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Conserved domains on  [gi|1835244964|ref|XP_033716317|]
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LOW QUALITY PROTEIN: olfactory receptor 6B2 [Tursiops truncatus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
51-301 2.06e-110

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15224:

Pssm-ID: 475119  Cd Length: 270  Bit Score: 321.54  E-value: 2.06e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  51 AASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGR 130
Cdd:cd15224     9 IAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTEC 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 131 VLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DF 201
Cdd:cd15224    89 VLLAVMAYDRYVAIchplrypviMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDM 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 202 STTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNK 279
Cdd:cd15224   169 SLAELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHltVVIIFYSATLFMYARPKAISSFDSNK 248
                         250       260
                  ....*....|....*....|..
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRN 301
Cdd:cd15224   249 LVSVLYTVVTPLLNPIIYCLRN 270
 
Name Accession Description Interval E-value
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
51-301 2.06e-110

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 321.54  E-value: 2.06e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  51 AASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGR 130
Cdd:cd15224     9 IAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTEC 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 131 VLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DF 201
Cdd:cd15224    89 VLLAVMAYDRYVAIchplrypviMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDM 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 202 STTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNK 279
Cdd:cd15224   169 SLAELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHltVVIIFYSATLFMYARPKAISSFDSNK 248
                         250       260
                  ....*....|....*....|..
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRN 301
Cdd:cd15224   249 LVSVLYTVVTPLLNPIIYCLRN 270
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
54-312 2.76e-27

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 107.59  E-value: 2.76e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL-CVFSFLVCTGRVL 132
Cdd:pfam13853   6 LIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMfFIHKFSIMESAVL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 133 LAsMACDGYQAIMT---------------MGLCVQLVAFAFVSGFIISVIKVysssstTFCGSNVLKHIFCDISPIPKLA 197
Cdd:pfam13853  86 LA-MAVDRFVAICSplryttiltnpvisrIGLGVSVRSFILVLPLPFLLRRL------PFCGHHVLSHSYCLHMGLARLS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 198 C*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMD-- 273
Cdd:pfam13853 159 CADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHvcAVLAFYTPMIGLSMVHRFGHnv 238
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1835244964 274 SRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKKAL 312
Cdd:pfam13853 239 PPLLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
 
Name Accession Description Interval E-value
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
51-301 2.06e-110

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 321.54  E-value: 2.06e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  51 AASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGR 130
Cdd:cd15224     9 IAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTEC 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 131 VLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DF 201
Cdd:cd15224    89 VLLAVMAYDRYVAIchplrypviMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDM 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 202 STTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNK 279
Cdd:cd15224   169 SLAELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHltVVIIFYSATLFMYARPKAISSFDSNK 248
                         250       260
                  ....*....|....*....|..
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRN 301
Cdd:cd15224   249 LVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
54-308 2.09e-87

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 263.16  E-value: 2.09e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15225    12 LVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15225    92 AAMAYDRYVAIcnplrytliMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACADTSLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15225   172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHliVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15225   252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
54-301 1.16e-86

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 260.88  E-value: 1.16e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd13954    12 LLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd13954    92 AVMAYDRYVAIchplhyptiMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPLLKLSCSDTSLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd13954   172 ELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHltVVSLFYGTIIFMYVRPSSSYSSDLDKVVS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd13954   252 VFYTVVTPMLNPIIYSLRN 270
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
54-301 9.34e-81

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 245.86  E-value: 9.34e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15911    12 IVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15911    92 AVMSYDRYLAIckplhyaslMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLSCSDTSLV 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15911   172 ELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHliVVTIFYGTLIIVYVVPSTNTSRDLNKVFS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15911   252 LFYTVLTPLVNPLIYSLRN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
54-310 1.69e-80

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 245.63  E-value: 1.69e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15417    12 LVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15417    92 AAMAYDRYVAIcnpllysviMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLSCSDTFIS 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15417   172 QVVLFLVAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHltAVTLFYGTGLFVYLRPSSSHSQDQDKVAS 251
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15417   252 VFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
54-301 1.06e-79

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 243.18  E-value: 1.06e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15230    12 LITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15230    92 AAMAYDRYVAIcnpllytviMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKLSCSDTHIN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15230   172 ELVLFAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHltAVSLFYGTLIFMYLRPSSSYSLDQDKVVS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15230   252 VFYTVVIPMLNPLIYSLRN 270
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
60-301 3.66e-73

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 226.60  E-value: 3.66e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  60 NLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASMACD 139
Cdd:cd15912    18 NLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFLLAVMSFD 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 140 GYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELVGFV 210
Cdd:cd15912    98 RYVAIcnplhyptiMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLSCSDTRLIELLDFI 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 211 LTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAVYTVL 288
Cdd:cd15912   178 LASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHltVVSIFYGSCIFMYVRPSQSSSLDLNKVVALLNTVV 257
                         250
                  ....*....|...
gi 1835244964 289 TPVINPLIYCLRN 301
Cdd:cd15912   258 TPLLNPFIYTLRN 270
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
41-312 8.57e-73

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 226.48  E-value: 8.57e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  41 FVLVGFLTAP--AASLFV---------LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGR 109
Cdd:cd15943     2 FILLGLTDNPelQVILFAvflviylitLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENKT 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 110 ISFVGCMTQLCVFSFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGS 180
Cdd:cd15943    82 ISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAIcnpllytviMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCGS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 181 NVLKHIFCDISPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTF 258
Cdd:cd15943   162 NVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHlmAVTIF 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1835244964 259 YMALIFMYVWPQAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKKAL 312
Cdd:cd15943   242 YGTTLFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
46-310 5.63e-72

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 223.82  E-value: 5.63e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFL 125
Cdd:cd15409     4 FLVFLAIYLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 126 VCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKL 196
Cdd:cd15409    84 ATTECFLLAAMAYDRYVAIcnpllypvvMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKI 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 197 AC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDS 274
Cdd:cd15409   164 SCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHllSVSLFYGSLFFMYVRPSSLYA 243
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1835244964 275 RSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15409   244 LDQDMMDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
41-308 2.27e-70

