|
Name |
Accession |
Description |
Interval |
E-value |
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5662-6535 |
0e+00 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 1404.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5662 SSDKIPSIDKTLVNKVVHSSVCNILNDYGSQDSIWKNINSNGENLARRLTSAVINEIFQRQVNLIFCDEVSVSACLPLES 5741
Cdd:pfam15783 1 FLMKIPSIDKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5742 KDVVKKVQKLAQTASKECQTSSPYTIILPHKFLENVISALFSKIFSTISSTKTKEPEDNLSTELNFLQMKLVSAVATEIS 5821
Cdd:pfam15783 81 KDVKKKVQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEESEDNLLTELDFLQMKLVSTVETEIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5822 QDKYMTIQYVETLQSDDDEIIQLVVQSVYNNLLPQFGSQEIIQNCVTSGCKILSENIVDLVLREVASNQLQSYFCGELTP 5901
Cdd:pfam15783 161 KDEDMIIQYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGELTP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5902 HQCVEVENIVEKILKDVFQTTDVPLPKPSHADKLSYNIIEEIAVKFLSKLLSIFPKVHKERTKSLETDMQKITSKVLNSV 5981
Cdd:pfam15783 241 CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVFPKVDKEKNKSLETEMQKITSKILNSD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5982 QEFISKSKIKLVPPTKESPTVPVADNATIENIVNSIYTSVLKHSGSYTSVFKDLMGKSNVLSDTIGFLMVNAISNSEFQP 6061
Cdd:pfam15783 321 QEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNSEFQP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6062 QVEEEVSNSELVLEAVKIMEKVIKIIDELKSKEKSSSRKGLTLDAKLLEEVLALFLAKLIRLPSSSSKDEKNLSKTELNK 6141
Cdd:pfam15783 401 QEEEEVSSSELVLEAVKIMEKVVKIIDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLSKPELNK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6142 IASQLSKLVTAEISRSSISLIASDPEEHCLNPENTERIYQVVDSVYSNILQQSGTNKEFYYDIKDTNTAFPKKVASLIID 6221
Cdd:pfam15783 481 IASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNFVFPKKVASLIID 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6222 GVSSFPLDTINSTISNADLSGELDVNRIVQKAQEHAFNVIPELEQEKLDQNLSEEESPIKIVPHVGKKPVKIDPKIISEH 6301
Cdd:pfam15783 561 SVSSFPLDTSSSKNSDADLFGDLDINRIVEKAQEHAIKMEPDLEKEELDQDEEEEELPIKIVPHVGKKPIKIDPIIVSEH 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6302 LAVISIKTQPLEKLKQECLKRTGHSIAELRRASISGRNYS-LGSPDLEKRKTERRTSLDKTGRLDVKPLEAVARNSFQNI 6380
Cdd:pfam15783 641 LAVISIKTQPLEKLQMECLTRTGHSIAELRRASISGRSYSdTDASERGKRKRERRISLDGTGRLDVKPLEAVNRNSFQNL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6381 RKPDITKVELLKDVQSKNDLIVRLVAHDIDQVYLENYIKEERDSDEDEVVLTQTFAKEEGI-KVFEDQVKEVKKPIQSKL 6459
Cdd:pfam15783 721 RKPDITKVELLKDVKSKKDLIIRLVAHDIEQEESESEIGEISDSDEDEVVLQEVVGGEECEeELNEDQVKEKPKPIKSKV 800
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217327952 6460 -SPKSTLSTSSLKKFLSLSKCCQTTASANIESTEAISNQVIESKETHVKRAVAELDMATPKTMPETASSSWEEKPQC 6535
Cdd:pfam15783 801 pSPKPTTSTSSLKKFLSLSKCCQPTSSINIESIEASSNQEIESEETKVKRAVAELDMCTTKSTETDTSSSWEKKTQK 877
|
|
| FSIP2 super family |
cl24371 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
3804-4368 |
4.85e-24 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
The actual alignment was detected with superfamily member pfam15783:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 112.53 E-value: 4.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3804 VSKIVDSVYYDVLQQYELKVACGNNPVYDNASIAEQITNGILLEILDYKLPSCFKEHLIPHSYYPLKPEIILQKLQSNLT 3883
Cdd:pfam15783 13 VNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQKVAQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3884 EFTSLPRSSSDYSTMLSHSFLEDVIRRLLSQlipppITCSSLGKKYLMSSD-----FNEMSTCIINKVMSAISKHKiwft 3958
Cdd:pfam15783 93 TASKECQTSSPYTIILPHLFLEIVISALLSK-----IFSTNAKAKTEESEDnllteLDFLQMKLVSTVETEISKDE---- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3959 iyDNQYLYT-------GKNLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEVlcH 4031
Cdd:pfam15783 164 --DMIIQYVeslhpndDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGEL--T 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4032 PRTPLDpVSTIVTQVLSEVIES-HRPQKQS----PLDIHLdsfVREIVARLLSKIFSPKHN--------TEIELKNMTQR 4098
Cdd:pfam15783 240 PCQCVE-VDSVVENILKDVIQTtPVPQPQPshalKLPYNI---IEEIAVKFLSKLLSVFPKvdkeknksLETEMQKITSK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4099 IVNSINRHFNKAKIHILYDDKEQAFFSFNTDIVDE-LATSVYRNALKQHGLDLAVDKE-SEDSGIFVENITNLIVAAISD 4176
Cdd:pfam15783 316 ILNSDQEFISKSKIKVVPPAKESATVPLADNATIEkVVNSVYTSVLKHSGSHTSVFKDlMGKSNVLSDIIGFLMVKEISN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4177 YLLHPLFSGDFSASTY---SNSVAENIVQDILSNISKSTEPSQSVplynTLLPYTFLEDMIRVLLSKLFSSASSlvLNRD 4253
Cdd:pfam15783 396 SEFQPQEEEEVSSSELvleAVKIMEKVVKIIDKLKSKEKSSSRKV----LMLDALFLEEALALFLAKLVKLPSA--SSKD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4254 TqKDISRVNFNDIASNLVSDIRMKVSQHEIRFSKEEEETKFIYSE--DDIQHLVDSVFANVVQTSGSQESAVQNITSSND 4331
Cdd:pfam15783 470 A-KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPEniEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNF 548
|
570 580 590
....*....|....*....|....*....|....*..
