|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02568 |
PLN02568 |
polyamine oxidase |
23-527 |
2.66e-99 |
|
polyamine oxidase
Pssm-ID: 215308 [Multi-domain] Cd Length: 539 Bit Score: 310.61 E-value: 2.66e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 23 RQPRIVVIGAGLAGLSAAKALLESGFT----DVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAEDNGL 98
Cdd:PLN02568 4 KKPRIVIIGAGMAGLTAANKLYTSSAAndmfELTVVEGGDRIGGRINTSEFGGERIEMGATWIHGIGGSPVYKIAQEAGS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 99 LEETTDGERSVG---RISLYSKNGVAYHLTnngqripkdVVEEFSDLYNEVYNLTQ---------EFFQRGKPVNAESQ- 165
Cdd:PLN02568 84 LESDEPWECMDGfpdRPKTVAEGGFEVDPS---------IVESISTLFRGLMDDAQgkliepsevDEVDFVKLAAKAARv 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 166 ------NSVGVFTR-------DVVRKRVKADPDDTEAVKRLKLAMIQQYLKVESCESSSHSMDEVSLSEFGEWTEIPGAH 232
Cdd:PLN02568 155 cesgggGSVGSFLRrgldaywDSVSADEQIKGYGGWSRKLLEEAIFTMHENTQRTYTSADDLSTLDLAAESEYRMFPGEE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 233 HIIPCGFIKIVEILARSIPESVIQLRKPVKCIHWnqsvskeiervadhnSDLPeedkgsnVFVECEDCEFIPADHVIVTV 312
Cdd:PLN02568 235 ITIAKGYLSVIEALASVLPPGTIQLGRKVTRIEW---------------QDEP-------VKLHFADGSTMTADHVIVTV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 313 SLGVLKK---RHESLFHPRLPEEKVMAIEKLGINTTDKIFLEFE-----EPFWSSECNSIQFVWeDEAESESLTYPEELW 384
Cdd:PLN02568 293 SLGVLKAgigEDSGLFSPPLPDFKTDAISRLGFGVVNKLFVELSprpdgSPEDVAKFPFLQMAF-HRSDSEARHDKIPWW 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 385 YKKICSfdvLYPPERYGHVLSGWICGEEALIMEKCDDETVAETCTEMLRKFTGNPNIP---------------------K 443
Cdd:PLN02568 372 MRRTAS---ICPIHKNSSVLLSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKRRVAGlgsqshplcnggassndgsrwK 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 444 PRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPY---AESSKTTPMQVMFSGEATHRKYYSTTHGAVLSGQREA 520
Cdd:PLN02568 449 FVKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDRMAEPLPRisdHDQAGGPPLQLLFAGEATHRTHYSTTHGAYFSGLREA 528
|
....*..
gi 2077092491 521 AHLIEMY 527
Cdd:PLN02568 529 NRLLQHY 535
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
34-524 |
4.51e-75 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 244.32 E-value: 4.51e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 34 LAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHgNPVYHLAEDNGLLEETTDGERSVGRIS 113
Cdd:pfam01593 1 LAGLAAARELLRAGH-DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQ-PPLLALLKELGLEDRLVLPDPAPFYTV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 114 LYsKNGVAYHLTnnGQRIPKDVVE-----EFSDLYNEVYNLTQEFFQRGKPVNAESQNSvgvfTRDVVRKRVKADPDDTE 188
Cdd:pfam01593 79 LF-AGGRRYPGD--FRRVPAGWEGllefgRLLSIPEKLRLGLAALASDALDEFDLDDFS----LAESLLFLGRRGPGDVE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 189 AVKRL----KLAMIQQYLKVESCESSSHSMdevSLSEFGEW-TEIPGAHHIIPCGFIK-IVEILARSIPESVIQLRKPVK 262
Cdd:pfam01593 152 VWDRLidpeLFAALPFASGAFAGDPSELSA---GLALPLLWaLLGEGGSLLLPRGGLGaLPDALAAQLLGGDVRLNTRVR 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 263 CIHWnqsvskeiervadhnsdlpEEDKGSnvfVECEDCEFIPADHVIVTVSLGVLKKRhesLFHPRLPEEKVMAIEKLGI 342
Cdd:pfam01593 229 SIDR-------------------EGDGVT---VTLTDGEVIEADAVIVTVPLGVLKRI---LFTPPLPPEKARAIRNLGY 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 343 NTTDKIFLEFEEPFWSSECNSIQFVWedeaesesltYPEELWYKKICSFDVLYPPERYGHVLSGWI-CGEEALIMEKCDD 421
Cdd:pfam01593 284 GPVNKVHLEFDRKFWPDLGLLGLLSE----------LLTGLGTAFSWLTFPNRAPPGKGLLLLVYVgPGDRARELEGLSD 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 422 ETVAETCTEMLRKFTGnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPL-PYaesskttpmqVMFSGEA 500
Cdd:pfam01593 354 EELLQAVLRDLRKLFG-EEAPEPLRVLVSDWHTDPWPRGSYSLPQYGPGHDDYRPLARTPdPG----------LFFAGEH 422
|
490 500
....*....|....*....|....