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 219.83  E-value: 2.27e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  41 FVLVGFLTApaaSLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLC 120
Cdd:cd15231     2 LLFLIFLII---YLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 121 VFSFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDIS 191
Cdd:cd15231    79 FFVSFVGTECLLLAVMAYDRYVAIcnplhyaviMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 192 PIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWP 269
Cdd:cd15231   159 PLLKLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHltVVTLFYGTAIFNYNRP 238
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1835244964 270 QAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15231   239 SSGYSLDKDTLISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
41-305 2.42e-70

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 219.89  E-value: 2.42e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  41 FVLVGFLTAPA--ASLFV---------LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGR 109
Cdd:cd15408     1 FILLGFTDQPElqVLLFVvflliyvitLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 110 ISFVGCMTQLCVFSFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGS 180
Cdd:cd15408    81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAIcnpllytviMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 181 NVLKHIFCDISPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTF 258
Cdd:cd15408   161 NVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHltAVTLF 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1835244964 259 YMALIFMYVWPQAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFK 305
Cdd:cd15408   241 YGSLAFMYLRPSSRYSLDLDKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
41-312 3.16e-69

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 217.53  E-value: 3.16e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  41 FVLVGFLTAP--AASLFV---------LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGR 109
Cdd:cd15410     1 FILLGFTDYPelQVPLFLvflaiygitLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 110 ISFVGCMTQLCVFSFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGS 180
Cdd:cd15410    81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAIcnpllytviMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 181 NVLKHIFCDISPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTF 258
Cdd:cd15410   161 NVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHltAITIF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1835244964 259 YMALIFMYVWPQAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKKAL 312
Cdd:cd15410   241 HGTILFMYCRPSSSYSLDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
54-310 2.10e-68

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 214.87  E-value: 2.10e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15411    12 VITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15411    92 GLMAYDRYVAIcnpllytvvMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLLKLSCSDTHVN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15411   172 EMLIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHltAVTIFYGTGIFTYLRPSSSYSLGQDKVAS 251
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15411   252 VFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
54-301 3.99e-68

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 213.68  E-value: 3.99e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15237    12 LLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15237    92 AVMAYDRYVAIcnplrysviMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACADTSLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15237   172 EAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHltVVTLFYGTAIFMYMRPHSTHSPDQDKMIS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15237   252 VFYTIVTPMLNPLIYSLRN 270
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
56-310 2.16e-67

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 212.17  E-value: 2.16e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  56 VLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLAS 135
Cdd:cd15419    14 TVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFLLAA 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 136 MACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTEL 206
Cdd:cd15419    94 MAYDRFIAIcnpllypviMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPLLKLSCSDTFINEL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 207 VGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAV 284
Cdd:cd15419   174 VMFVLCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHltAVSLFYGTVFFMYAQPGAVSSPEQSKVVSVF 253
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 285 YTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15419   254 YTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
54-310 7.68e-66

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 208.37  E-value: 7.68e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15416    12 SVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15416    92 AAMAYDRYVAIcnpllystiMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLSCSDIRLA 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15416   172 KILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHltAVTLFYGTITFIYVMPNSSYSMDQNKVVS 251
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15416   252 VFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
57-301 1.39e-65

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 207.08  E-value: 1.39e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASM 136
Cdd:cd15431    15 LLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECLLLAVM 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 137 ACDGYQA---------IMTMGLCVQLVAFAFVSGFIISVIKVYsSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELV 207
Cdd:cd15431    95 AYDRFVAicnplrytlIMSWRVCIQLAAGSWVSAFLLTVIPVL-TMPLHFCGPNVINHFFCEVQALLKLACSDTSLNEIL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 208 GFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAVY 285
Cdd:cd15431   174 MFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHltVVTIFYGTAIFMYLRPQSKSSSDQDKIISVFY 253
                         250
                  ....*....|....*.
gi 1835244964 286 TVLTPVINPLIYCLRN 301
Cdd:cd15431   254 GVVTPMLNPLIYSLRN 269
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
40-308 9.06e-65

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 205.48  E-value: 9.06e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  40 AFVLVGFLTApaaslfvLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL 119
Cdd:cd15421     5 SLILLIFLVA-------LTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQI 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 120 CVFSFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDI 190
Cdd:cd15421    78 FFFLTLGGAECLLLALMAYDRYVAIchplrypvlMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 191 SPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVW 268
Cdd:cd15421   158 PALLKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHltVVSLYYGPAIFTYMR 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1835244964 269 PQAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15421   238 PGSYHSPEQDKVVSVFYTILTPMLNPLIYSLRNKEVLGAL 277
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
54-312 9.61e-65

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 205.74  E-value: 9.61e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15414    12 LITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15414    92 ASMAYDRYVAIcnpllytviMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPLLSLSCADTQIN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15414   172 KWVLFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHltAVSILYGTLFFIYVRPSSSSSLDLDKVVS 251
                         250       260       270
                  ....*....|....*....|....*....|
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDALKKAL 312
Cdd:cd15414   252 VFYTAVIPMLNPLIYSLRNKEVKDALRRTI 281
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
54-301 4.80e-62

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 198.31  E-value: 4.80e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15913    12 ILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFFL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15913    92 SVMAFDRYLAIcrplhyptiMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPLLALSCVPAPGT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15913   172 ELICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHlaVVSLFYGSVMVMYVSPGSGNSTGMQKIVT 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15913   252 LFYSVVTPLLNPLIYSLRN 270
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
57-310 6.39e-62

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 198.02  E-value: 6.39e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASM 136
Cdd:cd15415    15 LLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFLLAVM 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 137 ACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELV 207
Cdd:cd15415    95 AYDRYVAIcnpllytvaMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLSCSDTHINELL 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 208 GFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAVY 285
Cdd:cd15415   175 LLTFSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHltAVTLFYGSVSFSYIQPSSQYSLEQEKVSAVFY 254
                         250       260
                  ....*....|....*....|....*
gi 1835244964 286 TVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15415   255 TLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
54-301 7.23e-62