gi 2217327952 4332 ILIDRIAGFIIKHICQkhlQPFVSGKSLSSSDTYFDD 4368
Cdd:pfam15783 549 VFPKKVASLIIDSVSS---FPLDTSSSKNSDADLFGD 582
|
|
| FSIP2 super family |
cl24371 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4778-5166 |
1.11e-10 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
The actual alignment was detected with superfamily member pfam15783:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 69.00 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4778 YKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYYLLLEEIYDYQVQSLVSGELESSSYSYPQADNIIRNVL 4857
Cdd:pfam15783 9 DKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4858 NII---TKDSHALPPYITVLPHSLLEDMVYRLLGHVFpSTHTENELKEKKFPPDDEFVEAASKLTDEIIKEISEHEI--- 4931
Cdd:pfam15783 89 KVAqtaSKECQTSSPYTIILPHLFLEIVISALLSKIF-STNAKAKTEESEDNLLTELDFLQMKLVSTVETEISKDEDmii 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4932 --RLSMAEDNAESMQLepienLVDSICNNILKTSEFQAEVQKDAdKKGCSFLSK-LAGFIMKEIMYHHLQPFLHGEESSF 5008
Cdd:pfam15783 168 qyVESLHPNDDEIIQL-----VVQSIYNNLLPQFGSQEQIQNCV-GSGCRILSEtIVDLVLREVAGNQLQNYFSGELTPC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5009 SDlSDYDHVSELAKSGKEKT----QPSLYSATFLE-DIIIDLVHKFCSLLI---ITEDSKKNEMAELDIMGLALKLANSl 5080
Cdd:pfam15783 242 QC-VEVDSVVENILKDVIQTtpvpQPQPSHALKLPyNIIEEIAVKFLSKLLsvfPKVDKEKNKSLETEMQKITSKILNS- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5081 IREFK-KSDIKVLPNAEKMFSFPPIDKETVDKISNFVYEQFIEKCTSHDIQKGD---ESNIAIGMIAALTQKAISAFRIQ 5156
Cdd:pfam15783 320 DQEFIsKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDlmgKSNVLSDIIGFLMVKEISNSEFQ 399
|
410
....*....|
gi 2217327952 5157 PLFSGDWSST 5166
Cdd:pfam15783 400 PQEEEEVSSS 409
|
|
| FSIP2 super family |
cl24371 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4305-4796 |
7.87e-09 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
The actual alignment was detected with superfamily member pfam15783:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 62.84 E-value: 7.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4305 VDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKHICQKHLQ-----PFVSGKSLSSSDTYFDDERRQLF----- 4374
Cdd:pfam15783 17 VHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNlifedEVPASACLPLESKDVKKKVQKVAqtask 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4375 -------YTSVYSSTFLEDVISGVLRKIFhrvVGIVQTKSiRDSEDELFEkaeELIHL-------ITGEFSKAQVSIIdn 4440
Cdd:pfam15783 97 ecqtsspYTIILPHLFLEIVISALLSKIF---STNAKAKT-EESEDNLLT---ELDFLqmklvstVETEISKDEDMII-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4441 tEERLCLPPVERDVVKTIVDMVYSKVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEI--------FDFQIHPdlianl 4512
Cdd:pfam15783 168 -QYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVagnqlqnyFSGELTP------ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4513 pfksHSKLSANVLIQRVQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPL--NTSAEQSDTTKSDLSNTVIKL 4590
Cdd:pfam15783 241 ----CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVfpKVDKEKNKSLETEMQKITSKI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4591 INEIMSIISKHEICIIKYGNKKQSMISAK--DIQSMVDSIYAD-LSHSNIYQSITKDKKSISDIPVSKIASFIIKEIFNH 4667
Cdd:pfam15783 317 LNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSvLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4668 HIQSFLSEDKT---LLLAAVDQTYKLKAI--DPKQRELS----FIVNSSVFLEEVISELLCKILYAFSHNMLVTENPDrv 4738
Cdd:pfam15783 397 EFQPQEEEEVSsseLVLEAVKIMEKVVKIidKLKSKEKSssrkVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLS-- 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217327952 4739 KLKLTRIVTTLVNSIVLEFTTSEI-LVADNFDKNLCFSERyKEMVQKIVNSVYGKVLDQ 4796
Cdd:pfam15783 475 KPELNKIASQLTKSVTAEISKSNIsLVAADPEEIFLNPEN-IEMISQVVDSVYSNVLQQ 532
|
|
| DUF5401 super family |
cl38662 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
135-306 |
6.06e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
The actual alignment was detected with superfamily member pfam17380:
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 56.67 E-value: 6.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 135 RELNKYRQylTSLKLDFERnyIKEQRILakQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHryldmiSRK 214
Cdd:pfam17380 360 RELERIRQ--EEIAMEISR--MRELERL--QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ------IRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 215 LEQLERTAEEQRLflmdrEERRQREHTRRKLtlrrkiEEEWKTKEMLLLTRMAEDVKREERIEEQQHRNREESDRKKQDL 294
Cdd:pfam17380 428 EQEEARQREVRRL-----EEERAREMERVRL------EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI 496
|
170
....*....|..
