cdd:COG3883 99 ggsvsylDVLLGsesfsDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQA 178
|
170
....*....|..
gi 2462496768 785 QLEHVMDSAAED 796
Cdd:COG3883 179 EQEALLAQLSAE 190
|
|
| HMMR_C |
pfam15908 |
Hyaluronan mediated motility receptor C-terminal; HMMR_C is the C-terminal region of ... |
928-1034 |
7.12e-04 |
|
Hyaluronan mediated motility receptor C-terminal; HMMR_C is the C-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464934 [Multi-domain] Cd Length: 157 Bit Score: 41.44 E-value: 7.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 928 LEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYEERERTSQEMEMLRKQVECLAEENGKLVGHQNL 1007
Cdd:pfam15908 4 LEMEEQRKARLENTVDELTEEIKKWRNLYEELYNKTKPFQEQLDAFEAEKNALLNENGAAQEELNKLSDAYAKLLGHQNQ 83
|
90 100
....*....|....*....|....*..
gi 2462496768 1008 HQKIQYVVRLKKENVRLAEETEKLRAE 1034
Cdd:pfam15908 84 KQKIKHVVKLKEENTQLKQEVSKLRSQ 110
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
590-1027 |
8.15e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 8.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 590 LKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVA--DLMNQIQELRTSVCEKTETIDTLK 667
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 668 QELKDinckYNSALVDREESRVLIKKQEVDILDLKETLRLRILsedierdmlcEDLAHATEQLNMLTEASKKHSGLLQSA 747
Cdd:COG4717 153 ERLEE----LRELEEELEELEAELAELQEELEELLEQLSLATE----------EELQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 748 QEELTKKEALIQELQHKLNQKKEEveQKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRAS 827
Cdd:COG4717 219 QEELEELEEELEQLENELEAAALE--ERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLARE 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 828 KTSLEHLVTKLNEDREVKNAEILRMKEQLREMENLRLESQQLIEKNWL-------LQGQLDDIKRQKENSDQNHPDNQQL 900
Cdd:COG4717 297 KASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDrieelqeLLREAEELEEELQLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 901 KNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMEclrmtdevertqTLESKAFQEKEQLRSKLEEMYEERERT 980
Cdd:COG4717 377 AEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGE------------LEELLEALDEEELEEELEELEEELEEL 444
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2462496768 981 SQEMEMLRKQVECLAEENGKLVGHQNLHQKIQYVVRLKKENVRLAEE 1027
Cdd:COG4717 445 EEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEE 491
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
371-778 |
1.30e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.89 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 371 EAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHST---QMQELFSSERIDWTKQQEELLSQLNVLEKQLQET 447
Cdd:pfam10174 292 DQLKQELSKKESELLALQTKLETLTNQNSDCKQHIEVLKESLTakeQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDL 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 448 QTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKT---NQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDS 524
Cdd:pfam10174 372 TEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEqlrDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKERI 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 525 YDNLQEIMKFEIDQLSRNLQNFKKENETLKSDLNNLM-ELLEAEkerNNKLSLQFEEDKENSS----KEILKVLEAVRQE 599
Cdd:pfam10174 452 IERLKEQREREDRERLEELESLKKENKDLKEKVSALQpELTEKE---SSLIDLKEHASSLASSglkkDSKLKSLEIAVEQ 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 600 KQKETAKCEQQMAKVQKLEESLLATEKV---ISSLEKS----RDSDKKVVAD---LMNQIQELRTSVCEKTETIDTLKQE 669
Cdd:pfam10174 529 KKEECSKLENQLKKAHNAEEAVRTNPEIndrIRLLEQEvaryKEESGKAQAEverLLGILREVENEKNDKDKKIAELESL 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 670 LKDINCKYNSALVDREESRVLIKKQEVDILDlkETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHsglLQSAQE 749
Cdd:pfam10174 609 TLRQMKEQNKKVANIKHGQQEMKKKGAQLLE--EARRREDNLADNSQQLQLEELMGALEKTRQELDATKAR---LSSTQQ 683
|
410 420
....*....|....*....|....*....