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 197.68  E-value: 7.23e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15227    12 LAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELALL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15227    92 TVMAYDRYVAIchplhyeviMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLKLSCSDTYLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15227   172 EIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHliVVSLFLSTGSFAYLKPPSDSPSLLDLLLS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15227   252 VFYSVVPPTLNPIIYSLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
51-310 7.68e-62

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 198.01  E-value: 7.68e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  51 AASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGR 130
Cdd:cd15412     9 VIYLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEY 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 131 VLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DF 201
Cdd:cd15412    89 YMLAVMAYDRYMAIcnpllysvkMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLSCSDT 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 202 STTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNK 279
Cdd:cd15412   169 YVKETAMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHltAVTIFYGTLFCMYLRPPSEESVEQSK 248
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15412   249 IVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
57-308 1.09e-61

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 197.44  E-value: 1.09e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASM 136
Cdd:cd15235    16 LLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFLLAVM 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 137 ACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELV 207
Cdd:cd15235    96 AYDRYVAIchplhyatvMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCSDTSLNELL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 208 GFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAVY 285
Cdd:cd15235   176 IFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHltVVALFYGTIIGVYFQPSSSYSADKDRVATVMY 255
                         250       260
                  ....*....|....*....|...
gi 1835244964 286 TVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15235   256 TVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
54-308 1.43e-61

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 197.05  E-value: 1.43e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15229    12 LLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15229    92 SAMAYDRYAAIchplhyvqiMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPLSCSDTFAN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVgfVLTFSILVF--PLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKL 280
Cdd:cd15229   172 KMV--LLTSSVIFGlgSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHltVVGLFYGTGFFRYLRPNSASSSVLDRV 249
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 281 ISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15229   250 FSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
43-310 7.62e-61

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 195.73  E-value: 7.62e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  43 LVGFLTAPAASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVF 122
Cdd:cd15945    14 VTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKSIPFYGCALQMFFF 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 123 SFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPI 193
Cdd:cd15945    94 AAFADAECLLLAVMAYDRYVAIcnpllyttaMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGSNTINHFFCDIPPL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 194 PKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQA 271
Cdd:cd15945   174 LALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHltAVGLFYGTLLFMYLRPSS 253
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1835244964 272 MDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15945   254 SYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
54-301 1.89e-60

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 193.98  E-value: 1.89e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15918    12 LVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15918    92 AVMAYDRYVAIchplhyttiMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSCSDTHLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15918   172 ELVILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHlsVVSLFYGTVIGVYLSPPSSHSASKDSVAA 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15918   252 VMYTVVTPMLNPFIYSLRN 270
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
54-310 4.06e-60

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 193.69  E-value: 4.06e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15413    12 LTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15413    92 SAMAYDRYVAIcnpllytviMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSCSDTHEK 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15413   172 ELIILIFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHltVVTIFYGTLIFMYLQPKSSHSLDTDKMAS 251
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15413   252 VFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
54-308 6.57e-60

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 193.03  E-value: 6.57e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15424    12 LLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15424    92 GAMAYDRYLAIchpllyaaaMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLACADTHIT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15424   172 EAIVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHlaVVTLFYGTVISMYMRPRSGSTPDRDKQIA 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15424   252 VFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
38-308 9.76e-60

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 192.62  E-value: 9.76e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  38 VGAFVLvgFLtapAASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMT 117
Cdd:cd15429     1 LGLFVL--FL---VMYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 118 QLCVFSFLVCTGRVLLASMACDGYQA---------IMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFC 188
Cdd:cd15429    76 QLFISLALGGTEFILLAVMAYDRYVAvchplrytvIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSC 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 189 DISPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMY 266
Cdd:cd15429   156 ELLAVVRLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHltVVSLCYGTAIFTY 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1835244964 267 VWPQAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15429   236 MRPRSGSSALQEKMISLFYAVVTPMLNPLIYSLRNKEVKGAL 277
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
54-301 1.44e-59

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 191.68  E-value: 1.44e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15947    12 LLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQA---------IMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15947    92 AVMAFDRYVAvcrplhytvIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIKLACVDTTFN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15947   172 ELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHllVVSLFYGTAIYMYLQPPSSYSQDQGKFIS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15947   252 LFYTVVTPTLNPLIYTLRN 270
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
54-301 2.43e-59

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 191.37  E-value: 2.43e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15915    12 LASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAMLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15915    92 AVMAYDRYVAIcnplrytviMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLACGDTSLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHI-TLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLI 281
Cdd:cd15915   172 LWLLNIVTGSIALGTFILTLLSYIYIiSFLLLKVRSKEGRHKAFSTCASHltVVLLLYGPALFTYIRPSSGDSLEQDRIV 251
                         250       260
                  ....*....|....*....|
gi 1835244964 282 SAVYTVLTPVINPLIYCLRN 301
Cdd:cd15915   252 ALLYTVVTPVLNPLIYTLRN 271
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
58-312 3.72e-59

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 191.43  E-value: 3.72e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  58 VENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASMA 137
Cdd:cd15406    25 VGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECYMLTAMA 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 138 CDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELVG 208
Cdd:cd15406   105 YDRYVAIcnpllynvtMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVINHYFCDILPLLKLSCSSTYINELLL 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 209 FVL-TFSILVfPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAVY 285
Cdd:cd15406   185 FIVgGFNVLA-TTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHlaAVGVFYGSIIFMYLKPSSSSSMTQEKVSSVFY 263
                         250       260
                  ....*....|....*....|....*..
gi 1835244964 286 TVLTPVINPLIYCLRNKEFKDALKKAL 312
Cdd:cd15406   264 TTVIPMLNPLIYSLRNKDVKNALKKVL 290
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
55-308 9.78e-58

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 187.15  E-value: 9.78e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  55 FVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLA 134
Cdd:cd15420    13 FTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVLLA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 135 SMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTE 205
Cdd:cd15420    93 VMSYDRYVAIchplrytviMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLACADTWINE 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 206 LVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISA 283
Cdd:cd15420   173 ILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHlcVVGLFYGTAMFMYMVPGSSNSAEQEKILSL 252
                         250       260
                  ....*....|....*....|....*
gi 1835244964 284 VYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15420   253 FYSLFNPMLNPLIYSLRNKQVKGAL 277
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
54-301 1.28e-57

