|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4220 |
pfam13968 |
Domain of unknown function (DUF4220); This family is found in plants and is often associated ... |
52-368 |
2.77e-61 |
|
Domain of unknown function (DUF4220); This family is found in plants and is often associated with DUF294, pfam04578.
:
Pssm-ID: 464058 Cd Length: 316 Bit Score: 212.99 E-value: 2.77e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 52 LAYVGADMVAVYALGLISrnvqsantsdgSGRSSNRLAFFWVPFLLIHLGGQDTMTAFSIEDNNLWLRHLLNLSIQVYLA 131
Cdd:pfam13968 1 LAYLLADPLATYTLGLMQ-----------SSPFKNELFAVWAPFLLLHLGGPDTITAYSLEDNELWLRHLLGLLLQVILV 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 132 LYAFWKSTGRHSLQ---LLAPAILVFHAGIIRYGERTWALKCGSRdglketsWQLPKLNVEIDKGSYLDTIcyVLKSILC 208
Cdd:pfam13968 70 LYVILKGLGTRLSAptiLTAPLWLLFVLGVIKYGERTWALRLASR-------GRSSKLVADYMRYEHFDPV--TMEGYRC 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 209 VH--------DLFSGRTI---SQMKERHVFRFQG---DRPLEQVSKLLEVELAMMYDDLYTKAMVLRIRSGFILRCIShV 274
Cdd:pfam13968 141 LSfalfkllrRRFVDLLIlseAGLEKTRDFVFDGldeDLDYERAFRVIEVELSFLYDFFYTKAAVLHSWGGLSLFLTL-L 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 275 FMIAAFVLFLTACSKQQYNR-ADIAITYVLFIGGFVLDVCSIFLVAMSPWTWAFFRAQNCHRLAHISWLILCS--HIGWP 351
Cdd:pfam13968 220 LALVLFVVLSKLGSISAVDRvVDVIITYVLLAGAIFLELYQLLLYLFSDWTKVSLVCRYVRRSSRGSLRLSLLlrLLLRL 299
|
330
....*....|....*..
gi 2022376247 352 EKRPLWSNSMGQFSFLS 368
Cdd:pfam13968 300 VSKRRWSNKIGQYNLLD 316
|
|
| NB-ARC super family |
cl26397 |
NB-ARC domain; |
821-1066 |
1.67e-37 |
|
NB-ARC domain;
The actual alignment was detected with superfamily member pfam00931:
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 141.75 E-value: 1.67e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 821 IDEPTNDMIKWLTEGGDsvqkLKVVSIWGPGGLGKTTLARQVYDK---IARQFDYRAFVSVSQKPDMRKIFRNILTSLtG 897
Cdd:pfam00931 1 REDMVEKVIGKLSEKDE----PGIVGIHGMGGVGKTTLAAQIFNDfdeVEGHFDSVAWVVVSKTFTISTLQQTILQNL-G 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 898 VEHVGIEAWDEELLINKLRDFIDGKRYFIVIDDIWSTTDWQTIRCVLLDSNIGSRVLTTTQISYVAESccLSDQDKVFEM 977
Cdd:pfam00931 76 LSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGR--VGGPSDPHEV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 978 KHLSAIHAEKLFLKRIFGSGDNCPPHLKEVSDDILRRCGGLPLAIITMASLLVNKpQTEEQWEKYRDSI----VENDPIV 1053
Cdd:pfam00931 154 ELLEPDEAWELFENKVFPKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK-KTVEEWKHVYDVLqselKSNSYSL 232
|
250
....*....|...
gi 2022376247 1054 KKMQEILSLSYTD 1066
Cdd:pfam00931 233 NSVRSILQLSYEN 245
|
|
| Rx_N |
pfam18052 |
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ... |
661-753 |
3.18e-29 |
|
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.
