NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2077092491|ref|XP_042668845|]
View 

spermine oxidase [Centrocercus urophasianus]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PLN02568 super family cl33517
polyamine oxidase
23-527 2.66e-99

polyamine oxidase


The actual alignment was detected with superfamily member PLN02568:

Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 310.61  E-value: 2.66e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFT----DVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAEDNGL 98
Cdd:PLN02568    4 KKPRIVIIGAGMAGLTAANKLYTSSAAndmfELTVVEGGDRIGGRINTSEFGGERIEMGATWIHGIGGSPVYKIAQEAGS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  99 LEETTDGERSVG---RISLYSKNGVAYHLTnngqripkdVVEEFSDLYNEVYNLTQ---------EFFQRGKPVNAESQ- 165
Cdd:PLN02568   84 LESDEPWECMDGfpdRPKTVAEGGFEVDPS---------IVESISTLFRGLMDDAQgkliepsevDEVDFVKLAAKAARv 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 166 ------NSVGVFTR-------DVVRKRVKADPDDTEAVKRLKLAMIQQYLKVESCESSSHSMDEVSLSEFGEWTEIPGAH 232
Cdd:PLN02568  155 cesgggGSVGSFLRrgldaywDSVSADEQIKGYGGWSRKLLEEAIFTMHENTQRTYTSADDLSTLDLAAESEYRMFPGEE 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 233 HIIPCGFIKIVEILARSIPESVIQLRKPVKCIHWnqsvskeiervadhnSDLPeedkgsnVFVECEDCEFIPADHVIVTV 312
Cdd:PLN02568  235 ITIAKGYLSVIEALASVLPPGTIQLGRKVTRIEW---------------QDEP-------VKLHFADGSTMTADHVIVTV 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 313 SLGVLKK---RHESLFHPRLPEEKVMAIEKLGINTTDKIFLEFE-----EPFWSSECNSIQFVWeDEAESESLTYPEELW 384
Cdd:PLN02568  293 SLGVLKAgigEDSGLFSPPLPDFKTDAISRLGFGVVNKLFVELSprpdgSPEDVAKFPFLQMAF-HRSDSEARHDKIPWW 371
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 385 YKKICSfdvLYPPERYGHVLSGWICGEEALIMEKCDDETVAETCTEMLRKFTGNPNIP---------------------K 443
Cdd:PLN02568  372 MRRTAS---ICPIHKNSSVLLSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKRRVAGlgsqshplcnggassndgsrwK 448
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 444 PRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPY---AESSKTTPMQVMFSGEATHRKYYSTTHGAVLSGQREA 520
Cdd:PLN02568  449 FVKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDRMAEPLPRisdHDQAGGPPLQLLFAGEATHRTHYSTTHGAYFSGLREA 528

                  ....*..
gi 2077092491 521 AHLIEMY 527
Cdd:PLN02568  529 NRLLQHY 535
 
Name Accession Description Interval E-value
PLN02568 PLN02568
polyamine oxidase
23-527 2.66e-99

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 310.61  E-value: 2.66e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFT----DVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAEDNGL 98
Cdd:PLN02568    4 KKPRIVIIGAGMAGLTAANKLYTSSAAndmfELTVVEGGDRIGGRINTSEFGGERIEMGATWIHGIGGSPVYKIAQEAGS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  99 LEETTDGERSVG---RISLYSKNGVAYHLTnngqripkdVVEEFSDLYNEVYNLTQ---------EFFQRGKPVNAESQ- 165
Cdd:PLN02568   84 LESDEPWECMDGfpdRPKTVAEGGFEVDPS---------IVESISTLFRGLMDDAQgkliepsevDEVDFVKLAAKAARv 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 166 ------NSVGVFTR-------DVVRKRVKADPDDTEAVKRLKLAMIQQYLKVESCESSSHSMDEVSLSEFGEWTEIPGAH 232
Cdd:PLN02568  155 cesgggGSVGSFLRrgldaywDSVSADEQIKGYGGWSRKLLEEAIFTMHENTQRTYTSADDLSTLDLAAESEYRMFPGEE 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 233 HIIPCGFIKIVEILARSIPESVIQLRKPVKCIHWnqsvskeiervadhnSDLPeedkgsnVFVECEDCEFIPADHVIVTV 312
Cdd:PLN02568  235 ITIAKGYLSVIEALASVLPPGTIQLGRKVTRIEW---------------QDEP-------VKLHFADGSTMTADHVIVTV 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 313 SLGVLKK---RHESLFHPRLPEEKVMAIEKLGINTTDKIFLEFE-----EPFWSSECNSIQFVWeDEAESESLTYPEELW 384
Cdd:PLN02568  293 SLGVLKAgigEDSGLFSPPLPDFKTDAISRLGFGVVNKLFVELSprpdgSPEDVAKFPFLQMAF-HRSDSEARHDKIPWW 371
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 385 YKKICSfdvLYPPERYGHVLSGWICGEEALIMEKCDDETVAETCTEMLRKFTGNPNIP---------------------K 443
Cdd:PLN02568  372 MRRTAS---ICPIHKNSSVLLSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKRRVAGlgsqshplcnggassndgsrwK 448
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 444 PRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPY---AESSKTTPMQVMFSGEATHRKYYSTTHGAVLSGQREA 520
Cdd:PLN02568  449 FVKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDRMAEPLPRisdHDQAGGPPLQLLFAGEATHRTHYSTTHGAYFSGLREA 528

                  ....*..
gi 2077092491 521 AHLIEMY 527
Cdd:PLN02568  529 NRLLQHY 535
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
34-524 4.51e-75