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 186.81  E-value: 1.28e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15914    12 LFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15914    92 TAMAYDRYLAIcnplhypsiMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLLSLACTDTSLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15914   172 VLVDFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHltVVLLFFGSVSFMYLRLSKSYSLDYDRAIA 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15914   252 VVYAVLTPFFNPIIYSLRN 270
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
57-301 1.61e-57

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 186.69  E-value: 1.61e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASM 136
Cdd:cd15232    15 LTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLLLTAM 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 137 ACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELV 207
Cdd:cd15232    95 AYDRYVAIchplhystiMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLSCSDTSLNEIM 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 208 GFV--LTFSILVFPLvaTMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISA 283
Cdd:cd15232   175 AFVadVFFGVGNFLL--TLTSYGFIIRSILRIRSTEGKKKAFSTCSSHliVVSLYYSTVIYTYIRPSSSYSPEKDKVVAV 252
                         250
                  ....*....|....*...
gi 1835244964 284 VYTVLTPVINPLIYCLRN 301
Cdd:cd15232   253 LYSVVTPTLNPLIYSLRN 270
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
54-301 2.25e-57

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 186.04  E-value: 2.25e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15430    12 LVILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15430    92 AVMAYDRYVAIcnplrypiiMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLACVDISLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15430   172 EIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHltVVIIFYGTILFMYMKPKSKNAQISDKLIT 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15430   252 LFYGVVTPMLNPIIYSLRN 270
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
54-310 3.04e-57

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 186.09  E-value: 3.04e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15407    12 LITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQA---------IMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15407    92 ASMAYDRHAAvckplhyttTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVLALSCSDIHIS 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15407   172 EIVLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHltAVSIFYGTVIFMYLQPSSSHSMDTDKMAS 251
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15407   252 VFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
54-311 7.16e-56

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 182.67  E-value: 7.16e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15418    13 ILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFLL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15418    93 AAMAYDRYVAIcnpllyssaMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACDDTRVY 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELV-GFVLTFSILVfPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLI 281
Cdd:cd15418   173 ELIlYFILGFNVIA-PTALILASYTFILAAILRIHSASGRHKAFSTCSAHltSVTLYYGSILFIYSRPSSSHTPDRDKVV 251
                         250       260       270
                  ....*....|....*....|....*....|
gi 1835244964 282 SAVYTVLTPVINPLIYCLRNKEFKDALKKA 311
Cdd:cd15418   252 ALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
54-308 1.12e-55

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 182.19  E-value: 1.12e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15434    12 LLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15434    92 AVMAYDRYAAVcqplhytvvMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALIKLACVDTTAY 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15434   172 EATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHltVVSLFYGTIIYMYLQPKNSVSQDQGKFLT 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15434   252 LFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
54-308 3.89e-55

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 180.72  E-value: 3.89e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGR-ISFVGCMTQLCVFSFLVCTGRVL 132
Cdd:cd15916    12 LLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPGGKvISFGGCVAQLYFFHFLGSTECFL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 133 LASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFST 203
Cdd:cd15916    92 YTLMAYDRYLAIchplhyptiMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLACADTTI 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 204 TELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDsrSSNKLI 281
Cdd:cd15916   172 NELVIFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHliVVLCFYVPCVFIYLRPGSKE--ALDGVI 249
                         250       260
                  ....*....|....*....|....*..
gi 1835244964 282 SAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15916   250 AVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
41-310 7.63e-54

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 178.05  E-value: 7.63e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  41 FVLVGFLTAPAAS--LFV---------LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGR 109
Cdd:cd15944     1 FILLGFTQDPQMQiiLFVvfliiylvnVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 110 ISFVGCMTQLCVFSFLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGS 180
Cdd:cd15944    81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAIcnpllystlMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 181 NVLKHIFCDISPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTF 258
Cdd:cd15944   161 NIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHftGVTLF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835244964 259 YMALIFMYVWPQAMDSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKK 310
Cdd:cd15944   241 YGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKK 292
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
46-308 5.73e-52

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 172.66  E-value: 5.73e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFL 125
Cdd:cd15428     4 FILFLIIYLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 126 VCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKL 196
Cdd:cd15428    84 GITECALLSVMSYDRYVAIclplrysliMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 197 AC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDS 274
Cdd:cd15428   164 ASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHlmVVSLFYGSVLSTYMRPKSSTS 243
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1835244964 275 RSSNKLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15428   244 KEYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
54-301 4.59e-51

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 169.70  E-value: 4.59e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15939    12 LATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DfstT 204
Cdd:cd15939    92 TVMAYDRYVAIckplhyttiMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLACTD---T 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVG----------FVLTFSILVFplvatmlSYGHItLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPqaM 272
Cdd:cd15939   169 YVIGllvvansgliCLLSFLILLI-------SYIVI-LYSLRTHSSEGRRKALSTCGSHitVVVLFFVPCIFIYMRP--V 238
                         250       260
                  ....*....|....*....|....*....
gi 1835244964 273 DSRSSNKLISAVYTVLTPVINPLIYCLRN 301
Cdd:cd15939   239 TTFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
54-301 9.29e-51

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 169.20  E-value: 9.29e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15946    12 LSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTLF 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15946    92 SVMAYDRYVAIchplrykviMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKLACADTSLN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15946   172 EMVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHitVVTMFYGPAMFMYMRPGSNYSPERDKKIS 251
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15946   252 LFYNVFTALLNPVIYSLRN 270
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
56-301 1.29e-50

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 168.54  E-value: 1.29e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  56 VLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLAS 135
Cdd:cd15226    14 TVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVLLIA 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 136 MACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTEL 206
Cdd:cd15226    94 MAFDRYVAIckplhyltiMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIKLACTDTYVLEL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 207 VGFVLTFSILVFPLVATMLSYGHITLAVpRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPqaMDSRSSNKLISAV 284
Cdd:cd15226   174 MVVANSGLISLVCFLLLLISYIVILVTV-RKHSSGGSSKALSTCSAHitVVVLFFGPCIFIYVWP--FSTFPVDKFLAVF 250
                         250
                  ....*....|....*..
gi 1835244964 285 YTVLTPVINPLIYCLRN 301
Cdd:cd15226   251 YTVITPLLNPIIYTLRN 267
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
54-308 1.90e-50

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 168.52  E-value: 1.90e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15234    12 LVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACD---------GYQAIMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15234    92 AVMAYDryvaichplHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACSDTLIN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15234   172 NILIYLATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHlsVVSLFYGTGLGVYISSAVTHSSRKTAVAS 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15234   252 VMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
44-308 1.72e-48

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 163.43  E-value: 1.72e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  44 VGFLTAPAASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFS 123
Cdd:cd15233     2 VLFVTFLLAYIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFH 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 124 FLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIP 194
Cdd:cd15233    82 LLAGADCFLLTAMAYDRYLAIcqpltysvrMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPLF 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 195 KLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAM 272
Cdd:cd15233   162 QLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHltVVCIFYGTGVFSYMRLGSV 241
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1835244964 273 DSRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15233   242 YSSDKDKVIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
54-308 2.00e-48

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 163.42  E-value: 2.00e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15432    12 ILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15432    92 AVMAFDRFAAIcqplhysviMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCVDTTAN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15432   172 EAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHllVVSLFYGTAISMYLQPPSNSSHDRGKMVA 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15432   252 LFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
46-308 2.58e-47

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 160.29  E-value: 2.58e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFL 125
Cdd:cd15228     4 FVLFLAFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 126 VCTGRVLLASMACDGYQA---------IMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKL 196
Cdd:cd15228    84 GSTECLLYTVMAYDRYVAichplryllIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLKL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 197 AC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQamds 274
Cdd:cd15228   164 ACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHltVVTLFFGPCALIYTQPT---- 239
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1835244964 275 rSSNKLISAVY---TVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15228   240 -PSPVLVTPVQifnNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
60-308 5.00e-47

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 159.55  E-value: 5.00e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  60 NLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASMACD 139
Cdd:cd15236    18 NLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLLAVMAYD 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 140 ---------GYQAIMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELVGFV 210
Cdd:cd15236    98 ryvaichplHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKLSCSSTSLNELVIFT 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 211 LTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLISAVYTVL 288
Cdd:cd15236   178 EGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHlsVVFLYYGTIIGVYFFPSSNNSSDKDIVASVMYTVV 257
                         250       260
                  ....*....|....*....|
gi 1835244964 289 TPVINPLIYCLRNKEFKDAL 308
Cdd:cd15236   258 TPMLNPFIYSLRNRDIKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
46-308 6.81e-47

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 159.38  E-value: 6.81e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFV--LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFS 123
Cdd:cd15223     2 WLSLPFLLLYLvaLVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIH 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 124 FLVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIP 194
Cdd:cd15223    82 FFTAMESSILLVMALDRYVAIckplrypsiITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 195 KLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASHTVT--TFYMALIFMYVWPQAM 272
Cdd:cd15223   162 SLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVilFFYTAVLVSSLTYRFG 241
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1835244964 273 DSRSS--NKLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15223   242 KTIPPdvHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
54-308 1.55e-46

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 158.35  E-value: 1.55e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15405    12 VVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYVL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15405    92 TAMAYDRYVAIcnpllytvtMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLLQLSCTSTYVN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15405   172 ELVVFVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHiiAVSLFFGSGAFMYLKPSSVGSVNQGKVSS 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15405   252 VFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
40-308 3.48e-46

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 157.59  E-value: 3.48e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  40 AFVLVGFLTapaaslfvLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL 119
Cdd:cd15942     6 FFLVVYLLT--------LSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 120 CVFSFLVCTGRVLLASMACD---------GYQAIMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDI 190
Cdd:cd15942    78 FFFHFLGCAECFLYTVMAYDrflaickplHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 191 SPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVW 268
Cdd:cd15942   158 PAMLKLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHltVVVIYYVPLTFIYLR 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1835244964 269 PQAMDSRSSnkLISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15942   238 PGSQDPLDG--VVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
54-308 8.67e-45

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 153.79  E-value: 8.67e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15433    12 LLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQA---------IMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15433    92 AVMAFDRYAAvcrplhyaaLMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACGDDETT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDSRSSNKLIS 282
Cdd:cd15433   172 EVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHlmVVFLFYGSAIYTYLQPIHRYSQAHGKFVS 251
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 283 AVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15433   252 LFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
54-301 1.27e-44

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 152.98  E-value: 1.27e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15940    12 LLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15940    92 TIMAYDRYVAIcnplhyptvMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACTDTYLI 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVpRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAmdSRSSNKLIS 282
Cdd:cd15940   172 DILIVSNSGLISLVCFVALLGSYIVILVSL-RKRSTEGRRKALSTCASHltVVTLFFGPCIFIYTRPST--SFSEDKVVS 248
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15940   249 VFYTVVTPLLNPIIYTLRN 267
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
60-301 1.55e-43

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 150.18  E-value: 1.55e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  60 NLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLASMACD 139
Cdd:cd15936    18 NLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFLLSVMAYD 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 140 GYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTELV--- 207
Cdd:cd15936    98 RYIAIhkplhyltiMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACTDTFLLELLmvs 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 208 --GFVLTFSILVFplvatMLSYGhITLAVPRVPSATAV*RAFSTRASHTVTtfyMALIF---MYVWPQAMDSRSSNKLIS 282
Cdd:cd15936   178 nsGLVTLLIFFIL-----LISYT-VILVKIRTHVTEGKRKALSTCASQITV---VTLIFvpcIYIYARPFQTFPMDKAVS 248
                         250
                  ....*....|....*....
gi 1835244964 283 AVYTVLTPVINPLIYCLRN 301
Cdd:cd15936   249 VLYTVITPMLNPMIYTLRN 267
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
54-301 8.34e-43