:
Pssm-ID: 436239 Cd Length: 93 Bit Score: 112.36 E-value: 3.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 661 VVSLVLEKISTLIEKEYSKLKGVRDEILSLKDELSSMNALLLKLSDIEDLDVQVKEWRNQIRELSYDIEDCIDNFMHQVG 740
Cdd:pfam18052 1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLDEFLYEAL 80
|
90
....*....|...
gi 2022376247 741 SSSNNSDMKCFCR 753
Cdd:pfam18052 81 RRKSSPKKLKFRH 93
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1216-1345 |
1.80e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
:
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.91 E-value: 1.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1216 ISEFQSLRVINIENND--TLDNhylnGIGRLFQLKYLRLIEVSISKLPEEIGELQQLVTLELEHTKIKELPKGITRLKNL 1293
Cdd:COG4886 132 LANLTNLKELDLSNNQltDLPE----PLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNL 207
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 1294 VFLRADY---KSLPKGIGNMKALQKLSwvkVNSTAPSvTLQEMGDLTELRYLDLS 1345
Cdd:COG4886 208 EELDLSGnqlTDLPEPLANLTNLETLD---LSNNQLT-DLPELGNLTNLEELDLS 258
|
|
| DUF594 |
pfam04578 |
Protein of unknown function, DUF594; |
564-618 |
6.39e-16 |
|
Protein of unknown function, DUF594;
:
Pssm-ID: 461358 Cd Length: 55 Bit Score: 73.34 E-value: 6.39e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 564 EQEEPRAWLEtlvEIRDMWMRLLIYVAGKCQVELHAQQLGRGGELLTFVWLLMVH 618
Cdd:pfam04578 1 EKEDEEKRWE---VLADVWVEMLCYAAPSCRAEAHAKQLARGGELITHVWLLLTH 52
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4220 |
pfam13968 |
Domain of unknown function (DUF4220); This family is found in plants and is often associated ... |
52-368 |
2.77e-61 |
|
Domain of unknown function (DUF4220); This family is found in plants and is often associated with DUF294, pfam04578.
Pssm-ID: 464058 Cd Length: 316 Bit Score: 212.99 E-value: 2.77e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 52 LAYVGADMVAVYALGLISrnvqsantsdgSGRSSNRLAFFWVPFLLIHLGGQDTMTAFSIEDNNLWLRHLLNLSIQVYLA 131
Cdd:pfam13968 1 LAYLLADPLATYTLGLMQ-----------SSPFKNELFAVWAPFLLLHLGGPDTITAYSLEDNELWLRHLLGLLLQVILV 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 132 LYAFWKSTGRHSLQ---LLAPAILVFHAGIIRYGERTWALKCGSRdglketsWQLPKLNVEIDKGSYLDTIcyVLKSILC 208
Cdd:pfam13968 70 LYVILKGLGTRLSAptiLTAPLWLLFVLGVIKYGERTWALRLASR-------GRSSKLVADYMRYEHFDPV--TMEGYRC 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 209 VH--------DLFSGRTI---SQMKERHVFRFQG---DRPLEQVSKLLEVELAMMYDDLYTKAMVLRIRSGFILRCIShV 274
Cdd:pfam13968 141 LSfalfkllrRRFVDLLIlseAGLEKTRDFVFDGldeDLDYERAFRVIEVELSFLYDFFYTKAAVLHSWGGLSLFLTL-L 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 275 FMIAAFVLFLTACSKQQYNR-ADIAITYVLFIGGFVLDVCSIFLVAMSPWTWAFFRAQNCHRLAHISWLILCS--HIGWP 351
Cdd:pfam13968 220 LALVLFVVLSKLGSISAVDRvVDVIITYVLLAGAIFLELYQLLLYLFSDWTKVSLVCRYVRRSSRGSLRLSLLlrLLLRL 299
|
330
....*....|....*..
gi 2022376247 352 EKRPLWSNSMGQFSFLS 368
Cdd:pfam13968 300 VSKRRWSNKIGQYNLLD 316
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
821-1066 |
1.67e-37 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 141.75 E-value: 1.67e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 821 IDEPTNDMIKWLTEGGDsvqkLKVVSIWGPGGLGKTTLARQVYDK---IARQFDYRAFVSVSQKPDMRKIFRNILTSLtG 897
Cdd:pfam00931 1 REDMVEKVIGKLSEKDE----PGIVGIHGMGGVGKTTLAAQIFNDfdeVEGHFDSVAWVVVSKTFTISTLQQTILQNL-G 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 898 VEHVGIEAWDEELLINKLRDFIDGKRYFIVIDDIWSTTDWQTIRCVLLDSNIGSRVLTTTQISYVAESccLSDQDKVFEM 977
Cdd:pfam00931 76 LSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGR--VGGPSDPHEV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 978 KHLSAIHAEKLFLKRIFGSGDNCPPHLKEVSDDILRRCGGLPLAIITMASLLVNKpQTEEQWEKYRDSI----VENDPIV 1053
Cdd:pfam00931 154 ELLEPDEAWELFENKVFPKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK-KTVEEWKHVYDVLqselKSNSYSL 232
|
250
....*....|...
gi 2022376247 1054 KKMQEILSLSYTD 1066
Cdd:pfam00931 233 NSVRSILQLSYEN 245
|
|
| Rx_N |
pfam18052 |
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ... |
661-753 |
3.18e-29 |
|
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.
Pssm-ID: 436239 Cd Length: 93 Bit Score: 112.36 E-value: 3.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 661 VVSLVLEKISTLIEKEYSKLKGVRDEILSLKDELSSMNALLLKLSDIEDLDVQVKEWRNQIRELSYDIEDCIDNFMHQVG 740
Cdd:pfam18052 1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLDEFLYEAL 80
|
90
....*....|...
gi 2022376247 741 SSSNNSDMKCFCR 753
Cdd:pfam18052 81 RRKSSPKKLKFRH 93
|
|
| RX-CC_like |
cd14798 |
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ... |
660-784 |
2.81e-27 |
|
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.
Pssm-ID: 271353 [Multi-domain] Cd Length: 124 Bit Score: 108.09 E-value: 2.81e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 660 GVVSLVLEKISTLIEKEYSKLKGVRDEILSLKDELSSMNALLLKLSDIEDLDVQVKEWRNQIRELSYDIEDCIDNFMHQV 739
Cdd:cd14798 3 AAVSFLLEKLGELLEQEADLLSGVKEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIDSFLLKL 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2022376247 740 GSSSNNSDMKCFCRKIIHQVRALgacHAIANNILKLKARVDSASE 784
Cdd:cd14798 83 VPDKRRGGFLKRLFSLLKELKEL---HQVAKEIQSIKSRIKDISS 124
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1216-1345 |
1.80e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.91 E-value: 1.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1216 ISEFQSLRVINIENND--TLDNhylnGIGRLFQLKYLRLIEVSISKLPEEIGELQQLVTLELEHTKIKELPKGITRLKNL 1293
Cdd:COG4886 132 LANLTNLKELDLSNNQltDLPE----PLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNL 207
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 1294 VFLRADY---KSLPKGIGNMKALQKLSwvkVNSTAPSvTLQEMGDLTELRYLDLS 1345
Cdd:COG4886 208 EELDLSGnqlTDLPEPLANLTNLETLD---LSNNQLT-DLPELGNLTNLEELDLS 258
|
|
| DUF594 |
pfam04578 |
Protein of unknown function, DUF594; |
564-618 |
6.39e-16 |
|
Protein of unknown function, DUF594;
Pssm-ID: 461358 Cd Length: 55 Bit Score: 73.34 E-value: 6.39e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 564 EQEEPRAWLEtlvEIRDMWMRLLIYVAGKCQVELHAQQLGRGGELLTFVWLLMVH 618
Cdd:pfam04578 1 EKEDEEKRWE---VLADVWVEMLCYAAPSCRAEAHAKQLARGGELITHVWLLLTH 52
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
816-1029 |
1.45e-08 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 59.89 E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 816 ESLVGIDEPTNDMIKWLTEGGDSVqklKVVSIWGPGGLGKTTLARQVYDKIARQFDY-----RAFVSVSQK------PD- 883
Cdd:PLN03210 184 EDFVGIEDHIAKMSSLLHLESEEV---RMVGIWGSSGIGKTTIARALFSRLSRQFQSsvfidRAFISKSMEiyssanPDd 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 884 --MR-KIFRNILTSLTG-----VEHVGieAWDEELLINKLRDFIDGKRYFIVIDDIWSTTDWqtircvlldSNIGSRVLT 955
Cdd:PLN03210 261 ynMKlHLQRAFLSEILDkkdikIYHLG--AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW---------FGSGSRIIV 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 956 TTQ---------ISYVAEsCCLSDQDKVFEMKHLSAihaeklFLKrifgsgdNCPPH-LKEVSDDILRRCGGLPLAIITM 1025
Cdd:PLN03210 330 ITKdkhflrahgIDHIYE-VCLPSNELALEMFCRSA------FKK-------NSPPDgFMELASEVALRAGNLPLGLNVL 395
|
....
gi 2022376247 1026 ASLL 1029
Cdd:PLN03210 396 GSYL 399
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
844-1022 |
1.07e-06 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 53.48 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 844 VVSIWGPGGLGKTTLARQVYDKIARQF-DYRAFVSvsqkpdmrkifrniLTSLTGVEHV--------GIEAWDEELLINK 914
Cdd:COG3903 178 LVTLTGPGGVGKTRLALEVAHRLADRFpDGVWFVD--------------LAGVTDPALVlaavaralGVRDAPGRDPAAR 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 915 LRDFIDGKRYFIVIDDIWSTTDwQTIRCV--LLDSNIGSRVLTTTQ----ISyvAESCC----LSDQDKVFEMKHLSAIh 984
Cdd:COG3903 244 LRAALADRRLLLVLDNCEHVVD-AAAALVrpLLPAAPGLRVLATSReplgLP--GERVLplppLAVPPPGAEALASEAV- 319
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2022376247 985 aeKLFLKRI------FGSGDNCPPHLKEvsddILRRCGGLPLAI 1022
Cdd:COG3903 320 --ALFVERAgaarpgFALDAAEAAAVAE----ICRRLDGLPLAI 357
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
1221-1464 |
6.93e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 51.00 E-value: 6.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1221 SLRVINIENND--------------TLD--NHYLNG-----IGRLFQLKYLRLI-EVSISKLPEEIGELQQLVTLELEHT 1278
Cdd:PLN00113 119 SLRYLNLSNNNftgsiprgsipnleTLDlsNNMLSGeipndIGSFSSLKVLDLGgNVLVGKIPNSLTNLTSLEFLTLASN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1279 K-IKELPKGITRLKNLVFLRADYKSL----PKGIGNMKALQKLSWVKVNSTAPSVTlqEMGDLTELRYLDLswciddmYS 1353
Cdd:PLN00113 199 QlVGQIPRELGQMKSLKWIYLGYNNLsgeiPYEIGGLTSLNHLDLVYNNLTGPIPS--SLGNLKNLQYLFL-------YQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1354 GMksYTESFVSSIIRLcqhklqylrirsdvSKGCSLKFMLDSWSSP-PHL------LQKFDMFTDYYFPRIPEWMASLSK 1426
Cdd:PLN00113 270 NK--LSGPIPPSIFSL--------------QKLISLDLSDNSLSGEiPELviqlqnLEILHLFSNNFTGKIPVALTSLPR 333
|
250 260 270
....*....|....*....|....*....|....*...
gi 2022376247 1427 ITFLDISVNPVGKDTLRILGNFRSLNALRLWTKTVASK 1464
Cdd:PLN00113 334 LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGE 371
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4220 |
pfam13968 |
Domain of unknown function (DUF4220); This family is found in plants and is often associated ... |
52-368 |
2.77e-61 |
|
Domain of unknown function (DUF4220); This family is found in plants and is often associated with DUF294, pfam04578.
