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Conserved domains on  [gi|1958790585|ref|XP_038935518|]
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chromobox protein homolog 7 isoform X3 [Rattus norvegicus]

Protein Classification

CBX7_C domain-containing protein( domain architecture ID 12183023)

CBX7_C domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CBX7_C pfam17218
CBX family C-terminal motif; This motif is found at the C-terminus of CBX family proteins. It ...
155-186 1.80e-09

CBX family C-terminal motif; This motif is found at the C-terminus of CBX family proteins. It is bound by the RAWUL domain of the RING1B protein.


:

Pssm-ID: 465385  Cd Length: 33  Bit Score: 51.08  E-value: 1.80e-09
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1958790585 155 PPWTPML-PSSEVTVTDITANSVTVTFREAQAA 186
Cdd:pfam17218   1 EYWRPSPaPPDKVVVTDVTANSLTVTFRECSTA 33
 
Name Accession Description Interval E-value
CBX7_C pfam17218
CBX family C-terminal motif; This motif is found at the C-terminus of CBX family proteins. It ...
155-186 1.80e-09

CBX family C-terminal motif; This motif is found at the C-terminus of CBX family proteins. It is bound by the RAWUL domain of the RING1B protein.


Pssm-ID: 465385  Cd Length: 33  Bit Score: 51.08  E-value: 1.80e-09
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1958790585 155 PPWTPML-PSSEVTVTDITANSVTVTFREAQAA 186
Cdd:pfam17218   1 EYWRPSPaPPDKVVVTDVTANSLTVTFRECSTA 33
 
Name Accession Description Interval E-value
CBX7_C pfam17218
CBX family C-terminal motif; This motif is found at the C-terminus of CBX family proteins. It ...
155-186 1.80e-09

CBX family C-terminal motif; This motif is found at the C-terminus of CBX family proteins. It is bound by the RAWUL domain of the RING1B protein.


Pssm-ID: 465385  Cd Length: 33  Bit Score: 51.08  E-value: 1.80e-09
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1958790585 155 PPWTPML-PSSEVTVTDITANSVTVTFREAQAA 186
Cdd:pfam17218   1 EYWRPSPaPPDKVVVTDVTANSLTVTFRECSTA 33
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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