gi 2217327952 295 LEKKMAYHLQKM 306
Cdd:pfam17380 497 LEKELEERKQAM 508
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5662-6535 |
0e+00 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 1404.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5662 SSDKIPSIDKTLVNKVVHSSVCNILNDYGSQDSIWKNINSNGENLARRLTSAVINEIFQRQVNLIFCDEVSVSACLPLES 5741
Cdd:pfam15783 1 FLMKIPSIDKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5742 KDVVKKVQKLAQTASKECQTSSPYTIILPHKFLENVISALFSKIFSTISSTKTKEPEDNLSTELNFLQMKLVSAVATEIS 5821
Cdd:pfam15783 81 KDVKKKVQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEESEDNLLTELDFLQMKLVSTVETEIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5822 QDKYMTIQYVETLQSDDDEIIQLVVQSVYNNLLPQFGSQEIIQNCVTSGCKILSENIVDLVLREVASNQLQSYFCGELTP 5901
Cdd:pfam15783 161 KDEDMIIQYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGELTP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5902 HQCVEVENIVEKILKDVFQTTDVPLPKPSHADKLSYNIIEEIAVKFLSKLLSIFPKVHKERTKSLETDMQKITSKVLNSV 5981
Cdd:pfam15783 241 CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVFPKVDKEKNKSLETEMQKITSKILNSD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5982 QEFISKSKIKLVPPTKESPTVPVADNATIENIVNSIYTSVLKHSGSYTSVFKDLMGKSNVLSDTIGFLMVNAISNSEFQP 6061
Cdd:pfam15783 321 QEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNSEFQP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6062 QVEEEVSNSELVLEAVKIMEKVIKIIDELKSKEKSSSRKGLTLDAKLLEEVLALFLAKLIRLPSSSSKDEKNLSKTELNK 6141
Cdd:pfam15783 401 QEEEEVSSSELVLEAVKIMEKVVKIIDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLSKPELNK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6142 IASQLSKLVTAEISRSSISLIASDPEEHCLNPENTERIYQVVDSVYSNILQQSGTNKEFYYDIKDTNTAFPKKVASLIID 6221
Cdd:pfam15783 481 IASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNFVFPKKVASLIID 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6222 GVSSFPLDTINSTISNADLSGELDVNRIVQKAQEHAFNVIPELEQEKLDQNLSEEESPIKIVPHVGKKPVKIDPKIISEH 6301
Cdd:pfam15783 561 SVSSFPLDTSSSKNSDADLFGDLDINRIVEKAQEHAIKMEPDLEKEELDQDEEEEELPIKIVPHVGKKPIKIDPIIVSEH 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6302 LAVISIKTQPLEKLKQECLKRTGHSIAELRRASISGRNYS-LGSPDLEKRKTERRTSLDKTGRLDVKPLEAVARNSFQNI 6380
Cdd:pfam15783 641 LAVISIKTQPLEKLQMECLTRTGHSIAELRRASISGRSYSdTDASERGKRKRERRISLDGTGRLDVKPLEAVNRNSFQNL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6381 RKPDITKVELLKDVQSKNDLIVRLVAHDIDQVYLENYIKEERDSDEDEVVLTQTFAKEEGI-KVFEDQVKEVKKPIQSKL 6459
Cdd:pfam15783 721 RKPDITKVELLKDVKSKKDLIIRLVAHDIEQEESESEIGEISDSDEDEVVLQEVVGGEECEeELNEDQVKEKPKPIKSKV 800
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217327952 6460 -SPKSTLSTSSLKKFLSLSKCCQTTASANIESTEAISNQVIESKETHVKRAVAELDMATPKTMPETASSSWEEKPQC 6535
Cdd:pfam15783 801 pSPKPTTSTSSLKKFLSLSKCCQPTSSINIESIEASSNQEIESEETKVKRAVAELDMCTTKSTETDTSSSWEKKTQK 877
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
3804-4368 |
4.85e-24 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 112.53 E-value: 4.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3804 VSKIVDSVYYDVLQQYELKVACGNNPVYDNASIAEQITNGILLEILDYKLPSCFKEHLIPHSYYPLKPEIILQKLQSNLT 3883
Cdd:pfam15783 13 VNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQKVAQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3884 EFTSLPRSSSDYSTMLSHSFLEDVIRRLLSQlipppITCSSLGKKYLMSSD-----FNEMSTCIINKVMSAISKHKiwft 3958
Cdd:pfam15783 93 TASKECQTSSPYTIILPHLFLEIVISALLSK-----IFSTNAKAKTEESEDnllteLDFLQMKLVSTVETEISKDE---- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3959 iyDNQYLYT-------GKNLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEVlcH 4031
Cdd:pfam15783 164 --DMIIQYVeslhpndDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGEL--T 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4032 PRTPLDpVSTIVTQVLSEVIES-HRPQKQS----PLDIHLdsfVREIVARLLSKIFSPKHN--------TEIELKNMTQR 4098
Cdd:pfam15783 240 PCQCVE-VDSVVENILKDVIQTtPVPQPQPshalKLPYNI---IEEIAVKFLSKLLSVFPKvdkeknksLETEMQKITSK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4099 IVNSINRHFNKAKIHILYDDKEQAFFSFNTDIVDE-LATSVYRNALKQHGLDLAVDKE-SEDSGIFVENITNLIVAAISD 4176
Cdd:pfam15783 316 ILNSDQEFISKSKIKVVPPAKESATVPLADNATIEkVVNSVYTSVLKHSGSHTSVFKDlMGKSNVLSDIIGFLMVKEISN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4177 YLLHPLFSGDFSASTY---SNSVAENIVQDILSNISKSTEPSQSVplynTLLPYTFLEDMIRVLLSKLFSSASSlvLNRD 4253
Cdd:pfam15783 396 SEFQPQEEEEVSSSELvleAVKIMEKVVKIIDKLKSKEKSSSRKV----LMLDALFLEEALALFLAKLVKLPSA--SSKD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4254 TqKDISRVNFNDIASNLVSDIRMKVSQHEIRFSKEEEETKFIYSE--DDIQHLVDSVFANVVQTSGSQESAVQNITSSND 4331
Cdd:pfam15783 470 A-KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPEniEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNF 548
|
570 580 590
....*....|....*....|....*....|....*..
gi 2217327952 4332 ILIDRIAGFIIKHICQkhlQPFVSGKSLSSSDTYFDD 4368
Cdd:pfam15783 549 VFPKKVASLIIDSVSS---FPLDTSSSKNSDADLFGD 582
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4778-5166 |
1.11e-10 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 69.00 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4778 YKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYYLLLEEIYDYQVQSLVSGELESSSYSYPQADNIIRNVL 4857
Cdd:pfam15783 9 DKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4858 NII---TKDSHALPPYITVLPHSLLEDMVYRLLGHVFpSTHTENELKEKKFPPDDEFVEAASKLTDEIIKEISEHEI--- 4931
Cdd:pfam15783 89 KVAqtaSKECQTSSPYTIILPHLFLEIVISALLSKIF-STNAKAKTEESEDNLLTELDFLQMKLVSTVETEISKDEDmii 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4932 --RLSMAEDNAESMQLepienLVDSICNNILKTSEFQAEVQKDAdKKGCSFLSK-LAGFIMKEIMYHHLQPFLHGEESSF 5008
Cdd:pfam15783 168 qyVESLHPNDDEIIQL-----VVQSIYNNLLPQFGSQEQIQNCV-GSGCRILSEtIVDLVLREVAGNQLQNYFSGELTPC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5009 SDlSDYDHVSELAKSGKEKT----QPSLYSATFLE-DIIIDLVHKFCSLLI---ITEDSKKNEMAELDIMGLALKLANSl 5080
Cdd:pfam15783 242 QC-VEVDSVVENILKDVIQTtpvpQPQPSHALKLPyNIIEEIAVKFLSKLLsvfPKVDKEKNKSLETEMQKITSKILNS- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5081 IREFK-KSDIKVLPNAEKMFSFPPIDKETVDKISNFVYEQFIEKCTSHDIQKGD---ESNIAIGMIAALTQKAISAFRIQ 5156
Cdd:pfam15783 320 DQEFIsKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDlmgKSNVLSDIIGFLMVKEISNSEFQ 399
|
410
....*....|
gi 2217327952 5157 PLFSGDWSST 5166
Cdd:pfam15783 400 PQEEEEVSSS 409
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4305-4796 |
7.87e-09 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 62.84 E-value: 7.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4305 VDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKHICQKHLQ-----PFVSGKSLSSSDTYFDDERRQLF----- 4374
Cdd:pfam15783 17 VHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNlifedEVPASACLPLESKDVKKKVQKVAqtask 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4375 -------YTSVYSSTFLEDVISGVLRKIFhrvVGIVQTKSiRDSEDELFEkaeELIHL-------ITGEFSKAQVSIIdn 4440
Cdd:pfam15783 97 ecqtsspYTIILPHLFLEIVISALLSKIF---STNAKAKT-EESEDNLLT---ELDFLqmklvstVETEISKDEDMII-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4441 tEERLCLPPVERDVVKTIVDMVYSKVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEI--------FDFQIHPdlianl 4512
Cdd:pfam15783 168 -QYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVagnqlqnyFSGELTP------ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4513 pfksHSKLSANVLIQRVQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPL--NTSAEQSDTTKSDLSNTVIKL 4590
Cdd:pfam15783 241 ----CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVfpKVDKEKNKSLETEMQKITSKI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4591 INEIMSIISKHEICIIKYGNKKQSMISAK--DIQSMVDSIYAD-LSHSNIYQSITKDKKSISDIPVSKIASFIIKEIFNH 4667
Cdd:pfam15783 317 LNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSvLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4668 HIQSFLSEDKT---LLLAAVDQTYKLKAI--DPKQRELS----FIVNSSVFLEEVISELLCKILYAFSHNMLVTENPDrv 4738
Cdd:pfam15783 397 EFQPQEEEEVSsseLVLEAVKIMEKVVKIidKLKSKEKSssrkVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLS-- 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217327952 4739 KLKLTRIVTTLVNSIVLEFTTSEI-LVADNFDKNLCFSERyKEMVQKIVNSVYGKVLDQ 4796
Cdd:pfam15783 475 KPELNKIASQLTKSVTAEISKSNIsLVAADPEEIFLNPEN-IEMISQVVDSVYSNVLQQ 532
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
135-306 |
6.06e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 56.67 E-value: 6.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 135 RELNKYRQylTSLKLDFERnyIKEQRILakQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHryldmiSRK 214
Cdd:pfam17380 360 RELERIRQ--EEIAMEISR--MRELERL--QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ------IRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 215 LEQLERTAEEQRLflmdrEERRQREHTRRKLtlrrkiEEEWKTKEMLLLTRMAEDVKREERIEEQQHRNREESDRKKQDL 294
Cdd:pfam17380 428 EQEEARQREVRRL-----EEERAREMERVRL------EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI 496
|
170
....*....|..
gi 2217327952 295 LEKKMAYHLQKM 306
Cdd:pfam17380 497 LEKELEERKQAM 508
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
134-410 |
7.00e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 7.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 134 LRELNKYRQYLTSLKLDFERNYIKEQRILAKQLHNIPEN----NQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHRYLD 209
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAkikaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEEN 1659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 210 MIsrKLEQLERTAEEQRlflMDREERRQREHTRRKLTLRRKIEEEWKTKEMLLLTRMAEDVKREERIE----------EQ 279
Cdd:PTZ00121 1660 KI--KAAEEAKKAEEDK---KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKkaeeenkikaEE 1734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 280 QHRNREESDRKKQDLL----EKKMAYHLQKMQDTGFNGEDIGKNTFKYRG---QDGTHGESSPKNKKKTSEDIMLVYPAG 352
