|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
504-989 |
8.19e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.86 E-value: 8.19e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETS--Y 581
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRreL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 582 QQREEQLRREKEVLSAQHASYCREAEQARAELvAQHQRQMAMAEQERDQEVARLRELQQAsILEMRKDHEHQLQRLKMLK 661
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEEL-EEAEEELEEAEAELAEAEEALLEAEAE-LAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 662 DQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRALQERLG---RQQRDMEEE 738
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAlleLLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 739 RNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMNKCG 818
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 819 EERRRLAAEWAEYFTQQKLSKerAEREAERAMHADSQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQEL 898
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGR--ATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAA 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 899 RLEKDRLHKASL--RLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLA 976
Cdd:COG1196 631 RLEAALRRAVTLagRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
490
....*....|...
gi 1720365641 977 QQRLQLDRVRQEV 989
Cdd:COG1196 711 EAEEERLEEELEE 723
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
512-981 |
2.72e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.14 E-value: 2.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 512 QLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSYQQREEQLRRE 591
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 592 KEVLS-AQHASYCREAEQARAELVAQHQRQMAmAEQERDQEVARLRELQQASILEMRKDHEHQLQRLKMLKDQEIDAVTS 670
Cdd:COG1196 393 RAAAElAAQLEELEEAEEALLERLERLEEELE-ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 671 ATSHTRSLNGIIEQMEKFSSSLNTLSS-RVEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGkm 749
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEaEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ-- 549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 750 EVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMNKCGEER---RRLAA 826
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTllgRTLVA 629
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 827 EWAEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTvracELRAKEEKLLAEREALERERQELRLEKDRLH 906
Cdd:COG1196 630 ARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL----LEAEAELEELAERLAEEELELEEALLAEEEE 705
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720365641 907 KASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQrvhQEHLSLAQQRLQ 981
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL---ERELERLEREIE 777
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-988 |
4.37e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.94 E-value: 4.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 537 QVRKLE-LERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSYQQREEQLRREKEVLSAQHASYCREAEQARAELVA 615
Cdd:PTZ00121 1210 EERKAEeARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK 1289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 616 QHQRQMAMAEQERDQEVARLRELQQASILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRslngiieQMEKFSSSLNTL 695
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKA-------EAEAAADEAEAA 1362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 696 SSRVEASHLTTSQQRelgiRQQDEQLRALQERlgrqqRDMEEERNRLQEVIGKM-EVRLSEQSRLLEQERWRVAAEKTKA 774
Cdd:PTZ00121 1363 EEKAEAAEKKKEEAK----KKADAAKKKAEEK-----KKADEAKKKAEEDKKKAdELKKAAAAKKKADEAKKKAEEKKKA 1433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 775 ESAQRTLEEQRKI-MVQQIAMEREELERAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHAD 853
Cdd:PTZ00121 1434 DEAKKKAEEAKKAdEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD 1513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 854 SQREGTIISLTKE--QAELTVRACELRAKEEKLLAE--REALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKK 929
Cdd:PTZ00121 1514 EAKKAEEAKKADEakKAEEAKKADEAKKAEEKKKADelKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR 1593
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720365641 930 YEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQ---RVHQEHLSLAQQRLQLDRVRQE 988
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEekkKVEQLKKKEAEEKKKAEELKKA 1655
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
691-989 |
5.03e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.47 E-value: 5.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 691 SLNTLSSRVEASHLTtsQQRELGIRQQDEQLRALQErLGRQQRDMEEERNRLQEVIGKMEVRLSEQS---RLLEQERWRV 767
Cdd:TIGR02168 669 NSSILERRREIEELE--EKIEELEEKIAELEKALAE-LRKELEELEEELEQLRKELEELSRQISALRkdlARLEAEVEQL 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 768 AAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSV---MNKCGEERRRLAAEWAEYF-TQQKLSKERAE 843
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIeqlKEELKALREALDELRAELTlLNEEAANLRER 825
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 844 REAERAMHADSQR-----EGTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLekdRLHKASLRLQARAQE 918
Cdd:TIGR02168 826 LESLERRIAATERrledlEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE---ALALLRSELEELSEE 902
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720365641 919 VEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQR-LQLDRVRQEV 989
Cdd:TIGR02168 903 LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIeDDEEEARRRL 974
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
504-811 |
6.72e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.09 E-value: 6.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIedahrSRIKVLETSYQQ 583
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEI-----SRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 584 REEQLRREKEVLSAQHASYCREAEQARAELvAQHQRQMAMAEQERDQEVARLRELQQAsiLEMRKDHEHQLQRlkmLKDQ 663
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEEL-AELEEKLEELKEELESLEAELEELEAE--LEELESRLEELEE---QLET 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 664 EIDAVTSATSHTRSLNGIIEQMEkfsSSLNTLSSRVEAshlTTSQQRELGIRQQDEQLRALQERLGrqqrDMEEERNRLQ 743
Cdd:TIGR02168 384 LRSKVAQLELQIASLNNEIERLE---ARLERLEDRRER---LQQEIEELLKKLEEAELKELQAELE----ELEEELEELQ 453
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 744 EVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQrtleeQRKIMVQQIAMEREELERAKSALLEEQK 811
Cdd:TIGR02168 454 EELERLEEALEELREELEEAEQALDAAERELAQLQ-----ARLDSLERLQENLEGFSEGVKALLKNQS 516
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
503-974 |
7.68e-12 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 69.41 E-value: 7.68e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLL---ESLQQRHQADLELIEDAHrsRIKVLET 579
Cdd:COG4717 76 LEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLqllPLYQELEALEAELAELPE--RLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 580 SYQQREEqLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRKDHEHQLQRLKM 659
Cdd:COG4717 154 RLEELRE-LEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 660 LKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEasHLTTSQQRELGIrqqdeqLRALQERLGRQQRDMEEER 739
Cdd:COG4717 233 ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLIL--TIAGVLFLVLGL------LALLFLLLAREKASLGKEA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 740 NRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQqiaMEREELERAKSALLEEQKSVMNKCG- 818
Cdd:COG4717 305 EELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE---AEELEEELQLEELEQEIAALLAEAGv 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 819 ---EERRRLAAEWAEYftqQKLskeraereaeramhadsQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERER 895
Cdd:COG4717 382 edeEELRAALEQAEEY---QEL-----------------KEELEELEEQLEELLGELEELLEALDEEELEEELEELEEEL 441
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720365641 896 QELRLEKDRLHKaslRLQARAQEVEHMSKvaSKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLS 974
Cdd:COG4717 442 EELEEELEELRE---ELAELEAELEQLEE--DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLP 515
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
531-810 |
1.15e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.32 E-value: 1.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 531 LSELEAQVRKL---------------ELERAQHRMLLESLQQRHQ---------ADLELIEDAHRSRIKVLETSYQQ-RE 585
Cdd:TIGR02168 195 LNELERQLKSLerqaekaerykelkaELRELELALLVLRLEELREeleelqeelKEAEEELEELTAELQELEEKLEElRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 586 EQLRREKEVLSAQHASYCREAEQARAELVAQHQrqmamaeQERDQEVARLRELQQASILEMRKDHEHQLQRLKMLKDQEi 665
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQIL-------RERLANLERQLEELEAQLEELESKLDELAEELAELEEKL- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 666 davtsaTSHTRSLNGIIEQMEKFSSSLNTLSSRVEAS--HLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQ 743
Cdd:TIGR02168 347 ------EELKEELESLEAELEELEAELEELESRLEELeeQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQ 420
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 744 EVIGKMEVRLSEQSRLLEQERW-RVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQ 810
Cdd:TIGR02168 421 QEIEELLKKLEEAELKELQAELeELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQ 488
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-987 |
2.81e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 68.24 E-value: 2.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 537 QVRKLELERAQHRMLLESLQQRHQaDLELIEDAHRSR--IKVLETSYQQREEQLRREKEVLSAQHASYCREAEQARAELV 614
Cdd:PTZ00121 1102 EAKKTETGKAEEARKAEEAKKKAE-DARKAEEARKAEdaRKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEA 1180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 615 AQHQRQMAMAEQERDQEVARLREL-----QQASILEMRK-DHEHQLQRLKMLKDQEIDAVTSATSHTRSLNgiiEQMEKF 688
Cdd:PTZ00121 1181 ARKAEEVRKAEELRKAEDARKAEAarkaeEERKAEEARKaEDAKKAEAVKKAEEAKKDAEEAKKAEEERNN---EEIRKF 1257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 689 SSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRlqevigkmevrlSEQSRLLEQERWRVA 768
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK------------AEEAKKADEAKKKAE 1325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 769 AEKTKAESAQRTLEEQRKimVQQIAMEREELERAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAER 848
Cdd:PTZ00121 1326 EAKKKADAAKKKAEEAKK--AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 849 AMHAD----SQREGTIISLTKEQAELTVRACELRAK-EEKLLAE---REALERERQELRLEKDRLHKASLRLQARAQE-- 918
Cdd:PTZ00121 1404 KKKADelkkAAAAKKKADEAKKKAEEKKKADEAKKKaEEAKKADeakKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEak 1483
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 919 -VEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLQLDRVRQ 987
Cdd:PTZ00121 1484 kADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKK 1553
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
508-988 |
5.96e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 67.09 E-value: 5.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 508 AAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRmlLESLQQRHQADLELIEDAHR---------SRIKVLE 578
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADE--AEAAEEKAEAAEKKKEEAKKkadaakkkaEEKKKAD 1394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 579 TSYQQREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRKDHEHQlqrlk 658
Cdd:PTZ00121 1395 EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEA----- 1469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 659 mlkdQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEAshlttsqqrelgiRQQDEQLRALQERLGRQQRDMEEE 738
Cdd:PTZ00121 1470 ----KKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA-------------KKKADEAKKAEEAKKADEAKKAEE 1532
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 739 RNRLQEVIGKMEVRLSEQSRllEQERWRVAAEKTKAESAQRtlEEQRKIMVQQIAmerEELERAKSALLEEqksvMNKCG 818
Cdd:PTZ00121 1533 AKKADEAKKAEEKKKADELK--KAEELKKAEEKKKAEEAKK--AEEDKNMALRKA---EEAKKAEEARIEE----VMKLY 1601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 819 EERRRLAAEwaeyftqqKLSKERAEREAERAMHADSQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERER--- 895
Cdd:PTZ00121 1602 EEEKKMKAE--------EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAeed 1673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 896 ----QELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQAlQEAQQMQNEQQGRLQVVQRQQEWLRQ--QEQRVH 969
Cdd:PTZ00121 1674 kkkaEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKA-EELKKAEEENKIKAEEAKKEAEEDKKkaEEAKKD 1752
|
490
....*....|....*....
gi 1720365641 970 QEHLSLAQQRLQLDRVRQE 988
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAE 1771
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
543-989 |
1.02e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 65.94 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 543 LERAQHRMLLESLQQRhqadlelIEDAHRSRIKVLETSYQQREEqLRREKEVLSAQHASYcREAEQARAELVAQHQRQMA 622
Cdd:COG4717 39 LLAFIRAMLLERLEKE-------ADELFKPQGRKPELNLKELKE-LEEELKEAEEKEEEY-AELQEELEELEEELEELEA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 623 mAEQERDQEVARLRELQQAsilemrKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEAS 702
Cdd:COG4717 110 -ELEELREELEKLEKLLQL------LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 703 HLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERWR--------------VA 768
Cdd:COG4717 183 LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKearlllliaaallaLL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 769 AEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMNKCGEERRRlAAEWAEYFTQQKLSKERAEREAER 848
Cdd:COG4717 263 GLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELE-EEELEELLAALGLPPDLSPEELLE 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 849 AMHADSQREGTIISLTKEQAELTVRACELR---------AKEEKLLAEREALERERQELRlekDRLHKASLRLQARAQEV 919
Cdd:COG4717 342 LLDRIEELQELLREAEELEEELQLEELEQEiaallaeagVEDEEELRAALEQAEEYQELK---EELEELEEQLEELLGEL 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 920 EHMSKVASKkyEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHlSLAQQRLQLDRVRQEV 989
Cdd:COG4717 419 EELLEALDE--EELEEELEELEEELEELEEELEELREELAELEAELEQLEEDG-ELAELLQELEELKAEL 485
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
714-959 |
1.16e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.85 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 714 IRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKME------VRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKI 787
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEelrlevSELEEEIEELQKELYALANEISRLEQQKQILRERLAN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 788 MVQQIAMEREELERAKS---------ALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREG 858
Cdd:TIGR02168 314 LERQLEELEAQLEELESkldelaeelAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 859 TIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEK-----DRLHKASLRLQARAQEVEHMSKVASKKYEEG 933
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKElqaelEELEEELEELQEELERLEEALEELREELEEA 473
|
250 260
....*....|....*....|....*.
