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Conserved domains on  [gi|2217349100|ref|XP_047305632|]
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protein SPMIP2 isoform X1 [Homo sapiens]

Protein Classification

DUF4562 domain-containing protein( domain architecture ID 10633464)

DUF4562 domain-containing protein similar to Homo sapiens C4orf45

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4562 pfam15123
Domain of unknown function (DUF4562); This family of proteins is functionally uncharacterized. ...
 22-133 4.76e-59

Domain of unknown function (DUF4562); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. There is a conserved HRYQNPW sequence motif. This family includes the human protein C4orf45.


:

Pssm-ID: 464515  Cd Length: 112  Bit Score: 180.23  E-value: 4.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217349100  22 GPDYIKDYLPKIHQHTSYVGEQHLALEKTGDLRYLWRPASNRSLPAKYKHEYVSEIGWRIPQYNFINKSRLGSGFHIKYE 101
Cdd:pfam15123   1 GPDYIKDYRVKVSQHTEYIGEKSPSLEGTSDLRYLWRPALPRSLPPKYKHEYVGEIGWGIPELSFINESRLHSGFHIKRG 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2217349100 102 ELSQASLDSITHRYQNPWQPKPHVLDMQGKQS 133
Cdd:pfam15123  81 EFRQAAEDRYTHRYQNPWQPKPDILDQQGGSS 112
 
Name Accession Description Interval E-value
DUF4562 pfam15123
Domain of unknown function (DUF4562); This family of proteins is functionally uncharacterized. ...
 22-133 4.76e-59

Domain of unknown function (DUF4562); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. There is a conserved HRYQNPW sequence motif. This family includes the human protein C4orf45.


Pssm-ID: 464515  Cd Length: 112  Bit Score: 180.23  E-value: 4.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217349100  22 GPDYIKDYLPKIHQHTSYVGEQHLALEKTGDLRYLWRPASNRSLPAKYKHEYVSEIGWRIPQYNFINKSRLGSGFHIKYE 101
Cdd:pfam15123   1 GPDYIKDYRVKVSQHTEYIGEKSPSLEGTSDLRYLWRPALPRSLPPKYKHEYVGEIGWGIPELSFINESRLHSGFHIKRG 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2217349100 102 ELSQASLDSITHRYQNPWQPKPHVLDMQGKQS 133
Cdd:pfam15123  81 EFRQAAEDRYTHRYQNPWQPKPDILDQQGGSS 112
 
Name Accession Description Interval E-value
DUF4562 pfam15123
Domain of unknown function (DUF4562); This family of proteins is functionally uncharacterized. ...
 22-133 4.76e-59

Domain of unknown function (DUF4562); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. There is a conserved HRYQNPW sequence motif. This family includes the human protein C4orf45.


Pssm-ID: 464515  Cd Length: 112  Bit Score: 180.23  E-value: 4.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217349100  22 GPDYIKDYLPKIHQHTSYVGEQHLALEKTGDLRYLWRPASNRSLPAKYKHEYVSEIGWRIPQYNFINKSRLGSGFHIKYE 101
Cdd:pfam15123   1 GPDYIKDYRVKVSQHTEYIGEKSPSLEGTSDLRYLWRPALPRSLPPKYKHEYVGEIGWGIPELSFINESRLHSGFHIKRG 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2217349100 102 ELSQASLDSITHRYQNPWQPKPHVLDMQGKQS 133
Cdd:pfam15123  81 EFRQAAEDRYTHRYQNPWQPKPDILDQQGGSS 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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