UPF0462 protein C4orf33 isoform X1 [Homo sapiens]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| DOMON_like super family | cl14783 | Domon-like ligand-binding domains; DOMON-like domains can be found in all three kindgoms of ... |
42-94 | 2.96e-04 | ||
Domon-like ligand-binding domains; DOMON-like domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases. The actual alignment was detected with superfamily member cd09627: Pssm-ID: 472705 Cd Length: 179 Bit Score: 40.00 E-value: 2.96e-04
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| Name | Accession | Description | Interval | E-value | ||
| DOMON_murB_like | cd09627 | Domon-like domain of UDP-N-acetylenolpyruvoylglucosamine reductase; ... |
42-94 | 2.96e-04 | ||
Domon-like domain of UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase (murB) catalyzes an essential step in peptidoglycan biosynthesis, the reduction of UDP-N-acetylglucosamine-enolpyruvate to UDP-N-acetylmuramate. A subset of these FAD-dependent enzymes contains a C-terminal DOMON-like domain. DOMON domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes; initially DOMON domains were suspected to confer protein-protein interactions. The DOMON-like domain in murB may bind a heme. Pssm-ID: 187685 Cd Length: 179 Bit Score: 40.00 E-value: 2.96e-04
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| Name | Accession | Description | Interval | E-value | |||
| DOMON_murB_like | cd09627 | Domon-like domain of UDP-N-acetylenolpyruvoylglucosamine reductase; ... |
42-94 | 2.96e-04 | |||
Domon-like domain of UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase (murB) catalyzes an essential step in peptidoglycan biosynthesis, the reduction of UDP-N-acetylglucosamine-enolpyruvate to UDP-N-acetylmuramate. A subset of these FAD-dependent enzymes contains a C-terminal DOMON-like domain. DOMON domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes; initially DOMON domains were suspected to confer protein-protein interactions. The DOMON-like domain in murB may bind a heme. Pssm-ID: 187685 Cd Length: 179 Bit Score: 40.00 E-value: 2.96e-04
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| CBM9_like_3 | cd09620 | DOMON-like type 9 carbohydrate binding module; Family 9 carbohydrate-binding modules (CBM9) ... |
56-146 | 3.10e-03 | |||
DOMON-like type 9 carbohydrate binding module; Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily may co-occur with various other domains. Pssm-ID: 187678 Cd Length: 200 Bit Score: 36.98 E-value: 3.10e-03
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