gi 2077092491 501 THRKYYSTTHGAVLSGQREAAHLI 524
Cdd:pfam01593 423 TSTGYPGTVEGAIESGRRAARAVL 446
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
20-525 |
1.15e-67 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 224.80 E-value: 1.15e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 20 RRKRQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLG--HATFELGATWIHGSHGNpVYHLAEDNG 97
Cdd:COG1231 3 RRARGKDVVIVGAGLAGLAAARELRKAGL-DVTVLEARDRVGGRVWTLRFGddGLYAELGAMRIPPSHTN-LLALARELG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 98 LleETTDGERSVGRiSLYSKNGVAYHltnngQRIPKDVVEEFSDLYNE-VYNLTQEFFQRGKPVNAESQNSVgvftRDVV 176
Cdd:COG1231 81 L--PLEPFPNENGN-ALLYLGGKRVR-----AGEIAADLRGVAELLAKlLRALAAALDPWAHPAAELDRESL----AEWL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 177 RKRvkadPDDTEAvkrlkLAMIQQYLKVESCESSshsmDEVSLSEF---GEWTEIPGAHHIIPCGFIKIVEILARSIPES 253
Cdd:COG1231 149 RRN----GASPSA-----RRLLGLLGAGEYGADP----DELSLLDLlryAASAGGGAQQFRIVGGMDQLPRALAAELGDR 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 254 vIQLRKPVKCIHWNqsvskeiervadhnsdlpeedkGSNVFVECEDCEFIPADHVIVTVSLGVLKKRHeslFHPRLPEEK 333
Cdd:COG1231 216 -IRLGAPVTRIRQD----------------------GDGVTVTTDDGGTVRADAVIVTVPPSVLRRIE---FDPPLPAAK 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFwssecnsiqfvWEDEAESESLTYPEELWYkkiCSFDVLYPPERYGHVLSGWICGEEA 413
Cdd:COG1231 270 RAAIQRLPYGAAIKVFLQFDRPF-----------WEEDGLYGGISLTDLPIR---QTWYPSNGPDGGAGVLLGYVGGDDA 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 414 LIMEKCDDETVAETCTEMLRKFTGNPnIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPyaesskttpmQ 493
Cdd:COG1231 336 RALAALSPEERVAAALEQLARIFGVY-AAEPVDYVSTDWGRDPWSRGAYAAAPPGQLTAAGPALAEPDG----------R 404
|
490 500 510
....*....|....*....|....*....|..
gi 2077092491 494 VMFSGEATHRKYYSTTHGAVLSGQREAAHLIE 525
Cdd:COG1231 405 IHFAGEHTSDEWPGWVEGALESGERAAAEILA 436
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
25-516 |
1.06e-51 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 182.19 E-value: 1.06e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 25 PRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHG-SHGNPVYHLAEDNGLLEETT 103
Cdd:PLN02268 1 PSVIVIGGGIAGIAAARALHDASF-KVTLLESRDRIGGRVHTDYSFGFPVDMGASWLHGvCNENPLAPLIGRLGLPLYRT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 104 DGERSVgrisLYSKNGVAYHL-TNNGQRIPKDVVEEFSDLYNEVYNLTqeffqrgKPVNAESQNSVGV---FTRdVVRKR 179
Cdd:PLN02268 80 SGDNSV----LYDHDLESYALfDMDGNQVPQELVTKVGETFERILEET-------EKVRDEHEEDMSLlqaISI-VLERH 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 180 vkadPDdteavkrLKLA-----MIQQYL-KVESCESSShsMDEVSLSEFGEWTEIPGAHHIIPCGFIKIVEILARSIPes 253
Cdd:PLN02268 148 ----PE-------LRLEglaheVLQWYLcRMEGWFAAD--ADTISLKSWDQEELLEGGHGLMVRGYDPVINTLAKGLD-- 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 254 viqlrkpvkcIHWNQSVSKEIERVadhnsdlpeedkgSNVFVECEDCEFIPADHVIVTVSLGVLKKRHESlFHPRLPEEK 333
Cdd:PLN02268 213 ----------IRLNHRVTKIVRRY-------------NGVKVTVEDGTTFVADAAIIAVPLGVLKANIIK-FEPELPEWK 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFWSSecnsIQFVwedeAESESLTYPeelwykkiCS-FDVLYPPEryGH-VLSGWICGE 411
Cdd:PLN02268 269 EEAISDLGVGIENKIALHFDSVFWPN----VEFL----GVVAPTSYG--------CSyFLNLHKAT--GHpVLVYMPAGR 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 412 EALIMEKCDDETVAETCTEMLRKFTgnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPyaesskttp 491
Cdd:PLN02268 331 LARDIEKLSDEAAANFAMSQLKKML--PDATEPVQYLVSRWGSDPNSLGCYSYDLVGKPHDLYERLRAPVD--------- 399
|
490 500
....*....|....*....|....*
gi 2077092491 492 mQVMFSGEATHRKYYSTTHGAVLSG 516
Cdd:PLN02268 400 -NLFFAGEATSSDFPGSVHGAYSTG 423