Cdd:PTZ00121 1735 AKKEAEEDKKKAEEAKkdeeEKKKIAHLKKEEEKKAEEIRKEKEAVIEEEldeEDEKRRMEVDKKIKDIFDNFANIIEGG 1814
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217327952 353 DQNT-YKETHGHTANAAHQRQNSSNNfTKKNSASVVYQADVQDNGINQKrDGMVSKNSS 410
Cdd:PTZ00121 1815 KEGNlVINDSKEMEDSAIKEVADSKN-MQLEEADAFEKHKFNKNNENGE-DGNKEADFN 1871
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5662-6535 |
0e+00 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 1404.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5662 SSDKIPSIDKTLVNKVVHSSVCNILNDYGSQDSIWKNINSNGENLARRLTSAVINEIFQRQVNLIFCDEVSVSACLPLES 5741
Cdd:pfam15783 1 FLMKIPSIDKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5742 KDVVKKVQKLAQTASKECQTSSPYTIILPHKFLENVISALFSKIFSTISSTKTKEPEDNLSTELNFLQMKLVSAVATEIS 5821
Cdd:pfam15783 81 KDVKKKVQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEESEDNLLTELDFLQMKLVSTVETEIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5822 QDKYMTIQYVETLQSDDDEIIQLVVQSVYNNLLPQFGSQEIIQNCVTSGCKILSENIVDLVLREVASNQLQSYFCGELTP 5901
Cdd:pfam15783 161 KDEDMIIQYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGELTP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5902 HQCVEVENIVEKILKDVFQTTDVPLPKPSHADKLSYNIIEEIAVKFLSKLLSIFPKVHKERTKSLETDMQKITSKVLNSV 5981
Cdd:pfam15783 241 CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVFPKVDKEKNKSLETEMQKITSKILNSD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5982 QEFISKSKIKLVPPTKESPTVPVADNATIENIVNSIYTSVLKHSGSYTSVFKDLMGKSNVLSDTIGFLMVNAISNSEFQP 6061
Cdd:pfam15783 321 QEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNSEFQP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6062 QVEEEVSNSELVLEAVKIMEKVIKIIDELKSKEKSSSRKGLTLDAKLLEEVLALFLAKLIRLPSSSSKDEKNLSKTELNK 6141
Cdd:pfam15783 401 QEEEEVSSSELVLEAVKIMEKVVKIIDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLSKPELNK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6142 IASQLSKLVTAEISRSSISLIASDPEEHCLNPENTERIYQVVDSVYSNILQQSGTNKEFYYDIKDTNTAFPKKVASLIID 6221
Cdd:pfam15783 481 IASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNFVFPKKVASLIID 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6222 GVSSFPLDTINSTISNADLSGELDVNRIVQKAQEHAFNVIPELEQEKLDQNLSEEESPIKIVPHVGKKPVKIDPKIISEH 6301
Cdd:pfam15783 561 SVSSFPLDTSSSKNSDADLFGDLDINRIVEKAQEHAIKMEPDLEKEELDQDEEEEELPIKIVPHVGKKPIKIDPIIVSEH 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6302 LAVISIKTQPLEKLKQECLKRTGHSIAELRRASISGRNYS-LGSPDLEKRKTERRTSLDKTGRLDVKPLEAVARNSFQNI 6380
Cdd:pfam15783 641 LAVISIKTQPLEKLQMECLTRTGHSIAELRRASISGRSYSdTDASERGKRKRERRISLDGTGRLDVKPLEAVNRNSFQNL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 6381 RKPDITKVELLKDVQSKNDLIVRLVAHDIDQVYLENYIKEERDSDEDEVVLTQTFAKEEGI-KVFEDQVKEVKKPIQSKL 6459
Cdd:pfam15783 721 RKPDITKVELLKDVKSKKDLIIRLVAHDIEQEESESEIGEISDSDEDEVVLQEVVGGEECEeELNEDQVKEKPKPIKSKV 800
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217327952 6460 -SPKSTLSTSSLKKFLSLSKCCQTTASANIESTEAISNQVIESKETHVKRAVAELDMATPKTMPETASSSWEEKPQC 6535
Cdd:pfam15783 801 pSPKPTTSTSSLKKFLSLSKCCQPTSSINIESIEASSNQEIESEETKVKRAVAELDMCTTKSTETDTSSSWEKKTQK 877
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
3804-4368 |
4.85e-24 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 112.53 E-value: 4.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3804 VSKIVDSVYYDVLQQYELKVACGNNPVYDNASIAEQITNGILLEILDYKLPSCFKEHLIPHSYYPLKPEIILQKLQSNLT 3883
Cdd:pfam15783 13 VNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQKVAQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3884 EFTSLPRSSSDYSTMLSHSFLEDVIRRLLSQlipppITCSSLGKKYLMSSD-----FNEMSTCIINKVMSAISKHKiwft 3958
Cdd:pfam15783 93 TASKECQTSSPYTIILPHLFLEIVISALLSK-----IFSTNAKAKTEESEDnllteLDFLQMKLVSTVETEISKDE---- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3959 iyDNQYLYT-------GKNLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEVlcH 4031
Cdd:pfam15783 164 --DMIIQYVeslhpndDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGEL--T 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4032 PRTPLDpVSTIVTQVLSEVIES-HRPQKQS----PLDIHLdsfVREIVARLLSKIFSPKHN--------TEIELKNMTQR 4098
Cdd:pfam15783 240 PCQCVE-VDSVVENILKDVIQTtPVPQPQPshalKLPYNI---IEEIAVKFLSKLLSVFPKvdkeknksLETEMQKITSK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4099 IVNSINRHFNKAKIHILYDDKEQAFFSFNTDIVDE-LATSVYRNALKQHGLDLAVDKE-SEDSGIFVENITNLIVAAISD 4176
Cdd:pfam15783 316 ILNSDQEFISKSKIKVVPPAKESATVPLADNATIEkVVNSVYTSVLKHSGSHTSVFKDlMGKSNVLSDIIGFLMVKEISN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4177 YLLHPLFSGDFSASTY---SNSVAENIVQDILSNISKSTEPSQSVplynTLLPYTFLEDMIRVLLSKLFSSASSlvLNRD 4253
Cdd:pfam15783 396 SEFQPQEEEEVSSSELvleAVKIMEKVVKIIDKLKSKEKSSSRKV----LMLDALFLEEALALFLAKLVKLPSA--SSKD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4254 TqKDISRVNFNDIASNLVSDIRMKVSQHEIRFSKEEEETKFIYSE--DDIQHLVDSVFANVVQTSGSQESAVQNITSSND 4331
Cdd:pfam15783 470 A-KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPEniEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNF 548
|
570 580 590
....*....|....*....|....*....|....*..
gi 2217327952 4332 ILIDRIAGFIIKHICQkhlQPFVSGKSLSSSDTYFDD 4368
Cdd:pfam15783 549 VFPKKVASLIIDSVSS---FPLDTSSSKNSDADLFGD 582
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
3970-4468 |
4.71e-15 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 83.25 E-value: 4.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 3970 NLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEV---LCHPRTPLDPVSTIVTQV 4046
Cdd:pfam15783 12 LVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVpasACLPLESKDVKKKVQKVA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4047 LSEVIEShrpQKQSPLDIHLD-SFVREIVARLLSKIFSPKHNTE---------IELKNMTQRIVNSINRHFNKAK-IHIL 4115
Cdd:pfam15783 92 QTASKEC---QTSSPYTIILPhLFLEIVISALLSKIFSTNAKAKteesednllTELDFLQMKLVSTVETEISKDEdMIIQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4116 Y------DDKEqaffsfntdIVDELATSVYRNALKQHGLDLAVDKESEdSG--IFVENITNLIVAAISDYLLHPLFSGDF 4187
Cdd:pfam15783 169 YveslhpNDDE---------IIQLVVQSIYNNLLPQFGSQEQIQNCVG-SGcrILSETIVDLVLREVAGNQLQNYFSGEL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4188 SASTYSNSvaENIVQDILSNISKSTEPSQSVPLYNTLLPYTFLEDMIRVLLSKLFssasSLVLNRDTQKDISR-VNFNDI 4266
Cdd:pfam15783 239 TPCQCVEV--DSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLL----SVFPKVDKEKNKSLeTEMQKI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4267 ASNLVSDIRMKVSQHEIRFSKEEEETKFIYSED--DIQHLVDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKH 4344
Cdd:pfam15783 313 TSKILNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKE 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4345 ICQKHLQPFVsGKSLSSS-----------------DTYFDDERRQLFYTSVYSSTFLEDVISGVLRKIFhRVVGIVQTKS 4407
Cdd:pfam15783 393 ISNSEFQPQE-EEEVSSSelvleavkimekvvkiiDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLV-KLPSASSKDA 470
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217327952 4408 IRDSEDELFEKAEELIHLITGEFSKAQVSIIDNTEERLCLPPVERDVVKTIVDMVYSKVLQ 4468
Cdd:pfam15783 471 KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQ 531
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4778-5166 |
1.11e-10 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 69.00 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4778 YKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYYLLLEEIYDYQVQSLVSGELESSSYSYPQADNIIRNVL 4857
Cdd:pfam15783 9 DKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4858 NII---TKDSHALPPYITVLPHSLLEDMVYRLLGHVFpSTHTENELKEKKFPPDDEFVEAASKLTDEIIKEISEHEI--- 4931
Cdd:pfam15783 89 KVAqtaSKECQTSSPYTIILPHLFLEIVISALLSKIF-STNAKAKTEESEDNLLTELDFLQMKLVSTVETEISKDEDmii 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4932 --RLSMAEDNAESMQLepienLVDSICNNILKTSEFQAEVQKDAdKKGCSFLSK-LAGFIMKEIMYHHLQPFLHGEESSF 5008
Cdd:pfam15783 168 qyVESLHPNDDEIIQL-----VVQSIYNNLLPQFGSQEQIQNCV-GSGCRILSEtIVDLVLREVAGNQLQNYFSGELTPC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5009 SDlSDYDHVSELAKSGKEKT----QPSLYSATFLE-DIIIDLVHKFCSLLI---ITEDSKKNEMAELDIMGLALKLANSl 5080
Cdd:pfam15783 242 QC-VEVDSVVENILKDVIQTtpvpQPQPSHALKLPyNIIEEIAVKFLSKLLsvfPKVDKEKNKSLETEMQKITSKILNS- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 5081 IREFK-KSDIKVLPNAEKMFSFPPIDKETVDKISNFVYEQFIEKCTSHDIQKGD---ESNIAIGMIAALTQKAISAFRIQ 5156
Cdd:pfam15783 320 DQEFIsKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDlmgKSNVLSDIIGFLMVKEISNSEFQ 399
|
410
....*....|
gi 2217327952 5157 PLFSGDWSST 5166
Cdd:pfam15783 400 PQEEEEVSSS 409
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4305-4796 |
7.87e-09 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 62.84 E-value: 7.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4305 VDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKHICQKHLQ-----PFVSGKSLSSSDTYFDDERRQLF----- 4374
Cdd:pfam15783 17 VHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNlifedEVPASACLPLESKDVKKKVQKVAqtask 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4375 -------YTSVYSSTFLEDVISGVLRKIFhrvVGIVQTKSiRDSEDELFEkaeELIHL-------ITGEFSKAQVSIIdn 4440
Cdd:pfam15783 97 ecqtsspYTIILPHLFLEIVISALLSKIF---STNAKAKT-EESEDNLLT---ELDFLqmklvstVETEISKDEDMII-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4441 tEERLCLPPVERDVVKTIVDMVYSKVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEI--------FDFQIHPdlianl 4512
Cdd:pfam15783 168 -QYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVagnqlqnyFSGELTP------ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4513 pfksHSKLSANVLIQRVQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPL--NTSAEQSDTTKSDLSNTVIKL 4590
Cdd:pfam15783 241 ----CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVfpKVDKEKNKSLETEMQKITSKI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4591 INEIMSIISKHEICIIKYGNKKQSMISAK--DIQSMVDSIYAD-LSHSNIYQSITKDKKSISDIPVSKIASFIIKEIFNH 4667
Cdd:pfam15783 317 LNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSvLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4668 HIQSFLSEDKT---LLLAAVDQTYKLKAI--DPKQRELS----FIVNSSVFLEEVISELLCKILYAFSHNMLVTENPDrv 4738
Cdd:pfam15783 397 EFQPQEEEEVSsseLVLEAVKIMEKVVKIidKLKSKEKSssrkVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLS-- 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217327952 4739 KLKLTRIVTTLVNSIVLEFTTSEI-LVADNFDKNLCFSERyKEMVQKIVNSVYGKVLDQ 4796
Cdd:pfam15783 475 KPELNKIASQLTKSVTAEISKSNIsLVAADPEEIFLNPEN-IEMISQVVDSVYSNVLQQ 532
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4453-4963 |
1.03e-07 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 58.98 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4453 DVVKTIVDMVYS----KVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEIFDFQIHPDLIANLPFKSHSKLSANVLIQR 4528
Cdd:pfam15783 7 SIDKTLVNKVVHssvcNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKK 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4529 VQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPLNTSAEQS---DTTKSDLSNTVIKLINEIMSIISKHEICI 4605
Cdd:pfam15783 87 VQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEeseDNLLTELDFLQMKLVSTVETEISKDEDMI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4606 IKYgnkKQSMISAKD--IQSMVDSIYADL-----SHSNIYQSITKDKKSISDIpvskIASFIIKEIFNHHIQSFLSEDKT 4678
Cdd:pfam15783 167 IQY---VESLHPNDDeiIQLVVQSIYNNLlpqfgSQEQIQNCVGSGCRILSET----IVDLVLREVAGNQLQNYFSGELT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4679 ------------LLLAAVDQTYKLKAIDPKQ-RELSFIVnssvfLEEVISELLCKILYAFShnmlvteNPDRVKLKLT-- 4743
Cdd:pfam15783 240 pcqcvevdsvveNILKDVIQTTPVPQPQPSHaLKLPYNI-----IEEIAVKFLSKLLSVFP-------KVDKEKNKSLet 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4744 ---RIVTTLVNSIVLEFTTSEILVADNFDKNLCFSERYKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYY 4820
Cdd:pfam15783 308 emqKITSKILNSDQEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGF 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 4821 LLLEEIYDYQVQSLVSGELeSSSYSYPQADNIIRNVLNIITK-DSHALPP--YITVLPHSLLEDMVYRLLGHVFPSTHTE 4897
Cdd:pfam15783 388 LMVKEISNSEFQPQEEEEV-SSSELVLEAVKIMEKVVKIIDKlKSKEKSSsrKVLMLDALFLEEALALFLAKLVKLPSAS 466
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217327952 4898 NelKEKKFPPDDEFVEAASKLTDEIIKEISEHEIrlSMAEDNAESMQLEP-----IENLVDSICNNILKTS 4963
Cdd:pfam15783 467 S--KDAKNLSKPELNKIASQLTKSVTAEISKSNI--SLVAADPEEIFLNPeniemISQVVDSVYSNVLQQS 533
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
135-306 |
6.06e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 56.67 E-value: 6.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 135 RELNKYRQylTSLKLDFERnyIKEQRILakQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHryldmiSRK 214
Cdd:pfam17380 360 RELERIRQ--EEIAMEISR--MRELERL--QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ------IRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 215 LEQLERTAEEQRLflmdrEERRQREHTRRKLtlrrkiEEEWKTKEMLLLTRMAEDVKREERIEEQQHRNREESDRKKQDL 294
Cdd:pfam17380 428 EQEEARQREVRRL-----EEERAREMERVRL------EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI 496
|
170
....*....|..