gi 2462496768 750 ELTKKEALIQELQHKLNQKKEEVEQKKNE 778
Cdd:pfam10174 684 SLAEKDGHLTNLRAERRKQLEEILEMKQE 712
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
486-985 |
1.61e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 486 QEKEFNKLSERHMHVQLQLDNLRLENEKLLESKACLQDSYDNLQEIMKfEIDQLSRNLQNFKKENETLksdLNNLMELLE 565
Cdd:pfam01576 10 KEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCA-EAEEMRARLAARKQELEEI---LHELESRLE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 566 AEKERNNKLSLQFEEDKENSS--KEILKVLEAVRQEKQKETAKCEqqmAKVQKLEESLLATEKVISSLEKSRDSDKKVVA 643
Cdd:pfam01576 86 EEEERSQQLQNEKKKMQQHIQdlEEQLDEEEAARQKLQLEKVTTE---AKIKKLEEDILLLEDQNSKLSKERKLLEERIS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 644 DLMNQIQELRtsvcEKTETIDTLKQelkdincKYNSALVDREESRvliKKQEVDILDLKETLRLRILSEDIERDMLCEDL 723
Cdd:pfam01576 163 EFTSNLAEEE----EKAKSLSKLKN-------KHEAMISDLEERL---KKEEKGRQELEKAKRKLEGESTDLQEQIAELQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 724 AHATEQLNMLTEASKKHSGLLQSAQEELTKKEAL---IQELQHKLNQKKEEVEQKKNEYNFKMRQ--------------L 786
Cdd:pfam01576 229 AQIAELRAQLAKKEEELQAALARLEEETAQKNNAlkkIRELEAQISELQEDLESERAARNKAEKQrrdlgeelealkteL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 787 EHVMDSAAEDPQSPKTPPHFQTHLAKLLEtqeqeiEDGRASKTSLEHLVTKLNEDREVKNAEILRMKeqlREMENLRLES 866
Cdd:pfam01576 309 EDTLDTTAAQQELRSKREQEVTELKKALE------EETRSHEAQLQEMRQKHTQALEELTEQLEQAK---RNKANLEKAK 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 867 QQLIEKNWLLQGQLDDIKRQKENSDQNHPD-NQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRM 945
Cdd:pfam01576 380 QALESENAELQAELRTLQQAKQDSEHKRKKlEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKL 459
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 2462496768 946 TDEV-------ERTQTLESKAFQEKEQLRSKLEEMYEERERTSQEME 985
Cdd:pfam01576 460 SKDVsslesqlQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLE 506
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
440-655 |
1.63e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 440 LEKQLQETQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKTNQEKEFnklserhmhVQLQLDNLRLENEKLLESKA 519
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKL---------LLQQLSELESQLAEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 520 CLQDSYDNLQEIMKFEIDQLSRNLQNfkKENETLKSDLNNLMELLEAEKERNN-------KLSLQFEEDKENSSKEILKV 592
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQS--PVIQQLRAQLAELEAELAELSARYTpnhpdviALRAQIAALRAQLQQEAQRI 314
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462496768 593 LEAVRQEKQKETAKCEQQMAKVQKLEE---SLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTS 655
Cdd:COG3206 315 LASLEAELEALQAREASLQAQLAQLEArlaELPELEAELRRLEREVEVARELYESLLQRLEEARLA 380
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-1043 |
1.94e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 537 DQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAvrQEKQKETAKCEQQMAKVQK 616
Cdd:PTZ00121 1318 DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA--KKKADAAKKKAEEKKKADE 1395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 617 LEESLLATEKVISSLEKSRDSDKKVvadlmnqiQELRTSVCEKTETiDTLKQELKDINcKYNSALVDREESRvlikKQEV 696
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKKKA--------DEAKKKAEEKKKA-DEAKKKAEEAK-KADEAKKKAEEAK----KAEE 1461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 697 DILDLKETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKK 776
Cdd:PTZ00121 1462 AKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK 1541
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 777 NEYNFK---MRQLEHVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMK 853
Cdd:PTZ00121 1542 AEEKKKadeLKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIK 1621
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 854 -EQLREMENLRLESQQLIEKNWLLQGQLDDIKRQKEnsdQNHPDNQQLKNEQEESIKErlakskiVEEMLKMKADLEEVQ 932
Cdd:PTZ00121 1622 aEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEE---ENKIKAAEEAKKAEEDKKK-------AEEAKKAEEDEKKAA 1691
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 933 SALYNKEMEclrmTDEVERTQTLESKAFQEKEQLRSKleemYEERERTSQEMEMLRKQVECLAEENGKLVGHQNLHQKIQ 1012
Cdd:PTZ00121 1692 EALKKEAEE----AKKAEELKKKEAEEKKKAEELKKA----EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLK 1763
|
490 500 510
....*....|....*....|....*....|.