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
15-533 |
1.29e-51 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 183.38 E-value: 1.29e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 15 LSSGLRRKRQPRIVVIGAGLAGLSAAKALLESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHG---NPVYH 91
Cdd:PLN02676 17 AVAAMDAKPSPSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRKANFAGVSVELGANWVEGVGGpesNPIWE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 92 LAEDNGLLEETTDGERSvgRISLYSKNGVAYhltnngqriPKDVVEEFSDLYNEVYNLTQEFfqrGKPVNAESQNSVGVF 171
Cdd:PLN02676 97 LANKLKLRTFYSDFDNL--SSNIYKQDGGLY---------PKKVVQKSMKVADASDEFGENL---SISLSAKKAVDISIL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 172 TRDVVRKRVKADPddteavkrLKLAMIQQYLKVESCE-----SSSHSMDEVSLSEFGEWTEIPGAhhiiPCGFIKIVEIL 246
Cdd:PLN02676 163 TAQRLFGQVPKTP--------LEMVIDYYNYDYEFAEpprvtSLKNTEPNPTFVDFGEDEYFVAD----PRGYESLVYYL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 247 ARS--------IPESVIQLRKPVKCIhwnqSVSKeiervadhnsdlpeedkgSNVFVECEDCEFIPADHVIVTVSLGVLK 318
Cdd:PLN02676 231 AEQflstksgkITDPRLKLNKVVREI----SYSK------------------NGVTVKTEDGSVYRAKYVIVSVSLGVLQ 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 319 krhESL--FHPRLPEEKVMAIEKLGINTTDKIFLEFEEPFWSSECNSIQFVWEDEAESeslTYPeeLWYKkicsFDVLYP 396
Cdd:PLN02676 289 ---SDLikFKPPLPDWKIEAIYQFDMAVYTKIFLKFPYKFWPSGPGTEFFLYAHERRG---YYP--FWQH----LENEYP 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 397 PErygHVLSGWICGEEALIMEKCDDETVAETCTEMLRKFTGnPNIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEK 476
Cdd:PLN02676 357 GS---NVLFVTVTDEESRRIEQQPDSETKAEIMEVLRKMFG-PNIPEATDILVPRWWSNRFFKGSYSNWPIGVSRYEFDQ 432
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2077092491 477 LAKPLPyaesskttpmQVMFSGEATHRKYYSTTHGAVLSGqreaahlIEMYQDLLQC 533
Cdd:PLN02676 433 IRAPVG----------RVYFTGEHTSEKYNGYVHGAYLAG-------IDTANDLLEC 472
|
|
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
21-524 |
2.92e-41 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 158.62 E-value: 2.92e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 21 RKRQPRIVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQSVKLG----HATFELGATWIHGSHGNPVYHLAEDN 96
Cdd:PLN02328 235 GVEPANVVVVGAGLAGLVAARQLLSMGFK-VVVLEGRARPGGRVKTMKMKgdgvVAAADLGGSVLTGINGNPLGVLARQL 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 97 GL-LEETTDgersvgRISLYSKNGVAYHltnngQRIPKDVVEEFSDLYNEVYNLTQEFFQRGKPVNAESQNSVGVFtRDV 175
Cdd:PLN02328 314 GLpLHKVRD------ICPLYLPDGKAVD-----AEIDSKIEASFNKLLDRVCKLRQAMIEEVKSVDVNLGTALEAF-RHV 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 176 vrKRVKADPDDteavkrlkLAMIQQYL-KVESCESSSHSMDEVSLSEFGEWTEIPGAHHIIPCGFIKIVEILARSIPesv 254
Cdd:PLN02328 382 --YKVAEDPQE--------RMLLNWHLaNLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNDTFVRELAKDLP--- 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 255 IQLRKPVKCIHWnqsvskeiervadhnsdlpeedkGSN-VFVECEDCEFiPADHVIVTVSLGVLKKRHESlFHPRLPEEK 333
Cdd:PLN02328 449 IFYERTVESIRY-----------------------GVDgVIVYAGGQEF-HGDMVLCTVPLGVLKKGSIE-FYPELPQRK 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 334 VMAIEKLGINTTDKIFLEFEEPFWSSECNSIQFVWEDEAESESLTypeeLWYKkicsfdvlYPPERYGHVLSGWICGEEA 413
Cdd:PLN02328 504 KDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSMRGEFF----LFYS--------YSSVSGGPLLIALVAGDAA 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 414 limEKCDDETVAETCTEMLRKFTG--NPN---IPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPYAessk 488
Cdd:PLN02328 572 ---VKFETLSPVESVKRVLQILRGifHPKgivVPDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVGDG---- 644
|
490 500 510
....*....|....*....|....*....|....*.