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 244.32  E-value: 4.51e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  34 LAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHgNPVYHLAEDNGLLEETTDGERSVGRIS 113
Cdd:pfam01593   1 LAGLAAARELLRAGH-DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQ-PPLLALLKELGLEDRLVLPDPAPFYTV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 114 LYsKNGVAYHLTnnGQRIPKDVVE-----EFSDLYNEVYNLTQEFFQRGKPVNAESQNSvgvfTRDVVRKRVKADPDDTE 188
Cdd:pfam01593  79 LF-AGGRRYPGD--FRRVPAGWEGllefgRLLSIPEKLRLGLAALASDALDEFDLDDFS----LAESLLFLGRRGPGDVE 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 189 AVKRL----KLAMIQQYLKVESCESSSHSMdevSLSEFGEW-TEIPGAHHIIPCGFIK-IVEILARSIPESVIQLRKPVK 262
Cdd:pfam01593 152 VWDRLidpeLFAALPFASGAFAGDPSELSA---GLALPLLWaLLGEGGSLLLPRGGLGaLPDALAAQLLGGDVRLNTRVR 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 263 CIHWnqsvskeiervadhnsdlpEEDKGSnvfVECEDCEFIPADHVIVTVSLGVLKKRhesLFHPRLPEEKVMAIEKLGI 342
Cdd:pfam01593 229 SIDR-------------------EGDGVT---VTLTDGEVIEADAVIVTVPLGVLKRI---LFTPPLPPEKARAIRNLGY 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 343 NTTDKIFLEFEEPFWSSECNSIQFVWedeaesesltYPEELWYKKICSFDVLYPPERYGHVLSGWI-CGEEALIMEKCDD 421
Cdd:pfam01593 284 GPVNKVHLEFDRKFWPDLGLLGLLSE----------LLTGLGTAFSWLTFPNRAPPGKGLLLLVYVgPGDRARELEGLSD 353
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 422 ETVAETCTEMLRKFTGnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPL-PYaesskttpmqVMFSGEA 500
Cdd:pfam01593 354 EELLQAVLRDLRKLFG-EEAPEPLRVLVSDWHTDPWPRGSYSLPQYGPGHDDYRPLARTPdPG----------LFFAGEH 422
                         490       500
                  ....*....|....*....|....
gi 2077092491 501 THRKYYSTTHGAVLSGQREAAHLI 524
Cdd:pfam01593 423 TSTGYPGTVEGAIESGRRAARAVL 446
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
20-525 1.15e-67

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 224.80  E-value: 1.15e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  20 RRKRQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLG--HATFELGATWIHGSHGNpVYHLAEDNG 97
Cdd:COG1231     3 RRARGKDVVIVGAGLAGLAAARELRKAGL-DVTVLEARDRVGGRVWTLRFGddGLYAELGAMRIPPSHTN-LLALARELG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  98 LleETTDGERSVGRiSLYSKNGVAYHltnngQRIPKDVVEEFSDLYNE-VYNLTQEFFQRGKPVNAESQNSVgvftRDVV 176
Cdd:COG1231    81 L--PLEPFPNENGN-ALLYLGGKRVR-----AGEIAADLRGVAELLAKlLRALAAALDPWAHPAAELDRESL----AEWL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 177 RKRvkadPDDTEAvkrlkLAMIQQYLKVESCESSshsmDEVSLSEF---GEWTEIPGAHHIIPCGFIKIVEILARSIPES 253
Cdd:COG1231   149 RRN----GASPSA-----RRLLGLLGAGEYGADP----DELSLLDLlryAASAGGGAQQFRIVGGMDQLPRALAAELGDR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 254 vIQLRKPVKCIHWNqsvskeiervadhnsdlpeedkGSNVFVECEDCEFIPADHVIVTVSLGVLKKRHeslFHPRLPEEK 333
Cdd:COG1231   216 -IRLGAPVTRIRQD----------------------GDGVTVTTDDGGTVRADAVIVTVPPSVLRRIE---FDPPLPAAK 269
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFwssecnsiqfvWEDEAESESLTYPEELWYkkiCSFDVLYPPERYGHVLSGWICGEEA 413
Cdd:COG1231   270 RAAIQRLPYGAAIKVFLQFDRPF-----------WEEDGLYGGISLTDLPIR---QTWYPSNGPDGGAGVLLGYVGGDDA 335
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 414 LIMEKCDDETVAETCTEMLRKFTGNPnIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPyaesskttpmQ 493
Cdd:COG1231   336 RALAALSPEERVAAALEQLARIFGVY-AAEPVDYVSTDWGRDPWSRGAYAAAPPGQLTAAGPALAEPDG----------R 404
                         490       500       510
                  ....*....|....*....|....*....|..
gi 2077092491 494 VMFSGEATHRKYYSTTHGAVLSGQREAAHLIE 525
Cdd:COG1231   405 IHFAGEHTSDEWPGWVEGALESGERAAAEILA 436
crtI_fam TIGR02734
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ...
27-81 2.82e-09

phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 274273 [Multi-domain]  Cd Length: 495  Bit Score: 59.60  E-value: 2.82e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2077092491  27 IVVIGAGLAGLSAAkALLESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWI 81
Cdd:TIGR02734   1 AVVIGAGFGGLALA-IRLAAAGIPVTVVEQRDKPGGRAGVLEDDGFRFDTGPTVI 54
 
Name Accession Description Interval E-value
PLN02568 PLN02568
polyamine oxidase
23-527 2.66e-99

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 310.61  E-value: 2.66e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFT----DVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAEDNGL 98
Cdd:PLN02568    4 KKPRIVIIGAGMAGLTAANKLYTSSAAndmfELTVVEGGDRIGGRINTSEFGGERIEMGATWIHGIGGSPVYKIAQEAGS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  99 LEETTDGERSVG---RISLYSKNGVAYHLTnngqripkdVVEEFSDLYNEVYNLTQ---------EFFQRGKPVNAESQ- 165
Cdd:PLN02568   84 LESDEPWECMDGfpdRPKTVAEGGFEVDPS---------IVESISTLFRGLMDDAQgkliepsevDEVDFVKLAAKAARv 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 166 ------NSVGVFTR-------DVVRKRVKADPDDTEAVKRLKLAMIQQYLKVESCESSSHSMDEVSLSEFGEWTEIPGAH 232
Cdd:PLN02568  155 cesgggGSVGSFLRrgldaywDSVSADEQIKGYGGWSRKLLEEAIFTMHENTQRTYTSADDLSTLDLAAESEYRMFPGEE 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 233 HIIPCGFIKIVEILARSIPESVIQLRKPVKCIHWnqsvskeiervadhnSDLPeedkgsnVFVECEDCEFIPADHVIVTV 312
Cdd:PLN02568  235 ITIAKGYLSVIEALASVLPPGTIQLGRKVTRIEW---------------QDEP-------VKLHFADGSTMTADHVIVTV 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 313 SLGVLKK---RHESLFHPRLPEEKVMAIEKLGINTTDKIFLEFE-----EPFWSSECNSIQFVWeDEAESESLTYPEELW 384
Cdd:PLN02568  293 SLGVLKAgigEDSGLFSPPLPDFKTDAISRLGFGVVNKLFVELSprpdgSPEDVAKFPFLQMAF-HRSDSEARHDKIPWW 371
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 385 YKKICSfdvLYPPERYGHVLSGWICGEEALIMEKCDDETVAETCTEMLRKFTGNPNIP---------------------K 443
Cdd:PLN02568  372 MRRTAS---ICPIHKNSSVLLSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKRRVAGlgsqshplcnggassndgsrwK 448
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 444 PRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPY---AESSKTTPMQVMFSGEATHRKYYSTTHGAVLSGQREA 520
Cdd:PLN02568  449 FVKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDRMAEPLPRisdHDQAGGPPLQLLFAGEATHRTHYSTTHGAYFSGLREA 528