gi 2462496768 1013 YVVRLKKENVRlaEETEKLRAENVFLKEKKR 1043
Cdd:PTZ00121 1764 KEEEKKAEEIR--KEKEAVIEEELDEEDEKR 1792
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
374-1036 |
2.04e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 374 SEELRTVQEQMSALQAKLDEEehknlklqqhVDKLEHHSTQMQELFSSERIdwTKQQEELLSQLNVLEKQLQETQTKNDF 453
Cdd:PTZ00121 1280 ADELKKAEEKKKADEAKKAEE----------KKKADEAKKKAEEAKKADEA--KKKAEEAKKKADAAKKKAEEAKKAAEA 1347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 454 LKSEVHDLRVVLHSADKELSSVKLEYSSFKTNQEKEFNKLSERHMHVQL-----QLDNLRLENEKLLESKACLQDSYDNL 528
Cdd:PTZ00121 1348 AKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAkkkaeEDKKKADELKKAAAAKKKADEAKKKA 1427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 529 QEIMKfeIDQLSRNLQNFKKENETLKsdlnnlmellEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAKCE 608
Cdd:PTZ00121 1428 EEKKK--ADEAKKKAEEAKKADEAKK----------KAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEA 1495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 609 QQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSvcEKTETIDTLK--QELKDINCKYNSALVDREE 686
Cdd:PTZ00121 1496 KKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA--EEKKKADELKkaEELKKAEEKKKAEEAKKAE 1573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 687 SRVLIKKQEVDILDLKETLRLRILSEDIErdmlcEDLAHATEQLNMLTEASKKHSGLLQsaQEELTKKEALIQELQHKLN 766
Cdd:PTZ00121 1574 EDKNMALRKAEEAKKAEEARIEEVMKLYE-----EEKKMKAEEAKKAEEAKIKAEELKK--AEEEKKKVEQLKKKEAEEK 1646
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 767 QKKEEVEQKKNEYNFKMRQLEHvmdSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTslehlvTKLNEDREVKN 846
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAK---KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEE------LKKKEAEEKKK 1717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 847 AEILRMKEQLREMENLRLESQQLIEKNWLLQGQLDDIKRQKEnsdqnhpdnQQLKNEQEESIKE-RLAKSKIVEEMLKMK 925
Cdd:PTZ00121 1718 AEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI---------AHLKKEEEKKAEEiRKEKEAVIEEELDEE 1788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 926 adlEEVQSALYNKEMECLRMTDEVERTQTLESKAF--QEKEQLRSKLEEMYEERERTSQEMEMLRKQVECLAEENGKLVG 1003
Cdd:PTZ00121 1789 ---DEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVinDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGN 1865
|
650 660 670
....*....|....*....|....*....|...
gi 2462496768 1004 HQNLHQKIQYVVRLKKENVRLAEETEKLRAENV 1036
Cdd:PTZ00121 1866 KEADFNKEKDLKEDDEEEIEEADEIEKIDKDDI 1898
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
741-997 |
2.62e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 741 SGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEdpqspktpphfqthLAKLLETQEQE 820
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA--------------LARRIRALEQE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 821 IEDGRASKTSLEHLVTKLNEDREVKNAEIlrmKEQLREMENLrleSQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQL 900
Cdd:COG4942 78 LAALEAELAELEKEIAELRAELEAQKEEL---AELLRALYRL---GRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 901 KNEQEESIKE-RLAKSKIVEEMLKMKADLEEVQSALynkemecLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYEERER 979
Cdd:COG4942 152 AEELRADLAElAALRAELEAERAELEALLAELEEER-------AALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
250
....*....|....*...