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 148.35  E-value: 8.34e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15937    12 LIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15937    92 VAMAYDRYVAIckplhyttvVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLACTNTYTV 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHItLAVPRVPSATAV*RAFSTRASHTVTTFYMALIFMYVWPQAMDSRSSNKLISAV 284
Cdd:cd15937   172 ELLMFSNSGLVILLCFLLLLISYAFL-LAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFPMDKVVAVF 250
                         250
                  ....*....|....*..
gi 1835244964 285 YTVLTPVINPLIYCLRN 301
Cdd:cd15937   251 HTVIFPLLNPMIYTLRN 267
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
54-308 1.35e-38

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 137.67  E-value: 1.35e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHR-PMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGR-ISFVGCMTQLCVFSFLVCTGRV 131
Cdd:cd15941    12 LLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSGRtISFEGCVVQLYAFHFLASTECF 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 132 LLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFS 202
Cdd:cd15941    92 LYTVMAYDRYLAIchplhyptaMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLKLACADTT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 203 TTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAmdSRSSNKL 280
Cdd:cd15941   172 INELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHltGVLLYYVPSVFIYLQPSS--SQAGAGA 249
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 281 ISAVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd15941   250 PAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
56-301 1.03e-37

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 135.00  E-value: 1.03e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  56 VLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLLAS 135
Cdd:cd15938    14 VLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFLLTV 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 136 MACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTEL 206
Cdd:cd15938    94 MAYDRYVAIckplhyttiMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACTDTCVTEL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 207 VGFVLTFSILVFPLVATMLSYGHITLavpRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPqaMDSRSSNKLISAV 284
Cdd:cd15938   174 LMVSNSGLISTVCFVVLVTSYTTILV---TIRSTEGRRKALSTCASHlmVVTLFFGPCIFIYARP--FSTFPVDKHVSVL 248
                         250
                  ....*....|....*..
gi 1835244964 285 YTVLTPVINPLIYCLRN 301
Cdd:cd15938   249 YNVITPMLNPLIYTLRN 265
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
57-303 1.07e-35

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 130.10  E-value: 1.07e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL-CVFSFLVCTGRVLLAs 135
Cdd:cd15917    15 LLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMfFIHSFTAMESGVLLA- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 136 MACDGYQAI---------------MTMGLCVQLVAFAFVSGFIISVIKVysssstTFCGSNVLKHIFCDISPIPKLAC*D 200
Cdd:cd15917    94 MAFDRYVAIcyplryttiltntvvGKIGLAILLRAVALIIPLPLLVRRL------PYCGSNVISHSYCEHMAVVKLACGD 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 201 FSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYV--WPQAMDSRS 276
Cdd:cd15917   168 TRVNSIYGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHicVILIFYTPALFSFLthRFGHHVPPH 247
                         250       260
                  ....*....|....*....|....*..
gi 1835244964 277 SNKLISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15917   248 VHILLANLYLLLPPMLNPIVYGVRTKQ 274
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
46-301 9.02e-35

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 127.57  E-value: 9.02e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFVLVENLAVILTIWGSSSLHR-PMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSF 124
Cdd:cd15935     4 FVLVLACYAAILLGNLLIVVTVHADPHLLQsPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 125 LVCTGRVLLASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPK 195
Cdd:cd15935    84 LGGSEMLLLTLMAYDRYVAIchplrylavMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIK 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 196 LAC*DFSTTELVGFVLTFSILVFPLVATMLSYGhITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPqaMD 273
Cdd:cd15935   164 LACMDTYVVEVLMVANSGLLSLVCFLVLLVSYG-IILTTLRGRFREGGGKALSTCSSHltVVSLIFVPCIFVYLRP--FS 240
                         250       260
                  ....*....|....*....|....*...
gi 1835244964 274 SRSSNKLISAVYTVLTPVINPLIYCLRN 301
Cdd:cd15935   241 SSSVDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
54-303 1.01e-31

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 119.32  E-value: 1.01e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15221    12 IVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAIL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15221    92 LAMAFDRYVAIcyplryttiLTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLACADITVN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIF---MYVWPQAMdSRSSNK 279
Cdd:cd15221   172 IWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHvcVILMFYTPAFFsflTHRFGRHI-PRHVHI 250
                         250       260
                  ....*....|....*....|....
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15221   251 LLANLYVLVPPMLNPIVYGVKTKQ 274
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
54-303 1.10e-31

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 119.41  E-value: 1.10e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15952    12 LIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAVL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15952    92 VAMAFDRYVAIcnplryttiLTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLACASIRIN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGfVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMDS--RSSNKL 280
Cdd:cd15952   172 IIYG-LFAISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHvcVILAFYTPALFSFLTHRFGHNipRYIHIL 250
                         250       260
                  ....*....|....*....|...
gi 1835244964 281 ISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15952   251 LANLYVVLPPMLNPVIYGVRTKQ 273
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
57-303 6.25e-31

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 117.51  E-value: 6.25e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL-CVFSFLVCTGRVLLAs 135
Cdd:cd15950    15 LLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMfFVHSFTAVESGVLLA- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 136 MACD---------GYQAIMTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTEL 206
Cdd:cd15950    94 MAFDryvaichplRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLACADPRPSSL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 207 VGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFY---MALIFMYVWPQAMdSRSSNKLI 281
Cdd:cd15950   174 YSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHvcVILLFYipgLLSIYTQRFGQGV-PPHTQVLL 252
                         250       260
                  ....*....|....*....|..
gi 1835244964 282 SAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15950   253 ADLYLLVPPMLNPIIYGMRTKQ 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
57-303 5.52e-29

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 112.05  E-value: 5.52e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  57 LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVF-SFLVCTGRVLLAs 135
Cdd:cd15951    15 LLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIhSFSTMESGIFVA- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 136 MACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTTEL 206
Cdd:cd15951    94 MALDRYVAIcnplrhstiLTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLACADTRVSRA 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 207 VGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIF---MYVWPQAMDsRSSNKLI 281
Cdd:cd15951   174 YGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHicVILVFYIPALFsflTHRFGHNVP-PHVHILI 252
                         250       260
                  ....*....|....*....|..
gi 1835244964 282 SAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15951   253 ANVYLLVPPMLNPIIYGVRTKQ 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
54-312 2.76e-27

