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Conserved domains on  [gi|1958788865|ref|XP_038934832|]
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glucoside xylosyltransferase 1 isoform X2 [Rattus norvegicus]

Protein Classification

glycosyltransferase family 8 protein( domain architecture ID 10157678)

glycosyltransferase family 8 protein similar to glucoside xylosyltransferase, which acts as a glycosyltransferase that elongates the O-linked glucose attached to EGF-like repeats in the extracellular domain of Notch proteins by catalyzing the addition of xylose

CATH:  3.90.550.10
CAZY:  GT8
EC:  2.4.-.-
Gene Ontology:  GO:0016757|GO:0006486
SCOP:  3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT8_like_2 cd06430
GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of ...
1-301 0e+00

GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


:

Pssm-ID: 133052  Cd Length: 304  Bit Score: 597.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   1 MHLAVVACGDRLEETVTMLKSALIFSIKPLHVHIFAEDQLHDSFKDRLDSWSFLQR--FNYSLYPITFPSDSAMEWKKLF 78
Cdd:cd06430     1 MHLAVVACGERLEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDrkFNYTLHPITFPSGNAAEWKKLF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  79 KPCASQRLFLPLILKGVDSLLYVDTDVLFLRPVDDIWSLLERFNSTQIAAMAPEHEEPRVGWYNRFARHPYYGRTGVNSG 158
Cdd:cd06430    81 KPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 159 VMLMNMTRMRRKYFKNDMTTARLQWGDILMPLLKKYKLNITWGDQDLLNIMFYHNPESLFVFPCQWNYRPDHCIYGSNCR 238
Cdd:cd06430   161 VMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCK 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958788865 239 EAEEEGVFILHGNRGVYHDDKQPAFRAMYEALRNCSLEDDSVRSLLKPLELELQKTVHTYCGK 301
Cdd:cd06430   241 AAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPLELSLQLTVHTYCGK 303
 
Name Accession Description Interval E-value
GT8_like_2 cd06430
GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of ...
1-301 0e+00

GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133052  Cd Length: 304  Bit Score: 597.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   1 MHLAVVACGDRLEETVTMLKSALIFSIKPLHVHIFAEDQLHDSFKDRLDSWSFLQR--FNYSLYPITFPSDSAMEWKKLF 78
Cdd:cd06430     1 MHLAVVACGERLEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDrkFNYTLHPITFPSGNAAEWKKLF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  79 KPCASQRLFLPLILKGVDSLLYVDTDVLFLRPVDDIWSLLERFNSTQIAAMAPEHEEPRVGWYNRFARHPYYGRTGVNSG 158
Cdd:cd06430    81 KPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 159 VMLMNMTRMRRKYFKNDMTTARLQWGDILMPLLKKYKLNITWGDQDLLNIMFYHNPESLFVFPCQWNYRPDHCIYGSNCR 238
Cdd:cd06430   161 VMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCK 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958788865 239 EAEEEGVFILHGNRGVYHDDKQPAFRAMYEALRNCSLEDDSVRSLLKPLELELQKTVHTYCGK 301
Cdd:cd06430   241 AAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPLELSLQLTVHTYCGK 303
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
3-230 1.39e-22

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 95.43  E-value: 1.39e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   3 LAVVACGDR--LEETVTMLKSALIFSI-KPLHVHIFAeDQLHDSFKDRLDSwsFLQRFNYSLYPITFPSD--SAMEWKKL 77
Cdd:COG1442     6 INIVFAIDDnyLPGLGVSIASLLENNPdRPYDFHILT-DGLSDENKERLEA--LAAKYNVSIEFIDVDDEllKDLPVSKH 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  78 FKPCASQRLFLPLIL-KGVDSLLYVDTDVLFLRPVDDIWSLleRFNStQIAAMAPEHEEPRVGWYNR-----FARHPYYg 151
Cdd:COG1442    83 ISKATYYRLLIPELLpDDYDKVLYLDADTLVLGDLSELWDI--DLGG-NLLAAVRDGTVTGSQKKRAkrlglPDDDGYF- 158
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958788865 152 rtgvNSGVMLMNMTRMRRKYFKNDMttarlqwgdilMPLLKKYKLNITWGDQDLLNIMFYHNPESLfvfPCQWNYRPDH 230
Cdd:COG1442   159 ----NSGVLLINLKKWREENITEKA-----------LEFLKENPDKLKYPDQDILNIVLGGKVKFL---PPRYNYQYSL 219
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
2-228 1.66e-06

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 48.47  E-value: 1.66e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   2 HLAVVACGDRLEETVTMLKSALIF-SIKPLHVHIFaedqlHDSFK-DRLDSWSFLQRFNYSLYPITFPSDSAMEWKKLFK 79
Cdd:pfam01501   1 CIALALDKNYLLGASVSIKSLLKNnSDFALNFHIF-----TDDIPvENLDILNWLASSYKPVLPLLESDIKIFEYFSKLK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  80 PCASQ--------RLFLPLILKGVDSLLYVDTDVLFLRPVDDIWSLleRFNSTQIAAMapeheEPRVGWYNRFARHPYYG 151
Cdd:pfam01501  76 LRSPKywsllnylRLYLPDLFPKLDKILYLDADIVVQGDLSPLWDI--DLGGKVLAAV-----EDNYFQRYPNFSEPIIL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 152 RTGV------NSGVMLMNMTR-MRRKYFKNDMTTARLQWGDILMPLlkkyklnitwGDQDLLNIMFYHNPESLfvfPCQW 224
Cdd:pfam01501 149 ENFGppacyfNAGMLLFDLDAwRKENITERYIKWLNLNENRTLWKL----------GDQDPLNIVFYGKVKPL---DPRW 215

                  ....
gi 1958788865 225 NYRP 228
Cdd:pfam01501 216 NVLG 219
 
Name Accession Description Interval E-value
GT8_like_2 cd06430
GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of ...
1-301 0e+00

GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133052  Cd Length: 304  Bit Score: 597.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   1 MHLAVVACGDRLEETVTMLKSALIFSIKPLHVHIFAEDQLHDSFKDRLDSWSFLQR--FNYSLYPITFPSDSAMEWKKLF 78
Cdd:cd06430     1 MHLAVVACGERLEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDrkFNYTLHPITFPSGNAAEWKKLF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  79 KPCASQRLFLPLILKGVDSLLYVDTDVLFLRPVDDIWSLLERFNSTQIAAMAPEHEEPRVGWYNRFARHPYYGRTGVNSG 158
Cdd:cd06430    81 KPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 159 VMLMNMTRMRRKYFKNDMTTARLQWGDILMPLLKKYKLNITWGDQDLLNIMFYHNPESLFVFPCQWNYRPDHCIYGSNCR 238
Cdd:cd06430   161 VMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCK 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958788865 239 EAEEEGVFILHGNRGVYHDDKQPAFRAMYEALRNCSLEDDSVRSLLKPLELELQKTVHTYCGK 301
Cdd:cd06430   241 AAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPLELSLQLTVHTYCGK 303
Glyco_transf_8 cd00505
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis ...
1-259 1.04e-91

Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis; Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.


Pssm-ID: 132996 [Multi-domain]  Cd Length: 246  Bit Score: 273.16  E-value: 1.04e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   1 MHLAVVACG-DRLEETVTMLKSALIFSIKPLHVHIFAEDqLHDSFKDRLDSWSFLQRFNYSLYPITFPSDSAMEW-KKLF 78
Cdd:cd00505     1 IAIVIVATGdEYLRGAIVLMKSVLRHRTKPLRFHVLTNP-LSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHlKRPI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  79 KPCASQRLFLPLILKGVDSLLYVDTDVLFLRPVDDIWsllERFNSTQIAAMAPEHEEPRVGWYNRFARHPYYGRTGVNSG 158
Cdd:cd00505    80 KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELW---DTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 159 VMLMNMTRMRrkyfkndmttarlqWGDILMPLLKKY---KLNITWGDQDLLNIMFYHNPESLFVFPCQWNYRPDHCIYGS 235
Cdd:cd00505   157 VFVVNLSKER--------------RNQLLKVALEKWlqsLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL 222
                         250       260
                  ....*....|....*....|....
gi 1958788865 236 NCREAEEEGVFILHGNRGVYHDDK 259
Cdd:cd00505   223 NCFKAFVKNAKVIHFNGPTKPWNK 246
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
3-230 1.39e-22

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 95.43  E-value: 1.39e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   3 LAVVACGDR--LEETVTMLKSALIFSI-KPLHVHIFAeDQLHDSFKDRLDSwsFLQRFNYSLYPITFPSD--SAMEWKKL 77
Cdd:COG1442     6 INIVFAIDDnyLPGLGVSIASLLENNPdRPYDFHILT-DGLSDENKERLEA--LAAKYNVSIEFIDVDDEllKDLPVSKH 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  78 FKPCASQRLFLPLIL-KGVDSLLYVDTDVLFLRPVDDIWSLleRFNStQIAAMAPEHEEPRVGWYNR-----FARHPYYg 151
Cdd:COG1442    83 ISKATYYRLLIPELLpDDYDKVLYLDADTLVLGDLSELWDI--DLGG-NLLAAVRDGTVTGSQKKRAkrlglPDDDGYF- 158
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958788865 152 rtgvNSGVMLMNMTRMRRKYFKNDMttarlqwgdilMPLLKKYKLNITWGDQDLLNIMFYHNPESLfvfPCQWNYRPDH 230
Cdd:COG1442   159 ----NSGVLLINLKKWREENITEKA-----------LEFLKENPDKLKYPDQDILNIVLGGKVKFL---PPRYNYQYSL 219
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
17-230 1.66e-20

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 88.81  E-value: 1.66e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  17 TMLKSALIF-SIKPLHVHIFAEDQLHDSFKdRLDSwsFLQRFNYSLYPITFPSDsamewKKLFKPCASQ--------RLF 87
Cdd:cd04194    17 VTIKSILANnSKRDYDFYILNDDISEENKK-KLKE--LLKKYNSSIEFIKIDND-----DFKFFPATTDhisyatyyRLL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  88 LPLILKGVDSLLYVDTDVLFLRPVDDIWSL-LErfnsTQIAAMAPEHEEPRVgWYNRFARHPYYGRTGVNSGVMLMNMTR 166
Cdd:cd04194    89 IPDLLPDYDKVLYLDADIIVLGDLSELFDIdLG----DNLLAAVRDPFIEQE-KKRKRRLGGYDDGSYFNSGVLLINLKK 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958788865 167 MRRKYFKNDmttarlqwgdiLMPLLKKYKLNITWGDQDLLNIMFYHNPESLfvfPCQWNYRPDH 230
Cdd:cd04194   164 WREENITEK-----------LLELIKEYGGRLIYPDQDILNAVLKDKILYL---PPRYNFQTGF 213
GT8_LARGE_C cd06431
LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in ...
1-251 3.67e-17

LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis; The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil motif, and two putative catalytic domains. This catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis.


Pssm-ID: 133053  Cd Length: 280  Bit Score: 80.21  E-value: 3.67e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   1 MHLAVVACG-DRLEETVTMLKSALIFSIKPLHVHIFAEDQLHDSFKDRLDSWSfLQRFNYSLYPITfPSDSAMEW---KK 76
Cdd:cd06431     1 IHVAIVCAGyNASRDVVTLVKSVLFYRRNPLHFHLITDEIARRILATLFQTWM-VPAVEVSFYNAE-ELKSRVSWipnKH 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  77 LFKPCASQRLFLPLILKGV-DSLLYVDTDVLFLRPVDDIWSLLERFNSTQIAAMApeheEPRVGWY--NRFARH---PYY 150
Cdd:cd06431    79 YSGIYGLMKLVLTEALPSDlEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLV----ENQSDWYlgNLWKNHrpwPAL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 151 GRtGVNSGVMLMNMTRMRRKYFkndMTTARLQWGDILMPLLKKyklniTWGDQDLLNIMFYHNPESLFVFPCQWNYR-PD 229
Cdd:cd06431   155 GR-GFNTGVILLDLDKLRKMKW---ESMWRLTAERELMSMLST-----SLADQDIFNAVIKQNPFLVYQLPCAWNVQlSD 225
                         250       260
                  ....*....|....*....|..
gi 1958788865 230 HCIYGSNCREAEEegVFILHGN 251
Cdd:cd06431   226 HTRSEQCYRDVSD--LKVIHWN 245
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
2-228 1.66e-06

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 48.47  E-value: 1.66e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865   2 HLAVVACGDRLEETVTMLKSALIF-SIKPLHVHIFaedqlHDSFK-DRLDSWSFLQRFNYSLYPITFPSDSAMEWKKLFK 79
Cdd:pfam01501   1 CIALALDKNYLLGASVSIKSLLKNnSDFALNFHIF-----TDDIPvENLDILNWLASSYKPVLPLLESDIKIFEYFSKLK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  80 PCASQ--------RLFLPLILKGVDSLLYVDTDVLFLRPVDDIWSLleRFNSTQIAAMapeheEPRVGWYNRFARHPYYG 151
Cdd:pfam01501  76 LRSPKywsllnylRLYLPDLFPKLDKILYLDADIVVQGDLSPLWDI--DLGGKVLAAV-----EDNYFQRYPNFSEPIIL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865 152 RTGV------NSGVMLMNMTR-MRRKYFKNDMTTARLQWGDILMPLlkkyklnitwGDQDLLNIMFYHNPESLfvfPCQW 224
Cdd:pfam01501 149 ENFGppacyfNAGMLLFDLDAwRKENITERYIKWLNLNENRTLWKL----------GDQDPLNIVFYGKVKPL---DPRW 215

                  ....
gi 1958788865 225 NYRP 228
Cdd:pfam01501 216 NVLG 219
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
96-228 1.50e-04

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 42.63  E-value: 1.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788865  96 DSLLYVDTDVLFLRPVDDIWSLLErfnstQIAAMapeheePRVGWYNRFarhpyygrtgvNSGVMLmnmtrmrrkyFKND 175
Cdd:cd02537    91 DKVVFLDADTLVLRNIDELFDLPG-----EFAAA------PDCGWPDLF-----------NSGVFV----------LKPS 138
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1958788865 176 MTTARLqwgdilmpLLKKYKLNITW--GDQDLLNiMFYHNPESLFVFPCQWNYRP 228
Cdd:cd02537   139 EETFND--------LLDALQDTPSFdgGDQGLLN-SYFSDRGIWKRLPFTYNALK 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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