                  ....*..
gi 2077092491 521 AHLIEMY 527
Cdd:PLN02568  529 NRLLQHY 535
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
34-524 4.51e-75

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 244.32  E-value: 4.51e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  34 LAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHgNPVYHLAEDNGLLEETTDGERSVGRIS 113
Cdd:pfam01593   1 LAGLAAARELLRAGH-DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQ-PPLLALLKELGLEDRLVLPDPAPFYTV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 114 LYsKNGVAYHLTnnGQRIPKDVVE-----EFSDLYNEVYNLTQEFFQRGKPVNAESQNSvgvfTRDVVRKRVKADPDDTE 188
Cdd:pfam01593  79 LF-AGGRRYPGD--FRRVPAGWEGllefgRLLSIPEKLRLGLAALASDALDEFDLDDFS----LAESLLFLGRRGPGDVE 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 189 AVKRL----KLAMIQQYLKVESCESSSHSMdevSLSEFGEW-TEIPGAHHIIPCGFIK-IVEILARSIPESVIQLRKPVK 262
Cdd:pfam01593 152 VWDRLidpeLFAALPFASGAFAGDPSELSA---GLALPLLWaLLGEGGSLLLPRGGLGaLPDALAAQLLGGDVRLNTRVR 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 263 CIHWnqsvskeiervadhnsdlpEEDKGSnvfVECEDCEFIPADHVIVTVSLGVLKKRhesLFHPRLPEEKVMAIEKLGI 342
Cdd:pfam01593 229 SIDR-------------------EGDGVT---VTLTDGEVIEADAVIVTVPLGVLKRI---LFTPPLPPEKARAIRNLGY 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 343 NTTDKIFLEFEEPFWSSECNSIQFVWedeaesesltYPEELWYKKICSFDVLYPPERYGHVLSGWI-CGEEALIMEKCDD 421
Cdd:pfam01593 284 GPVNKVHLEFDRKFWPDLGLLGLLSE----------LLTGLGTAFSWLTFPNRAPPGKGLLLLVYVgPGDRARELEGLSD 353
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 422 ETVAETCTEMLRKFTGnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPL-PYaesskttpmqVMFSGEA 500
Cdd:pfam01593 354 EELLQAVLRDLRKLFG-EEAPEPLRVLVSDWHTDPWPRGSYSLPQYGPGHDDYRPLARTPdPG----------LFFAGEH 422
                         490       500
                  ....*....|....*....|....
gi 2077092491 501 THRKYYSTTHGAVLSGQREAAHLI 524
Cdd:pfam01593 423 TSTGYPGTVEGAIESGRRAARAVL 446
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
20-525 1.15e-67

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 224.80  E-value: 1.15e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  20 RRKRQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLG--HATFELGATWIHGSHGNpVYHLAEDNG 97
Cdd:COG1231     3 RRARGKDVVIVGAGLAGLAAARELRKAGL-DVTVLEARDRVGGRVWTLRFGddGLYAELGAMRIPPSHTN-LLALARELG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  98 LleETTDGERSVGRiSLYSKNGVAYHltnngQRIPKDVVEEFSDLYNE-VYNLTQEFFQRGKPVNAESQNSVgvftRDVV 176
Cdd:COG1231    81 L--PLEPFPNENGN-ALLYLGGKRVR-----AGEIAADLRGVAELLAKlLRALAAALDPWAHPAAELDRESL----AEWL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 177 RKRvkadPDDTEAvkrlkLAMIQQYLKVESCESSshsmDEVSLSEF---GEWTEIPGAHHIIPCGFIKIVEILARSIPES 253
Cdd:COG1231   149 RRN----GASPSA-----RRLLGLLGAGEYGADP----DELSLLDLlryAASAGGGAQQFRIVGGMDQLPRALAAELGDR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 254 vIQLRKPVKCIHWNqsvskeiervadhnsdlpeedkGSNVFVECEDCEFIPADHVIVTVSLGVLKKRHeslFHPRLPEEK 333
Cdd:COG1231   216 -IRLGAPVTRIRQD----------------------GDGVTVTTDDGGTVRADAVIVTVPPSVLRRIE---FDPPLPAAK 269
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFwssecnsiqfvWEDEAESESLTYPEELWYkkiCSFDVLYPPERYGHVLSGWICGEEA 413
Cdd:COG1231   270 RAAIQRLPYGAAIKVFLQFDRPF-----------WEEDGLYGGISLTDLPIR---QTWYPSNGPDGGAGVLLGYVGGDDA 335
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 414 LIMEKCDDETVAETCTEMLRKFTGNPnIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPyaesskttpmQ 493
Cdd:COG1231   336 RALAALSPEERVAAALEQLARIFGVY-AAEPVDYVSTDWGRDPWSRGAYAAAPPGQLTAAGPALAEPDG----------R 404
                         490       500       510
                  ....*....|....*....|....*....|..
gi 2077092491 494 VMFSGEATHRKYYSTTHGAVLSGQREAAHLIE 525
Cdd:COG1231   405 IHFAGEHTSDEWPGWVEGALESGERAAAEILA 436
PLN02268 PLN02268
probable polyamine oxidase
25-516 1.06e-51