gi 2462496768 980 TSQEMEMLRKQVECLAEE 997
Cdd:COG4942 225 LEALIARLEAEAAAAAER 242
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
521-994 |
2.63e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 521 LQDSYDNLQEIMKfEIDQLSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSL---QFEEDKENSSKEiLKVLEAVR 597
Cdd:PRK03918 160 YENAYKNLGEVIK-EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSelpELREELEKLEKE-VKELEELK 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 598 QEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLmNQIQELRTSVCEKTETIDTLKQELKDINCKY 677
Cdd:PRK03918 238 EEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 678 NSALVDREESRVLIKKQEVDILDLKETLR-----LRILSEDIERDMLCEDLAHATEQLNML-TEASKKHSGLLQSAQEEL 751
Cdd:PRK03918 317 SRLEEEINGIEERIKELEEKEERLEELKKklkelEKRLEELEERHELYEEAKAKKEELERLkKRLTGLTPEKLEKELEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 752 TKKEALIQELQHKLNQKKEEVEQKKNEYNFKMRQLEhvmdsAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSL 831
Cdd:PRK03918 397 EKAKEEIEEEISKITARIGELKKEIKELKKAIEELK-----KAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEI 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 832 EHLVTKL-NEDREVKNA-----EILRMKEQLREMENLRLESQQL----IEKNW----LLQGQLDDIKRQKENSDQNHPDN 897
Cdd:PRK03918 472 EEKERKLrKELRELEKVlkkesELIKLKELAEQLKELEEKLKKYnleeLEKKAeeyeKLKEKLIKLKGEIKSLKKELEKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 898 QQLKNEQEE------SIKERLAK--SKIVEEMLKMKADLEEVQSAL---YNKEMECLRMTDEVERTQtleskafQEKEQL 966
Cdd:PRK03918 552 EELKKKLAElekkldELEEELAEllKELEELGFESVEELEERLKELepfYNEYLELKDAEKELEREE-------KELKKL 624
|
490 500
....*....|....*....|....*...
gi 2462496768 967 RSKLEEMYEERERTSQEMEMLRKQVECL 994
Cdd:PRK03918 625 EEELDKAFEELAETEKRLEELRKELEEL 652
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
810-1046 |
3.11e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 3.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 810 LAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREV---KNAEILRMKEQLREMENLRLESQQLIeknwLLQGQLDDIKR- 885
Cdd:pfam17380 308 KAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMameRERELERIRQEERKRELERIRQEEIA----MEISRMRELERl 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 886 QKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSAlynKEMECLRMTDEVERTQTLESKAFQEKEQ 965
Cdd:pfam17380 384 QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEA---RQREVRRLEEERAREMERVRLEEQERQQ 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 966 LRSKLEEMYEERERTSQEMEMlRKQVECLAEENGKLVGHQNLHQKIQYVvrLKKENVRLAEETEKLRAENVFLKEKKRSE 1045
Cdd:pfam17380 461 QVERLRQQEEERKRKKLELEK-EKRDRKRAEEQRRKILEKELEERKQAM--IEEERKRKLLEKEMEERQKAIYEEERRRE 537
|
.
gi 2462496768 1046 S 1046
Cdd:pfam17380 538 A 538
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
648-858 |
3.44e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 648 QIQELRTSVCEKTETIDTLKQELKDINCKYNSAlvdREESRVLIKKQEVDildlketlrlrilSEDIERDMLCEDLAHAT 727
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDAL---QERREALQRLAEYS-------------WDEIDVASAEREIAELE 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 728 EQLNMLTEASKKhsglLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQ 807
Cdd:COG4913 675 AELERLDASSDD----LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL 750
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2462496768 808 thlakLLETQEQEIEDGRASKtslehLVTKLNEDREVKNAEILRMKEQLRE 858
Cdd:COG4913 751 -----LEERFAAALGDAVERE-----LRENLEERIDALRARLNRAEEELER 791
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
528-795 |
4.21e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 528 LQEIMKFEIDQLSRNLQNFKKEN-ETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAvrqekqketak 606
Cdd:PRK05771 25 LHELGVVHIEDLKEELSNERLRKlRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEE----------- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 607 ceqqmaKVQKLEESLLATEKVISSLEksrdSDKKvvaDLMNQIQELrtsvcEKTETIDTlkqelkDINCKYNSALVDREE 686
Cdd:PRK05771 94 ------ELEKIEKEIKELEEEISELE----NEIK---ELEQEIERL-----EPWGNFDL------DLSLLLGFKYVSVFV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 687 SRVLIKKQEVDILDLKETLrLRILSEDIERDMLC-----EDLAHATEQLNMLtEASKKHSGLLQSAQEELTKKEALIQEL 761
Cdd:PRK05771 150 GTVPEDKLEELKLESDVEN-VEYISTDKGYVYVVvvvlkELSDEVEEELKKL-GFERLELEEEGTPSELIREIKEELEEI 227
|
250 260 270
....*....|....*....|....*....|....