gi 2217327952 295 LEKKMAYHLQKM 306
Cdd:pfam17380 497 LEKELEERKQAM 508
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
212-305 |
1.69e-06 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 51.19 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 212 SRKLEQLERTAEEQRlflmDREE--RRQREHTRRKL--TLRRKIEEEwktkemlLLTRMAEDVKREE--RIEEQQHRNRE 285
Cdd:pfam05672 13 ARILAEKRRQAREQR----EREEqeRLEKEEEERLRkeELRRRAEEE-------RARREEEARRLEEerRREEEERQRKA 81
|
90 100
....*....|....*....|
gi 2217327952 286 ESDRKKQDLLEKKMAYHLQK 305
Cdd:pfam05672 82 EEEAEEREQREQEEQERLQK 101
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
197-307 |
4.98e-05 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 49.53 E-value: 4.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 197 KDQERLMRHRYLDMISRKLEQLERTAEEQRLflmdREERRQREHTRrkltLRRKIEEEWKTK---EMLLLTRMAEDVKRE 273
Cdd:pfam13868 147 KEEEREEDERILEYLKEKAEREEEREAEREE----IEEEKEREIAR----LRAQQEKAQDEKaerDELRAKLYQEEQERK 218
|
90 100 110
....*....|....*....|....*....|....
gi 2217327952 274 ERIEEqqhrnREESDRKKQDLLEKKMAYHLQKMQ 307
Cdd:pfam13868 219 ERQKE-----REEAEKKARQRQELQQAREEQIEL 247
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
134-410 |
7.00e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 7.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 134 LRELNKYRQYLTSLKLDFERNYIKEQRILAKQLHNIPEN----NQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHRYLD 209
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAkikaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEEN 1659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 210 MIsrKLEQLERTAEEQRlflMDREERRQREHTRRKLTLRRKIEEEWKTKEMLLLTRMAEDVKREERIE----------EQ 279
Cdd:PTZ00121 1660 KI--KAAEEAKKAEEDK---KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKkaeeenkikaEE 1734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 280 QHRNREESDRKKQDLL----EKKMAYHLQKMQDTGFNGEDIGKNTFKYRG---QDGTHGESSPKNKKKTSEDIMLVYPAG 352
Cdd:PTZ00121 1735 AKKEAEEDKKKAEEAKkdeeEKKKIAHLKKEEEKKAEEIRKEKEAVIEEEldeEDEKRRMEVDKKIKDIFDNFANIIEGG 1814
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217327952 353 DQNT-YKETHGHTANAAHQRQNSSNNfTKKNSASVVYQADVQDNGINQKrDGMVSKNSS 410
Cdd:PTZ00121 1815 KEGNlVINDSKEMEDSAIKEVADSKN-MQLEEADAFEKHKFNKNNENGE-DGNKEADFN 1871
|
|
| ARGLU |
pfam15346 |
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ... |
210-299 |
1.18e-04 |
|
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.
Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 45.81 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 210 MISRKLEQLERTAEEQRlflmdREERRQREHTRRKLTLRRKIEEEWKTKEMLLLTRMAEDvkREERIEEQQHRNREESDR 289
Cdd:pfam15346 50 MEKQVLEELEREREAEL-----EEERRKEEEERKKREELERILEENNRKIEEAQRKEAEE--RLAMLEEQRRMKEERQRR 122
|
90
....*....|
gi 2217327952 290 KKQDLLEKKM 299
Cdd:pfam15346 123 EKEEEEREKR 132
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
213-307 |
1.46e-03 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 42.72 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 213 RKLEQLERTAEEQRLFLMDREERRQREHTR-RKLTLRRKIEEEWKTKEMLLLTRMAEDVKREERIEEQ----QHRNREES 287
Cdd:pfam05672 27 REREEQERLEKEEEERLRKEELRRRAEEERaRREEEARRLEEERRREEEERQRKAEEEAEEREQREQEeqerLQKQKEEA 106
|
90 100
....*....|....*....|...
gi 2217327952 288 DRKKQDLLEKK---MAYHLQKMQ 307
Cdd:pfam05672 107 EAKAREEAERQrqeREKIMQQEE 129
|
|
| CCDC34 |
pfam13904 |
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several ... |
197-292 |
3.25e-03 |
|
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several conserved tryptophan residues. The function is not known.