Pssm-ID: 464058 Cd Length: 316 Bit Score: 212.99 E-value: 2.77e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 52 LAYVGADMVAVYALGLISrnvqsantsdgSGRSSNRLAFFWVPFLLIHLGGQDTMTAFSIEDNNLWLRHLLNLSIQVYLA 131
Cdd:pfam13968 1 LAYLLADPLATYTLGLMQ-----------SSPFKNELFAVWAPFLLLHLGGPDTITAYSLEDNELWLRHLLGLLLQVILV 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 132 LYAFWKSTGRHSLQ---LLAPAILVFHAGIIRYGERTWALKCGSRdglketsWQLPKLNVEIDKGSYLDTIcyVLKSILC 208
Cdd:pfam13968 70 LYVILKGLGTRLSAptiLTAPLWLLFVLGVIKYGERTWALRLASR-------GRSSKLVADYMRYEHFDPV--TMEGYRC 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 209 VH--------DLFSGRTI---SQMKERHVFRFQG---DRPLEQVSKLLEVELAMMYDDLYTKAMVLRIRSGFILRCIShV 274
Cdd:pfam13968 141 LSfalfkllrRRFVDLLIlseAGLEKTRDFVFDGldeDLDYERAFRVIEVELSFLYDFFYTKAAVLHSWGGLSLFLTL-L 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 275 FMIAAFVLFLTACSKQQYNR-ADIAITYVLFIGGFVLDVCSIFLVAMSPWTWAFFRAQNCHRLAHISWLILCS--HIGWP 351
Cdd:pfam13968 220 LALVLFVVLSKLGSISAVDRvVDVIITYVLLAGAIFLELYQLLLYLFSDWTKVSLVCRYVRRSSRGSLRLSLLlrLLLRL 299
|
330
....*....|....*..
gi 2022376247 352 EKRPLWSNSMGQFSFLS 368
Cdd:pfam13968 300 VSKRRWSNKIGQYNLLD 316
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
821-1066 |
1.67e-37 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 141.75 E-value: 1.67e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 821 IDEPTNDMIKWLTEGGDsvqkLKVVSIWGPGGLGKTTLARQVYDK---IARQFDYRAFVSVSQKPDMRKIFRNILTSLtG 897
Cdd:pfam00931 1 REDMVEKVIGKLSEKDE----PGIVGIHGMGGVGKTTLAAQIFNDfdeVEGHFDSVAWVVVSKTFTISTLQQTILQNL-G 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 898 VEHVGIEAWDEELLINKLRDFIDGKRYFIVIDDIWSTTDWQTIRCVLLDSNIGSRVLTTTQISYVAESccLSDQDKVFEM 977
Cdd:pfam00931 76 LSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGR--VGGPSDPHEV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 978 KHLSAIHAEKLFLKRIFGSGDNCPPHLKEVSDDILRRCGGLPLAIITMASLLVNKpQTEEQWEKYRDSI----VENDPIV 1053
Cdd:pfam00931 154 ELLEPDEAWELFENKVFPKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK-KTVEEWKHVYDVLqselKSNSYSL 232
|
250
....*....|...
gi 2022376247 1054 KKMQEILSLSYTD 1066
Cdd:pfam00931 233 NSVRSILQLSYEN 245
|
|
| Rx_N |
pfam18052 |
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ... |
661-753 |
3.18e-29 |
|
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.
Pssm-ID: 436239 Cd Length: 93 Bit Score: 112.36 E-value: 3.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 661 VVSLVLEKISTLIEKEYSKLKGVRDEILSLKDELSSMNALLLKLSDIEDLDVQVKEWRNQIRELSYDIEDCIDNFMHQVG 740
Cdd:pfam18052 1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLDEFLYEAL 80
|
90
....*....|...
gi 2022376247 741 SSSNNSDMKCFCR 753
Cdd:pfam18052 81 RRKSSPKKLKFRH 93
|
|
| RX-CC_like |
cd14798 |
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ... |
660-784 |
2.81e-27 |
|
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.