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 182.19  E-value: 1.06e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  25 PRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHG-SHGNPVYHLAEDNGLLEETT 103
Cdd:PLN02268    1 PSVIVIGGGIAGIAAARALHDASF-KVTLLESRDRIGGRVHTDYSFGFPVDMGASWLHGvCNENPLAPLIGRLGLPLYRT 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 104 DGERSVgrisLYSKNGVAYHL-TNNGQRIPKDVVEEFSDLYNEVYNLTqeffqrgKPVNAESQNSVGV---FTRdVVRKR 179
Cdd:PLN02268   80 SGDNSV----LYDHDLESYALfDMDGNQVPQELVTKVGETFERILEET-------EKVRDEHEEDMSLlqaISI-VLERH 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 180 vkadPDdteavkrLKLA-----MIQQYL-KVESCESSShsMDEVSLSEFGEWTEIPGAHHIIPCGFIKIVEILARSIPes 253
Cdd:PLN02268  148 ----PE-------LRLEglaheVLQWYLcRMEGWFAAD--ADTISLKSWDQEELLEGGHGLMVRGYDPVINTLAKGLD-- 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 254 viqlrkpvkcIHWNQSVSKEIERVadhnsdlpeedkgSNVFVECEDCEFIPADHVIVTVSLGVLKKRHESlFHPRLPEEK 333
Cdd:PLN02268  213 ----------IRLNHRVTKIVRRY-------------NGVKVTVEDGTTFVADAAIIAVPLGVLKANIIK-FEPELPEWK 268
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFWSSecnsIQFVwedeAESESLTYPeelwykkiCS-FDVLYPPEryGH-VLSGWICGE 411
Cdd:PLN02268  269 EEAISDLGVGIENKIALHFDSVFWPN----VEFL----GVVAPTSYG--------CSyFLNLHKAT--GHpVLVYMPAGR 330
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 412 EALIMEKCDDETVAETCTEMLRKFTgnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPyaesskttp 491
Cdd:PLN02268  331 LARDIEKLSDEAAANFAMSQLKKML--PDATEPVQYLVSRWGSDPNSLGCYSYDLVGKPHDLYERLRAPVD--------- 399
                         490       500
                  ....*....|....*....|....*
gi 2077092491 492 mQVMFSGEATHRKYYSTTHGAVLSG 516
Cdd:PLN02268  400 -NLFFAGEATSSDFPGSVHGAYSTG 423
PLN02676 PLN02676
polyamine oxidase
15-533 1.29e-51

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 183.38  E-value: 1.29e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  15 LSSGLRRKRQPRIVVIGAGLAGLSAAKALLESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHG---NPVYH 91
Cdd:PLN02676   17 AVAAMDAKPSPSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRKANFAGVSVELGANWVEGVGGpesNPIWE 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  92 LAEDNGLLEETTDGERSvgRISLYSKNGVAYhltnngqriPKDVVEEFSDLYNEVYNLTQEFfqrGKPVNAESQNSVGVF 171
Cdd:PLN02676   97 LANKLKLRTFYSDFDNL--SSNIYKQDGGLY---------PKKVVQKSMKVADASDEFGENL---SISLSAKKAVDISIL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 172 TRDVVRKRVKADPddteavkrLKLAMIQQYLKVESCE-----SSSHSMDEVSLSEFGEWTEIPGAhhiiPCGFIKIVEIL 246
Cdd:PLN02676  163 TAQRLFGQVPKTP--------LEMVIDYYNYDYEFAEpprvtSLKNTEPNPTFVDFGEDEYFVAD----PRGYESLVYYL 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 247 ARS--------IPESVIQLRKPVKCIhwnqSVSKeiervadhnsdlpeedkgSNVFVECEDCEFIPADHVIVTVSLGVLK 318
Cdd:PLN02676  231 AEQflstksgkITDPRLKLNKVVREI----SYSK------------------NGVTVKTEDGSVYRAKYVIVSVSLGVLQ 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 319 krhESL--FHPRLPEEKVMAIEKLGINTTDKIFLEFEEPFWSSECNSIQFVWEDEAESeslTYPeeLWYKkicsFDVLYP 396
Cdd:PLN02676  289 ---SDLikFKPPLPDWKIEAIYQFDMAVYTKIFLKFPYKFWPSGPGTEFFLYAHERRG---YYP--FWQH----LENEYP 356
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 397 PErygHVLSGWICGEEALIMEKCDDETVAETCTEMLRKFTGnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEK 476
Cdd:PLN02676  357 GS---NVLFVTVTDEESRRIEQQPDSETKAEIMEVLRKMFG-PNIPEATDILVPRWWSNRFFKGSYSNWPIGVSRYEFDQ 432
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2077092491 477 LAKPLPyaesskttpmQVMFSGEATHRKYYSTTHGAVLSGqreaahlIEMYQDLLQC 533
Cdd:PLN02676  433 IRAPVG----------RVYFTGEHTSEKYNGYVHGAYLAG-------IDTANDLLEC 472
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
21-524 2.92e-41