gi 2462496768 762 QHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAE 795
Cdd:PRK05771 228 EKERESLLEELKELAKKYLEELLALYEYLEIELE 261
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
367-861 |
4.37e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.16 E-value: 4.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 367 EQAFEAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELFSSERiDWTKQQEELLSQLNVLEKQLQE 446
Cdd:TIGR04523 151 EKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK-KKIQKNKSLESQISELKKQNNQ 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 447 TQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKT---NQEKEFNKLSERHMHVQLQLDNLRLENEKLLESKAclQD 523
Cdd:TIGR04523 230 LKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKqlsEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE--QD 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 524 SYDNLQEIMKFEIDQLsRNLQNFKKENETLKSDLNNLMELLEAEKE--RNNKLSLQFE---------------EDKENSS 586
Cdd:TIGR04523 308 WNKELKSELKNQEKKL-EEIQNQISQNNKIISQLNEQISQLKKELTnsESENSEKQREleekqneieklkkenQSYKQEI 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 587 KEILKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTL 666
Cdd:TIGR04523 387 KNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESL 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 667 KQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETlrlRILSEDIERDMLCEDLAHATEQLNMLTEASKKHSGLLQS 746
Cdd:TIGR04523 467 ETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEE---KKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDL 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 747 AQEELTKKEALIQE-LQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGR 825
Cdd:TIGR04523 544 EDELNKDDFELKKEnLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAK 623
|
490 500 510
....*....|....*....|....*....|....*.
gi 2462496768 826 ASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMEN 861
Cdd:TIGR04523 624 KENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRN 659
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
744-1044 |
5.34e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 744 LQSAQEELTKKEALIQELQHKLNQKKEEVEqKKNEYNFKMRQLEHVMDSAaedpqspktpphfqthLAKLLETQEQEIED 823
Cdd:TIGR02168 181 LERTRENLDRLEDILNELERQLKSLERQAE-KAERYKELKAELRELELAL----------------LVLRLEELREELEE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 824 GRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMENlrlESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQLKNE 903
Cdd:TIGR02168 244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEE---EIEELQKELYALANEISRLEQQKQILRERLANLERQLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 904 QEESIKERLAKSKIVEEML-KMKADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYE------- 975
Cdd:TIGR02168 321 LEAQLEELESKLDELAEELaELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELqiaslnn 400
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462496768 976 ERERTSQEMEMLRKQVECLAEENGKLVGHQNLHQKIQYVVRLKKENVRLAEETEKLRAENVFLKEKKRS 1044
Cdd:TIGR02168 401 EIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREE 469
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
593-843 |
5.35e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 5.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 593 LEAVRQEKQK---ETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKV------VADLMNQIQELRTSVCEktetI 663
Cdd:COG4913 612 LAALEAELAEleeELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVasaereIAELEAELERLDASSDD----L 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 664 DTLKQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETL-RLRILSEDIERDMLCEDLAHATEQLNMLTEAskkhsG 742
Cdd:COG4913 688 AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELdELQDRLEAAEDLARLELRALLEERFAAALGD-----A 762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 743 LLQSAQEELTKKealIQELQHKLNQKKEEVEQKKNEYNFKMRQLEHVMDSAAEDpqspktPPHFQTHLAKL----LETQE 818
Cdd:COG4913 763 VERELRENLEER---IDALRARLNRAEEELERAMRAFNREWPAETADLDADLES------LPEYLALLDRLeedgLPEYE 833
|
250 260
....*....|....*....|....*..