gi 2077092491 489 ttpmQVMFSGEATHRKYYSTTHGAVLSGQREAAHLI 524
Cdd:PLN02328 645 ----RVFFAGEATNKQYPATMHGAFLSGMREAANIL 676
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
27-524 |
1.74e-36 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 144.26 E-value: 1.74e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 27 IVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQSVKLG----HATFELGATWIHGSHGNPVYHLAEDNGL-LEE 101
Cdd:PLN02529 163 VIIVGAGLAGLAAARQLLSFGFK-VVVLEGRNRPGGRVYTQKMGrkgqFAAVDLGGSVITGIHANPLGVLARQLSIpLHK 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 102 TTDgersvgRISLYSKNGVAYHltnngQRIPKDVVEEFSDLYNEVYNLTQEFFQRGKPVnaesqnSVG-VFTRdvvRKRV 180
Cdd:PLN02529 242 VRD------NCPLYKPDGALVD-----KEIDSNIEFIFNKLLDKVTELRQIMGGFANDI------SLGsVLER---LRQL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 181 KADPDDTEAVKRLKLAMIQQYLKVESCES--SSHSMDEVSLSEFGewteipGAHHIIPCGFIKIVEILARSIPesvIQLR 258
Cdd:PLN02529 302 YGVARSTEERQLLDWHLANLEYANAGCLSdlSAAYWDQDDPYEMG------GDHCFLAGGNWRLINALCEGVP---IFYG 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 259 KPVKCIHWNQSvskEIERVAdhnsdlpeedkGSNVFvecedcefiPADHVIVTVSLGVLKKRHESlFHPRLPEEKVMAIE 338
Cdd:PLN02529 373 KTVDTIKYGND---GVEVIA-----------GSQVF---------QADMVLCTVPLGVLKKRTIR-FEPELPRRKLAAID 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 339 KLGINTTDKIFLEFEEPFWSSECNSIQFVwedeaeSESLTYPEE--LWYKkicsfdvlYPPERYGHVLSGWICGEEALIM 416
Cdd:PLN02529 429 RLGFGLLNKVAMVFPSVFWGEELDTFGCL------NESSNKRGEffLFYG--------YHTVSGGPALVALVAGEAAQRF 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 417 EKCDDETVAETCTEMLRKFTGNP--NIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAkplpyaessKTTPMQV 494
Cdd:PLN02529 495 ENTDPSTLLHRVLSVLRGIYNPKgiNVPDPIQTICTRWGSDPLSYGSYSHVRVQSSGSDYDILA---------ESVSGRL 565
|
490 500 510
....*....|....*....|....*....|
gi 2077092491 495 MFSGEATHRKYYSTTHGAVLSGQREAAHLI 524
Cdd:PLN02529 566 FFAGEATTRQYPATMHGAFLSGLREASRIL 595
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
27-523 |
6.30e-36 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 142.85 E-value: 6.30e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 27 IVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQSVKLGH----ATFELGATWIHGSHGNPVYHLAEDNGL-LEE 101
Cdd:PLN03000 187 VVIVGAGLSGLAAARQLMRFGFK-VTVLEGRKRPGGRVYTKKMEAnrvgAAADLGGSVLTGTLGNPLGIIARQLGSsLYK 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 102 TTDgersvgRISLYSKNGvayhltnngQRIPKDVVEEFSDLYNEVYNLTQEFFQRGKPVNAESQNSVGVFTRdvvrKRVK 181
Cdd:PLN03000 266 VRD------KCPLYRVDG---------KPVDPDVDLKVEVAFNQLLDKASKLRQLMGDVSMDVSLGAALETF----RQVS 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 182 ADPDDTEavkrlKLAMIQQYL-KVESCESSSHSMDEVSLSEFGEWTEIPGAHHIIPCGFIKIVEILARSIPesvIQLRKP 260
Cdd:PLN03000 327 GNDVATE-----EMGLFNWHLaNLEYANAGLVSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALAENVP---ILYEKT 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 261 VKCIHWNQSVSKEIervadhnsdlpeedKGSNVFvecedcefiPADHVIVTVSLGVLKKRHESlFHPRLPEEKVMAIEKL 340
Cdd:PLN03000 399 VQTIRYGSNGVKVI--------------AGNQVY---------EGDMVLCTVPLGVLKNGSIK-FVPELPQRKLDCIKRL 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 341 GINTTDKIFLEFEEPFWSSECNSIQFVWEDEaeseslTYPEE--LWYKkicsfdvlYPPERYGHVLSGWICGEEALIMEK 418
Cdd:PLN03000 455 GFGLLNKVAMLFPYVFWSTDLDTFGHLTEDP------NYRGEffLFYS--------YAPVAGGPLLIALVAGEAAHKFET 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 419 CDDETVAETCTEMLRKFTgNP---NIPKPRRILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLPYAesskttpmQVM 495
Cdd:PLN03000 521 MPPTDAVTRVLHILRGIY-EPqgiNVPDPLQTVCTRWGGDPFSLGSYSNVAVGASGDDYDILAESVGDG--------RLF 591
|
490 500
....*....|....*....|....*...