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 158.62  E-value: 2.92e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  21 RKRQPRIVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQSVKLG----HATFELGATWIHGSHGNPVYHLAEDN 96
Cdd:PLN02328  235 GVEPANVVVVGAGLAGLVAARQLLSMGFK-VVVLEGRARPGGRVKTMKMKgdgvVAAADLGGSVLTGINGNPLGVLARQL 313
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  97 GL-LEETTDgersvgRISLYSKNGVAYHltnngQRIPKDVVEEFSDLYNEVYNLTQEFFQRGKPVNAESQNSVGVFtRDV 175
Cdd:PLN02328  314 GLpLHKVRD------ICPLYLPDGKAVD-----AEIDSKIEASFNKLLDRVCKLRQAMIEEVKSVDVNLGTALEAF-RHV 381
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 176 vrKRVKADPDDteavkrlkLAMIQQYL-KVESCESSSHSMDEVSLSEFGEWTEIPGAHHIIPCGFIKIVEILARSIPesv 254
Cdd:PLN02328  382 --YKVAEDPQE--------RMLLNWHLaNLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNDTFVRELAKDLP--- 448
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 255 IQLRKPVKCIHWnqsvskeiervadhnsdlpeedkGSN-VFVECEDCEFiPADHVIVTVSLGVLKKRHESlFHPRLPEEK 333
Cdd:PLN02328  449 IFYERTVESIRY-----------------------GVDgVIVYAGGQEF-HGDMVLCTVPLGVLKKGSIE-FYPELPQRK 503
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFWSSECNSIQFVWEDEAESESLTypeeLWYKkicsfdvlYPPERYGHVLSGWICGEEA 413
Cdd:PLN02328  504 KDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSMRGEFF----LFYS--------YSSVSGGPLLIALVAGDAA 571
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 414 limEKCDDETVAETCTEMLRKFTG--NPN---IPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPYAessk 488
Cdd:PLN02328  572 ---VKFETLSPVESVKRVLQILRGifHPKgivVPDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVGDG---- 644
                         490       500       510
                  ....*....|....*....|....*....|....*.
gi 2077092491 489 ttpmQVMFSGEATHRKYYSTTHGAVLSGQREAAHLI 524
Cdd:PLN02328  645 ----RVFFAGEATNKQYPATMHGAFLSGMREAANIL 676
PLN02529 PLN02529
lysine-specific histone demethylase 1
27-524 1.74e-36

lysine-specific histone demethylase 1


Pssm-ID: 178144 [Multi-domain]  Cd Length: 738  Bit Score: 144.26  E-value: 1.74e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  27 IVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQSVKLG----HATFELGATWIHGSHGNPVYHLAEDNGL-LEE 101
Cdd:PLN02529  163 VIIVGAGLAGLAAARQLLSFGFK-VVVLEGRNRPGGRVYTQKMGrkgqFAAVDLGGSVITGIHANPLGVLARQLSIpLHK 241
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 102 TTDgersvgRISLYSKNGVAYHltnngQRIPKDVVEEFSDLYNEVYNLTQEFFQRGKPVnaesqnSVG-VFTRdvvRKRV 180
Cdd:PLN02529  242 VRD------NCPLYKPDGALVD-----KEIDSNIEFIFNKLLDKVTELRQIMGGFANDI------SLGsVLER---LRQL 301
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 181 KADPDDTEAVKRLKLAMIQQYLKVESCES--SSHSMDEVSLSEFGewteipGAHHIIPCGFIKIVEILARSIPesvIQLR 258
Cdd:PLN02529  302 YGVARSTEERQLLDWHLANLEYANAGCLSdlSAAYWDQDDPYEMG------GDHCFLAGGNWRLINALCEGVP---IFYG 372
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 259 KPVKCIHWNQSvskEIERVAdhnsdlpeedkGSNVFvecedcefiPADHVIVTVSLGVLKKRHESlFHPRLPEEKVMAIE 338
Cdd:PLN02529  373 KTVDTIKYGND---GVEVIA-----------GSQVF---------QADMVLCTVPLGVLKKRTIR-FEPELPRRKLAAID 428
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 339 KLGINTTDKIFLEFEEPFWSSECNSIQFVwedeaeSESLTYPEE--LWYKkicsfdvlYPPERYGHVLSGWICGEEALIM 416
Cdd:PLN02529  429 RLGFGLLNKVAMVFPSVFWGEELDTFGCL------NESSNKRGEffLFYG--------YHTVSGGPALVALVAGEAAQRF 494
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 417 EKCDDETVAETCTEMLRKFTGNP--NIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAkplpyaessKTTPMQV 494
Cdd:PLN02529  495 ENTDPSTLLHRVLSVLRGIYNPKgiNVPDPIQTICTRWGSDPLSYGSYSHVRVQSSGSDYDILA---------ESVSGRL 565
                         490       500       510
                  ....*....|....*....|....*....|
gi 2077092491 495 MFSGEATHRKYYSTTHGAVLSGQREAAHLI 524
Cdd:PLN02529  566 FFAGEATTRQYPATMHGAFLSGLREASRIL 595
PLN03000 PLN03000
amine oxidase
27-523 6.30e-36

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 142.85  E-value: 6.30e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  27 IVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQSVKLGH----ATFELGATWIHGSHGNPVYHLAEDNGL-LEE 101
Cdd:PLN03000  187 VVIVGAGLSGLAAARQLMRFGFK-VTVLEGRKRPGGRVYTKKMEAnrvgAAADLGGSVLTGTLGNPLGIIARQLGSsLYK 265
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 102 TTDgersvgRISLYSKNGvayhltnngQRIPKDVVEEFSDLYNEVYNLTQEFFQRGKPVNAESQNSVGVFTRdvvrKRVK 181
Cdd:PLN03000  266 VRD------KCPLYRVDG---------KPVDPDVDLKVEVAFNQLLDKASKLRQLMGDVSMDVSLGAALETF----RQVS 326
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 182 ADPDDTEavkrlKLAMIQQYL-KVESCESSSHSMDEVSLSEFGEWTEIPGAHHIIPCGFIKIVEILARSIPesvIQLRKP 260
Cdd:PLN03000  327 GNDVATE-----EMGLFNWHLaNLEYANAGLVSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALAENVP---ILYEKT 398
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 261 VKCIHWNQSVSKEIervadhnsdlpeedKGSNVFvecedcefiPADHVIVTVSLGVLKKRHESlFHPRLPEEKVMAIEKL 340
Cdd:PLN03000  399 VQTIRYGSNGVKVI--------------AGNQVY---------EGDMVLCTVPLGVLKNGSIK-FVPELPQRKLDCIKRL 454
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 341 GINTTDKIFLEFEEPFWSSECNSIQFVWEDEaeseslTYPEE--LWYKkicsfdvlYPPERYGHVLSGWICGEEALIMEK 418
Cdd:PLN03000  455 GFGLLNKVAMLFPYVFWSTDLDTFGHLTEDP------NYRGEffLFYS--------YAPVAGGPLLIALVAGEAAHKFET 520
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 419 CDDETVAETCTEMLRKFTgNP---NIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPYAesskttpmQVM 495
Cdd:PLN03000  521 MPPTDAVTRVLHILRGIY-EPqgiNVPDPLQTVCTRWGGDPFSLGSYSNVAVGASGDDYDILAESVGDG--------RLF 591
                         490       500
                  ....*....|....*....|....*...
gi 2077092491 496 FSGEATHRKYYSTTHGAVLSGQREAAHL 523
Cdd:PLN03000  592 FAGEATTRRYPATMHGAFVTGLREAANM 619
PLN02976 PLN02976
amine oxidase
26-526 2.28e-33