Pssm-ID: 271353 [Multi-domain] Cd Length: 124 Bit Score: 108.09 E-value: 2.81e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 660 GVVSLVLEKISTLIEKEYSKLKGVRDEILSLKDELSSMNALLLKLSDIEDLDVQVKEWRNQIRELSYDIEDCIDNFMHQV 739
Cdd:cd14798 3 AAVSFLLEKLGELLEQEADLLSGVKEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIDSFLLKL 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2022376247 740 GSSSNNSDMKCFCRKIIHQVRALgacHAIANNILKLKARVDSASE 784
Cdd:cd14798 83 VPDKRRGGFLKRLFSLLKELKEL---HQVAKEIQSIKSRIKDISS 124
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1216-1345 |
1.80e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.91 E-value: 1.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1216 ISEFQSLRVINIENND--TLDNhylnGIGRLFQLKYLRLIEVSISKLPEEIGELQQLVTLELEHTKIKELPKGITRLKNL 1293
Cdd:COG4886 132 LANLTNLKELDLSNNQltDLPE----PLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNL 207
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 1294 VFLRADY---KSLPKGIGNMKALQKLSwvkVNSTAPSvTLQEMGDLTELRYLDLS 1345
Cdd:COG4886 208 EELDLSGnqlTDLPEPLANLTNLETLD---LSNNQLT-DLPELGNLTNLEELDLS 258
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1226-1479 |
4.29e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 4.29e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1226 NIENNDTLDNHYLNGIGRLFQLKYLRLIEVSISKLPEEIGELQQLVTLELEHTKIKELPKGITRLKNLVFLRADY---KS 1302
Cdd:COG4886 94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNnqlTD 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1303 LPKGIGNMKALQKLSwVKVN--STAPSvtlqEMGDLTELRYLDLSwciddmYSGMKSYTESFVSSiirlcqHKLQYLRIR 1380
Cdd:COG4886 174 LPEELGNLTNLKELD-LSNNqiTDLPE----PLGNLTNLEELDLS------GNQLTDLPEPLANL------TNLETLDLS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1381 sdvskGCSLkfmldswSSPPHL-----LQKFDM----FTDyyfprIPEwMASLSKITFLDISVNPVGKDTLRILGNFRSL 1451
Cdd:COG4886 237 -----NNQL-------TDLPELgnltnLEELDLsnnqLTD-----LPP-LANLTNLKTLDLSNNQLTDLKLKELELLLGL 298
|
250 260
....*....|....*....|....*...
gi 2022376247 1452 NALRLWTKTVASKGEFIVRNIGFPCLEE 1479
Cdd:COG4886 299 NSLLLLLLLLNLLELLILLLLLTTLLLL 326
|
|
| DUF594 |
pfam04578 |
Protein of unknown function, DUF594; |
564-618 |
6.39e-16 |
|
Protein of unknown function, DUF594;
Pssm-ID: 461358 Cd Length: 55 Bit Score: 73.34 E-value: 6.39e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 564 EQEEPRAWLEtlvEIRDMWMRLLIYVAGKCQVELHAQQLGRGGELLTFVWLLMVH 618
Cdd:pfam04578 1 EKEDEEKRWE---VLADVWVEMLCYAAPSCRAEAHAKQLARGGELITHVWLLLTH 52
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1215-1456 |
1.37e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 68.42 E-value: 1.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1215 PISEFQSLRVINIENNDTLDNHYLNGIGRLFQLKYLRLIEVSISKLPEEIGELQQLVTLELEHTKIKELPKGITRLKNLV 1294
Cdd:COG4886 60 LLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLK 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1295 FLRADY---KSLPKGIGNMKALQKLSwVKVN--STAPSvtlqEMGDLTELRYLDLSWC-IDDmysgmksytesFVSSIIR 1368
Cdd:COG4886 140 ELDLSNnqlTDLPEPLGNLTNLKSLD-LSNNqlTDLPE----ELGNLTNLKELDLSNNqITD-----------LPEPLGN 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1369 LcqHKLQYLRIRsdvskGCSLKfmldswsspphllqkfdmftdyyfpRIPEWMASLSKITFLDISVNPVgkDTLRILGNF 1448
Cdd:COG4886 204 L--TNLEELDLS-----GNQLT-------------------------DLPEPLANLTNLETLDLSNNQL--TDLPELGNL 249
|
....*...