gi 2462496768 819 QEIED--GRASKTSLEHLVTKLNEDRE 843
Cdd:COG4913 834 ERFKEllNENSIEFVADLLSKLRRAIR 860
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
41-599 |
5.65e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 40.83 E-value: 5.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 41 TRDKKKTNYMEYFQEAMLFFKKSEQEKKSLIEKVTQLEDLTLKKEKFI-------QSNKMI-VKFREDQIIRLEKLHKES 112
Cdd:COG5022 861 FSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIielkkslSSDLIEnLEFKTELIARLKKLLNNI 940
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 113 RGGFLPE---EQDRLLSELRNEIQTLREQIEHHPRVAKYamENHSLREENRRLRLLEPVKRAqemdAQTIAKLEKAFSEI 189
Cdd:COG5022 941 DLEEGPSieyVKLPELNKLHEVESKLKETSEEYEDLLKK--STILVREGNKANSELKNFKKE----LAELSKQYGALQES 1014
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 190 SGMEKSDKNQQGFSPKAQKEPClFANTEKLKAQLLQIQTELNNSKQEY--EEFKELTRKRQLELESELQ-SLQKANLNLE 266
Cdd:COG5022 1015 TKQLKELPVEVAELQSASKIIS-SESTELSILKPLQKLKGLLLLENNQlqARYKALKLRRENSLLDDKQlYQLESTENLL 1093
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 267 NLLEAtKACKRQEVSQLNKIHAETlKLKNVMWIYNDLfnLENAGFFPIQIITTPTKAYQLHS--------RPVPKLSPEM 338
Cdd:COG5022 1094 KTINV-KDLEVTNRNLVKPANVLQ-FIVAQMIKLNLL--QEISKFLSQLVNTLEPVFQKLSVlqleldglFWEANLEALP 1169
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 339 GSFGSLYTQNSSILDNDILNEPvppemneqaFEAISEELRTVQEQMSALQAKLDEEEHKNLKLQQHVDKLEHHSTQMQEL 418
Cdd:COG5022 1170 SPPPFAALSEKRLYQSALYDEK---------SKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSL 1240
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 419 --FSSERIDWTKQQ----EELLSQLNVLEKQLQETQTKNDFLKSEVHDLRVVLHSADKELSSVKLEYSSFKTNQEKEFNK 492
Cdd:COG5022 1241 kgFNNLNKKFDTPAsmsnEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNS 1320
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 493 LSERHMHVQLQLDNLRLENEKLLESKACLQDSYDNLQEIMkfEIDQLSRNLQNFkkENETLKSDLNNLMELLEAEKERNN 572
Cdd:COG5022 1321 EELDDWCREFEISDVDEELEELIQAVKVLQLLKDDLNKLD--ELLDACYSLNPA--EIQNLKSRYDPADKENNLPKEILK 1396
|
570 580
....*....|....*....|....*..
gi 2462496768 573 KLSLQFEEDKENSSKEILKVLEAVRQE 599
Cdd:COG5022 1397 KIEALLIKQELQLSLEGKDETEVHLSE 1423
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
382-990 |
5.96e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.58 E-value: 5.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 382 EQMSALQAKLDEEEHKNLKLQQHVDKLEhhsTQMQELFSSERIDWTKQQEELlsqlnvleKQLQETQTKNDFLKSEVHDL 461
Cdd:pfam10174 226 AKTKALQTVIEMKDTKISSLERNIRDLE---DEVQMLKTNGLLHTEDREEEI--------KQMEVYKSHSKFMKNKIDQL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 462 rvvlhsaDKELSSVKLEYSSFKTNQEKEFNKLSERHMHVQLQLDNLRLENEKllesKACLQDSYDNLQ---EIMKFEIDQ 538
Cdd:pfam10174 295 -------KQELSKKESELLALQTKLETLTNQNSDCKQHIEVLKESLTAKEQR----AAILQTEVDALRlrlEEKESFLNK 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 539 LSRNLQNFKKENETLKSDLNNLMELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAKCEQQMAkVQKLE 618
Cdd:pfam10174 364 KTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTA-LTTLE 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 619 ESLLATEKVISSLEKSRDSDKKvvadlmnqiqelrtsvcEKTETIDTLKQELKDINCKYNSALVDREEsrvlikkQEVDI 698
Cdd:pfam10174 443 EALSEKERIIERLKEQREREDR-----------------ERLEELESLKKENKDLKEKVSALQPELTE-------KESSL 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 699 LDLKEtlrlrilsedierdmlcedlaHATeqlNMLTEASKKHSGLLQSAQEELTKKEALIQ-ELQHKLNQKKEEVEQKKN 777
Cdd:pfam10174 499 IDLKE---------------------HAS---SLASSGLKKDSKLKSLEIAVEQKKEECSKlENQLKKAHNAEEAVRTNP 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 778 EYNFKMRQLEHVMDSAAEDPQSPktpphfQTHLAKLLET-QEQEIEdgrasktslehlvtKLNEDREVKNAEIL---RMK 853
Cdd:pfam10174 555 EINDRIRLLEQEVARYKEESGKA------QAEVERLLGIlREVENE--------------KNDKDKKIAELESLtlrQMK 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 854 EQLREMENLRLESQQLIEKNwllQGQLDDIKRQKENSDQNHpdnqqlKNEQEESIKERLAKSKivEEMLKMKADLEEVQS 933
Cdd:pfam10174 615 EQNKKVANIKHGQQEMKKKG---AQLLEEARRREDNLADNS------QQLQLEELMGALEKTR--QELDATKARLSSTQQ 683