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 135.77  E-value: 2.28e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491   26 RIVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQ------SVKLghatfELGATWIHGshgnpvyhlaednglL 99
Cdd:PLN02976   695 KIIVVGAGPAGLTAARHLQRQGFS-VTVLEARSRIGGRVYtdrsslSVPV-----DLGASIITG---------------V 753
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  100 EETTDGERSVGRISLY-SKNGVAYHLTNN---------GQRIPKDVVEEFSDLYNEVYN-LTQEFFQRGKPVNAESQN-- 166
Cdd:PLN02976   754 EADVATERRPDPSSLIcAQLGLELTVLNSdcplydvvtGEKVPADLDEALEAEYNSLLDdMVLLVAQKGEHAMKMSLEdg 833
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  167 -SVGVFTRDVVRKRVKADPDDTEAVKRLKLAMIQQYLKVESCESSSHS----------MD---------------EVSLS 220
Cdd:PLN02976   834 lEYALKRRRMPRPGVDIDETELGNAADDLYDSASTGVDGGHCEKESKEdvlsplerrvMNwhfahleygcaallkEVSLP 913
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  221 E---------FGewteipGAHHIIPCGFIKIVEILARSIPesviqlrkpvkcIHWNQSVSKEIERVADHNSDlpeEDKGS 291
Cdd:PLN02976   914 YwnqddvyggFG------GAHCMIKGGYSNVVESLAEGLD------------IHLNHVVTDVSYGSKDAGAS---GSSRK 972
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  292 NVFVECED-CEFIpADHVIVTVSLGVLKKrhESL-FHPRLPEEKVMAIEKLGINTTDKIFLEFEEPFWSsecNSIQFVWE 369
Cdd:PLN02976   973 KVKVSTSNgSEFL-GDAVLITVPLGCLKA--ETIkFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWD---DSVDYFGA 1046
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  370 DEAESESLTYPEELW-YKKIcsfdVLYPperyghVLSGWICGEEAL---IMEKCDDETVAETcteMLRKFTGNPNIPKPR 445
Cdd:PLN02976  1047 TAEETDLRGQCFMFWnVKKT----VGAP------VLIALVVGKAAIdgqSMSSSDHVNHALM---VLRKLFGEALVPDPV 1113
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  446 RILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLpyaESSkttpmqVMFSGEATHRKYYSTTHGAVLSGQREAAHLIE 525
Cdd:PLN02976  1114 ASVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPV---ENC------LFFAGEATCKEHPDTVGGAMMSGLREAVRIID 1184

                   .
gi 2077092491  526 M 526
Cdd:PLN02976  1185 I 1185
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
29-95 6.99e-16

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 72.18  E-value: 6.99e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2077092491  29 VIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAED 95
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGF-RVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFHGSDEPNVRDLLDE 66
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
24-331 1.65e-14

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 75.64  E-value: 1.65e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  24 QPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHgSHGNPVYHLAEDNGLLEETt 103
Cdd:COG1232     1 MKRVAVIGGGIAGLTAAYRLAKAGH-EVTVLEASDRVGGLIRTVEVDGFRIDRGPHSFL-TRDPEVLELLRELGLGDEL- 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 104 dgERSVGRISLYSKNGVAYhltnngqRIPKDVveeFSDLYN------EVYNLTQEFFQRGKPVNAESqnSVG-----VFT 172
Cdd:COG1232    78 --VWPNTRKSYIYYGGKLH-------PLPQGP---LALLRSpllslaGKLRALLELLAPRRPPGEDE--SLAefvrrRFG 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 173 RDVVRKRVK--------ADPDD---TEAVKRLKLAMIQQYLKVESCESSshSMDEVSLSEFGEWTEipgahhiipcGFIK 241
Cdd:COG1232   144 REVYERLVEpllegvyaGDPDElsaDWAFPRLKRLELEHGSLIKGALAL--RKGAKAGEVFGYLRG----------GLGT 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 242 IVEILARSIPESVIQLRKPVkcihwnqsvsKEIERVADHNSdlpeedkgsnvfVECEDCEFIPADHVIVTVSLGVLKKrh 321
Cdd:COG1232   212 LVEALAEALEAGEIRLGTRV----------TAIEREGGGWR------------VTTSDGETIEADAVVSATPAPALAR-- 267
                         330
                  ....*....|
gi 2077092491 322 esLFHPRLPE 331
Cdd:COG1232   268 --LLAPLPPE 275
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
23-98 3.21e-13

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 71.81  E-value: 3.21e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSvklghatfelgatWIHGSHGNPVyhlaeDNGL 98
Cdd:COG3349     2 MPPRVVVVGGGLAGLAAAVELAEAGF-RVTLLEARPRLGGRARS-------------FPDPDTGLPI-----DNGQ 58
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
22-81 2.09e-12

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 69.11  E-value: 2.09e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  22 KRQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWI 81
Cdd:COG1233     1 MMMYDVVVIGAGIGGLAAAALLARAGY-RVTVLEKNDTPGGRARTFERPGFRFDVGPSVL 59
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
23-78 1.94e-11

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 65.28  E-value: 1.94e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGA 78
Cdd:COG3380     2 SMPDIAIIGAGIAGLAAARALQDAGH-EVTVFEKSRGVGGRMATRRLDGGRFDHGA 56
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
25-78 1.67e-10