gi 2077092491 496 FSGEATHRKYYSTTHGAVLSGQREAAHL 523
Cdd:PLN03000 592 FAGEATTRRYPATMHGAFVTGLREAANM 619
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
26-526 |
2.28e-33 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 135.77 E-value: 2.28e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRVQ------SVKLghatfELGATWIHGshgnpvyhlaednglL 99
Cdd:PLN02976 695 KIIVVGAGPAGLTAARHLQRQGFS-VTVLEARSRIGGRVYtdrsslSVPV-----DLGASIITG---------------V 753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 100 EETTDGERSVGRISLY-SKNGVAYHLTNN---------GQRIPKDVVEEFSDLYNEVYN-LTQEFFQRGKPVNAESQN-- 166
Cdd:PLN02976 754 EADVATERRPDPSSLIcAQLGLELTVLNSdcplydvvtGEKVPADLDEALEAEYNSLLDdMVLLVAQKGEHAMKMSLEdg 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 167 -SVGVFTRDVVRKRVKADPDDTEAVKRLKLAMIQQYLKVESCESSSHS----------MD---------------EVSLS 220
Cdd:PLN02976 834 lEYALKRRRMPRPGVDIDETELGNAADDLYDSASTGVDGGHCEKESKEdvlsplerrvMNwhfahleygcaallkEVSLP 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 221 E---------FGewteipGAHHIIPCGFIKIVEILARSIPesviqlrkpvkcIHWNQSVSKEIERVADHNSDlpeEDKGS 291
Cdd:PLN02976 914 YwnqddvyggFG------GAHCMIKGGYSNVVESLAEGLD------------IHLNHVVTDVSYGSKDAGAS---GSSRK 972
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 292 NVFVECED-CEFIpADHVIVTVSLGVLKKrhESL-FHPRLPEEKVMAIEKLGINTTDKIFLEFEEPFWSsecNSIQFVWE 369
Cdd:PLN02976 973 KVKVSTSNgSEFL-GDAVLITVPLGCLKA--ETIkFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWD---DSVDYFGA 1046
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 370 DEAESESLTYPEELW-YKKIcsfdVLYPperyghVLSGWICGEEAL---IMEKCDDETVAETcteMLRKFTGNPNIPKPR 445
Cdd:PLN02976 1047 TAEETDLRGQCFMFWnVKKT----VGAP------VLIALVVGKAAIdgqSMSSSDHVNHALM---VLRKLFGEALVPDPV 1113
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 446 RILRSSWGSNPNFRGSYSYTQVGSSGADVEKLAKPLpyaESSkttpmqVMFSGEATHRKYYSTTHGAVLSGQREAAHLIE 525
Cdd:PLN02976 1114 ASVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPV---ENC------LFFAGEATCKEHPDTVGGAMMSGLREAVRIID 1184
|
.
