NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1985396602|ref|XP_039338997|]
View 

dnaJ homolog subfamily B member 8 [Mauremys reevesii]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-108 2.88e-39

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.74  E-value: 2.88e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGF 83

                          90       100
                  ....*....|....*....|....*.
gi 1985396602  83 GHFhSPFDSeyIFrnpEEIFREFFAG 108
Cdd:PRK10767   84 GGG-GGFGD--IF---GDIFGDIFGG 103
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-108 2.88e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.74  E-value: 2.88e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGF 83

                          90       100
                  ....*....|....*....|....*.
gi 1985396602  83 GHFhSPFDSeyIFrnpEEIFREFFAG 108
Cdd:PRK10767   84 GGG-GGFGD--IF---GDIFGDIFGG 103
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.65e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.12  E-value: 4.65e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-108 6.69e-36

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 129.64  E-value: 6.69e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNnkEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATGG 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100
                  ....*....|....*....|....*
gi 1985396602  84 hfHSPFDSEYiFRNPEEIFREFFAG 108
Cdd:TIGR02349  80 --FNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-113 1.04e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.27  E-value: 1.04e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGK----ESRQRGGR 78
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHaaelLLATELAE 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1985396602  79 GATGGHFHSPFDSEYIFRNPEEIFREFFAGMDPFA 113
Cdd:COG0484    80 SAAAEAAAAEAKEEAAEAGASEYEAIAEEASQLRL 114
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 6.48e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.79  E-value: 6.48e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602    2 VNYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEEAEKKFKAVAEAYEVLSDPQK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 8.49e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.31  E-value: 8.49e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNkEEAEKKFKAVAEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-118 4.17e-25

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 101.82  E-value: 4.17e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQrgGRGATG 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDR--NKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVD--GEGGFG 81

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1985396602  83 ghfhspFDseyifrnPEEIFREFF---AGMDPFAHDFWD 118
Cdd:NF037946   82 ------FD-------AFDVFSSFFetiNKSGAFLDDSVD 107
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-108 2.88e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.74  E-value: 2.88e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGF 83

                          90       100
                  ....*....|....*....|....*.
gi 1985396602  83 GHFhSPFDSeyIFrnpEEIFREFFAG 108
Cdd:PRK10767   84 GGG-GGFGD--IF---GDIFGDIFGG 103
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.65e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.12  E-value: 4.65e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-108 6.69e-36

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 129.64  E-value: 6.69e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNnkEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATGG 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100
                  ....*....|....*....|....*
gi 1985396602  84 hfHSPFDSEYiFRNPEEIFREFFAG 108
Cdd:TIGR02349  80 --FNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-113 1.04e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.27  E-value: 1.04e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGK----ESRQRGGR 78
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHaaelLLATELAE 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1985396602  79 GATGGHFHSPFDSEYIFRNPEEIFREFFAGMDPFA 113
Cdd:COG0484    80 SAAAEAAAAEAKEEAAEAGASEYEAIAEEASQLRL 114
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-153 9.43e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 121.80  E-value: 9.43e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKES-RQRGGRGATG 82
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGlSGTGFSGFSG 84

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1985396602  83 ghfhspFDSeyIFRNPEEIFREFFagmdpfahdfwdipfdgNVGENRnRTRGRGASFAGFDVFPDLMESFM 153
Cdd:PRK14294   85 ------FDD--IFSSFGDIFEDFF-----------------GFGGGR-RGRSRTAVRAGADLRYDLTLPFL 129
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 6.48e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.79  E-value: 6.48e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602    2 VNYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEEAEKKFKAVAEAYEVLSDPQK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-144 8.46e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 119.13  E-value: 8.46e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSG--KESRQRGGRGA 80
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGyvGEQPPYQETES 84

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1985396602  81 TGGHFhspfdseyifrnpEEIFREFfagMDPFAHDFWDIPFdgnvGENRNRTRGRGASFAGFDV 144
Cdd:PRK14282   85 GGGFF-------------EDIFKDF---ENIFNRDIFDIFF----GERRTQEEQREYARRGEDI 128
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-152 1.33e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 118.69  E-value: 1.33e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNkEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGrgaTG 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG---GF 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602  83 GHFHSpfdSEYIFRNPEEIFREFFAgmdpfahdfwdipFDGNVGENRNRTRgrgasfAGFDVFPDLMESF 152
Cdd:PRK14301   81 GGFSS---AEDIFSHFSDIFGDLFG-------------FSGGGSRRGPRPQ------AGSDLRYNLTVSF 128
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-117 4.63e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 116.95  E-value: 4.63e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNW 83

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1985396602  83 GHFHSpfdseyiFRNPEEIFREFFAGmdPFAHDFW 117
Cdd:PRK14290   84 DNFTH-------FSDINDIFNQIFGG--NFGSDFF 109
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-139 2.42e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 115.64  E-value: 2.42e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNnkEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1985396602  83 GHFHSPFDseyiFRNPEEIFREFFAGMdpfahDFWDIpfdgnvGENRNRTRGRGASF 139
Cdd:PRK14291   82 QEGFSDFG----GGNIEDILEDVFDIF-----GFGDI------FGRRRATRERRKTY 123
PRK14297 PRK14297
molecular chaperone DnaJ;
3-108 5.43e-30

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 114.50  E-value: 5.43e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGrGATG 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG-GFGS 82

                          90       100
                  ....*....|....*....|....*.
gi 1985396602  83 GHFHSpFDSEYiFRNPEEIFREFFAG 108
Cdd:PRK14297   83 GGFGG-FDFSD-MGGFGDIFDSFFGG 106
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 4-108 6.30e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 114.41  E-value: 6.30e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNpnnKEE-AEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQrGGRGATG 82
Cdd:PRK14276    6 YYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN---KEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGAN-GGFGGGA 81

                          90       100
                  ....*....|....*....|....*.
gi 1985396602  83 GHFhSPFDSEYIFRNPEEIFREFFAG 108
Cdd:PRK14276   82 GGF-GGFDGSGGFGGFEDIFSSFFGG 106
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-137 3.38e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 112.63  E-value: 3.38e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEeAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1985396602  83 GHfhspfdseyiFRNPEEIFREF---FAGMDPFAHDFWDIPFDGNVGENRNRTRGRGA 137
Cdd:PRK14284   81 AG----------MGNMEDALRTFmgaFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGA 128
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-76 3.69e-29

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 104.80  E-value: 3.69e-29
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602   1 MVNYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRG 76
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGS 79
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-108 2.31e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 109.94  E-value: 2.31e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGkesrqrggrgatg 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDK--NKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFG------------- 70

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1985396602  83 ghfHSPFDSEY----IFRNP-----EEIFREFFAG 108
Cdd:PRK14298   71 ---HAGIDNQYsaedIFRGAdfggfGDIFEMFFGG 102
PRK14280 PRK14280
molecular chaperone DnaJ;
3-108 2.62e-28

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 109.81  E-value: 2.62e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpnNKEE-AEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGat 81
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI---NKEEgADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGG-- 79

                          90       100
                  ....*....|....*....|....*..
gi 1985396602  82 GGHFHSPFDSEYIFrnpEEIFREFFAG 108
Cdd:PRK14280   80 GGFGGGDFGGGFGF---EDIFSSFFGG 103
PRK14289 PRK14289
molecular chaperone DnaJ;
3-112 3.05e-28

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 109.92  E-value: 3.05e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGkesrQRGGRGATG 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFG----HAGVGGAAG 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1985396602  83 GHFHSP--FDSEYIFRNPEEIFREFFAGMDPF 112
Cdd:PRK14289   81 GGGFSGegMSMEDIFSMFGDIFGGHGGGFGGF 112
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-109 5.14e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 109.12  E-value: 5.14e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100       110
                  ....*....|....*....|....*....|
gi 1985396602  83 ---GHFHSPFdSEYIFRNPEEIFREFFAGM 109
Cdd:PRK14277   85 fgqGGFGGGG-FDFDFGGFGDIFEDIFGDF 113
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-108 5.42e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 108.92  E-value: 5.42e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQrGGRGATGG 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVN-AGAGGFGQ 83

                          90       100
                  ....*....|....*....|....*
gi 1985396602  84 HFHSPFDSeyIFRNPEEIFREFFAG 108
Cdd:PRK14286   84 GAYTDFSD--IFGDFGDIFGDFFGG 106
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 8.49e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.31  E-value: 8.49e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNkEEAEKKFKAVAEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-136 4.12e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 106.61  E-value: 4.12e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGG--RGA 80
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGgfEGF 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602  81 TGGhfhspfdseyiFRNPEEIFREFfagmdpfaHDFWDIPFDGNVGENRNRTRGRG 136
Cdd:PRK14285   83 SGG-----------FSGFSDIFEDF--------GDIFDSFFTGNRGQDKNRKHEKG 119
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-83 6.37e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 106.43  E-value: 6.37e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGK----ESRQRGGR 78
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHagvgSSAASGGG 82


                  ....*
gi 1985396602  79 GATGG 83
Cdd:PRK14281   83 PGYGG 87
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-108 3.65e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 103.98  E-value: 3.65e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNnkEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGAT- 81
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGf 81

                          90       100
                  ....*....|....*....|....*..
gi 1985396602  82 GGHFHSPFDseyifrnpeeIFREFFAG 108
Cdd:PRK14278   82 GGGFGGLGD----------VFEAFFGG 98
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 1.00e-25

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 95.07  E-value: 1.00e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-118 4.17e-25

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 101.82  E-value: 4.17e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQrgGRGATG 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDR--NKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVD--GEGGFG 81

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1985396602  83 ghfhspFDseyifrnPEEIFREFF---AGMDPFAHDFWD 118
Cdd:NF037946   82 ------FD-------AFDVFSSFFetiNKSGAFLDDSVD 107
PRK14279 PRK14279
molecular chaperone DnaJ;
3-85 4.54e-24

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 98.65  E-value: 4.54e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDrsgkESRQ-------R 75
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYD----ETRRlfagggfG 84

                          90
                  ....*....|
gi 1985396602  76 GGRGATGGHF 85
Cdd:PRK14279   85 GRRFDGGGGF 94
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-108 6.57e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 96.55  E-value: 6.57e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNpnNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRG--- 79
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVN--KSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGppp 82

                          90       100       110
                  ....*....|....*....|....*....|
gi 1985396602  80 -ATGGHFHSPFDSEyifrNPEEIFREFFAG 108
Cdd:PRK14299   83 gPPGGGDFSGFNVG----DFSDFFQQLFGG 108
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-137 8.35e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 97.59  E-value: 8.35e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDrsgkesrQRGGRGATG 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDV--SEEEGAEEKFKEISEAYAVLSDDEKRQRYD-------QFGHAGMDG 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602  83 ghfhspFDSEYIFRNPEeiFREFFAGmdpFAHDFWDIpFDG-NVGENRNRTRGRGA 137
Cdd:PRK14283   77 ------FSQEDIFNNIN--FEDIFQG---FGFGIGNI-FDMfGFGGGSRHGPQRGA 120
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-108 1.44e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 96.88  E-value: 1.44e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   1 MVNYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPnnKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESrqrgGRGA 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK--EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP----GAGM 74

                          90       100
                  ....*....|....*....|....*...
gi 1985396602  81 TGGhfhSPFDSeyIFRNPEEIFREFFAG 108
Cdd:PRK14292   75 PGG---DPFGG--MGFDPMDIFEQLFGG 97
PRK14295 PRK14295
molecular chaperone DnaJ;
3-90 1.30e-22

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 94.53  E-value: 1.30e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRS----GKESRQRGGR 78
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDEArslfGNGGFRPGPG 88

                          90
                  ....*....|..
gi 1985396602  79 GATGGHFhsPFD 90
Cdd:PRK14295   89 GGGGGGF--NFD 98
PRK14293 PRK14293
molecular chaperone DnaJ;
1-82 1.11e-21

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 91.59  E-value: 1.11e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   1 MVNYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpnNKEE-AEKKFKAVAEAYEVLSDPQKRSIYDRSGKEsrqrGGRG 79
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEA----GVSG 74


                  ...
gi 1985396602  80 ATG 82
Cdd:PRK14293   75 AAG 77
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-107 1.85e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 91.23  E-value: 1.85e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNpnNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQ----RGGR 78
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQnqqsRGGG 81

                          90       100
                  ....*....|....*....|....*....
gi 1985396602  79 GATGGhFHSPFDseyifrnpeEIFREFFA 107
Cdd:PRK14300   82 GNHGG-FHPDIN---------DIFGDFFS 100
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-108 3.97e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 90.07  E-value: 3.97e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATG 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDV--NKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA 82

                          90       100
                  ....*....|....*....|....*.
gi 1985396602  83 GHFHSPFDseyifrnpeeIFREFFAG 108
Cdd:PRK14287   83 GDFGGFSD----------IFDMFFGG 98
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-80 9.14e-21

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 89.49  E-value: 9.14e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1985396602   4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNnkeeaEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGGRGA 80
Cdd:PTZ00037   30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA 101
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-136 2.82e-19

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 86.02  E-value: 2.82e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGkesrqrggrgatg 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDR--NKAPDAASIFAEINEANDVLSNPKKRANYDKYG------------- 67

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1985396602  83 ghfHSPFDSEYIFRNPEEIFREFFAGMDPfAHDFWDIPFDGNVGENRNRTRGRG 136
Cdd:TIGR03835  68 ---HDGVDREDDFDFQADVFNSFFEEINK-SGEFDNITDDDTPSKKKKKKKKKG 117
PRK14288 PRK14288
molecular chaperone DnaJ;
2-77 6.76e-19

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 83.97  E-value: 6.76e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602   2 VNYYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKeEAEKKFKAVAEAYEVLSDPQKRSIYDRSGKESRQRGG 77
Cdd:PRK14288    3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG 77
PRK10266 PRK10266
curved DNA-binding protein;
3-91 5.18e-16

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 75.24  E-value: 5.18e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPD--KNPNnkeeAEKKFKAVAEAYEVLSDPQKRSIYD---------RSGKE 71
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDqlwqhrndpQFNRQ 80

                          90       100
                  ....*....|....*....|
gi 1985396602  72 SRQRGGRGATGGHFHSPFDS 91
Cdd:PRK10266   81 FQHGDGQSFNAEDFDDIFSS 100
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-149 8.02e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 75.37  E-value: 8.02e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   3 NYYEVLGLHQKASQDDIKKSYRKLALKWHPDKnpNNKEEAEKKFKAVAEAYEVLSDPQKRSIYDRSGkesrqrggrgatg 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDL--NKSPDAHDKMVEINEAADVLLDKDKRKQYDQFG------------- 69

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1985396602  83 ghfHSPFDSEYIFRNPEEIFREFFAGMDPFA-HDFWDI---PFDGNVGENRNRTRGRGASFAGFDVFPDLM 149
Cdd:PRK14296   70 ---HAAFDGSSGFSSNFGDFEDLFSNMGSSGfSSFTNIfsdFFGSNKSDYQRSTKGQSVSLDIYLTFKELL 137
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 2.65e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.59  E-value: 2.65e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1985396602   1 MVNYYEVLGLHQKASQDDIKKSYRKLALKWHPDK-----NPNNKEEAEKKFKAVAEAYEVLSDPQKRSI 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-69 9.58e-09

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 55.18  E-value: 9.58e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1985396602    4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNkeEAEKKFKAVAEAYEVLSDPQKRSIYDRSG 69
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFG 638
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 1.18e-08

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 52.57  E-value: 1.18e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   1 MVNYYEVLGLHQKASQD--DIKKSYRKLALKWHPDKnPNNKEEAEKKFKAVAE---AYEVLSDPQKRSIY 65
Cdd:PRK01356    1 MQNYFQLLGLPQEYNIDlkILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 8.70e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 48.88  E-value: 8.70e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1985396602   2 VNYYEVLGLHQ---KASQDDIKKSYRKLALKWHPDKNPNNKEEAEKK-FKAVAEAYEVLSDPQKRSIYD 66
Cdd:COG5269    43 VDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
5-34 1.13e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 42.11  E-value: 1.13e-04
                          10        20        30
                  ....*....|....*....|....*....|
gi 1985396602   5 YEVLGLHQKASQDDIKKSYRKLALKWHPDK 34
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
PHA03102 PHA03102
Small T antigen; Reviewed
 6-105 9.13e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 35.42  E-value: 9.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1985396602   6 EVLGL--HQKASQDDIKKSYRKLALKWHPDKNPNnkeeaEKKFKAVAEAYEVL--SDPQKRSIYDRSGKESRQRGGRGAT 81
Cdd:PHA03102    9 DLLGLprSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFreSVKSLRDLDGEEDSSSEEEDVPSGY 83

                          90       100
                  ....*....|....*....|....
gi 1985396602  82 GGHFHSPFDSEYIFRNPEEIFREF 105
Cdd:PHA03102   84 VGATFGDRVNALYCKDWDTCLKNL 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH