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Conserved domains on  [gi|2217268597|ref|XP_047279669|]
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sushi domain-containing protein 4 isoform X6 [Homo sapiens]

Protein Classification

CCP domain-containing protein( domain architecture ID 13332024)

CCP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 20-77 1.66e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


:

Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.63  E-value: 1.66e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217268597  20 CLRPLASSNGYVNISelQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:cd00033     1 CPPPPVPENGTVTGS--KGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTC 56
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 13-136 2.91e-08

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 53.89  E-value: 2.91e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217268597  13 NLPICQGCLRPLASSNGYVNISELQtsfpVGTVISYRCFPGFKLDGSAYLEC----LQNLIWSSSPPRClalEAQVCPLP 88
Cdd:PHA02927   79 NQCIKRRCPSPRDIDNGQLDIGGVD----FGSSITYSCNSGYQLIGESKSYCelgsTGSMVWNPEAPIC---ESVKCQSP 151

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2217268597  89 PMVSHGDfvcHPRPCERYNHGTVVEFYCDPGYSLTSDYKyITCQYGEW 136
Cdd:PHA02927  152 PSISNGR---HNGYEDFYTDGSVVTYSCNSGYSLIGNSG-VLCSGGEW 195
 
Name Accession Description Interval E-value
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 20-77 1.66e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.63  E-value: 1.66e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217268597  20 CLRPLASSNGYVNISelQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:cd00033     1 CPPPPVPENGTVTGS--KGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 20-77 3.04e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 55.23  E-value: 3.04e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217268597   20 CLRPLASSNGYVNISelQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:smart00032   1 CPPPPDIENGTVTSS--SGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
30-77 6.57e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 51.35  E-value: 6.57e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2217268597  30 YVNISELQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:pfam00084   9 NGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 13-136 2.91e-08

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 53.89  E-value: 2.91e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217268597  13 NLPICQGCLRPLASSNGYVNISELQtsfpVGTVISYRCFPGFKLDGSAYLEC----LQNLIWSSSPPRClalEAQVCPLP 88
Cdd:PHA02927   79 NQCIKRRCPSPRDIDNGQLDIGGVD----FGSSITYSCNSGYQLIGESKSYCelgsTGSMVWNPEAPIC---ESVKCQSP 151

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2217268597  89 PMVSHGDfvcHPRPCERYNHGTVVEFYCDPGYSLTSDYKyITCQYGEW 136
Cdd:PHA02927  152 PSISNGR---HNGYEDFYTDGSVVTYSCNSGYSLIGNSG-VLCSGGEW 195
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 85-139 6.56e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 48.68  E-value: 6.56e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2217268597   85 CPLPPMVSHGDFVCHPRPcerYNHGTVVEFYCDPGYSLTSDyKYITCQ-YGEWFPS 139
Cdd:smart00032   1 CPPPPDIENGTVTSSSGT---YSYGDTVTYSCDPGYTLIGS-STITCLeNGTWSPP 52
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 85-136 1.40e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 47.84  E-value: 1.40e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2217268597  85 CPLPPMVSHGDFVCHPrpcERYNHGTVVEFYCDPGYSLTSDyKYITCQ-YGEW 136
Cdd:cd00033     1 CPPPPVPENGTVTGSK---GSYSYGSTVTYSCNEGYTLVGS-STITCTeNGGW 49
Sushi pfam00084
Sushi repeat (SCR repeat);
85-136 1.03e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.49  E-value: 1.03e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2217268597  85 CPLPPMVSHGDFVChprPCERYNHGTVVEFYCDPGYSLTSDYKyITCQ-YGEW 136
Cdd:pfam00084   1 CPPPPDIPNGKVSA---TKNEYNYGASVSYECDPGYRLVGSPT-ITCQeDGTW 49
PHA02817 PHA02817
EEV Host range protein; Provisional
 2-77 6.78e-05

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 43.39  E-value: 6.78e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217268597   2 VSLCRDDGTWN-NLPICQ--GCLRPlASSNGYVNISELQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:PHA02817   68 NIICEKDGKWNkEFPVCKiiRCRFP-ALQNGFVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145
 
Name Accession Description Interval E-value
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 20-77 1.66e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.63  E-value: 1.66e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217268597  20 CLRPLASSNGYVNISelQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:cd00033     1 CPPPPVPENGTVTGS--KGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 20-77 3.04e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 55.23  E-value: 3.04e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217268597   20 CLRPLASSNGYVNISelQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:smart00032   1 CPPPPDIENGTVTSS--SGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
30-77 6.57e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 51.35  E-value: 6.57e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2217268597  30 YVNISELQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:pfam00084   9 NGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 13-136 2.91e-08

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 53.89  E-value: 2.91e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217268597  13 NLPICQGCLRPLASSNGYVNISELQtsfpVGTVISYRCFPGFKLDGSAYLEC----LQNLIWSSSPPRClalEAQVCPLP 88
Cdd:PHA02927   79 NQCIKRRCPSPRDIDNGQLDIGGVD----FGSSITYSCNSGYQLIGESKSYCelgsTGSMVWNPEAPIC---ESVKCQSP 151