gi 2077092491 526 M 526
Cdd:PLN02976 1185 I 1185
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
29-95 |
6.99e-16 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 72.18 E-value: 6.99e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2077092491 29 VIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAED 95
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGF-RVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFHGSDEPNVRDLLDE 66
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
24-331 |
1.65e-14 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 75.64 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 24 QPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWIHgSHGNPVYHLAEDNGLLEETt 103
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGH-EVTVLEASDRVGGLIRTVEVDGFRIDRGPHSFL-TRDPEVLELLRELGLGDEL- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 104 dgERSVGRISLYSKNGVAYhltnngqRIPKDVveeFSDLYN------EVYNLTQEFFQRGKPVNAESqnSVG-----VFT 172
Cdd:COG1232 78 --VWPNTRKSYIYYGGKLH-------PLPQGP---LALLRSpllslaGKLRALLELLAPRRPPGEDE--SLAefvrrRFG 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 173 RDVVRKRVK--------ADPDD---TEAVKRLKLAMIQQYLKVESCESSshSMDEVSLSEFGEWTEipgahhiipcGFIK 241
Cdd:COG1232 144 REVYERLVEpllegvyaGDPDElsaDWAFPRLKRLELEHGSLIKGALAL--RKGAKAGEVFGYLRG----------GLGT 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 242 IVEILARSIPESVIQLRKPVkcihwnqsvsKEIERVADHNSdlpeedkgsnvfVECEDCEFIPADHVIVTVSLGVLKKrh 321
Cdd:COG1232 212 LVEALAEALEAGEIRLGTRV----------TAIEREGGGWR------------VTTSDGETIEADAVVSATPAPALAR-- 267
|
330
....*....|
gi 2077092491 322 esLFHPRLPE 331
Cdd:COG1232 268 --LLAPLPPE 275
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
23-98 |
3.21e-13 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 71.81 E-value: 3.21e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2077092491 23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSvklghatfelgatWIHGSHGNPVyhlaeDNGL 98
Cdd:COG3349 2 MPPRVVVVGGGLAGLAAAVELAEAGF-RVTLLEARPRLGGRARS-------------FPDPDTGLPI-----DNGQ 58
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
22-81 |
2.09e-12 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 69.11 E-value: 2.09e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 22 KRQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGATWI 81
Cdd:COG1233 1 MMMYDVVVIGAGIGGLAAAALLARAGY-RVTVLEKNDTPGGRARTFERPGFRFDVGPSVL 59
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
23-78 |
1.94e-11 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 65.28 E-value: 1.94e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2077092491 23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFELGA 78
Cdd:COG3380 2 SMPDIAIIGAGIAGLAAARALQDAGH-EVTVFEKSRGVGGRMATRRLDGGRFDHGA 56
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
25-78 |
1.67e-10 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 63.33 E-value: 1.67e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2077092491 25 PRIVVIGAGLAGLSAAKALLESGFT-DVTILEATDRIGGRVQSVKLGHATFELGA 78
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDaDITLLEASDRLGGKIQTVRKDGFPIELGP 55
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
27-81 |
2.82e-09 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 59.60 E-value: 2.82e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2077092491 27 IVVIGAGLAGLSAAkALLESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWI 81
Cdd:TIGR02734 1 AVVIGAGFGGLALA-IRLAAAGIPVTVVEQRDKPGGRAGVLEDDGFRFDTGPTVI 54
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
23-62 |
3.79e-09 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 58.72 E-value: 3.79e-09
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2077092491 23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:COG2072 5 EHVDVVVIGAGQAGLAAAYHLRRAGI-DFVVLEKADDVGG 43
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
26-81 |
7.22e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 57.97 E-value: 7.22e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVqsvklghATFELGATWI 81
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGH-EVTVFEADDQLGGLA-------ASFEFGGLPI 48
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
26-136 |
2.71e-07 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 52.84 E-value: 2.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVqsvkLGhatfELGATWIHGSHgnpvyhlaEDNG---LLEET 102
Cdd:COG1251 144 RVVVIGGGLIGLEAAAALRKRGL-EVTVVERAPRLLPRQ----LD----EEAGALLQRLL--------EALGvevRLGTG 206
|
90 100 110
....*....|....*....|....*....|....*..
gi 2077092491 103 TD---GERSVGRISLyskngvayhltNNGQRIPKDVV 136
Cdd:COG1251 207 VTeieGDDRVTGVRL-----------ADGEELPADLV 232
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
25-62 |
2.94e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 52.97 E-value: 2.94e-07
10 20 30
....*....|....*....|....*....|....*...
gi 2077092491 25 PRIVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGG 62
Cdd:PRK07208 5 KSVVIIGAGPAGLTAAYELLKRGYP-VTVLEADPVVGG 41
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
26-101 |
5.61e-07 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 51.94 E-value: 5.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFTDVTILEATDRIGGRVQSVKlghatfELGATWIHGSH----GNPVYHLAEDNGLLEE 101
Cdd:PLN02576 14 DVAVVGAGVSGLAAAYALASKHGVNVLVTEARDRVGGNITSVS------EDGFIWEEGPNsfqpSDPELTSAVDSGLRDD 87
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
23-76 |
1.85e-06 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 49.94 E-value: 1.85e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2077092491 23 RQPRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVKLGHATFEL 76
Cdd:COG0654 2 MRTDVLIVGGGPAGLALALALARAGI-RVTVVERAPPPRPDGRGIALSPRSLEL 54
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
25-64 |
2.91e-06 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 49.86 E-value: 2.91e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2077092491 25 PRIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRV 64
Cdd:COG1148 141 KRALVIGGGIAGMTAALELAEQGY-EVYLVEKEPELGGRA 179
|
|
| PLN02612 |
PLN02612 |
phytoene desaturase |
15-68 |
3.65e-06 |
|
phytoene desaturase
Pssm-ID: 215330 [Multi-domain] Cd Length: 567 Bit Score: 49.46 E-value: 3.65e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2077092491 15 LSSGLRRKRQP----RIVVIGAGLAGLSAAKALLESGFTDVtILEATDRIGGRVQSVK 68
Cdd:PLN02612 80 LSASFRSAPRPakplKVVIAGAGLAGLSTAKYLADAGHKPI-LLEARDVLGGKVAAWK 136
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
26-62 |
6.54e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 48.36 E-value: 6.54e-06
10 20 30
....*....|....*....|....*....|....*..