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 107.59  E-value: 2.76e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL-CVFSFLVCTGRVL 132
Cdd:pfam13853   6 LIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMfFIHKFSIMESAVL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 133 LAsMACDGYQAIMT---------------MGLCVQLVAFAFVSGFIISVIKVysssstTFCGSNVLKHIFCDISPIPKLA 197
Cdd:pfam13853  86 LA-MAVDRFVAICSplryttiltnpvisrIGLGVSVRSFILVLPLPFLLRRL------PFCGHHVLSHSYCLHMGLARLS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 198 C*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQAMD-- 273
Cdd:pfam13853 159 CADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHvcAVLAFYTPMIGLSMVHRFGHnv 238
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1835244964 274 SRSSNKLISAVYTVLTPVINPLIYCLRNKEFKDALKKAL 312
Cdd:pfam13853 239 PPLLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
54-304 8.77e-27

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 106.19  E-value: 8.77e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15953    12 IVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAVL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15953    92 VAMAFDRYVAIcnplryatiLTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVVKLACGDTTIN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIF---MYVWPQAMdSRSSNK 279
Cdd:cd15953   172 RIYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHicVILMSYTPALFsflTHRFGQGI-APHIHI 250
                         250       260
                  ....*....|....*....|....*
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRNKEF 304
Cdd:cd15953   251 ILANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
46-303 3.90e-26

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 104.56  E-value: 3.90e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFV--LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFS 123
Cdd:cd15956     2 WLSLPFCFIYVlsLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 124 FLVCTGRVLLASMACDGYQAI---------------MTMGLCVQLVAFAFVSGFIISVIKVysssstTFCGSNVLKHIFC 188
Cdd:cd15956    82 AFSAMESGVLVAMALDRFVAIcnplhyatiltlevvAKAGLLLALRGVAIVIPFPLLVCRL------SFCASHTIAHTYC 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 189 DISPIPKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMY 266
Cdd:cd15956   156 EHMAVVKLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHicVILFFYIPGLLSV 235
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1835244964 267 VWPQAMDS--RSSNKLISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15956   236 LMHRFGHSvpSAAHVLLSNLYLLLPPALNPIVYGIRTKQ 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
54-303 7.38e-25

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 101.04  E-value: 7.38e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQL-CVFSFLVCTGRVL 132
Cdd:cd15222    12 LVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMfFIHTFSFMESSVL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 133 LAsMACDGYQAI---------------MTMGLCVQLVAFAFVSGFIISVIKVYssssttFCGSNVLKHIFCDISPIPKLA 197
Cdd:cd15222    92 LA-MAFDRFVAIcnplryasiltnsriAKIGLAIVLRSVLLLLPLPFLLKRLP------FCHSNVLSHSYCLHQDVMKLA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 198 C*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALI---FMYVWPQAM 272
Cdd:cd15222   165 CSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHicAVLIFYVPMIglsMVHRFGKHA 244
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1835244964 273 dSRSSNKLISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15222   245 -SPLVHVLMANVYLLVPPVLNPIIYSVKTKQ 274
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
54-303 1.63e-22

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 94.89  E-value: 1.63e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15954    12 IIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGMESGVL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPIPKLAC*DFSTT 204
Cdd:cd15954    92 MLMALDRYVAIcyplryatiLTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLACANIRVD 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 205 ELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH---TVTTFYMAL--IFMYVWPQAMDSRSSNK 279
Cdd:cd15954   172 AIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHicaIVITYTPAFftFFAHRFGGHHITPHIHI 251
                         250       260
                  ....*....|....*....|....
gi 1835244964 280 LISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15954   252 IMANLYLLLPPMMNPIVYGVKTKQ 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
46-305 2.16e-21

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 91.50  E-value: 2.16e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFV--LVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVF- 122
Cdd:cd15948     3 WISIPFCSAFTvaLLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLh 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 123 SFLVCTGRVLLAsMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPI 193
Cdd:cd15948    83 SFSIMESAVLLA-MAFDRYVAIcnplryatiLTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 194 PKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALIFMYVWPQA 271
Cdd:cd15948   162 VKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHicAILVFYTPVVLSSTMHRF 241
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1835244964 272 MDSRSSNK--LISAVYTVLTPVINPLIYCLRNKEFK 305
Cdd:cd15948   242 ARHVAPHVhiLLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
46-305 1.44e-20

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 89.84  E-value: 1.44e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  46 FLTAPAASLFVL--VENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVF- 122
Cdd:cd15949    18 WISIPFCSMYLIavLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSSNEIPLHACLLQMFLIh 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 123 SFLVCTGRVLLAsMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNVLKHIFCDISPI 193
Cdd:cd15949    98 SFSAIESGIFLA-MAFDRYVAIcnplrhktiLTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWYRTNIIAHSYCEHMAV 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 194 PKLAC*DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH--TVTTFYMALI---FMYVW 268
Cdd:cd15949   177 VGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHvcAILAFYVPIAvssLIHRF 256
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1835244964 269 PQAMdSRSSNKLISAVYTVLTPVINPLIYCLRNKEFK 305
Cdd:cd15949   257 GQNV-PPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
54-303 1.26e-18

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 84.05  E-value: 1.26e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVLL 133
Cdd:cd15955    12 LLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAFESGIL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 134 ASMACDGYQAI---------------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTfcgsnVLKHIFCDISPIPKLAC 198
Cdd:cd15955    92 LAMALDRYVAIchplrhssiltpqvlLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRST-----VISHSYCEHMAVVKLAA 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 199 *DFSTTELVGFVLTFSILVFPLVATMLSYGHITLAVPRVPSATAV*RAFSTRASH-TVTTFYMALIFMYVWPQAMDSR-- 275
Cdd:cd15955   167 DDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHiFVFLLFYTLAFFSFFAHRFGHHva 246
                         250       260
                  ....*....|....*....|....*....
gi 1835244964 276 -SSNKLISAVYTVLTPVINPLIYCLRNKE 303
Cdd:cd15955   247 pYVHILLSNLYLLVPPVLNPIVYGVKTKQ 275
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
59-297 2.18e-17

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 80.03  E-value: 2.18e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  59 ENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRG-RISFVGCMTQLCVFSFLVCTGRVLLASMA 137
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDwPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 138 CDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFCGSNvlkHIFCDISPipklac*DFSTTELVG 208
Cdd:pfam00001  81 IDRYLAIvhplrykrrRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGN---VTVCFIDF-------PEDLSKPVS 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 209 FVLTFSILVF--PLVATMLSYGHI--TLAVPRVPSATAV*RAFSTRASHTVTT-------FYMALIFMYVWPQAMDSRSS 277
Cdd:pfam00001 151 YTLLISVLGFllPLLVILVCYTLIirTLRKSASKQKSSERTQRRRKALKTLAVvvvvfilCWLPYHIVNLLDSLALDCEL 230
                         250       260
                  ....*....|....*....|....*.
gi 1835244964 278 NKLISAVYTV------LTPVINPLIY 297
Cdd:pfam00001 231 SRLLDKALSVtlwlayVNSCLNPIIY 256
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
54-308 2.39e-05

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 45.27  E-value: 2.39e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  54 LFVLVENLAVILTIWGSSSLHRPMHYFpgiLSSLEiwyVSDTI------PKMLDGFLMQRGRISFVGCMTQLCVFSFLVC 127
Cdd:cd14969    12 VLGVVLNGLVIIVFLKKKKLRTPLNLF---LLNLA---LADLLmsvvgyPLSFYSNLSGRWSFGDPGCVIYGFAVTFLGL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 128 TGRVLLASMACDGYQAImtmglCVQLVAFAF---VSGFIISVIKVYSSSSTTF----CGSNVLKHIFCDISPipklac*D 200
Cdd:cd14969    86 VSISTLAALAFERYLVI-----VRPLKAFRLskrRALILIAFIWLYGLFWALPplfgWSSYVPEGGGTSCSV-------D 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 201 FSTTELVG----FVLTFSILVFPLVATMLSYGHITLAVPRVPS-ATAV*RAFSTRAS------HTVTTFYMALIFMYVW- 268
Cdd:cd14969   154 WYSKDPNSlsyiVSLFVFCFFLPLAIIIFCYYKIYRTLRKMSKrAARRKNSAITKRTkkaekkVAKMVLVMIVAFLIAWt 233
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1835244964 269 PQAMDSRSS----NKLISAVYTVLT-------PVINPLIYCLRNKEFKDAL 308
Cdd:cd14969   234 PYAVVSLYVsfggESTIPPLLATIPalfakssTIYNPIIYVFMNKQFRRAL 284
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
53-301 2.42e-05

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 44.97  E-value: 2.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  53 SLFVLVENLAVILTIWGSSSLHRPMHYFPGILSSLEIWYVSDTIPKMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVL 132
Cdd:cd00637     9 FVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILT 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 133 LASMACDGYQAI---------MTMGLCVQLVAFAFVSGFIISVIKVYSSSSTTFcgsnvlkhifcDISPIPKLAC*DFST 203
Cdd:cd00637    89 LTAISVDRYLAIvhplryrrrFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDY-----------GGYCCCCLCWPDLTL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 204 TELVGFVLTFSILVFPLVATMLSYGHITLAV-------PRVPSATAV*RAFSTRASHTVTTFYMALIF-------MYVWP 269
Cdd:cd00637   158 SKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLrrhrrriRSSSSNSSRRRRRRRERKVTKTLLIVVVVFllcwlpyFILLL 237
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1835244964 270 QAMDSRSSNKLISAVYTVLT------PVINPLIYCLRN 301
Cdd:cd00637   238 LDVFGPDPSPLPRILYFLALllaylnSAINPIIYAFFN 275
7tmA_S1PR1_Edg1 cd15346
sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial ...
55-85 1.21e-03

sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320468 [Multi-domain]  Cd Length: 277  Bit Score: 39.86  E-value: 1.21e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1835244964  55 FVLVENLAVILTIWGSSSLHRPMHYFPGILS 85
Cdd:cd15346    13 FIILENIFVLLTIWKTKKFHRPMYYFIGNLA 43
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
51-85 6.45e-03

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 37.45  E-value: 6.45e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1835244964  51 AASLFVLVENLAVILTIWGSSSLHRPMHYFPGILS 85
Cdd:cd15102     9 AICCFIVLENLLVLIAIWRHMKFHRPMYYFLGNLA 43
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
53-308 9.20e-03

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 37.27  E-value: 9.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964  53 SLFVLVENLAVILTIWGSSSLHRPMHYFPGILSsleiwyVSDtipkMLDGFLMQRGRISFVGCMTQLCVFSFLVCTGRVL 132
Cdd:cd14972     9 GVFIVVENSLVLAAIIKNRRLHKPMYILIANLA------AAD----LLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 133 LASMACDG------------------YQAIMTMGLCVQLVAFAFVSGFIISVIKVYssssttfcGSNvlkhifCDISPIP 194
Cdd:cd14972    79 LSLLASAYsllaiavdryisivhgltYVNNVTNKRVKVLIALVWVWSVLLALLPVL--------GWN------CVLCDQE 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835244964 195 klAC*DFSTTELVGFVLTFSILVF-PLVATMLSYGHITLAV--------PRVPSATAV*RAFSTRASHTVTT-------- 257
Cdd:cd14972   145 --SCSPLGPGLPKSYLVLILVFFFiALVIIVFLYVRIFWCLwrhanaiaARQEAAVPAQPSTSRKLAKTVVIvlgvflvc 222
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1835244964 258 ---FYMALIFMYVWPQAMDSRSSNKLISaVYTVLTPVINPLIYCLRNKEFKDAL 308
Cdd:cd14972   223 wlpLLILLVLDVLCPSVCDIQAVFYYFL-VLALLNSAINPIIYAFRLKEMRRAV 275
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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