Pssm-ID: 464032 [Multi-domain] Cd Length: 221 Bit Score: 42.77 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 197 KDQERLMRHR-----YLDMISRKLEQLERTAEEQrlflmDREERRQREHTRRKLTLRRKIEE-------EWKTKEMLLLT 264
Cdd:pfam13904 82 EEQEAELRKRlakekYQEWLQRKARQQTKKREES-----HKQKAAESASKSLAKPERKVSQEeakevlqEWERKKLEQQQ 156
|
90 100
....*....|....*....|....*...
gi 2217327952 265 RmaedvKREERIEEQQHRNREESDRKKQ 292
Cdd:pfam13904 157 R-----KREEEQREQLKKEEEEQERKQL 179
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
198-305 |
3.34e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 43.75 E-value: 3.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 198 DQERLMRHRYLDMISRKLEQLERTAEEQRLFL---MDREERRQREHTRRKLTLRRKIEEEWKtkemlllTRMAEDVKREE 274
Cdd:pfam13868 202 ERDELRAKLYQEEQERKERQKEREEAEKKARQrqeLQQAREEQIELKERRLAEEAEREEEEF-------ERMLRKQAEDE 274
|
90 100 110
....*....|....*....|....*....|.
gi 2217327952 275 RIEEQQHRNREESDRKKQDLLEKKMAYHLQK 305
Cdd:pfam13868 275 EIEQEEAEKRRMKRLEHRRELEKQIEEREEQ 305
|
|
| ARGLU |
pfam15346 |
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ... |
213-308 |
3.39e-03 |
|
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.
Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 41.58 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 213 RKLEQL--ERTAEEqrlfLMDREERRQREHTRRKLTLRRKIEEEwktkemllltrMAEDVKREERIEEQQHRNREESDRK 290
Cdd:pfam15346 14 RRVEEAvaKRVEEE----LEKRKDEIEAEVERRVEEARKIMEKQ-----------VLEELEREREAELEEERRKEEEERK 78
|
90
....*....|....*...
gi 2217327952 291 KQDLLEKKMAYHLQKMQD 308
Cdd:pfam15346 79 KREELERILEENNRKIEE 96
|
|
| RIB43A |
pfam05914 |
RIB43A; This family consists of several RIB43A-like eukaryotic proteins. Ciliary and flagellar ... |
180-308 |
4.97e-03 |
|
RIB43A; This family consists of several RIB43A-like eukaryotic proteins. Ciliary and flagellar microtubules contain a specialized set of protofilaments, termed ribbons, that are composed of tubulin and several associated proteins. RIB43A was first characterized in the unicellular biflagellate, Chlamydomonas reinhardtii although highly related sequences are present in several higher eukaryotes including humans. The function of this protein is unknown although the structure of RIB43A and its association with the specialized protofilament ribbons and with basal bodies is relevant to the proposed role of ribbons in forming and stabilising doublet and triplet microtubules and in organizing their three-dimensional structure. Human RIB43A homologs could represent a structural requirement in centriole replication in dividing cells.
Pssm-ID: 461780 [Multi-domain] Cd Length: 372 Bit Score: 43.35 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 180 DVAQVQNWL----L---KEGTESIKDQERLMRHRYLDMISRKLEQLERTAEEQRLflmDREERRQREhtrrkltlrRKIE 252
Cdd:pfam05914 233 NLAEIYNHLtsdlLtenPEVAQSSLGPHRVIPDRWKGMSPEQLKEIRKEQEQQRE---EKERRREEE---------KQRD 300
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217327952 253 EEWKTkEMLLLTRMAEdvkREERieEQQHRNREEsdRKKQDLLEKKMAYHLQKMQD 308
Cdd:pfam05914 301 AEWDR-QRLELARAAL---LLER--EQQRLRREL--RRQLDEENLQLAQEQKARQE 348
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
199-308 |
6.03e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 42.98 E-value: 6.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 199 QERLMRHRYLDMISRKLEQLERTAEEQRLFLMDREERRQREHTRRKLTLRRKIEeewKTKEMLLLTRMAEDVKREERIE- 277
Cdd:pfam13868 215 QERKERQKEREEAEKKARQRQELQQAREEQIELKERRLAEEAEREEEEFERMLR---KQAEDEEIEQEEAEKRRMKRLEh 291
|
90 100 110
....*....|....*....|....*....|....*..
gi 2217327952 278 ----EQQHRNREES--DRKKQDLLEKKMAYHLQKMQD 308
Cdd:pfam13868 292 rrelEKQIEEREEQraAEREEELEEGERLREEEAERR 328
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
197-305 |
6.47e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 42.60 E-value: 6.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 197 KDQERLMRHRYLDMISRKLEQLERTAEEQRLFLMDR--EERRQREHTRRKLTLRRKIEEEwktkEMLLLTRMAEDVKREE 274
Cdd:pfam13868 175 REEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLyqEEQERKERQKEREEAEKKARQR----QELQQAREEQIELKER 250
|
90 100 110
....*....|....*....|....*....|...
gi 2217327952 275 RIEEQQHRNREESDR--KKQDLLEKKMAYHLQK 305
Cdd:pfam13868 251 RLAEEAEREEEEFERmlRKQAEDEEIEQEEAEK 283
|
|
| DUF4659 |
pfam15558 |
Domain of unknown function (DUF4659); This family of proteins is found in eukaryotes. Proteins ... |
197-297 |
8.44e-03 |
|
Domain of unknown function (DUF4659); This family of proteins is found in eukaryotes. Proteins in this family are typically between 427 and 674 amino acids in length. There are two completely conserved residues (D and I) that may be functionally important.
Pssm-ID: 464768 [Multi-domain] Cd Length: 374 Bit Score: 42.33 E-value: 8.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217327952 197 KDQERLMRHRYLdMISRKLEQLERtAEEQRLFLMDREERRQREHTRRKLTLRrkiEEEWKT----KEMLLLTRMAEDVKR 272
Cdd:pfam15558 43 KRQETLERERRL-LLQQSQEQWQA-EKEQRKARLGREERRRADRREKQVIEK---ESRWREqaedQENQRQEKLERARQE 117
|
90 100
....*....|....*....|....*
gi 2217327952 273 EERIEEQQHRNREESDRKKQDLLEK 297
Cdd:pfam15558 118 AEQRKQCQEQRLKEKEEELQALREQ 142
|
|
| |