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 63.33  E-value: 1.67e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2077092491  25 PRIVVIGAGLAGLSAAKALLESGFT-DVTILEATDRIGGRVQSVKLGHATFELGA 78
Cdd:PRK11883    1 KKVAIIGGGITGLSAAYRLHKKGPDaDITLLEASDRLGGKIQTVRKDGFPIELGP 55
crtI_fam TIGR02734
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ...
27-81 2.82e-09

phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 274273 [Multi-domain]  Cd Length: 495  Bit Score: 59.60  E-value: 2.82e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2077092491  27 IVVIGAGLAGLSAAkALLESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWI 81
Cdd:TIGR02734   1 AVVIGAGFGGLALA-IRLAAAGIPVTVVEQRDKPGGRAGVLEDDGFRFDTGPTVI 54
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
23-62 3.79e-09

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 58.72  E-value: 3.79e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:COG2072     5 EHVDVVVIGAGQAGLAAAYHLRRAGI-DFVVLEKADDVGG 43
PRK07233 PRK07233
hypothetical protein; Provisional
26-81 7.22e-09

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 57.97  E-value: 7.22e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVqsvklghATFELGATWI 81
Cdd:PRK07233    1 KIAIVGGGIAGLAAAYRLAKRGH-EVTVFEADDQLGGLA-------ASFEFGGLPI 48
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
26-136 2.71e-07

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 52.84  E-value: 2.71e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVqsvkLGhatfELGATWIHGSHgnpvyhlaEDNG---LLEET 102
Cdd:COG1251   144 RVVVIGGGLIGLEAAAALRKRGL-EVTVVERAPRLLPRQ----LD----EEAGALLQRLL--------EALGvevRLGTG 206
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2077092491 103 TD---GERSVGRISLyskngvayhltNNGQRIPKDVV 136
Cdd:COG1251   207 VTeieGDDRVTGVRL-----------ADGEELPADLV 232
PRK07208 PRK07208
hypothetical protein; Provisional
25-62 2.94e-07

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 52.97  E-value: 2.94e-07
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 2077092491  25 PRIVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGG 62
Cdd:PRK07208    5 KSVVIIGAGPAGLTAAYELLKRGYP-VTVLEADPVVGG 41
PLN02576 PLN02576
protoporphyrinogen oxidase
26-101 5.61e-07

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 51.94  E-value: 5.61e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFTDVTILEATDRIGGRVQSVKlghatfELGATWIHGSH----GNPVYHLAEDNGLLEE 101
Cdd:PLN02576   14 DVAVVGAGVSGLAAAYALASKHGVNVLVTEARDRVGGNITSVS------EDGFIWEEGPNsfqpSDPELTSAVDSGLRDD 87
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
23-76 1.85e-06

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 49.94  E-value: 1.85e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFEL 76
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGI-RVTVVERAPPPRPDGRGIALSPRSLEL 54
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
25-64 2.91e-06

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 49.86  E-value: 2.91e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2077092491  25 PRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRV 64
Cdd:COG1148   141 KRALVIGGGIAGMTAALELAEQGY-EVYLVEKEPELGGRA 179
PLN02612 PLN02612
phytoene desaturase
15-68 3.65e-06

phytoene desaturase


Pssm-ID: 215330 [Multi-domain]  Cd Length: 567  Bit Score: 49.46  E-value: 3.65e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2077092491  15 LSSGLRRKRQP----RIVVIGAGLAGLSAAKALLESGFTDVtILEATDRIGGRVQSVK 68
Cdd:PLN02612   80 LSASFRSAPRPakplKVVIAGAGLAGLSTAKYLADAGHKPI-LLEARDVLGGKVAAWK 136
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
26-62 6.54e-06

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 48.36  E-value: 6.54e-06
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEAtDRIGG 62
Cdd:COG0665     4 DVVVIGGGIAGLSTAYHLARRGL-DVTVLER-GRPGS 38
Ppro0129 COG2907
Predicted flavin-containing amine oxidase [General function prediction only];
23-62 1.06e-05

Predicted flavin-containing amine oxidase [General function prediction only];


Pssm-ID: 442151 [Multi-domain]  Cd Length: 423  Bit Score: 47.80  E-value: 1.06e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2077092491  23 RQPRIVVIGAGLAGLSAAKALleSGFTDVTILEATDRIGG 62
Cdd:COG2907     2 ARMRIAVIGSGISGLTAAWLL--SRRHDVTLFEANDRLGG 39
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
26-62 1.11e-05

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 47.39  E-value: 1.11e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGL-SVTLLERGDDPGS 36
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
11-62 1.42e-05

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 47.44  E-value: 1.42e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2077092491  11 TDDPLSSGLRRKRQP------RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:COG0493   102 ADKAFEEGWVKPPPPaprtgkKVAVVGSGPAGLAAAYQLARAGH-EVTVFEALDKPGG 158
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
26-62 2.44e-05

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 46.71  E-value: 2.44e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK11749  142 KVAVIGAGPAGLTAAHRLARKGY-DVTIFEARDKAGG 177
proto_IX_ox TIGR00562
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ...
27-84 3.72e-05

protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 213540 [Multi-domain]  Cd Length: 462  Bit Score: 46.37  E-value: 3.72e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2077092491  27 IVVIGAGLAGLSAAKAL---LESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWIHGS 84
Cdd:TIGR00562   5 VVIIGGGISGLCAAYYLekeIPELPVELTLVEASDRVGGKIQTVKEDGYLIERGPDSFLER 65
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
27-62 4.96e-05

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 45.98  E-value: 4.96e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2077092491  27 IVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:COG1053     6 VVVVGSGGAGLRAALEAAEAGL-KVLVLEKVPPRGG 40
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
27-85 8.09e-05

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 44.97  E-value: 8.09e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2077092491  27 IVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGgrvqsvklGHATFELGATWIHGSH 85
Cdd:pfam00890   2 VLVIGGGLAGLAAALAAAEAGL-KVAVVEKGQPFG--------GATAWSSGGIDALGNP 51
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
24-56 1.13e-04

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 44.75  E-value: 1.13e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2077092491  24 QPRIVVIGAGLAGLSAAKALLESGFT-DVTILEA 56
Cdd:COG1251     1 KMRIVIIGAGMAGVRAAEELRKLDPDgEITVIGA 34
PLN02487 PLN02487
zeta-carotene desaturase
26-68 2.12e-04

zeta-carotene desaturase


Pssm-ID: 215268 [Multi-domain]  Cd Length: 569  Bit Score: 44.02  E-value: 2.12e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVK 68
Cdd:PLN02487   77 KVAIIGAGLAGMSTAVELLDQGH-EVDIYESRPFIGGKVGSFV 118
gltD PRK12810
glutamate synthase subunit beta; Reviewed
26-62 2.20e-04