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEAtDRIGG 62
Cdd:COG0665 4 DVVVIGGGIAGLSTAYHLARRGL-DVTVLER-GRPGS 38
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
23-62 |
1.06e-05 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 47.80 E-value: 1.06e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2077092491 23 RQPRIVVIGAGLAGLSAAKALleSGFTDVTILEATDRIGG 62
Cdd:COG2907 2 ARMRIAVIGSGISGLTAAWLL--SRRHDVTLFEANDRLGG 39
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
26-62 |
1.11e-05 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 47.39 E-value: 1.11e-05
10 20 30
....*....|....*....|....*....|....*..
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGL-SVTLLERGDDPGS 36
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
11-62 |
1.42e-05 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 47.44 E-value: 1.42e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2077092491 11 TDDPLSSGLRRKRQP------RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:COG0493 102 ADKAFEEGWVKPPPPaprtgkKVAVVGSGPAGLAAAYQLARAGH-EVTVFEALDKPGG 158
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
26-62 |
2.44e-05 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 46.71 E-value: 2.44e-05
10 20 30
....*....|....*....|....*....|....*..
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK11749 142 KVAVIGAGPAGLTAAHRLARKGY-DVTIFEARDKAGG 177
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
27-84 |
3.72e-05 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 46.37 E-value: 3.72e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2077092491 27 IVVIGAGLAGLSAAKAL---LESGFTDVTILEATDRIGGRVQSVKLGHATFELGATWIHGS 84
Cdd:TIGR00562 5 VVIIGGGISGLCAAYYLekeIPELPVELTLVEASDRVGGKIQTVKEDGYLIERGPDSFLER 65
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
27-62 |
4.96e-05 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 45.98 E-value: 4.96e-05
10 20 30
....*....|....*....|....*....|....*.
gi 2077092491 27 IVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGL-KVLVLEKVPPRGG 40
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
27-85 |
8.09e-05 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 44.97 E-value: 8.09e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2077092491 27 IVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGgrvqsvklGHATFELGATWIHGSH 85
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGL-KVAVVEKGQPFG--------GATAWSSGGIDALGNP 51
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
24-56 |
1.13e-04 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 44.75 E-value: 1.13e-04
10 20 30
....*....|....*....|....*....|....
gi 2077092491 24 QPRIVVIGAGLAGLSAAKALLESGFT-DVTILEA 56
Cdd:COG1251 1 KMRIVIIGAGMAGVRAAEELRKLDPDgEITVIGA 34
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
26-68 |
2.12e-04 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 44.02 E-value: 2.12e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRVQSVK 68
Cdd:PLN02487 77 KVAIIGAGLAGMSTAVELLDQGH-EVDIYESRPFIGGKVGSFV 118
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
26-62 |
2.20e-04 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 43.61 E-value: 2.20e-04
10 20 30
....*....|....*....|....*....|....*..
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK12810 145 KVAVVGSGPAGLAAADQLARAGH-KVTVFERADRIGG 180
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
26-61 |
2.57e-04 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 43.68 E-value: 2.57e-04
10 20 30
....*....|....*....|....*....|....*.
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIG 61
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGW-QVTLYEADEAPA 296
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
26-62 |
2.59e-04 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 43.95 E-value: 2.59e-04
10 20 30
....*....|....*....|....*....|....*..
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK12814 195 KVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGG 230
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
20-55 |
3.88e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 42.99 E-value: 3.88e-04
10 20 30
....*....|....*....|....*....|....*.
gi 2077092491 20 RRKRQPRIVVIGAGLAGLSAAKALLESGFtDVTILE 55
Cdd:PRK07236 2 THMSGPRAVVIGGSLGGLFAALLLRRAGW-DVDVFE 36
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
24-62 |
7.73e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.09 E-value: 7.73e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2077092491 24 QPRIVVIGAGLAGLSAAKALLESGFTdVTIL--EATDRIGG 62
Cdd:COG3573 5 DADVIVVGAGLAGLVAAAELADAGRR-VLLLdqEPEANLGG 44
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
25-56 |
1.13e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 41.15 E-value: 1.13e-03
10 20 30
....*....|....*....|....*....|..
gi 2077092491 25 PRIVVIGAGLAGLSAAKALLESGFtDVTILEA 56
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGG-KVTLIED 31
|
|
| PRK12843 |
PRK12843 |
FAD-dependent oxidoreductase; |
27-85 |
1.61e-03 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237225 [Multi-domain] Cd Length: 578 Bit Score: 41.26 E-value: 1.61e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2077092491 27 IVVIGAGLAGLSAAKALLESGFTdVTILEATDRIGGRvqsvklghATFELGATWIHGSH 85
Cdd:PRK12843 19 VIVIGAGAAGMSAALFAAIAGLK-VLLVERTEYVGGT--------TATSAGTTWIPGTR 68
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
26-64 |
1.82e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 40.56 E-value: 1.82e-03
10 20 30
....*....|....*....|....*....|....*....
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGGRV 64
Cdd:COG0446 126 RAVVIGGGPIGLELAEALRKRGL-KVTLVERAPRLLGVL 163
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
11-60 |
2.30e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 39.99 E-value: 2.30e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2077092491 11 TDDPLSSGLRRKRqprIVVIGAGLAGLSAAKALLESGfTDVTILEATDRI 60
Cdd:pfam07992 142 SAEALRLKLLPKR---VVVVGGGYIGVELAAALAKLG-KEVTLIEALDRL 187
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
26-62 |
3.07e-03 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 40.50 E-value: 3.07e-03
10 20 30
....*....|....*....|....*....|....*..
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGFtDVTILEATDRIGG 62
Cdd:PRK12778 433 KVAVIGSGPAGLSFAGDLAKRGY-DVTVFEALHEIGG 468
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
26-60 |
3.35e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 36.41 E-value: 3.35e-03
10 20 30
....*....|....*....|....*....|....*
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGfTDVTILEATDRI 60
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLG-SKVTVVERRDRL 34
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
25-55 |
3.62e-03 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 40.01 E-value: 3.62e-03
10 20 30
....*....|....*....|....*....|.
gi 2077092491 25 PRIVVIGAGLAGLSAAKALLESGFtDVTILE 55
Cdd:PRK12409 2 SHIAVIGAGITGVTTAYALAQRGY-QVTVFD 31
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
19-64 |
3.63e-03 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 40.02 E-value: 3.63e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2077092491 19 LRRKRQPRIVVIGAGLAGLSAAKALLESGfTDVTILEATDRIGGRV 64
Cdd:PRK09564 144 LKDEEIKNIVIIGAGFIGLEAVEAAKHLG-KNVRIIQLEDRILPDS 188
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
25-59 |
3.68e-03 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 39.73 E-value: 3.68e-03
10 20 30
....*....|....*....|....*....|....*...
gi 2077092491 25 PRIVVIGAGLAGLSAAKAL---LESGFtDVTILEATDR 59
Cdd:COG1252 2 KRIVIVGGGFAGLEAARRLrkkLGGDA-EVTLIDPNPY 38
|
|
| AroE |
COG0169 |
Shikimate 5-dehydrogenase [Amino acid transport and metabolism]; Shikimate 5-dehydrogenase is ... |
8-54 |
3.70e-03 |
|
Shikimate 5-dehydrogenase [Amino acid transport and metabolism]; Shikimate 5-dehydrogenase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis
Pssm-ID: 439939 [Multi-domain] Cd Length: 270 Bit Score: 39.35 E-value: 3.70e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 2077092491 8 GDSTD-----DPLSSGLRRKRQPRIVVIGAGLAGLSAAKALLESGFTDVTIL 54
Cdd:COG0169 100 GDNTDgigfvRALREAGVDLAGKRVLVLGAGGAARAVAAALAEAGAAEITIV 151
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
26-54 |
6.11e-03 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 39.32 E-value: 6.11e-03
10 20
....*....|....*....|....*....
gi 2077092491 26 RIVVIGAGLAGLSAAKALLESGftDVTIL 54
Cdd:COG0029 6 DVLVIGSGIAGLSAALKLAERG--RVTLL 32
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
28-61 |
7.09e-03 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 38.88 E-value: 7.09e-03
10 20 30
....*....|....*....|....*....|....
gi 2077092491 28 VVIGAGLAGLSAAKALLESGFtDVTILEATDRIG 61
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGA-RVLLLEKNPKVG 33
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
27-55 |
8.11e-03 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 38.77 E-value: 8.11e-03
10 20
....*....|....*....|....*....
gi 2077092491 27 IVVIGAGLAGLSAAKALLESGFTdVTILE 55
Cdd:PRK09126 6 IVVVGAGPAGLSFARSLAGSGLK-VTLIE 33
|
|
|