gi 2022376247 1449 RSLNALRL 1456
Cdd:COG4886 250 TNLEELDL 257
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
816-1029 |
1.45e-08 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 59.89 E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 816 ESLVGIDEPTNDMIKWLTEGGDSVqklKVVSIWGPGGLGKTTLARQVYDKIARQFDY-----RAFVSVSQK------PD- 883
Cdd:PLN03210 184 EDFVGIEDHIAKMSSLLHLESEEV---RMVGIWGSSGIGKTTIARALFSRLSRQFQSsvfidRAFISKSMEiyssanPDd 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 884 --MR-KIFRNILTSLTG-----VEHVGieAWDEELLINKLRDFIDGKRYFIVIDDIWSTTDWqtircvlldSNIGSRVLT 955
Cdd:PLN03210 261 ynMKlHLQRAFLSEILDkkdikIYHLG--AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW---------FGSGSRIIV 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 956 TTQ---------ISYVAEsCCLSDQDKVFEMKHLSAihaeklFLKrifgsgdNCPPH-LKEVSDDILRRCGGLPLAIITM 1025
Cdd:PLN03210 330 ITKdkhflrahgIDHIYE-VCLPSNELALEMFCRSA------FKK-------NSPPDgFMELASEVALRAGNLPLGLNVL 395
|
....
gi 2022376247 1026 ASLL 1029
Cdd:PLN03210 396 GSYL 399
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
844-1022 |
1.07e-06 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 53.48 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 844 VVSIWGPGGLGKTTLARQVYDKIARQF-DYRAFVSvsqkpdmrkifrniLTSLTGVEHV--------GIEAWDEELLINK 914
Cdd:COG3903 178 LVTLTGPGGVGKTRLALEVAHRLADRFpDGVWFVD--------------LAGVTDPALVlaavaralGVRDAPGRDPAAR 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 915 LRDFIDGKRYFIVIDDIWSTTDwQTIRCV--LLDSNIGSRVLTTTQ----ISyvAESCC----LSDQDKVFEMKHLSAIh 984
Cdd:COG3903 244 LRAALADRRLLLVLDNCEHVVD-AAAALVrpLLPAAPGLRVLATSReplgLP--GERVLplppLAVPPPGAEALASEAV- 319
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2022376247 985 aeKLFLKRI------FGSGDNCPPHLKEvsddILRRCGGLPLAI 1022
Cdd:COG3903 320 --ALFVERAgaarpgFALDAAEAAAVAE----ICRRLDGLPLAI 357
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
1221-1464 |
6.93e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 51.00 E-value: 6.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1221 SLRVINIENND--------------TLD--NHYLNG-----IGRLFQLKYLRLI-EVSISKLPEEIGELQQLVTLELEHT 1278
Cdd:PLN00113 119 SLRYLNLSNNNftgsiprgsipnleTLDlsNNMLSGeipndIGSFSSLKVLDLGgNVLVGKIPNSLTNLTSLEFLTLASN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1279 K-IKELPKGITRLKNLVFLRADYKSL----PKGIGNMKALQKLSWVKVNSTAPSVTlqEMGDLTELRYLDLswciddmYS 1353
Cdd:PLN00113 199 QlVGQIPRELGQMKSLKWIYLGYNNLsgeiPYEIGGLTSLNHLDLVYNNLTGPIPS--SLGNLKNLQYLFL-------YQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1354 GMksYTESFVSSIIRLcqhklqylrirsdvSKGCSLKFMLDSWSSP-PHL------LQKFDMFTDYYFPRIPEWMASLSK 1426
Cdd:PLN00113 270 NK--LSGPIPPSIFSL--------------QKLISLDLSDNSLSGEiPELviqlqnLEILHLFSNNFTGKIPVALTSLPR 333
|
250 260 270
....*....|....*....|....*....|....*...
gi 2022376247 1427 ITFLDISVNPVGKDTLRILGNFRSLNALRLWTKTVASK 1464
Cdd:PLN00113 334 LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGE 371
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1214-1303 |
1.45e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 49.55 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 1214 PPISEFQSLRVINIENND--TLDNhylnGIGRLFQLKYLRLIEVSISKLPEeIGELQQLVTLELEHTKIKELPKgITRLK 1291
Cdd:COG4886 199 EPLGNLTNLEELDLSGNQltDLPE----PLANLTNLETLDLSNNQLTDLPE-LGNLTNLEELDLSNNQLTDLPP-LANLT 272
|
90
....*....|..
gi 2022376247 1292 NLVFLRADYKSL 1303
Cdd:COG4886 273 NLKTLDLSNNQL 284
|
|
| COG1373 |
COG1373 |
Predicted ATPase, AAA+ superfamily [General function prediction only]; |
843-1050 |
3.06e-03 |
|
Predicted ATPase, AAA+ superfamily [General function prediction only];
Pssm-ID: 440984 [Multi-domain] Cd Length: 405 Bit Score: 41.85 E-value: 3.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 843 KVVSIWGPGGLGKTTLARQVYDKIaRQFDYRAFvsvsQKPDMRKIFRNiltsltgvehvgieawDEELLINKLRDFIDGK 922
Cdd:COG1373 21 KAVVITGPRQVGKTTLLKQLAKEL-ENILYINL----DDPRLRALAEE----------------DPDDLLEALKELYPGK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2022376247 923 RYfIVIDDI-----WSTT------DWQTIRCVLLDSNIG--SRVLTTTQISYVAEscclsdqdkvFEMKHLSA---IHAE 986
Cdd:COG1373 80 TY-LFLDEIqrvpeWEDAlkrlvdDGRNGRFILTGSSSLllSKELAESLAGRIES----------LELYPLSFrefLEAK 148
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2022376247 987 KLFLKRIFGSGDNCPPHLKEVSDDILRrcGGLPlaiitmASLLVNKPQTEEQW-EKYRDSIVEND 1050
Cdd:COG1373 149 GESLDDLLPLSEEHDELLELLEEYLLR--GGFP------EAVLLDDERDKRRWlKSYIETILERD 205
|
|
| RarA |
COG2256 |
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, ... |
848-888 |
3.59e-03 |
|
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, recombination and repair];
Pssm-ID: 441857 [Multi-domain] Cd Length: 439 Bit Score: 41.58 E-value: 3.59e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2022376247 848 WGPGGLGKTTLARQvydkIARQFDYRaFVSVSQ----KPDMRKIF 888
Cdd:COG2256 55 WGPPGTGKTTLARL----IANATDAE-FVALSAvtsgVKDIREVI 94
|
|
| PRK13342 |
PRK13342 |
recombination factor protein RarA; Reviewed |
848-888 |
6.54e-03 |
|
recombination factor protein RarA; Reviewed
Pssm-ID: 237355 [Multi-domain] Cd Length: 413 Bit Score: 40.84 E-value: 6.54e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2022376247 848 WGPGGLGKTTLARQvydkIARQFDYRaFVSVS----QKPDMRKIF 888
Cdd:PRK13342 42 WGPPGTGKTTLARI----IAGATDAP-FEALSavtsGVKDLREVI 81
|
|
| |