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462496768 934 ALYNKE--MECLRMTDEVERTQTLESK------AFQEKEQLRSKLEEMYEERERTSQEMEMLRKQ 990
Cdd:pfam10174 684 SLAEKDghLTNLRAERRKQLEEILEMKqeallaAISEKDANIALLELSSSKKKKTQEEVMALKRE 748
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
61-271 |
6.57e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 61 KKSEQEKKSLIEKVTQLEDLTLKKEKFIQSNKMIVKFREDQIIRLEKLHKESRGGFlpEEQDRLLSELRNEIQTLREQIE 140
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQEL--AALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 141 HHPR------VAKYAMENHSL-------REENRRLRLLEPVKRAQEMDAQTIAKLEKAFSEISGMEKSDKNQQgfspkaq 207
Cdd:COG4942 101 AQKEelaellRALYRLGRQPPlalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER------- 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462496768 208 kepclfANTEKLKAQLLQIQTELNNSKQEYEEFKELTRKRQLELESELQSLQKANLNLENLLEA 271
Cdd:COG4942 174 ------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
612-998 |
7.39e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.41 E-value: 7.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 612 AKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRtsvcEKTETIDTLKQELKDINCKYNSALVDREESRVLI 691
Cdd:PRK02224 206 ERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHE----ERREELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 692 KKQEVDILDLK-----------------ETLRLRI--LSEDIE--RDMLCE---DLAHATEQLNMLTEASKKHSGLLQSA 747
Cdd:PRK02224 282 RDLRERLEELEeerddllaeaglddadaEAVEARReeLEDRDEelRDRLEEcrvAAQAHNEEAESLREDADDLEERAEEL 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 748 QEELTKKEALIQELQHKLNQKKEEVEQKKNEynfkMRQLEHVMDSAAEDPQSpktpphFQTHLAKLLETQEQEIEDGRAS 827
Cdd:PRK02224 362 REEAAELESELEEAREAVEDRREEIEELEEE----IEELRERFGDAPVDLGN------AEDFLEELREERDELREREAEL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 828 KTSLEHLVTKLNEDRE-------------VKNAEILRMKEQLRE-MENLRLESQQLIEKNWLLQGQLDDIK------RQK 887
Cdd:PRK02224 432 EATLRTARERVEEAEAlleagkcpecgqpVEGSPHVETIEEDRErVEELEAELEDLEEEVEEVEERLERAEdlveaeDRI 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 888 ENSDQNHPDNQQLKNEQEESIKERLAKskiVEEMLKMKADLE---EVQSALYNKEMEclRMTDEVERTQTLESKAFQEKE 964
Cdd:PRK02224 512 ERLEERREDLEELIAERRETIEEKRER---AEELRERAAELEaeaEEKREAAAEAEE--EAEEAREEVAELNSKLAELKE 586
|
410 420 430
....*....|....*....|....*....|....*.
gi 2462496768 965 QLRS--KLEEMYEERERTSQEMEMLRKQVECLAEEN 998
Cdd:PRK02224 587 RIESleRIRTLLAAIADAEDEIERLREKREALAELN 622
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
578-992 |
8.51e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.14 E-value: 8.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 578 FEEDKENSSKEILKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKVVADLMNQIQELRT--S 655
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKllQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 656 VCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETLRLRILSEDIERDMLCEDLAHATEQLNMLTE 735
Cdd:COG4717 127 LLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 736 ASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEevEQKKNEYNFKMRQLEHVMDSAAEDPQSPKTPPHFQTHLAKLLE 815
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENELEAAAL--EERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLG 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 816 TQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMENLRLESQQLIEKNWL-------LQGQLDDIKRQKE 888
Cdd:COG4717 285 LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDrieelqeLLREAEELEEELQ 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462496768 889 NSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERTQTLE--SKAFQEKEQL 966
Cdd:COG4717 365 LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEelEELEEELEEL 444
|
410 420
....*....|....*....|....*.
gi 2462496768 967 RSKLEEMYEERERTSQEMEMLRKQVE 992
Cdd:COG4717 445 EEELEELREELAELEAELEQLEEDGE 470
|
|
| |