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2217268597  89 PMVSHGDfvcHPRPCERYNHGTVVEFYCDPGYSLTSDYKyITCQYGEW 136
Cdd:PHA02927  152 PSISNGR---HNGYEDFYTDGSVVTYSCNSGYSLIGNSG-VLCSGGEW 195
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 85-139 6.56e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 48.68  E-value: 6.56e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2217268597   85 CPLPPMVSHGDFVCHPRPcerYNHGTVVEFYCDPGYSLTSDyKYITCQ-YGEWFPS 139
Cdd:smart00032   1 CPPPPDIENGTVTSSSGT---YSYGDTVTYSCDPGYTLIGS-STITCLeNGTWSPP 52
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 85-136 1.40e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 47.84  E-value: 1.40e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2217268597  85 CPLPPMVSHGDFVCHPrpcERYNHGTVVEFYCDPGYSLTSDyKYITCQ-YGEW 136
Cdd:cd00033     1 CPPPPVPENGTVTGSK---GSYSYGSTVTYSCNEGYTLVGS-STITCTeNGGW 49
PHA02639 PHA02639
EEV host range protein; Provisional
 20-138 1.26e-06

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 49.28  E-value: 1.26e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217268597  20 CLRPLASSNGYvnISELQTSFPVGTVISYRCFPGFKLDGSAYLECLQ---NLIWSSSPPRCLALEaqvCPLPPMVSHGDf 96
Cdd:PHA02639   22 CDKPDDISNGF--ITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKdknNAIWSNKAPFCMLKE---CNDPPSIINGK- 95

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 2217268597  97 VCHPRpcERYNHGTVVEFYCDP----GYSLTSDYKYITCQYGEWFP 138
Cdd:PHA02639   96 IYNKR--EMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKP 139
Sushi pfam00084
Sushi repeat (SCR repeat);
85-136 1.03e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.49  E-value: 1.03e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2217268597  85 CPLPPMVSHGDFVChprPCERYNHGTVVEFYCDPGYSLTSDYKyITCQ-YGEW 136
Cdd:pfam00084   1 CPPPPDIPNGKVSA---TKNEYNYGASVSYECDPGYRLVGSPT-ITCQeDGTW 49
PHA02817 PHA02817
EEV Host range protein; Provisional
 2-77 6.78e-05

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 43.39  E-value: 6.78e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217268597   2 VSLCRDDGTWN-NLPICQ--GCLRPlASSNGYVNISELQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRC 77
Cdd:PHA02817   68 NIICEKDGKWNkEFPVCKiiRCRFP-ALQNGFVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145
PHA02831 PHA02831
EEV host range protein; Provisional
 8-78 8.63e-05

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 43.44  E-value: 8.63e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217268597   8 DGTW-NNLPICQ--GCLRPlASSNGYVNIseLQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRCL 78
Cdd:PHA02831  126 NKQWvPKYPVCKliRCKYP-ALQNGFLNV--FEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCV 196
PHA02639 PHA02639
EEV host range protein; Provisional
 6-148 1.02e-04

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 43.50  E-value: 1.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217268597   6 RDDGTWNN-LPIC--QGCLRPLASSNGyvNISELQTSFPVGTVISYRCFP----GFKLDGSAYLECLQNLIWSSSPPRCL 78
Cdd:PHA02639   68 KNNAIWSNkAPFCmlKECNDPPSIING--KIYNKREMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICK 145

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217268597  79 ALEaqvCPLPPMvsHGDFVCHPRPCERYNHGTVVEFYCDPGYSLTSDyKYITCQY-GEWFPSYQVyCIKSE 148
Cdd:PHA02639  146 MIN---CRFPAL--QNGYINGIPSNKKFYYKTRVGFSCKSGFDLVGE-KYSTCNInATWFPSIPT-CVRNK 209
PHA02639 PHA02639
EEV host range protein; Provisional
 5-78 1.55e-04

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 42.73  E-value: 1.55e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217268597   5 CRDDGTWN-NLPICQ--GCLRPlASSNGYVNISELQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRCL 78
Cdd:PHA02639  131 CIQDKSWKpDPPICKmiNCRFP-ALQNGYINGIPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPTCV 206
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 11-138 1.28e-03

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 40.02  E-value: 1.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217268597  11 WN-NLPICQG--CLRPLASSNGYVNISElqTSFPVGTVISYRCFPGFKLDGSAYLEClQNLIWSSsPPRCLALEaqvCPl 87
Cdd:PHA02927  136 WNpEAPICESvkCQSPPSISNGRHNGYE--DFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSD-PPTCQIVK---CP- 207

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2217268597  88 PPMVSHGDFVCHPRpcERYNHGTVVEFYCDPGYSLTSDYKYITCQYGEWFP 138
Cdd:PHA02927  208 HPTISNGYLSSGFK--RSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQP 256
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 9-78 1.33e-03

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 39.64  E-value: 1.33e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217268597   9 GTWNNLPICQ--GCLRPlASSNGYVNiSELQTSFPVGTVISYRCFPGFKLDGSAYLECLQNLIWSSSPPRCL 78
Cdd:PHA02927  193 GEWSDPPTCQivKCPHP-TISNGYLS-SGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCV 262
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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