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 43.61  E-value: 2.20e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK12810  145 KVAVVGSGPAGLAAADQLARAGH-KVTVFERADRIGG 180
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
26-61 2.57e-04

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 43.68  E-value: 2.57e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIG 61
Cdd:PRK01747  262 DAAIIGGGIAGAALALALARRGW-QVTLYEADEAPA 296
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
26-62 2.59e-04

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 43.95  E-value: 2.59e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK12814  195 KVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGG 230
PRK07236 PRK07236
hypothetical protein; Provisional
20-55 3.88e-04

hypothetical protein; Provisional


Pssm-ID: 235980 [Multi-domain]  Cd Length: 386  Bit Score: 42.99  E-value: 3.88e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2077092491  20 RRKRQPRIVVIGAGLAGLSAAKALLESGFtDVTILE 55
Cdd:PRK07236    2 THMSGPRAVVIGGSLGGLFAALLLRRAGW-DVDVFE 36
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
24-62 7.73e-04

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 42.09  E-value: 7.73e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2077092491  24 QPRIVVIGAGLAGLSAAKALLESGFTdVTIL--EATDRIGG 62
Cdd:COG3573     5 DADVIVVGAGLAGLVAAAELADAGRR-VLLLdqEPEANLGG 44
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
25-56 1.13e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 41.15  E-value: 1.13e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 2077092491  25 PRIVVIGAGLAGLSAAKALLESGFtDVTILEA 56
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGG-KVTLIED 31
PRK12843 PRK12843
FAD-dependent oxidoreductase;
27-85 1.61e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 41.26  E-value: 1.61e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2077092491  27 IVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRvqsvklghATFELGATWIHGSH 85
Cdd:PRK12843   19 VIVIGAGAAGMSAALFAAIAGLK-VLLVERTEYVGGT--------TATSAGTTWIPGTR 68
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
26-64 1.82e-03

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 40.56  E-value: 1.82e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRV 64
Cdd:COG0446   126 RAVVIGGGPIGLELAEALRKRGL-KVTLVERAPRLLGVL 163
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
11-60 2.30e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 39.99  E-value: 2.30e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 2077092491  11 TDDPLSSGLRRKRqprIVVIGAGLAGLSAAKALLESGfTDVTILEATDRI 60
Cdd:pfam07992 142 SAEALRLKLLPKR---VVVVGGGYIGVELAAALAKLG-KEVTLIEALDRL 187
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
26-62 3.07e-03

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 40.50  E-value: 3.07e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK12778  433 KVAVIGSGPAGLSFAGDLAKRGY-DVTVFEALHEIGG 468
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
26-60 3.35e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 36.41  E-value: 3.35e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGfTDVTILEATDRI 60
Cdd:pfam00070   1 RVVVVGGGYIGLELAGALARLG-SKVTVVERRDRL 34
PRK12409 PRK12409
D-amino acid dehydrogenase small subunit; Provisional
25-55 3.62e-03

D-amino acid dehydrogenase small subunit; Provisional


Pssm-ID: 237093 [Multi-domain]  Cd Length: 410  Bit Score: 40.01  E-value: 3.62e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 2077092491  25 PRIVVIGAGLAGLSAAKALLESGFtDVTILE 55
Cdd:PRK12409    2 SHIAVIGAGITGVTTAYALAQRGY-QVTVFD 31
PRK09564 PRK09564
coenzyme A disulfide reductase; Reviewed
19-64 3.63e-03

coenzyme A disulfide reductase; Reviewed


Pssm-ID: 181958 [Multi-domain]  Cd Length: 444  Bit Score: 40.02  E-value: 3.63e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2077092491  19 LRRKRQPRIVVIGAGLAGLSAAKALLESGfTDVTILEATDRIGGRV 64
Cdd:PRK09564  144 LKDEEIKNIVIIGAGFIGLEAVEAAKHLG-KNVRIIQLEDRILPDS 188
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
25-59 3.68e-03

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 39.73  E-value: 3.68e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 2077092491  25 PRIVVIGAGLAGLSAAKAL---LESGFtDVTILEATDR 59
Cdd:COG1252     2 KRIVIVGGGFAGLEAARRLrkkLGGDA-EVTLIDPNPY 38
AroE COG0169
Shikimate 5-dehydrogenase [Amino acid transport and metabolism]; Shikimate 5-dehydrogenase is ...
8-54 3.70e-03

Shikimate 5-dehydrogenase [Amino acid transport and metabolism]; Shikimate 5-dehydrogenase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 439939 [Multi-domain]  Cd Length: 270  Bit Score: 39.35  E-value: 3.70e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2077092491   8 GDSTD-----DPLSSGLRRKRQPRIVVIGAGLAGLSAAKALLESGFTDVTIL 54
Cdd:COG0169   100 GDNTDgigfvRALREAGVDLAGKRVLVLGAGGAARAVAAALAEAGAAEITIV 151
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
26-54 6.11e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 39.32  E-value: 6.11e-03
                          10        20
                  ....*....|....*....|....*....
gi 2077092491  26 RIVVIGAGLAGLSAAKALLESGftDVTIL 54
Cdd:COG0029     6 DVLVIGSGIAGLSAALKLAERG--RVTLL 32
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
28-61 7.09e-03

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 38.88  E-value: 7.09e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2077092491  28 VVIGAGLAGLSAAKALLESGFtDVTILEATDRIG 61
Cdd:COG2081     1 IVIGAGAAGLMAAITAAERGA-RVLLLEKNPKVG 33
PRK09126 PRK09126
FAD-dependent hydroxylase;
27-55 8.11e-03

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 38.77  E-value: 8.11e-03
                          10        20
                  ....*....|....*....|....*....
gi 2077092491  27 IVVIGAGLAGLSAAKALLESGFTdVTILE 55
Cdd:PRK09126    6 IVVVGAGPAGLSFARSLAGSGLK-VTLIE 33
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH