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Conserved domains on  [gi|1843888589|ref|XP_034483197|]
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pollen-specific leucine-rich repeat extensin-like protein 2 [Drosophila innubila]

Protein Classification

DUF4794 domain-containing protein( domain architecture ID 11240457)

DUF4794 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4794 pfam16042
Domain of unknown function (DUF4794); This presumed domain is functionally uncharacterized. ...
 38-121 6.50e-18

Domain of unknown function (DUF4794); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is typically between 74 and 92 amino acids in length.


:

Pssm-ID: 435094 [Multi-domain]  Cd Length: 76  Bit Score: 76.07  E-value: 6.50e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843888589  38 AAPYPPAGLTPDPPFELPTEQEANFPQPDLTYGPPEEQpelTYGPPEEEpelIYGPPDEVYGPPDDTYGPPAVEdlPDQT 117
Cdd:pfam16042   1 SAPYPPAGWKPSVPFNLPTEEAATFPQPQSTYLPPDED---TYGPPEEE---ELPTPKEVYGPPDNTYGPPAYY--PANT 72


                  ....
gi 1843888589 118 YGPP 121
Cdd:pfam16042  73 YGPP 76
 
Name Accession Description Interval E-value
DUF4794 pfam16042
Domain of unknown function (DUF4794); This presumed domain is functionally uncharacterized. ...
 38-121 6.50e-18

Domain of unknown function (DUF4794); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is typically between 74 and 92 amino acids in length.


Pssm-ID: 435094 [Multi-domain]  Cd Length: 76  Bit Score: 76.07  E-value: 6.50e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843888589  38 AAPYPPAGLTPDPPFELPTEQEANFPQPDLTYGPPEEQpelTYGPPEEEpelIYGPPDEVYGPPDDTYGPPAVEdlPDQT 117
Cdd:pfam16042   1 SAPYPPAGWKPSVPFNLPTEEAATFPQPQSTYLPPDED---TYGPPEEE---ELPTPKEVYGPPDNTYGPPAYY--PANT 72


                  ....
gi 1843888589 118 YGPP 121
Cdd:pfam16042  73 YGPP 76
 
Name Accession Description Interval E-value
DUF4794 pfam16042
Domain of unknown function (DUF4794); This presumed domain is functionally uncharacterized. ...
 38-121 6.50e-18

Domain of unknown function (DUF4794); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is typically between 74 and 92 amino acids in length.


Pssm-ID: 435094 [Multi-domain]  Cd Length: 76  Bit Score: 76.07  E-value: 6.50e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843888589  38 AAPYPPAGLTPDPPFELPTEQEANFPQPDLTYGPPEEQpelTYGPPEEEpelIYGPPDEVYGPPDDTYGPPAVEdlPDQT 117
Cdd:pfam16042   1 SAPYPPAGWKPSVPFNLPTEEAATFPQPQSTYLPPDED---TYGPPEEE---ELPTPKEVYGPPDNTYGPPAYY--PANT 72


                  ....
gi 1843888589 118 YGPP 121
Cdd:pfam16042  73 YGPP 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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