gi 1720365641 934 EQALQEAQQMQNEQQGRLQVVQRQQE 959
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQE 499
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
524-905 |
1.55e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 1.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 524 LLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAhrsrikvletsyQQREEQLRREKEVLSAQHASYC 603
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQL------------RKELEELSRQISALRKDLARLE 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 604 REAEQArAELVAQHQRQMAMAEQERDQEVARLRELQQAsilemRKDHEHQLQRLKmlkdqeidavtsatshtrslngiiE 683
Cdd:TIGR02168 740 AEVEQL-EERIAQLSKELTELEAEIEELEERLEEAEEE-----LAEAEAEIEELE------------------------A 789
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 684 QMEKFSSSLNTLSSRVEASHlttsqqrelgirqqdEQLRALQERLGRQQRDMEEERNRLQEvIGKMEVRLSEQSRLLEQE 763
Cdd:TIGR02168 790 QIEQLKEELKALREALDELR---------------AELTLLNEEAANLRERLESLERRIAA-TERRLEDLEEQIEELSED 853
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 764 RWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALlEEQKSVMNKCGEERRRLAAEWAEyfTQQKLSKERAE 843
Cdd:TIGR02168 854 IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSEL-EELSEELRELESKRSELRRELEE--LREKLAQLELR 930
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720365641 844 REAERamhadsQREGTIISLTKEQAELTVRacELRAKEEKLLAEREALERERQELRLEKDRL 905
Cdd:TIGR02168 931 LEGLE------VRIDNLQERLSEEYSLTLE--EAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
494-988 |
3.87e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 3.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 494 QSLLPGSGYQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQ------ADLELIE 567
Cdd:TIGR02168 316 RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLEtlrskvAQLELQI 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 568 DAHRSRIKVLETSYQQREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQAS----- 642
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELeeaeq 475
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 643 -ILEMRKDHEHQLQRLKMLKDQE------IDAVTSATSHTRSLNGI-------IEQMEKFSSSLNT-LSSRVEA------ 701
Cdd:TIGR02168 476 aLDAAERELAQLQARLDSLERLQenlegfSEGVKALLKNQSGLSGIlgvlselISVDEGYEAAIEAaLGGRLQAvvvenl 555
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 702 ------------------SHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLS--------- 754
Cdd:TIGR02168 556 naakkaiaflkqnelgrvTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvvddldnal 635
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 755 EQSRLLEQE-------------RWRVAAEKTKAESAQ-------RTLEEQRKIMVQQIAMEREELERAKSALLEeqksvM 814
Cdd:TIGR02168 636 ELAKKLRPGyrivtldgdlvrpGGVITGGSAKTNSSIlerrreiEELEEKIEELEEKIAELEKALAELRKELEE-----L 710
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 815 NKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALE-- 892
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEaq 790
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 893 -----RERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQR 967
Cdd:TIGR02168 791 ieqlkEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEE 870
|
570 580
....*....|....*....|.
gi 1720365641 968 VHQEHLSLAQQRLQLDRVRQE 988
Cdd:TIGR02168 871 LESELEALLNERASLEEALAL 891
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
503-951 |
6.84e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.54 E-value: 6.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQvellQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSYQ 582
Cdd:TIGR02168 350 KEELESLEAELEELEAELE----ELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 583 QREEQLRREKEVLSAQHASYCREAEQARAEL------VAQHQRQMAMAEQERDQEVARLRELQQ--ASILEMRKDHE--- 651
Cdd:TIGR02168 426 LLKKLEEAELKELQAELEELEEELEELQEELerleeaLEELREELEEAEQALDAAERELAQLQArlDSLERLQENLEgfs 505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 652 --------HQLQR-----------------------------------------------------------LKMLKDQE 664
Cdd:TIGR02168 506 egvkallkNQSGLsgilgvlselisvdegyeaaieaalggrlqavvvenlnaakkaiaflkqnelgrvtflpLDSIKGTE 585
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 665 IDA-----VTSATSHTRSLNGIIEQMEKFSSSLNTLSSRV---------------------------------------- 699
Cdd:TIGR02168 586 IQGndreiLKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVlvvddldnalelakklrpgyrivtldgdlvrpggvitggs 665
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 700 -EASHLTTSQQRELG-----IRQQDEQLRALQ---ERLGRQQRDMEEERNRLQEVIGKMEVRLSEQS---RLLEQERWRV 767
Cdd:TIGR02168 666 aKTNSSILERRREIEeleekIEELEEKIAELEkalAELRKELEELEEELEQLRKELEELSRQISALRkdlARLEAEVEQL 745
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 768 AAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSV---MNKCGEERRRLAAEWAEYF-TQQKLSKERAE 843
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIeqlKEELKALREALDELRAELTlLNEEAANLRER 825
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 844 REAERAMHADSQRE------------GTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKDRLHKASLR 911
Cdd:TIGR02168 826 LESLERRIAATERRledleeqieelsEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE 905
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1720365641 912 LQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRL 951
Cdd:TIGR02168 906 LESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL 945
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
504-836 |
9.43e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.15 E-value: 9.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLEL--ERAQHRM------LLESLQQRHQADLELIE-----DAH 570
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAevEQLEERIaqlskeLTELEAEIEELEERLEEaeeelAEA 780
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 571 RSRIKVLETSYQQREEQLRREKEVLSAQHASYCREAEQAR--AELVAQHQRQMAMAEQERDQEVARLRELqQASILEMRK 648
Cdd:TIGR02168 781 EAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAAnlRERLESLERRIAATERRLEDLEEQIEEL-SEDIESLAA 859
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 649 DHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVeashlttsqqrelgiRQQDEQLRALQERL 728
Cdd:TIGR02168 860 EIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR---------------SELRRELEELREKL 924
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 729 GRQQRDMEEERNRLQEVIGkmevRLSEQSRLLEQErwrVAAEKTKAESAQRTLEEQrkimVQQIAMEREELERAKSALLE 808
Cdd:TIGR02168 925 AQLELRLEGLEVRIDNLQE----RLSEEYSLTLEE---AEALENKIEDDEEEARRR----LKRLENKIKELGPVNLAAIE 993
|
330 340
....*....|....*....|....*...
gi 1720365641 809 EQKSVmnkcgEERRrlaaewaEYFTQQK 836
Cdd:TIGR02168 994 EYEEL-----KERY-------DFLTAQK 1009
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
503-892 |
1.86e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 1.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSYQ 582
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 583 QREEQLRREKEVLSAQHasycREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRK----DHEHQLQRLK 658
Cdd:COG1196 454 LEEEEEALLELLAELLE----EAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLlaglRGLAGAVAVL 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 659 MLKDQEIDAVTSATSHTRSLNGIIEQMEKFSS----------------SLNTLSSRVEASHLTTSQQRELGIRQQDEQLR 722
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEVAAAaieylkaakagratflPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 723 ALQERLGRQQRDMEEER--NRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELE 800
Cdd:COG1196 610 EADARYYVLGDTLLGRTlvAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA 689
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 801 RAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTVRAcELRAK 880
Cdd:COG1196 690 EEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE-ELERE 768
|
410
....*....|..
gi 1720365641 881 EEKLLAEREALE 892
Cdd:COG1196 769 LERLEREIEALG 780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
535-987 |
2.29e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.08 E-value: 2.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 535 EAQVRKLELERAQHRML-LESLQQRHQADLELIEDAHRSRI--KVLETSYQQREEQLRREKEVLSAQHASycREAEQAR- 610
Cdd:PTZ00121 1239 AEEAKKAEEERNNEEIRkFEEARMAHFARRQAAIKAEEARKadELKKAEEKKKADEAKKAEEKKKADEAK--KKAEEAKk 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 611 ---AELVAQHQRQMAMA------EQERDQEVARLRELQQASILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGI 681
Cdd:PTZ00121 1317 adeAKKKAEEAKKKADAakkkaeEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 682 IEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLR--ALQERLGRQQRDMEEERNRLQEVIGKME--------V 751
Cdd:PTZ00121 1397 KKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKkkAEEAKKADEAKKKAEEAKKAEEAKKKAEeakkadeaK 1476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 752 RLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALlEEQKSVMNKCGEERR-----RLAA 826
Cdd:PTZ00121 1477 KKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAE-EAKKADEAKKAEEKKkadelKKAE 1555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 827 EW--------AEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKE----QAELTVRACELRAKEEKLLAEREALERE 894
Cdd:PTZ00121 1556 ELkkaeekkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEekkmKAEEAKKAEEAKIKAEELKKAEEEKKKV 1635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 895 RQELRLEKDRLHKASlrlQARAQEVEHMSKVA--SKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQ--RVHQ 970
Cdd:PTZ00121 1636 EQLKKKEAEEKKKAE---ELKKAEEENKIKAAeeAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEElkKKEA 1712
|
490
....*....|....*..
gi 1720365641 971 EHLSLAQQRLQLDRVRQ 987
Cdd:PTZ00121 1713 EEKKKAEELKKAEEENK 1729
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
508-957 |
2.47e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 2.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 508 AAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRM--LLESLQQRHQADlELIEDAHRSR-----IKVLETS 580
Cdd:PTZ00121 1338 AEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKAdaAKKKAEEKKKAD-EAKKKAEEDKkkadeLKKAAAA 1416
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 581 YQQREEQLRREKEVLSAQH----ASYCREAEQAR--AELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRKDHEHQL 654
Cdd:PTZ00121 1417 KKKADEAKKKAEEKKKADEakkkAEEAKKADEAKkkAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAK 1496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 655 QRLKMLKDQEiDAVTSATSHTRSlngiiEQMEKfSSSLNTLSSRVEASHLTTSQQRELG--IRQQDEQLRALQERLGRQQ 732
Cdd:PTZ00121 1497 KKADEAKKAA-EAKKKADEAKKA-----EEAKK-ADEAKKAEEAKKADEAKKAEEKKKAdeLKKAEELKKAEEKKKAEEA 1569
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 733 RDMEEERN---RLQEVIGKME-VRLSEQSRLLEQERWRVAAEKTKAESAQ------RTLEEQRKIMVQQIAMEREELERA 802
Cdd:PTZ00121 1570 KKAEEDKNmalRKAEEAKKAEeARIEEVMKLYEEEKKMKAEEAKKAEEAKikaeelKKAEEEKKKVEQLKKKEAEEKKKA 1649
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 803 KSALLEEQKSVMNKcGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTiiSLTKEQAELTVRACELRAKEE 882
Cdd:PTZ00121 1650 EELKKAEEENKIKA-AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE--ELKKKEAEEKKKAEELKKAEE 1726
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720365641 883 KLLAEREALERERQELRLEKDRLHKAslrlQARAQEVEHMSKVASKKYEEGEQALQEA--QQMQNEQQGRLQVVQRQ 957
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEAKKD----EEEKKKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRMEVDKK 1799
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
606-809 |
4.26e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.70 E-value: 4.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 606 AEQARAELvaqhQRQMAMAEQERDQEVARLRELQQAsiLEMRKDHEHQLQRLKMLKDQEIDaVTSATSHTRSLNGIIEQM 685
Cdd:COG4913 608 NRAKLAAL----EAELAELEEELAEAEERLEALEAE--LDALQERREALQRLAEYSWDEID-VASAEREIAELEAELERL 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 686 EKFSSSLNTLSSRVEAShlttsQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERW 765
Cdd:COG4913 681 DASSDDLAALEEQLEEL-----EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERF 755
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1720365641 766 RVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEE 809
Cdd:COG4913 756 AAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
709-1005 |
4.44e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 4.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 709 QRELGIRQQDEQLRALQErLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQ--ERWRVAAEKTKAESAQRTLEEQRK 786
Cdd:TIGR02169 217 LKEKREYEGYELLKEKEA-LERQKEAIERQLASLEEELEKLTEEISELEKRLEEieQLLEELNKKIKDLGEEEQLRVKEK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 787 ImvQQIAMEREELERAKSALLEEQKSVMN---KCGEERRRLAAEWAEYFTQQklskERAEREAERAMHADSQREGTIISL 863
Cdd:TIGR02169 296 I--GELEAEIASLERSIAEKERELEDAEErlaKLEAEIDKLLAEIEELEREI----EEERKRRDKLTEEYAELKEELEDL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 864 TKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQM 943
Cdd:TIGR02169 370 RAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALE 449
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720365641 944 QNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLQLDRVRQEVPASLPGLPPRVQGPAA 1005
Cdd:TIGR02169 450 IKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRA 511
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
513-892 |
1.05e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.70 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 513 LQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRhqadlelIEDAHRSrIKVLETSYQQREEQLRREK 592
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQE-------LSDASRK-IGEIEKEIEQLEQEEEKLK 736
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 593 EVLsAQHASYCREAEQARAElvaqhqrqmamAEQERDQEVARLRELQqASILEMRKDHEHQLQRLKMLKDQEIDAvtsat 672
Cdd:TIGR02169 737 ERL-EELEEDLSSLEQEIEN-----------VKSELKELEARIEELE-EDLHKLEEALNDLEARLSHSRIPEIQA----- 798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 673 shtrSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELgIRQQDEQLRALQER---LGRQQRDMEEERNRLQEVIGKM 749
Cdd:TIGR02169 799 ----ELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE-IQELQEQRIDLKEQiksIEKEIENLNGKKEELEEELEEL 873
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 750 EVRLSE-QSRL--LEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIamerEELERAKSALLEEQKSVmnkcGEERRRLAA 826
Cdd:TIGR02169 874 EAALRDlESRLgdLKKERDELEAQLRELERKIEELEAQIEKKRKRL----SELKAKLEALEEELSEI----EDPKGEDEE 945
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720365641 827 EWAEYFTQQKLSKERAEreaeraMHADSQREGTIISLTKEQAELTV-RACELRAKEEKLLAEREALE 892
Cdd:TIGR02169 946 IPEEELSLEDVQAELQR------VEEEIRALEPVNMLAIQEYEEVLkRLDELKEKRAKLEEERKAIL 1006
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
504-749 |
1.07e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.69 E-value: 1.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLET---- 579
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDiesl 857
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 580 -----SYQQREEQLRREKEVLSAQHASYCREAEQARAELVAQhQRQMAMAEQERDQEVARLRELQqasilEMRKDHEHQL 654
Cdd:TIGR02168 858 aaeieELEELIEELESELEALLNERASLEEALALLRSELEEL-SEELRELESKRSELRRELEELR-----EKLAQLELRL 931
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 655 QRLKMLKDQEIDAVTSatSHTRSLNGIIEQMEKFSSSLNTLSSRVeasHLTTSQQRELG------IrqqdEQLRALQER- 727
Cdd:TIGR02168 932 EGLEVRIDNLQERLSE--EYSLTLEEAEALENKIEDDEEEARRRL---KRLENKIKELGpvnlaaI----EEYEELKERy 1002
|
250 260
....*....|....*....|....
gi 1720365641 728 --LGRQQRDMEEERNRLQEVIGKM 749
Cdd:TIGR02168 1003 dfLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
578-973 |
1.46e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.38 E-value: 1.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 578 ETSYQQREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVAR----LRELQQASILEMRKDHEHQ 653
Cdd:PTZ00121 1078 DFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARkaedARKAEEARKAEDAKRVEIA 1157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 654 lQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRALQERLGRQQR 733
Cdd:PTZ00121 1158 -RKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAK 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 734 DMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRV---AAEKTKAESAQRTlEEQRKIMVQQIAMEREELERAKSALLEEQ 810
Cdd:PTZ00121 1237 KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAaikAEEARKADELKKA-EEKKKADEAKKAEEKKKADEAKKKAEEAK 1315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 811 KSvmnkcgEERRRLAAEWAEYFTQQKlSKERAEREAERAMHADSQREGTIISLTKEQAEltvrACELRAKEEKLLAerEA 890
Cdd:PTZ00121 1316 KA------DEAKKKAEEAKKKADAAK-KKAEEAKKAAEAAKAEAEAAADEAEAAEEKAE----AAEKKKEEAKKKA--DA 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 891 LERERQELRlEKDRLHKASLRLQARAQEVEHmSKVASKKYEEGEQALQEAQQMQnEQQGRLQVVQRQQEWLRQQEQRVHQ 970
Cdd:PTZ00121 1383 AKKKAEEKK-KADEAKKKAEEDKKKADELKK-AAAAKKKADEAKKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEAKKA 1459
|
...
gi 1720365641 971 EHL 973
Cdd:PTZ00121 1460 EEA 1462
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
504-979 |
1.58e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.83 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVEL------LQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRI-KV 576
Cdd:TIGR00618 229 KHLREALQQTQQSHAYLTQKReaqeeqLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIeQQ 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 577 LETSYQQREEQLR-REKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEmrkDHEHQLQ 655
Cdd:TIGR00618 309 AQRIHTELQSKMRsRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLT---QHIHTLQ 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 656 RLKMLKDQEIDAVTSATShtrslngiIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDM 735
Cdd:TIGR00618 386 QQKTTLTQKLQSLCKELD--------ILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 736 EEERNRLQEVIGKMEVRLSEQSRLLEQErwrvaaEKTKAESAQRTLEEQRkimvqqiamEREELERAKSALLEEQKSVMN 815
Cdd:TIGR00618 458 KIHLQESAQSLKEREQQLQTKEQIHLQE------TRKKAVVLARLLELQE---------EPCPLCGSCIHPNPARQDIDN 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 816 KCGEERRRLAAEWAEYFTQQKLSKEraereaeramhadsqrEGTIISLTKeqaeltvRACELRAKEEKLLAEREALERER 895
Cdd:TIGR00618 523 PGPLTRRMQRGEQTYAQLETSEEDV----------------YHQLTSERK-------QRASLKEQMQEIQQSFSILTQCD 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 896 QELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAqqmQNEQQGRLQVVQRQQEwLRQQEQRVHQEHLSL 975
Cdd:TIGR00618 580 NRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPE---QDLQDVRLHLQQCSQE-LALKLTALHALQLTL 655
|
....
gi 1720365641 976 AQQR 979
Cdd:TIGR00618 656 TQER 659
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
520-932 |
3.65e-08 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 57.21 E-value: 3.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 520 LQVELLQSQTKLSEL----EAQVRKLELERAQHRMLLESLQQRHQA----DLELIEDAHRSRIKVLETSYQQREEQ---- 587
Cdd:pfam07888 32 LQNRLEECLQERAELlqaqEAANRQREKEKERYKRDREQWERQRRElesrVAELKEELRQSREKHEELEEKYKELSasse 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 588 -LRREKEVLSAQhasycREAEQARAELVAQHQRQMAMAEQERDQEVARLRElQQASILEMRKDHEHQLQRLKMLKDQEID 666
Cdd:pfam07888 112 eLSEEKDALLAQ-----RAAHEARIRELEEDIKTLTQRVLERETELERMKE-RAKKAGAQRKEEEAERKQLQAKLQQTEE 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 667 AVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEaSHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVI 746
Cdd:pfam07888 186 ELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLT-QKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 747 GKMEVRLSE--QSRL-LEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMnkcgEERrr 823
Cdd:pfam07888 265 AQRDRTQAElhQARLqAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQ----EER-- 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 824 laaewaeyftqqklskeraereaeramhadSQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKD 903
Cdd:pfam07888 339 ------------------------------MEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQ 388
|
410 420
....*....|....*....|....*....
gi 1720365641 904 RLHKASLRLQARaqevehMSKVASKKYEE 932
Cdd:pfam07888 389 ELLEYIRQLEQR------LETVADAKWSE 411
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
504-990 |
5.24e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.29 E-value: 5.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELL-------QSQTKLSELEAQVRKLELERAQHRMLLESLQQ----------RHQADLELI 566
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRSQLLTLctpcmpdTYHERKQVLEKELKHLREALQQTQQSHAYLTQkreaqeeqlkKQQLLKQLR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 567 EDAHRSRIKVLETSYQQREEQLRREKEVLsAQHASYCREAEQARAELVAQHQRQMAMAEQERDQevaRLRELQQASILEM 646
Cdd:TIGR00618 267 ARIEELRAQEAVLEETQERINRARKAAPL-AAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMK---RAAHVKQQSSIEE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 647 RKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQ--QDEQLRAL 724
Cdd:TIGR00618 343 QRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtRTSAFRDL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 725 QERL--GRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQErwrvAAEKTKAESAQrtlEEQRKIMVQQIAMEREELERA 802
Cdd:TIGR00618 423 QGQLahAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQE----SAQSLKEREQQ---LQTKEQIHLQETRKKAVVLAR 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 803 KSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTiiSLTKEQAELTVRACELRAKEE 882
Cdd:TIGR00618 496 LLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLT--SERKQRASLKEQMQEIQQSFS 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 883 KLLAEREALERERQELRLEKDRLHK---ASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQE 959
Cdd:TIGR00618 574 ILTQCDNRSKEDIPNLQNITVRLQDlteKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQL 653
|
490 500 510
....*....|....*....|....*....|.
gi 1720365641 960 WLRQQEQRVHQehLSLAQQRLQLDRVRQEVP 990
Cdd:TIGR00618 654 TLTQERVREHA--LSIRVLPKELLASRQLAL 682
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
508-1018 |
1.12e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 56.28 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 508 AAQGQLQSSTAQLQVELLQSQTK---------LSELEAQVRKLELE-RAQHRMLLESLQQRHQ----ADLELIE-----D 568
Cdd:pfam15921 287 ASSARSQANSIQSQLEIIQEQARnqnsmymrqLSDLESTVSQLRSElREAKRMYEDKIEELEKqlvlANSELTEarterD 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 569 AHRSRIKVLETSYQQREEQL-RREKEV-LSAQHASYCREAEQARAELVAQHQRQMamaeQERDQEVARLRELQQASILEM 646
Cdd:pfam15921 367 QFSQESGNLDDQLQKLLADLhKREKELsLEKEQNKRLWDRDTGNSITIDHLRREL----DDRNMEVQRLEALLKAMKSEC 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 647 RKDHEHQLQRLKMlKDQEIDAVTSATSHTRSLNGIIEQ-MEKFSSSLNTL-SSRVEASHLTTS-QQRELGIRQQDEQLRA 723
Cdd:pfam15921 443 QGQMERQMAAIQG-KNESLEKVSSLTAQLESTKEMLRKvVEELTAKKMTLeSSERTVSDLTASlQEKERAIEATNAEITK 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 724 LQERLGRQQRDMEEERNR------LQEVIGKMEVRLSEQSRLLEQERWRV------------AAEKTKAESAQ------- 778
Cdd:pfam15921 522 LRSRVDLKLQELQHLKNEgdhlrnVQTECEALKLQMAEKDKVIEILRQQIenmtqlvgqhgrTAGAMQVEKAQlekeind 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 779 RTLEEQR-KIMVQQIAMEREELErAKSALLEEQKSVMNKCGEERRRLAAEWAEYfTQQKLSKERAEREAERAMHADSQRE 857
Cdd:pfam15921 602 RRLELQEfKILKDKKDAKIRELE-ARVSDLELEKVKLVNAGSERLRAVKDIKQE-RDQLLNEVKTSRNELNSLSEDYEVL 679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 858 GTIISLTKEQAELTVRACELRAKeekllAEREALERERQELR-LEKDRLHKASL----------------RLQARAQEVE 920
Cdd:pfam15921 680 KRNFRNKSEEMETTTNKLKMQLK-----SAQSELEQTRNTLKsMEGSDGHAMKVamgmqkqitakrgqidALQSKIQFLE 754
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 921 HMSKVASKK----YEEGEQALQEAQQM---QNEQQGRLQVVQRQQEWLRQQE---------------------QRVHQEH 972
Cdd:pfam15921 755 EAMTNANKEkhflKEEKNKLSQELSTVateKNKMAGELEVLRSQERRLKEKVanmevaldkaslqfaecqdiiQRQEQES 834
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1720365641 973 LSLA-QQRLQLDRVRQEVPASLPGLPPRVQGPAASSRDAVQAPASSS 1018
Cdd:pfam15921 835 VRLKlQHTLDVKELQGPGYTSNSSMKPRLLQPASFTRTHSNVPSSQS 881
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
528-858 |
2.53e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 2.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 528 QTKLSELEAQVRKLELERAQ---HRMLLESLQQRHQAdleliedAHRSRIKVLETSYQQREEQL---RREKEVLSAQHAS 601
Cdd:TIGR02169 190 DLIIDEKRQQLERLRREREKaerYQALLKEKREYEGY-------ELLKEKEALERQKEAIERQLaslEEELEKLTEEISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 602 YCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELqQASILEMRKDHEHQLQRLKMLKDQEIDAVTsatshtrSLNGI 681
Cdd:TIGR02169 263 LEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGEL-EAEIASLERSIAEKERELEDAEERLAKLEA-------EIDKL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 682 IEQMEKFSSSLNTLSSRVEA--SHLTTSQQRELGIRQQ----DEQLRALQERLGRQQRDMEEERNRLQEVIGKMEvRLSE 755
Cdd:TIGR02169 335 LAEIEELEREIEEERKRRDKltEEYAELKEELEDLRAEleevDKEFAETRDELKDYREKLEKLKREINELKRELD-RLQE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 756 QSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSV------MNKCGEERRRLAAEWA 829
Cdd:TIGR02169 414 ELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELydlkeeYDRVEKELSKLQRELA 493
|
330 340
....*....|....*....|....*....
gi 1720365641 830 EYFTQQKLSKERAEREAERAMHADSQREG 858
Cdd:TIGR02169 494 EAEAQARASEERVRGGRAVEEVLKASIQG 522
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
502-657 |
3.14e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 54.64 E-value: 3.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 502 YQKQLLAAQGQL-----QSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRS-RIK 575
Cdd:COG3206 187 LRKELEEAEAALeefrqKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSpVIQ 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 576 VLETSYQQREEQLRREKEVLSAQHASYcREAEQARAELVAQHQRQMAMAEQERDQEVARLRElQQASILEMRKDHEHQLQ 655
Cdd:COG3206 267 QLRAQLAELEAELAELSARYTPNHPDV-IALRAQIAALRAQLQQEAQRILASLEAELEALQA-REASLQAQLAQLEARLA 344
|
..
gi 1720365641 656 RL 657
Cdd:COG3206 345 EL 346
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
512-781 |
4.43e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.19 E-value: 4.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 512 QLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQ------ADLELIEDAHRSRikvlETSYQQRE 585
Cdd:COG3096 344 RQQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDslksqlADYQQALDVQQTR----AIQYQQAV 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 586 EQLRREKEVLSA----------QHASYCREAEQARAELVAQHQRqMAMAEQERDQ-------------EVARLRELQQA- 641
Cdd:COG3096 420 QALEKARALCGLpdltpenaedYLAAFRAKEQQATEEVLELEQK-LSVADAARRQfekayelvckiagEVERSQAWQTAr 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 642 SILEMRKDHEHQLQRLKMLK----------DQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVE--ASHLTTSQQ 709
Cdd:COG3096 499 ELLRRYRSQQALAQRLQQLRaqlaeleqrlRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEelEEQAAEAVE 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 710 RELGIRQQDEQLRALQERLGRQQ---RDMEEERNRLQEVIGK--------MEVR--LSEQSRLLEQERWRVAAEKTKAES 776
Cdd:COG3096 579 QRSELRQQLEQLRARIKELAARApawLAAQDALERLREQSGEaladsqevTAAMqqLLEREREATVERDELAARKQALES 658
|
....*
gi 1720365641 777 AQRTL 781
Cdd:COG3096 659 QIERL 663
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
516-984 |
4.46e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.19 E-value: 4.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 516 STAQLQVELLQSQTKLseLEAQVRKLELERAqhrmlLESLQQRhQADLELIEDAHRSRIKVLETSYQQREEQLRREKEVL 595
Cdd:COG3096 286 RALELRRELFGARRQL--AEEQYRLVEMARE-----LEELSAR-ESDLEQDYQAASDHLNLVQTALRQQEKIERYQEDLE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 596 SAQHASycREAEQARAElvAQHQRQMAMAEQER-DQEVARLR----ELQQAsiLEMRKDHEHQLQrlkmlkdQEIDAVTS 670
Cdd:COG3096 358 ELTERL--EEQEEVVEE--AAEQLAEAEARLEAaEEEVDSLKsqlaDYQQA--LDVQQTRAIQYQ-------QAVQALEK 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 671 AtshtRSLNGiieqmekfsssLNTLSSRVEASHLTTSQQRElgiRQQDEQLRALQERLgrqqRDMEEERNRLQEVIGKME 750
Cdd:COG3096 425 A----RALCG-----------LPDLTPENAEDYLAAFRAKE---QQATEEVLELEQKL----SVADAARRQFEKAYELVC 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 751 VRLSEQSRlleQERWRVAAEKTKAESAQRTLEEQrkimVQQIAMEREELERaksaLLEEQKSVmnkcgeerRRLAAEWAE 830
Cdd:COG3096 483 KIAGEVER---SQAWQTARELLRRYRSQQALAQR----LQQLRAQLAELEQ----RLRQQQNA--------ERLLEEFCQ 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 831 YFTQQKLSKERAEREAeramhadSQREGTIISLTKEQAELTVRACELRAkeekllaEREALERERQELRLEKDRLHKASL 910
Cdd:COG3096 544 RIGQQLDAAEELEELL-------AELEAQLEELEEQAAEAVEQRSELRQ-------QLEQLRARIKELAARAPAWLAAQD 609
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720365641 911 RLQARAQEVEhmskvaskkyeegeQALQEAQQMQNeqqgrlqvvQRQQewLRQQEQRVHQEHLSLAQQRLQLDR 984
Cdd:COG3096 610 ALERLREQSG--------------EALADSQEVTA---------AMQQ--LLEREREATVERDELAARKQALES 658
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
604-996 |
5.13e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 54.20 E-value: 5.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 604 REAEQARAELVAQHQRQMAMAEQERDQ----EVARLRELQQasilEMRKDHEhQLQRLKMLKDQEIDAVTSATSHTRSLN 679
Cdd:TIGR00618 196 AELLTLRSQLLTLCTPCMPDTYHERKQvlekELKHLREALQ----QTQQSHA-YLTQKREAQEEQLKKQQLLKQLRARIE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 680 GIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRA-LQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSR 758
Cdd:TIGR00618 271 ELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTeLQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTL 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 759 LLEQERWRVAAEKT---KAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMNKCG---EERRRLAAEWAEYF 832
Cdd:TIGR00618 351 HSQEIHIRDAHEVAtsiREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDtrtSAFRDLQGQLAHAK 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 833 TQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTVRACELRAKEEKLLAERE--ALERERQELRLEKDRLHKASL 910
Cdd:TIGR00618 431 KQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRkkAVVLARLLELQEEPCPLCGSC 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 911 RLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQrlqldrvRQEVP 990
Cdd:TIGR00618 511 IHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQC-------DNRSK 583
|
....*.
gi 1720365641 991 ASLPGL 996
Cdd:TIGR00618 584 EDIPNL 589
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
495-800 |
1.07e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 53.13 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 495 SLLPG--SGYQKQLLAAQGQLQS----STAQLQVELLQSQTKLSELEAQVRKLELER--AQHRMlleslqqrhqadlELI 566
Cdd:PRK10929 140 SQLPQqqTEARRQLNEIERRLQTlgtpNTPLAQAQLTALQAESAALKALVDELELAQlsANNRQ-------------ELA 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 567 edahRSRIKVLETSYQQREEQLRREKEVLSAQHAsycREAEQA--RAELvaqhqrqmaMAEQERDQEVARLRELQQASil 644
Cdd:PRK10929 207 ----RLRSELAKKRSQQLDAYLQALRNQLNSQRQ---REAERAleSTEL---------LAEQSGDLPKSIVAQFKINR-- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 645 EMRKDHEHQLQRLKMLKDQEIDAvTSATSHTR-SLNGIIEQMEKFSSSlNTLSsrveashlttsqqrelgirqqdEQLRA 723
Cdd:PRK10929 269 ELSQALNQQAQRMDLIASQQRQA-ASQTLQVRqALNTLREQSQWLGVS-NALG----------------------EALRA 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 724 LQERLGR----QQRDMEEERNRLQevigkmevRLSEQSrLLEQERwrvAAEKTKAESAQRTLEEQRKIMVQQIAMEREEL 799
Cdd:PRK10929 325 QVARLPEmpkpQQLDTEMAQLRVQ--------RLRYED-LLNKQP---QLRQIRQADGQPLTAEQNRILDAQLRTQRELL 392
|
.
gi 1720365641 800 E 800
Cdd:PRK10929 393 N 393
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
730-981 |
1.18e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.75 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 730 RQQRDMEEERNRLQEVIGKME---VRLSEQSRlleqerwrvAAEKTKAESAQRTlEEQRKIMVQQIAMEREELERAKSAL 806
Cdd:TIGR02168 179 RKLERTRENLDRLEDILNELErqlKSLERQAE---------KAERYKELKAELR-ELELALLVLRLEELREELEELQEEL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 807 LEEQksvmnkcgEERRRLAAEWAEYftQQKLSKERAEREAERAMHADSQREgtIISLTKEQAELTVRACELRAKEEKLL- 885
Cdd:TIGR02168 249 KEAE--------EELEELTAELQEL--EEKLEELRLEVSELEEEIEELQKE--LYALANEISRLEQQKQILRERLANLEr 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 886 ------AEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQE 959
Cdd:TIGR02168 317 qleeleAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
250 260
....*....|....*....|....
gi 1720365641 960 WL--RQQEQRVHQEHLSLAQQRLQ 981
Cdd:TIGR02168 397 SLnnEIERLEARLERLEDRRERLQ 420
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
518-980 |
1.36e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.61 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 518 AQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRH-QADLELIEDAhRSRIKVLETSYQQREEQLRREKEVLS 596
Cdd:COG4913 291 ELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIrGNGGDRLEQL-EREIERLERELEERERRRARLEALLA 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 597 AQHASYCREAE------QARAELVAQHQRQMAMAEQERDQEVARLRELQQA--------SILEMRKD--HEHQLQRLKML 660
Cdd:COG4913 370 ALGLPLPASAEefaalrAEAAALLEALEEELEALEEALAEAEAALRDLRRElreleaeiASLERRKSniPARLLALRDAL 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 661 KDQ----EIDA------VTSATSHTRSLNGIieqmEKFsssLNTLSSR--VEASHLttSQQRELgIRQQDEQLRALQERL 728
Cdd:COG4913 450 AEAlgldEAELpfvgelIEVRPEEERWRGAI----ERV---LGGFALTllVPPEHY--AAALRW-VNRLHLRGRLVYERV 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 729 GRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQE---RWRVAaektKAESAQRTLEEQRKIMVQ-QIAMEREELE---- 800
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAElgrRFDYV----CVDSPEELRRHPRAITRAgQVKGNGTRHEkddr 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 801 -------------RAKSALLEEQ----KSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREgtIISL 863
Cdd:COG4913 596 rrirsryvlgfdnRAKLAALEAElaelEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAERE--IAEL 673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 864 TKEQAELTVRACELRA---KEEKLLAEREALERERQELRLEKDRLHKaslRLQARAQEVEHMSKVASKKYEEGEQALQEA 940
Cdd:COG4913 674 EAELERLDASSDDLAAleeQLEELEAELEELEEELDELKGEIGRLEK---ELEQAEEELDELQDRLEAAEDLARLELRAL 750
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1720365641 941 QQMQNEQQGRLQVVQRQQEWLrQQEQRVHQEHLSLAQQRL 980
Cdd:COG4913 751 LEERFAAALGDAVERELRENL-EERIDALRARLNRAEEEL 789
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
523-984 |
1.68e-06 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 52.05 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 523 ELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDahrsRIKVLETSYQQREEQLRREKEVLSAQhasy 602
Cdd:pfam05557 3 ELIESKARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESD----RNQELQKRIRLLEKREAEAEEALREQ---- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 603 creAEQARAELvaQHQRQMAMAEQERDQEVARLRELQQASILEMRkdhehQLQRLKMLKDQEIDAVTSATSHTRSLNGII 682
Cdd:pfam05557 75 ---AELNRLKK--KYLEALNKKLNEKESQLADAREVISCLKNELS-----ELRRQIQRAELELQSTNSELEELQERLDLL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 683 E----QMEKFSSSLNT-LSSRVEASHLTTSQQRELGIRQQD-EQLRALQERLGRQQrDMEEERNRLQEVIGKMEvRLSEQ 756
Cdd:pfam05557 145 KakasEAEQLRQNLEKqQSSLAEAEQRIKELEFEIQSQEQDsEIVKNSKSELARIP-ELEKELERLREHNKHLN-ENIEN 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 757 SRLLEQErwrvaaektkAESAQRTLEEQRKIMVQQIAMEReELERAKSALLEEQKSVMNKCGEERRRLAAewAEYFTQQK 836
Cdd:pfam05557 223 KLLLKEE----------VEDLKRKLEREEKYREEAATLEL-EKEKLEQELQSWVKLAQDTGLNLRSPEDL--SRRIEQLQ 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 837 LSKERAEREAERAMHADSQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKDrLHKASLRLQARA 916
Cdd:pfam05557 290 QREIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERD-GYRAILESYDKE 368
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 917 QEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLQLDR 984
Cdd:pfam05557 369 LTMSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADP 436
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
504-771 |
2.00e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQssTAQLQVELL-----------QSQTKLSELEAQVRKLELERAQHRM-LLESLQQRHQADLELIEDAHR 571
Cdd:COG4913 235 DDLERAHEALE--DAREQIELLepirelaeryaAARERLAELEYLRAALRLWFAQRRLeLLEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 572 SRikvletsyQQREEQLRREKEVLSAQHAsycreaeQARAELVAQHQRQMAMAEQERDQEVARLRELQQasilemrkdhe 651
Cdd:COG4913 313 RL--------EARLDALREELDELEAQIR-------GNGGDRLEQLEREIERLERELEERERRRARLEA----------- 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 652 hQLQRLKMlkdqeidavtSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEAsHLTTSQQRELGIRQQDEQLRALQERLGRQ 731
Cdd:COG4913 367 -LLAALGL----------PLPASAEEFAALRAEAAALLEALEEELEALEE-ALAEAEAALRDLRRELRELEAEIASLERR 434
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1720365641 732 Q----RDMEEERNRLQEVIGKMEVRLSEQSRLLE----QERWRVAAEK 771
Cdd:COG4913 435 KsnipARLLALRDALAEALGLDEAELPFVGELIEvrpeEERWRGAIER 482
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
645-911 |
2.10e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 645 EMRKDHEHQLQRLKmlkdQEIDAVTSATSHTRS-LNGIIEQMEKFSSSLNTLSSRVeashlttsQQRELGIRQQDEQLRA 723
Cdd:COG4942 20 DAAAEAEAELEQLQ----QEIAELEKELAALKKeEKALLKQLAALERRIAALARRI--------RALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 724 LQERLGRQQRDMEEERNRLQEVIGKMEvRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAK 803
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELLRALY-RLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 804 SALLEEQKsvmnkcgeERRRLAAEWAEyfTQQKLSKERaereaeramhadSQREGTIISLTKEQAELTVRACELRAKEEK 883
Cdd:COG4942 167 AELEAERA--------ELEALLAELEE--ERAALEALK------------AERQKLLARLEKELAELAAELAELQQEAEE 224
|
250 260
....*....|....*....|....*...
gi 1720365641 884 LLAEREALERERQELRLEKDRLHKASLR 911
Cdd:COG4942 225 LEALIARLEAEAAAAAERTPAAGFAALK 252
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
511-920 |
2.37e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.96 E-value: 2.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 511 GQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHrSRIKVLETSYQQREEQLRR 590
Cdd:PRK02224 366 AELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELR-EREAELEATLRTARERVEE 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 591 EKEVLSAqhaSYCREAEQARAElvAQHqrqmAMAEQERDQEVARLrELQQASILEMRKDHEHQLQRLKMLKDQEidavts 670
Cdd:PRK02224 445 AEALLEA---GKCPECGQPVEG--SPH----VETIEEDRERVEEL-EAELEDLEEEVEEVEERLERAEDLVEAE------ 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 671 atshtrslngiiEQMEKFSSSLNTLSSRVEASHLTTSQQREL--GIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGK 748
Cdd:PRK02224 509 ------------DRIERLEERREDLEELIAERRETIEEKRERaeELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAE 576
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 749 MEVRLSEQSRLLEQERwRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERaksalLEEQKsvmnkcgEERRRLAAEw 828
Cdd:PRK02224 577 LNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREALAELNDERRER-----LAEKR-------ERKRELEAE- 642
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 829 aeyFTQQKLSKeraereaeramhADSQREgtiiSLTKEQAELTVRACELRAKEEKLLAEREALERE---RQELRLEKDRL 905
Cdd:PRK02224 643 ---FDEARIEE------------AREDKE----RAEEYLEQVEEKLDELREERDDLQAEIGAVENEleeLEELRERREAL 703
|
410
....*....|....*
gi 1720365641 906 HKASLRLQARAQEVE 920
Cdd:PRK02224 704 ENRVEALEALYDEAE 718
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
533-827 |
2.62e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.84 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 533 ELEAQVRKL-----ELERAqHRMLLESLQQRHQadLELIEDAHRSRIKVLETSYQQREEQLRREKEVLSAQHASYCREAE 607
Cdd:COG4913 222 DTFEAADALvehfdDLERA-HEALEDAREQIEL--LEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 608 QARAELvAQHQRQMAMAEQERDQEVARLRELQQAsILEmrkdheHQLQRLKMLKDQeidavtsatshtrslngiIEQMEK 687
Cdd:COG4913 299 ELRAEL-ARLEAELERLEARLDALREELDELEAQ-IRG------NGGDRLEQLERE------------------IERLER 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 688 fssslntlssrveashltTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGkmevRLSEQSRLLEQERWRV 767
Cdd:COG4913 353 ------------------ELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLE----ALEEELEALEEALAEA 410
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 768 AAEKTKAESAQRTLEEqrkimvqqiamEREELERAKSALLEEQKSVmnkcgeeRRRLAAE 827
Cdd:COG4913 411 EAALRDLRRELRELEA-----------EIASLERRKSNIPARLLAL-------RDALAEA 452
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
701-959 |
5.29e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 5.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 701 ASHLTTSQQREL-GIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQR 779
Cdd:COG4942 18 QADAAAEAEAELeQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 780 TLEEQRKIMVQQIAMEREELERAKSALLEEQKSVmnkcGEERRRLaaEWAEYFTQQklskeraereaeramhadsqregt 859
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDF----LDAVRRL--QYLKYLAPA------------------------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 860 iislTKEQAEltvracELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQE 939
Cdd:COG4942 148 ----RREQAE------ELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217
|
250 260
....*....|....*....|
gi 1720365641 940 AQQMQNEQQGRLQVVQRQQE 959
Cdd:COG4942 218 LQQEAEELEALIARLEAEAA 237
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
510-983 |
5.82e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 5.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 510 QGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLE--TSYQQREEQ 587
Cdd:TIGR02169 289 QLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEeyAELKEELED 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 588 LRREKEVLSAQHASYCREAEQARAELvAQHQRQMAMAEQERDQEVARLRELQQAsILEMRKDHEHQLQRLKMLKDQEIDA 667
Cdd:TIGR02169 369 LRAELEEVDKEFAETRDELKDYREKL-EKLKREINELKRELDRLQEELQRLSEE-LADLNAAIAGIEAKINELEEEKEDK 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 668 VTSATSHTRSLNGIIEQMEKFSSSLNTLS-----------------SRVEAShLTTSQQRELGIRQQDEQLRA-LQERLG 729
Cdd:TIGR02169 447 ALEIKKQEWKLEQLAADLSKYEQELYDLKeeydrvekelsklqrelAEAEAQ-ARASEERVRGGRAVEEVLKAsIQGVHG 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 730 --RQQRDMEEER---------NRLQEV---------------------------IGKMEVRLSEQSRLLEQERWRVAAE- 770
Cdd:TIGR02169 526 tvAQLGSVGERYataievaagNRLNNVvveddavakeaiellkrrkagratflpLNKMRDERRDLSILSEDGVIGFAVDl 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 771 ---KTKAESA----------QRTLEEQRKIM---------------------------------------VQQIAMEREE 798
Cdd:TIGR02169 606 vefDPKYEPAfkyvfgdtlvVEDIEAARRLMgkyrmvtlegelfeksgamtggsraprggilfsrsepaeLQRLRERLEG 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 799 LERAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQK-LSKERAEREAERAMHADSQREGTIIS--LTKEQAELTVRAC 875
Cdd:TIGR02169 686 LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKeIEQLEQEEEKLKERLEELEEDLSSLEqeIENVKSELKELEA 765
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 876 ELRAKEEKLLAEREALE-------RER-QELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQ 947
Cdd:TIGR02169 766 RIEELEEDLHKLEEALNdlearlsHSRiPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDL 845
|
570 580 590
....*....|....*....|....*....|....*.
gi 1720365641 948 QGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLQLD 983
Cdd:TIGR02169 846 KEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
503-701 |
5.82e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 5.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRhqadLELIEDahrsRIKVLETSYQ 582
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE----LAALEA----ELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 583 QREEQLRREKEVLSAQHASYCREAEQARAEL-------------------VAQHQRQMAMAEQERDQEVARLREL---QQ 640
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALllspedfldavrrlqylkyLAPARREQAEELRADLAELAALRAEleaER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720365641 641 ASILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEA 701
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
582-803 |
6.75e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 6.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 582 QQREEQLRREKEVLSAQHASYCREAEQARAELVAQhQRQMAMAEQERDQEVARLRELQQaSILEMRKDHEHQLQRLKMLK 661
Cdd:COG4942 33 QQEIAELEKELAALKKEEKALLKQLAALERRIAAL-ARRIRALEQELAALEAELAELEK-EIAELRAELEAQKEELAELL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 662 dqeidavtsATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQREL-GIRQQDEQLRALQERLGRQQRDMEEERN 740
Cdd:COG4942 111 ---------RALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAeELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720365641 741 RLQEVIGKMEVRLSEQSRLLEQerwrVAAEKTKAESAQRTLEEQRKIMVQQIA-MEREELERAK 803
Cdd:COG4942 182 ELEEERAALEALKAERQKLLAR----LEKELAELAAELAELQQEAEELEALIArLEAEAAAAAE 241
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
528-981 |
7.78e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.04 E-value: 7.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 528 QTKLSELEAQVRKLELERAQHRMLLEslqqrhqaDLELIEDAHRSRikvletsyQQREEQLRREKEVLSAQHASYCREAE 607
Cdd:PRK02224 212 ESELAELDEEIERYEEQREQARETRD--------EADEVLEEHEER--------REELETLEAEIEDLRETIAETERERE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 608 QARAElVAQHQRQMAMAEQERDQEVAR--LRELQQASILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQM 685
Cdd:PRK02224 276 ELAEE-VRDLRERLEELEEERDDLLAEagLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 686 EKFSSSLN----TLSSRVEASHLTTSQQRElGIRQQDEQLRALQERLGRQQRDME----------EERNRLQEVIGKMEV 751
Cdd:PRK02224 355 EERAEELReeaaELESELEEAREAVEDRRE-EIEELEEEIEELRERFGDAPVDLGnaedfleelrEERDELREREAELEA 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 752 -------RLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKimvqqiamEREELERAKSALLEEQKSVMNKC--GEERR 822
Cdd:PRK02224 434 tlrtareRVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRE--------RVEELEAELEDLEEEVEEVEERLerAEDLV 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 823 RLAAEWAEYFTQQKLSKERAEREAERamhADSQREgTIISLTKEQAELTVRACELRAKEEKLLAERE-------ALERER 895
Cdd:PRK02224 506 EAEDRIERLEERREDLEELIAERRET---IEEKRE-RAEELRERAAELEAEAEEKREAAAEAEEEAEeareevaELNSKL 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 896 QELRLEKDRLHKASLRLQARAQEVEHMSKVASKkyeegeqaLQEAQQMQNEQQGRLqvvQRQQEWLRQQEQRVHQEHLSL 975
Cdd:PRK02224 582 AELKERIESLERIRTLLAAIADAEDEIERLREK--------REALAELNDERRERL---AEKRERKRELEAEFDEARIEE 650
|
....*.
gi 1720365641 976 AQQRLQ 981
Cdd:PRK02224 651 AREDKE 656
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
545-951 |
9.42e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 9.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 545 RAQHRMLLESLQQRHQADLEliedahrSRIKVLETSYQQREEQLRRE-----KEVLSAQHASYCREAEQARAEL----VA 615
Cdd:pfam12128 196 RDVKSMIVAILEDDGVVPPK-------SRLNRQQVEHWIRDIQAIAGimkirPEFTKLQQEFNTLESAELRLSHlhfgYK 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 616 QHQRQMAMAEQERDQEVARLRELqqasiLEMRKDhehQLQRLKMLKDQEIDAVTSATSHTRS-LNGIIEQMEKFssslnt 694
Cdd:pfam12128 269 SDETLIASRQEERQETSAELNQL-----LRTLDD---QWKEKRDELNGELSAADAAVAKDRSeLEALEDQHGAF------ 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 695 LSSRVEASHLttSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGkmevrlSEQSRLLEQERWRVAAEKtka 774
Cdd:pfam12128 335 LDADIETAAA--DQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK------EQNNRDIAGIKDKLAKIR--- 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 775 ESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMNKCGEERRRLAAewaeyftqqklskeraereaeramhads 854
Cdd:pfam12128 404 EARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQ---------------------------- 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 855 qreGTIISLTKEQAELTVRACE-LRAKEEKLLAEREALERERQELRLEKDrlhKASLRLQaraqevehmskVASKKYEEG 933
Cdd:pfam12128 456 ---ATATPELLLQLENFDERIErAREEQEAANAEVERLQSELRQARKRRD---QASEALR-----------QASRRLEER 518
|
410
....*....|....*...
gi 1720365641 934 EQALQEAQQMQNEQQGRL 951
Cdd:pfam12128 519 QSALDELELQLFPQAGTL 536
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
670-988 |
9.60e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.96 E-value: 9.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 670 SATSHTRSLNGIIEQMEKFSSSLNTLSSRVEAshlttsQQRELGIRQQDEQlrALQERLGRQQRDM--EEERNRLQEVIG 747
Cdd:PRK04863 287 EALELRRELYTSRRQLAAEQYRLVEMARELAE------LNEAESDLEQDYQ--AASDHLNLVQTALrqQEKIERYQADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 748 KMEVRLSEQSRLLEQERWRVAAEKTKAESA--------------QRTLEEQRKIMVQ-QIAMEReeLERAKSALLEEQKS 812
Cdd:PRK04863 359 ELEERLEEQNEVVEEADEQQEENEARAEAAeeevdelksqladyQQALDVQQTRAIQyQQAVQA--LERAKQLCGLPDLT 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 813 VMNkcgeerrrlAAEWAEYFTQQKLSKERAEREAERAMH----ADSQREGTIISLTK-------EQAELTVRACELRAKE 881
Cdd:PRK04863 437 ADN---------AEDWLEEFQAKEQEATEELLSLEQKLSvaqaAHSQFEQAYQLVRKiagevsrSEAWDVARELLRRLRE 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 882 EKLLAER-EALERERQELRlekdrlhkASLRLQARAQEvehMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEW 960
Cdd:PRK04863 508 QRHLAEQlQQLRMRLSELE--------QRLRQQQRAER---LLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSE 576
|
330 340
....*....|....*....|....*...
gi 1720365641 961 LRQQEQRVHQEHLSLAQQRLQLDRVRQE 988
Cdd:PRK04863 577 ARERRMALRQQLEQLQARIQRLAARAPA 604
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
502-998 |
1.21e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.45 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 502 YQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLElerAQHRMLL-ESLQQRH---------QADLELIEdahr 571
Cdd:pfam12128 288 LNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALE---DQHGAFLdADIETAAadqeqlpswQSELENLE---- 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 572 SRIKVLETSYQQREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRKDHE 651
Cdd:pfam12128 361 ERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEY 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 652 HQLQRLKMLKDQeIDAVTsATSHTrslngiIEQMEKFSSSLNTLSSRVEASHLTTSQ-QRELgiRQQDEQLRALQERLGR 730
Cdd:pfam12128 441 RLKSRLGELKLR-LNQAT-ATPEL------LLQLENFDERIERAREEQEAANAEVERlQSEL--RQARKRRDQASEALRQ 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 731 QQRDMEEERNRLQEVI-------GKMEVRLSEQSRLLEQERWRVAAE----KTKAESAQRTLEEQRKIMVQQIAMEREEL 799
Cdd:pfam12128 511 ASRRLEERQSALDELElqlfpqaGTLLHFLRKEAPDWEQSIGKVISPellhRTDLDPEVWDGSVGGELNLYGVKLDLKRI 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 800 ERAKSALLEEQKsvmnkcgeeRRRLAAEWAEYFTQQKLSKEraereaeramhADSQREGTIISLTKEQAELTVRACELRA 879
Cdd:pfam12128 591 DVPEWAASEEEL---------RERLDKAEEALQSAREKQAA-----------AEEQLVQANGELEKASREETFARTALKN 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 880 KeekllaeREALERERQELRLEKDRLHKASLRLQARAQE----VEHMSKVASKKYEEGEQALQE-AQQMQNEQQGRLQVV 954
Cdd:pfam12128 651 A-------RLDLRRLFDEKQSEKDKKNKALAERKDSANErlnsLEAQLKQLDKKHQAWLEEQKEqKREARTEKQAYWQVV 723
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1720365641 955 qrqQEWLRQQEQRVHQEHLSL-AQQRLQLDRVRQEVPASLPGLPP 998
Cdd:pfam12128 724 ---EGALDAQLALLKAAIAARrSGAKAELKALETWYKRDLASLGV 765
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
503-971 |
1.28e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTA---QLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLET 579
Cdd:TIGR00618 385 QQQKTTLTQKLQSLCKeldILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQES 464
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 580 SYQQREE-QLRREKEVLSAQHASYCREAEQaRAELVAQHQRQMAMAEQERDQEVARLREL------------QQASILEM 646
Cdd:TIGR00618 465 AQSLKEReQQLQTKEQIHLQETRKKAVVLA-RLLELQEEPCPLCGSCIHPNPARQDIDNPgpltrrmqrgeqTYAQLETS 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 647 RKDHEHQLQ----RLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELgirqQDEQLR 722
Cdd:TIGR00618 544 EEDVYHQLTserkQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACE----QHALLR 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 723 ALQERLGRQQRDMEEERnrLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKI-----MVQQIAMERE 797
Cdd:TIGR00618 620 KLQPEQDLQDVRLHLQQ--CSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALqkmqsEKEQLTYWKE 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 798 ELERAKSALLEEQKSVmnkcgEERRRLAAEWaeyftQQKLSKERAEREAERAMHADSQREGTIISLT--KEQAELTVRAC 875
Cdd:TIGR00618 698 MLAQCQTLLRELETHI-----EEYDREFNEI-----ENASSSLGSDLAAREDALNQSLKELMHQARTvlKARTEAHFNNN 767
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 876 ELRAKEEKLLAEREALERERQ-ELRLEKDRLHKASLRLQARAQEVEHMSKV-------ASKKYEEGEQALQEAQQMQNE- 946
Cdd:TIGR00618 768 EEVTAALQTGAELSHLAAEIQfFNRLREEDTHLLKTLEAEIGQEIPSDEDIlnlqcetLVQEEEQFLSRLEEKSATLGEi 847
|
490 500
....*....|....*....|....*..
gi 1720365641 947 --QQGRLQVVQRQQEWLRQQEQRVHQE 971
Cdd:TIGR00618 848 thQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
521-746 |
1.29e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.35 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 521 QVELLQSQTKLSELEaQVRKLELERAQHRML-LESLQQRHQADLELI--EDAHRSRIKVLETSYQQREEQLRREKEVLSA 597
Cdd:pfam17380 349 ELERIRQEERKRELE-RIRQEEIAMEISRMReLERLQMERQQKNERVrqELEAARKVKILEEERQRKIQQQKVEMEQIRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 598 QHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLR---ELQQASILEMRKDHEHQL---QRLKMLKDQEIDAVTSA 671
Cdd:pfam17380 428 EQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRqqeEERKRKKLELEKEKRDRKraeEQRRKILEKELEERKQA 507
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720365641 672 TSHTRSLNGIIE-QMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRdMEEERNRLQEVI 746
Cdd:pfam17380 508 MIEEERKRKLLEkEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEA-MEREREMMRQIV 582
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
708-956 |
1.63e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 708 QQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGK-MEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRK 786
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKnGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 787 IMVQQIAMEREELERAKsalleeQKSVMNKCGEERRRLAAEWAEYftQQKLSKEraereaeramHADsqregtIISLTKE 866
Cdd:COG3206 244 ALRAQLGSGPDALPELL------QSPVIQQLRAQLAELEAELAEL--SARYTPN----------HPD------VIALRAQ 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 867 QAELTVR-ACELRAKEEKLLAEREALERERQELRLEKDRLHKASLRL---QARAQEVEHMSKVASKKYEEGEQALQEAQQ 942
Cdd:COG3206 300 IAALRAQlQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELpelEAELRRLEREVEVARELYESLLQRLEEARL 379
|
250
....*....|....
gi 1720365641 943 MQNEQQGRLQVVQR 956
Cdd:COG3206 380 AEALTVGNVRVIDP 393
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
520-950 |
2.21e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 520 LQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSYQQREeQLRR---EKEVLS 596
Cdd:pfam15921 108 LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIE-QLRKmmlSHEGVL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 597 AQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVAR-LRELQ-QASILEMRK-DHEHQLQRLK--------MLKDQEI 665
Cdd:pfam15921 187 QEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAISKiLRELDtEISYLKGRIfPVEDQLEALKsesqnkieLLLQQHQ 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 666 DAVTSATS-HTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDE------QLRALQERLGRQQRDMEEE 738
Cdd:pfam15921 267 DRIEQLISeHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDlestvsQLRSELREAKRMYEDKIEE 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 739 RNRlQEVIGKMEV--------RLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRK----------IMVQQIAMEREELE 800
Cdd:pfam15921 347 LEK-QLVLANSELtearterdQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKrlwdrdtgnsITIDHLRRELDDRN 425
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 801 RAKSALLEEQKSVMNKC-GEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTV------- 872
Cdd:pfam15921 426 MEVQRLEALLKAMKSECqGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVsdltasl 505
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 873 ----RACELRAKEEKLLAEREALE-RERQELRLEKDRLHKA-----SLRLQARA---------QEVEHMSKVASKKYEEG 933
Cdd:pfam15921 506 qekeRAIEATNAEITKLRSRVDLKlQELQHLKNEGDHLRNVqteceALKLQMAEkdkvieilrQQIENMTQLVGQHGRTA 585
|
490
....*....|....*..
gi 1720365641 934 EQALQEAQQMQNEQQGR 950
Cdd:pfam15921 586 GAMQVEKAQLEKEINDR 602
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
574-953 |
2.31e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 48.89 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 574 IKVLETSYQQREEQLRREKEVLSAQ--HASYCREAEQARAELVAQHqrqmamAEQERDQEVARLRELQQASILEMRKDHE 651
Cdd:TIGR00606 185 IKALETLRQVRQTQGQKVQEHQMELkyLKQYKEKACEIRDQITSKE------AQLESSREIVKSYENELDPLKNRLKEIE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 652 HQLQRLKMLKDQeidavtsatshTRSLNGIIEQMEKFSSSLntlssrveashlttSQQRELGIRQQDEQLRALQERLGRQ 731
Cdd:TIGR00606 259 HNLSKIMKLDNE-----------IKALKSRKKQMEKDNSEL--------------ELKMEKVFQGTDEQLNDLYHNHQRT 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 732 QRDMEEERNRLQEVIGKmevrLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQ---RKIMVQQIAMEREELERAKSALLE 808
Cdd:TIGR00606 314 VREKERELVDCQRELEK----LNKERRLLNQEKTELLVEQGRLQLQADRHQEHiraRDSLIQSLATRLELDGFERGPFSE 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 809 EQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTIIS-----LTKEQAELTVRACELR---AK 880
Cdd:TIGR00606 390 RQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIElkkeiLEKKQEELKFVIKELQqleGS 469
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720365641 881 EEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEgeqalQEAQQMQNEQQGRLQV 953
Cdd:TIGR00606 470 SDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLD-----QEMEQLNHHTTTRTQM 537
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
518-801 |
2.71e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.50 E-value: 2.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 518 AQLQVELLQSQTKLSELEAQVRKLE-LERAQHRmlLESLQQRHQADLELIEDaHRSRIKvletSYQQREEQLRREKEVLS 596
Cdd:PRK02224 478 EELEAELEDLEEEVEEVEERLERAEdLVEAEDR--IERLEERREDLEELIAE-RRETIE----EKRERAEELRERAAELE 550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 597 AQhASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQ-ASILEMRKDHEHQLQRLKmlkdQEIDAVTSATSHT 675
Cdd:PRK02224 551 AE-AEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERiRTLLAAIADAEDEIERLR----EKREALAELNDER 625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 676 RslngiiEQMEKFSSSLNTLSSRVEASHLTTSQQRelgiRQQDEQLralQERLGRQQRDMEEERNRLQEVIGKMEVRLSE 755
Cdd:PRK02224 626 R------ERLAEKRERKRELEAEFDEARIEEARED----KERAEEY---LEQVEEKLDELREERDDLQAEIGAVENELEE 692
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1720365641 756 QSRL------LEQERWRVAAEKTKAESAQRTLEEQRKIMVQQiamEREELER 801
Cdd:PRK02224 693 LEELrerreaLENRVEALEALYDEAEELESMYGDLRAELRQR---NVETLER 741
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
496-645 |
4.34e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.70 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 496 LLPGSGYQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLEL---ERAQHRMLLESLQQRHQADLELIE----- 567
Cdd:COG3206 207 LVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDalpELLQSPVIQQLRAQLAELEAELAElsary 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 568 -DAH------RSRIKVLETSYQQREEQ----LRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVAR-- 634
Cdd:COG3206 287 tPNHpdvialRAQIAALRAQLQQEAQRilasLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARel 366
|
170
....*....|....*
gi 1720365641 635 ----LRELQQASILE 645
Cdd:COG3206 367 yeslLQRLEEARLAE 381
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
867-947 |
4.49e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.47 E-value: 4.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 867 QAELTVRACELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNE 946
Cdd:PRK12704 74 EKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAE 153
|
.
gi 1720365641 947 Q 947
Cdd:PRK12704 154 E 154
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
685-979 |
4.93e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.41 E-value: 4.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 685 MEKFSSSLNTLSSRVEASHLttsqQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQER 764
Cdd:pfam05483 192 IEKMILAFEELRVQAENARL----EMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESR 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 765 WRVAA--EKTKAESaqrtleEQRKIMVQQIAMEREELERAKSALleeQKSV-MNKCGEERRRLAAEWAEYFTQQKLSKER 841
Cdd:pfam05483 268 DKANQleEKTKLQD------ENLKELIEKKDHLTKELEDIKMSL---QRSMsTQKALEEDLQIATKTICQLTEEKEAQME 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 842 aereaeramhaDSQREGTIISLTKEQAELTVraCELRakeekllaerEALERERQELRLEKDRLHKASLRLQARAQEVEH 921
Cdd:pfam05483 339 -----------ELNKAKAAHSFVVTEFEATT--CSLE----------ELLRTEQQRLEKNEDQLKIITMELQKKSSELEE 395
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 922 MSKVASKKyeegEQALQEAQQMQNEQQgRLQVVQRQQEWLRQQEQRVHQEHLSLAQQR 979
Cdd:pfam05483 396 MTKFKNNK----EVELEELKKILAEDE-KLLDEKKQFEKIAEELKGKEQELIFLLQAR 448
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
504-906 |
5.62e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.64 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVE---LLQSQTKLSELEAQVRKLE---------LERAQHRMLLESLQQRHQADLELIEDAHR 571
Cdd:PRK04863 286 EEALELRRELYTSRRQLAAEqyrLVEMARELAELNEAESDLEqdyqaasdhLNLVQTALRQQEKIERYQADLEELEERLE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 572 SRIKVLETSYQQREEQLRR----EKEVLS--AQHASYCR--EAEQARAElvaqhQRQMAMAEQERDQEVARLRELQQASI 643
Cdd:PRK04863 366 EQNEVVEEADEQQEENEARaeaaEEEVDElkSQLADYQQalDVQQTRAI-----QYQQAVQALERAKQLCGLPDLTADNA 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 644 ---LEMRKDHEHQL-QRLKMLKDQEIDAVTSATSHT------RSLNGIIEQMEKFSSSLNTLSSRVEASHLTtsqQRELG 713
Cdd:PRK04863 441 edwLEEFQAKEQEAtEELLSLEQKLSVAQAAHSQFEqayqlvRKIAGEVSRSEAWDVARELLRRLREQRHLA---EQLQQ 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 714 IRQQdeqLRALQERLgRQQRDMEEERNRLQEVIGKMEVRLSEQSRLL-EQERWRVAAEKTKAESAQRTLEEQRKImvQQI 792
Cdd:PRK04863 518 LRMR---LSELEQRL-RQQQRAERLLAEFCKRLGKNLDDEDELEQLQeELEARLESLSESVSEARERRMALRQQL--EQL 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 793 AMEREELERaksalleeqksvmnkcgeerrrLAAEWAEYftQQKLSKERAEREAERamhADSQRegtIISLTKEQAEltv 872
Cdd:PRK04863 592 QARIQRLAA----------------------RAPAWLAA--QDALARLREQSGEEF---EDSQD---VTEYMQQLLE--- 638
|
410 420 430
....*....|....*....|....*....|....
gi 1720365641 873 racelraKEEKLLAEREALERERQELRLEKDRLH 906
Cdd:PRK04863 639 -------RERELTVERDELAARKQALDEEIERLS 665
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
504-951 |
5.68e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.37 E-value: 5.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLqqrhqadlelieDAHRSRIKVLETSYQQ 583
Cdd:PRK03918 182 EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL------------EELKEEIEELEKELES 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 584 REEQLRREKEVLsaqhasycREAEQARAELVAQhqrqmamaEQERDQEVARLRELQQAS-----ILEMRKDHEHQLQRLK 658
Cdd:PRK03918 250 LEGSKRKLEEKI--------RELEERIEELKKE--------IEELEEKVKELKELKEKAeeyikLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 659 MLKdqeidavtsaTSHTRSLNGIIEQMEKfsssLNTLSSRVEashlttsqqrELgirqqDEQLRALQERLGRqqrdMEEE 738
Cdd:PRK03918 314 KRL----------SRLEEEINGIEERIKE----LEEKEERLE----------EL-----KKKLKELEKRLEE----LEER 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 739 RNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSAL--LEEQKSVMNK 816
Cdd:PRK03918 361 HELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIeeLKKAKGKCPV 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 817 CG-----EERRRLAAEWAEyftqqKLSKERAEREAERAMHADSQREGTII-SLTKEQAELTVR---ACELRAKEEKLLA- 886
Cdd:PRK03918 441 CGrelteEHRKELLEEYTA-----ELKRIEKELKEIEEKERKLRKELRELeKVLKKESELIKLkelAEQLKELEEKLKKy 515
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720365641 887 EREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKyEEGEQALQEAQQMQNEQQGRL 951
Cdd:PRK03918 516 NLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKL-AELEKKLDELEEELAELLKEL 579
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
521-1013 |
6.23e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 6.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 521 QVELLQSQ-TKLSELEAQVRKLeleRAQHRML--LESLQQRHQADLELIE--DAHRSRIKVLETsyQQREEQLRREKEVL 595
Cdd:COG4913 226 AADALVEHfDDLERAHEALEDA---REQIELLepIRELAERYAAARERLAelEYLRAALRLWFA--QRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 596 SAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQAsILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHT 675
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLERE-IERLERELEERERRRARLEALLAALGLPLPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 676 RSLNGIIEQMEKFSSSLNTLSSRVEAsHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEE----RNRLQEVIGKMEV 751
Cdd:COG4913 380 EEFAALRAEAAALLEALEEELEALEE-ALAEAEAALRDLRRELRELEAEIASLERRKSNIPARllalRDALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 752 RLSEQSRLLE----QERWRVAAEKT----------------KAESAQRTLEEQRKIMVQQIAMEREELERAK---SALLE 808
Cdd:COG4913 459 ELPFVGELIEvrpeEERWRGAIERVlggfaltllvppehyaAALRWVNRLHLRGRLVYERVRTGLPDPERPRldpDSLAG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 809 EQKSvmnKCGEERRRLAAEWAEYF------TQQKLSKERAEREAERAMHADSQR-----EGTIISL------TKEQAElt 871
Cdd:COG4913 539 KLDF---KPHPFRAWLEAELGRRFdyvcvdSPEELRRHPRAITRAGQVKGNGTRhekddRRRIRSRyvlgfdNRAKLA-- 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 872 vracELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVAS--KKYEEGEQALQEAQQMQNEqqg 949
Cdd:COG4913 614 ----ALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASaeREIAELEAELERLDASSDD--- 686
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720365641 950 rLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLQLDRVRQEVPASLPGLPPRVQGPAASSRDAVQA 1013
Cdd:COG4913 687 -LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRA 749
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
504-980 |
6.63e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 47.04 E-value: 6.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQT----KLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRsRIKVLET 579
Cdd:pfam05557 82 KKYLEALNKKLNEKESQLADAREVISclknELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQ-LRQNLEK 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 580 SYQQREEQLRREKEvLSAQHASYcreaEQARAELVAQHQRQMAMAEQERDQE-----VARLRELQQASIL--EMRKDHEH 652
Cdd:pfam05557 161 QQSSLAEAEQRIKE-LEFEIQSQ----EQDSEIVKNSKSELARIPELEKELErlrehNKHLNENIENKLLlkEEVEDLKR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 653 QLQRLKMLKDQEIDA--------------VTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQD 718
Cdd:pfam05557 236 KLEREEKYREEAATLelekekleqelqswVKLAQDTGLNLRSPEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRE 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 719 eqlraLQERLGRQQRDMEEERNRLQEVIGKMEvRLSEQSRLLEQERWRVAA-------EKTKAESAQRTLEEQRKI--MV 789
Cdd:pfam05557 316 -----LEQELAQYLKKIEDLNKKLKRHKALVR-RLQRRVLLLTKERDGYRAilesydkELTMSNYSPQLLERIEEAedMT 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 790 QQIAMEREELERAKSALLEEQKSVMNKCGEERRRLaaewaeyftqQKLSKERAereaeramHADSqregtiiSLTKEQAE 869
Cdd:pfam05557 390 QKMQAHNEEMEAQLSVAEEELGGYKQQAQTLEREL----------QALRQQES--------LADP-------SYSKEEVD 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 870 ltvracELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYeegeQALQEAQQMQNEQQG 949
Cdd:pfam05557 445 ------SLRRKLETLELERQRLREQKNELEMELERRCLQGDYDPKKTKVLHLSMNPAAEAY----QQRKNQLEKLQAEIE 514
|
490 500 510
....*....|....*....|....*....|.
gi 1720365641 950 RLQVVQRQQEWLRQQEQRVHQEHLSLAQQRL 980
Cdd:pfam05557 515 RLKRLLKKLEDDLEQVLRLPETTSTMNFKEV 545
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
503-897 |
8.87e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.64 E-value: 8.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQV-----RKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVL 577
Cdd:pfam05483 362 EELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTkfknnKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQEL 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 578 ETSYQQREEQ---LRREKEVLSAQHASYCREAEQARAEL---------VAQHQRQMAMAEQERDQEVARLR-EL--QQAS 642
Cdd:pfam05483 442 IFLLQAREKEihdLEIQLTAIKTSEEHYLKEVEDLKTELekeklknieLTAHCDKLLLENKELTQEASDMTlELkkHQED 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 643 ILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLngiIEQMEKFSSSLNTlSSRVEASHLTTSQQRELGIRQQDEQLR 722
Cdd:pfam05483 522 IINCKKQEERMLKQIENLEEKEMNLRDELESVREEF---IQKGDEVKCKLDK-SEENARSIEYEVLKKEKQMKILENKCN 597
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 723 ALQERLGRQQRDMEEernrLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEE-----QRKIMVQQIAMER- 796
Cdd:pfam05483 598 NLKKQIENKNKNIEE----LHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEiidnyQKEIEDKKISEEKl 673
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 797 -EELERAKSALLEE---QKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTV 872
Cdd:pfam05483 674 lEEVEKAKAIADEAvklQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKA 753
|
410 420
....*....|....*....|....*
gi 1720365641 873 RACELRAKEEKLLAEREALERERQE 897
Cdd:pfam05483 754 ELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
517-741 |
9.77e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 9.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 517 TAQLQVELLQSQtkLSELEAQVRKLELERAQHRMLLESLQQRHQAdLELIEDAHRSRIKVLetSYQQREEQLRREKEVLS 596
Cdd:COG4913 607 DNRAKLAALEAE--LAELEEELAEAEERLEALEAELDALQERREA-LQRLAEYSWDEIDVA--SAEREIAELEAELERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 597 AQHASYcREAEQARAELVAQHQRqmamAEQERDQEVARLRELQQAsilemRKDHEHQLQRlkmLKDQEIDAVTSATSHTR 676
Cdd:COG4913 682 ASSDDL-AALEEQLEELEAELEE----LEEELDELKGEIGRLEKE-----LEQAEEELDE---LQDRLEAAEDLARLELR 748
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720365641 677 SLngiieqmekfssslntLSSRVEASHLTTSQQRELgiRQQDEQLRALQERLGRQQRDMEEERNR 741
Cdd:COG4913 749 AL----------------LEERFAAALGDAVERELR--ENLEERIDALRARLNRAEEELERAMRA 795
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
582-938 |
1.04e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 582 QQREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMaeqERDQEVARLRElqqasilemrkdhEHQLQRLKMLK 661
Cdd:pfam17380 303 QEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM---ERERELERIRQ-------------EERKRELERIR 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 662 DQEIDAVTSATSHTRSLngiieQMEKfssslntlssrveashlttsQQRELGIRQQDEQlralqerlGRQQRDMEEERNR 741
Cdd:pfam17380 367 QEEIAMEISRMRELERL-----QMER--------------------QQKNERVRQELEA--------ARKVKILEEERQR 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 742 -LQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSvmNKCGEE 820
Cdd:pfam17380 414 kIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRD--RKRAEE 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 821 RRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQRegtiiSLTKEQaeltvracELRAKEEKLLAEREALERERQELRL 900
Cdd:pfam17380 492 QRRKILEKELEERKQAMIEEERKRKLLEKEMEERQK-----AIYEEE--------RRREAEEERRKQQEMEERRRIQEQM 558
|
330 340 350
....*....|....*....|....*....|....*...
gi 1720365641 901 EKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQ 938
Cdd:pfam17380 559 RKATEERSRLEAMEREREMMRQIVESEKARAEYEATTP 596
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
523-946 |
1.13e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.21 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 523 ELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSyqQREEQLRREKEVLSAQHASY 602
Cdd:PRK03918 287 ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELK--KKLKELEKRLEELEERHELY 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 603 creaEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASiLEMRKDHEHQLQRLKMLKDQE------IDAVTSA----- 671
Cdd:PRK03918 365 ----EEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAK-EEIEEEISKITARIGELKKEIkelkkaIEELKKAkgkcp 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 672 ---------------TSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQREL-GIRQQDEQLRALQERLG------ 729
Cdd:PRK03918 440 vcgrelteehrkellEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELiKLKELAEQLKELEEKLKkynlee 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 730 --RQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERwrvaaEKTKAESAQRTLEEQRKIM-----------VQQIAMER 796
Cdd:PRK03918 520 leKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKK-----KLAELEKKLDELEEELAELlkeleelgfesVEELEERL 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 797 EELERAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTiislTKEQAELTVRACE 876
Cdd:PRK03918 595 KELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS----EEEYEELREEYLE 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 877 LRAKEEKLLAEREALERERQE-------LRLEKDRLHKASLRLQ----ARAQEVEHMSKVASKKYEEGEQALQEAQQMQN 945
Cdd:PRK03918 671 LSRELAGLRAELEELEKRREEikktlekLKEELEEREKAKKELEklekALERVEELREKVKKYKALLKERALSKVGEIAS 750
|
.
gi 1720365641 946 E 946
Cdd:PRK03918 751 E 751
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
563-945 |
1.18e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.50 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 563 LELIEDAHRSRIKVLETsyqQREEQLRREKEVLsAQHASYCREAEQARAELVAQHQRQMAmAEQERDQEVARLRELQQAS 642
Cdd:pfam02463 156 LEIEEEAAGSRLKRKKK---EALKKLIEETENL-AELIIDLEELKLQELKLKEQAKKALE-YYQLKEKLELEEEYLLYLD 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 643 ILEMRKDHEHQLQRLKMLKDQEIDavtsatshtrSLNGIIEQMEKfssslntlssrveashlttSQQRELGIRQQDEQLR 722
Cdd:pfam02463 231 YLKLNEERIDLLQELLRDEQEEIE----------SSKQEIEKEEE-------------------KLAQVLKENKEEEKEK 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 723 ALQER-----------LGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERwRVAAEKTKAESAQRTLEEQRKIMVQQ 791
Cdd:pfam02463 282 KLQEEelkllakeeeeLKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEK-EEIEELEKELKELEIKREAEEEEEEE 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 792 IAMEREELERAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSqregTIISLTKEQAELT 871
Cdd:pfam02463 361 LEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKE----EKKEELEILEEEE 436
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720365641 872 VRACELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQN 945
Cdd:pfam02463 437 ESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLK 510
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
509-800 |
1.87e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 509 AQGQLQSSTAQLQVELLQSQTKLSELeaqVRKLELERAQHR----------MLLESLQQRHQADLELIE------DAHRS 572
Cdd:COG3206 74 SSLSASDSPLETQIEILKSRPVLERV---VDKLNLDEDPLGeeasreaaieRLRKNLTVEPVKGSNVIEisytspDPELA 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 573 RIKV-------LETSYQQREEQLRREKEVLSAQHASYCREAEQARAELVA-QHQRQMAMAEQERDQEVARLREL--QQAS 642
Cdd:COG3206 151 AAVAnalaeayLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfRQKNGLVDLSEEAKLLLQQLSELesQLAE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 643 ILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRsLNGIIEQMEKFSSSLNTLSSRVEASHLTtsqqrelgIRQQDEQLR 722
Cdd:COG3206 231 ARAELAEAEARLAALRAQLGSGPDALPELLQSPV-IQQLRAQLAELEAELAELSARYTPNHPD--------VIALRAQIA 301
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 723 ALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMvQQIAMEREELE 800
Cdd:COG3206 302 ALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELY-ESLLQRLEEAR 378
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
731-971 |
1.90e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 731 QQRDMEEERNRLQEVIGKMEvRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQ 810
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIA-ELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 811 KSVMNKCGEERRRLAAewaeyftqqklskeraereaeraMHADSQREGTIISLTKEQAELTVRACE-LRAKEEKLLAERE 889
Cdd:COG4942 97 AELEAQKEELAELLRA-----------------------LYRLGRQPPLALLLSPEDFLDAVRRLQyLKYLAPARREQAE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 890 ALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVH 969
Cdd:COG4942 154 ELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
..
gi 1720365641 970 QE 971
Cdd:COG4942 234 AE 235
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
600-993 |
2.43e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.33 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 600 ASYCREAEQARaelvaQHQRQMAMAEQERDQEVARLRELQQASIlEMRKDHEHQLQRLKMLkdqEIDaVTSATSHtrsln 679
Cdd:COG3096 271 ADYMRHANERR-----ELSERALELRRELFGARRQLAEEQYRLV-EMARELEELSARESDL---EQD-YQAASDH----- 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 680 giieqmekfsssLNTLSSRVEashlttsQQRELGIRQQDeqLRALQERLgRQQRDMEEERNRLQEvigkmevRLSEQSRL 759
Cdd:COG3096 336 ------------LNLVQTALR-------QQEKIERYQED--LEELTERL-EEQEEVVEEAAEQLA-------EAEARLEA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 760 LEQErwrVAAEKTKAESAQRTLEEQ--RKIMVQQiAMEReeLERAKSALLEEQKSVMNkcgeerrrlAAEWAEYFTQQKL 837
Cdd:COG3096 387 AEEE---VDSLKSQLADYQQALDVQqtRAIQYQQ-AVQA--LEKARALCGLPDLTPEN---------AEDYLAAFRAKEQ 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 838 SKERAEREAERAMH----ADSQREGTIISLTK-------EQA-----ELTVRACELRAKEEKL------LAEREALERER 895
Cdd:COG3096 452 QATEEVLELEQKLSvadaARRQFEKAYELVCKiageverSQAwqtarELLRRYRSQQALAQRLqqlraqLAELEQRLRQQ 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 896 QELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQehlsl 975
Cdd:COG3096 532 QNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLA----- 606
|
410
....*....|....*...
gi 1720365641 976 AQQRLQldRVRQEVPASL 993
Cdd:COG3096 607 AQDALE--RLREQSGEAL 622
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
503-824 |
2.85e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.11 E-value: 2.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQ------LQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQA----DLELIEDAHRS 572
Cdd:pfam15921 447 ERQMAAIQGKneslekVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAieatNAEITKLRSRV 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 573 RIKVLETSYQQREEQ----LRREKEVLSAQHA------SYCREAEQARAELVAQHQR-----QMAMAEQERDQEVARLrE 637
Cdd:pfam15921 527 DLKLQELQHLKNEGDhlrnVQTECEALKLQMAekdkviEILRQQIENMTQLVGQHGRtagamQVEKAQLEKEINDRRL-E 605
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 638 LQQASILEMRKDHE-HQLQ-RLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTlsSRVEASHLTTSQQ-RELGI 714
Cdd:pfam15921 606 LQEFKILKDKKDAKiRELEaRVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKT--SRNELNSLSEDYEvLKRNF 683
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 715 RQQDEQLRALQERLGRQ----QRDMEEERNRLQEVIG-----------------------------------------KM 749
Cdd:pfam15921 684 RNKSEEMETTTNKLKMQlksaQSELEQTRNTLKSMEGsdghamkvamgmqkqitakrgqidalqskiqfleeamtnanKE 763
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720365641 750 EVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAkSALLEEQKSVMNKCGEERRRL 824
Cdd:pfam15921 764 KHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKA-SLQFAECQDIIQRQEQESVRL 837
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
608-827 |
3.42e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 608 QARAELVAQHQRQMAMAEQERDQEVARLRELQQAsilemRKDHEHQLQRLkmlkDQEIDAVTsatshtRSLNGIIEQMEK 687
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKE-----EKALLKQLAAL----ERRIAALA------RRIRALEQELAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 688 FSSSLNTLSSRVEAshlttsQQRELGIRQQD--EQLRALQeRLGRQQ---------------------RDMEEERNRLQE 744
Cdd:COG4942 81 LEAELAELEKEIAE------LRAELEAQKEElaELLRALY-RLGRQPplalllspedfldavrrlqylKYLAPARREQAE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 745 VIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLE---EQRKIMVQQIAMEREELERAKSALLEEQKSVMNKCGEER 821
Cdd:COG4942 154 ELRADLAELAALRAELEAERAELEALLAELEEERAALEalkAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
....*.
gi 1720365641 822 RRLAAE 827
Cdd:COG4942 234 AEAAAA 239
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
699-812 |
4.22e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.38 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 699 VEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQ 778
Cdd:PRK12704 44 LEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQ 123
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1720365641 779 RTLEEQRKIMVQQIAMEREELER--------AKSALLEEQKS 812
Cdd:PRK12704 124 QELEKKEEELEELIEEQLQELERisgltaeeAKEILLEKVEE 165
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
504-776 |
4.85e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 4.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQG---QLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRikvLETS 580
Cdd:COG4913 678 ERLDASSDdlaALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL---LEER 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 581 YQQ--REEQLRREKEVLSAQHASYCREAEQARAELV---AQHQRQMAMAEQERDQEVARLRELQ------QASILEmrkD 649
Cdd:COG4913 755 FAAalGDAVERELRENLEERIDALRARLNRAEEELEramRAFNREWPAETADLDADLESLPEYLalldrlEEDGLP---E 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 650 HEHQLQRLkmLKDQEIDAVTS-ATSHTRSLNGIIEQMEKfsssLNTLSSRVEAS-----HLTTSQQRELGIRQQDEQLRA 723
Cdd:COG4913 832 YEERFKEL--LNENSIEFVADlLSKLRRAIREIKERIDP----LNDSLKRIPFGpgrylRLEARPRPDPEVREFRQELRA 905
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 724 LQERLGRQQRDMEEER-NRLQEVIGKM-----EVRLSEQSRLLEQERWRV-AAEKTKAES 776
Cdd:COG4913 906 VTSGASLFDEELSEARfAALKRLIERLrseeeESDRRWRARVLDVRNHLEfDAEEIDRED 965
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
519-775 |
6.00e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 43.69 E-value: 6.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 519 QLQVELLQSQTKLSELEAQVRKLELERAQhrMLLESLQQRHQADLELIE---DAHR---SRIKVLETSYQQREEQLRREK 592
Cdd:pfam06160 234 NVDKEIQQLEEQLEENLALLENLELDEAE--EALEEIEERIDQLYDLLEkevDAKKyveKNLPEIEDYLEHAEEQNKELK 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 593 EVLSAQHASYCREAEQAraELVAQHQRQMAMAEQERDQEVARLRELQQASIlEMRKDHEHQLQRLKMLKDQEIDAVTSAT 672
Cdd:pfam06160 312 EELERVQQSYTLNENEL--ERVRGLEKQLEELEKRYDEIVERLEEKEVAYS-ELQEELEEILEQLEEIEEEQEEFKESLQ 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 673 SHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLT-TSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEV 751
Cdd:pfam06160 389 SLRKDELEAREKLDEFKLELREIKRLVEKSNLPgLPESYLDYFFDVSDEIEDLADELNEVPLNMDEVNRLLDEAQDDVDT 468
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1720365641 752 ------RLSEQSRLLEQ-----ERWR-----VAAEKTKAE 775
Cdd:pfam06160 469 lyekteELIDNATLAEQliqyaNRYRssnpeVAEALTEAE 508
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
503-786 |
7.29e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.81 E-value: 7.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQAD------LELIEDAHRSRIKV 576
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEerekteKLKVEEEKEEKLKA 798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 577 LETSYQ--------QREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEMR- 647
Cdd:pfam02463 799 QEEELRaleeelkeEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEe 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 648 ------KDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQL 721
Cdd:pfam02463 879 leeqklKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEE 958
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720365641 722 RalqERLGRQQRDMEEERNRLQEVIgKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRK 786
Cdd:pfam02463 959 E---ERNKRLLLAKEELGKVNLMAI-EEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRL 1019
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
502-981 |
8.15e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.79 E-value: 8.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 502 YQKQLLAAQGQLQSSTAQLQvELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLeTSY 581
Cdd:COG3096 506 SQQALAQRLQQLRAQLAELE-QRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQR-SEL 583
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 582 QQREEQLRREKEVLSAQhASYCREAEQARAELVAQ------------HQRQMAM-----AEQERDQEVARLRELQQAsIL 644
Cdd:COG3096 584 RQQLEQLRARIKELAAR-APAWLAAQDALERLREQsgealadsqevtAAMQQLLerereATVERDELAARKQALESQ-IE 661
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 645 EMRKDHEHQLQRLKMLKDQ-------------------EIDAVTSATSH---TRSLNGIIEQMEKFSSSLNTL------- 695
Cdd:COG3096 662 RLSQPGGAEDPRLLALAERlggvllseiyddvtledapYFSALYGPARHaivVPDLSAVKEQLAGLEDCPEDLyliegdp 741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 696 SSRVEASHLTTSQQRELGIRQQDEQLR-------ALQERLGRQQR--DMEEERNRLQEVIGKMEVRLSEQSRLLEQERWR 766
Cdd:COG3096 742 DSFDDSVFDAEELEDAVVVKLSDRQWRysrfpevPLFGRAAREKRleELRAERDELAEQYAKASFDVQKLQRLHQAFSQF 821
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 767 VAAEKTKA-----ESAQRTLEEQRKIMVQQIAMEREELERAKSAL--LEEQKSVMNKCGEERRRLAAEwaeyftqqklsk 839
Cdd:COG3096 822 VGGHLAVAfapdpEAELAALRQRRSELERELAQHRAQEQQLRQQLdqLKEQLQLLNKLLPQANLLADE------------ 889
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 840 eraereaeraMHADSQREGTIISLTKEQAELTVRACELRAKE-EKLLA-------EREALERERQELRLEKDRLHKASLR 911
Cdd:COG3096 890 ----------TLADRLEELREELDAAQEAQAFIQQHGKALAQlEPLVAvlqsdpeQFEQLQADYLQAKEQQRRLKQQIFA 959
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 912 LQARAQEVEHMSkvaskkYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQeQRVHQEHLSLAQQRLQ 981
Cdd:COG3096 960 LSEVVQRRPHFS------YEDAVGLLGENSDLNEKLRARLEQAEEARREAREQ-LRQAQAQYSQYNQVLA 1022
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
537-996 |
9.47e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.41 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 537 QVRKLELERAQHRMLLESLQQRHqADLELIEDAHRSRIKVLETSYQQREEQLRREKEVLSAQHA------------SYCR 604
Cdd:PRK04863 287 EALELRRELYTSRRQLAAEQYRL-VEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKieryqadleeleERLE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 605 EAEQARA---ELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRKDHEHQlqrlkmlkdQEIDAVTSAtshtRSLNGI 681
Cdd:PRK04863 366 EQNEVVEeadEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQ---------QAVQALERA----KQLCGL 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 682 IeqmekfSSSLNTLSSRVEAshLTTSQQrelgirQQDEQLRALQERLgrqqrDMEEERNRLQEVIGKMEVRLS-EQSRll 760
Cdd:PRK04863 433 P------DLTADNAEDWLEE--FQAKEQ------EATEELLSLEQKL-----SVAQAAHSQFEQAYQLVRKIAgEVSR-- 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 761 eQERWRVAAEKTKAESAQRTLEEQrkimVQQIAMEREELERAksalLEEQKSVmnkcgeerRRLAAEWaeyftQQKLSKE 840
Cdd:PRK04863 492 -SEAWDVARELLRRLREQRHLAEQ----LQQLRMRLSELEQR----LRQQQRA--------ERLLAEF-----CKRLGKN 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 841 RAEREAERAMHAdsQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKDRLhkaslrlqaraqeve 920
Cdd:PRK04863 550 LDDEDELEQLQE--ELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAL--------------- 612
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 921 hmskvaSKKYEEGEQALQEAQQMQNeqqgrlqvvQRQQEWLRQQEQRVHQEHLSLAQQRL--QLDRVRQEVPASLPGL 996
Cdd:PRK04863 613 ------ARLREQSGEEFEDSQDVTE---------YMQQLLERERELTVERDELAARKQALdeEIERLSQPGGSEDPRL 675
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
510-940 |
1.02e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.50 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 510 QGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAhRSRIKVLETSYQQREEQLR 589
Cdd:TIGR00606 690 EAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPEL-RNKLQKVNRDIQRLKNDIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 590 REKEVLSAQHASYcREAEQARAELVAQHQRQMAMAEQER--DQEVARLRELQ-QASILEMRKDHEHqlqrlkmlKDQEID 666
Cdd:TIGR00606 769 EQETLLGTIMPEE-ESAKVCLTDVTIMERFQMELKDVERkiAQQAAKLQGSDlDRTVQQVNQEKQE--------KQHELD 839
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 667 AVTSATSHTRSL-NGIIEQMEKFSSSLNTLSSrvEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERNRLQEV 745
Cdd:TIGR00606 840 TVVSKIELNRKLiQDQQEQIQHLKSKTNELKS--EKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETF 917
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 746 IGKmevrlseqsrLLEQERWRVAAEKTKAESAQRTLEEQRKiMVQQIAMEREELERAKSALLEEQKSvmnkcgEERRRLA 825
Cdd:TIGR00606 918 LEK----------DQQEKEELISSKETSNKKAQDKVNDIKE-KVKNIHGYMKDIENKIQDGKDDYLK------QKETELN 980
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 826 AEWAEYFTQQKLSKERAEREAERAMHADSQREGTiiSLTKEQAELTVRACELRAKEEKL------------LAEREALER 893
Cdd:TIGR00606 981 TVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQE--RWLQDNLTLRKRENELKEVEEELkqhlkemgqmqvLQMKQEHQK 1058
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1720365641 894 ERQELRLEKDRLHKASLRLQARAQEVEHM-SKVASKKYEEGEQALQEA 940
Cdd:TIGR00606 1059 LEENIDLIKRNHVLALGRQKGYEKEIKHFkKELREPQFRDAEEKYREM 1106
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
582-921 |
1.10e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.40 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 582 QQREEQLRREKEVLSAQHASY------CREAEQARAELVAQHqrqMAMAEQERDQEVARLRELQQASILEMRKDHEHQLQ 655
Cdd:COG3096 784 EKRLEELRAERDELAEQYAKAsfdvqkLQRLHQAFSQFVGGH---LAVAFAPDPEAELAALRQRRSELERELAQHRAQEQ 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 656 RLKmlkdqeiDAVTSATSHTRSLNGIIEQMEKFSSslNTLSSRVEA--SHLTTSQQRELGIRQQDEQLRALQERLGRQQR 733
Cdd:COG3096 861 QLR-------QQLDQLKEQLQLLNKLLPQANLLAD--ETLADRLEElrEELDAAQEAQAFIQQHGKALAQLEPLVAVLQS 931
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 734 DMEEERNRLQEVigkmeVRLSEQSRLLEQERW---RVAAEKT--KAESAQRTLEEQRKiMVQQIameREELERAksallE 808
Cdd:COG3096 932 DPEQFEQLQADY-----LQAKEQQRRLKQQIFalsEVVQRRPhfSYEDAVGLLGENSD-LNEKL---RARLEQA-----E 997
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 809 EQKSvmnKCGEERRRLAAEWAEYftQQKLSKERAEREAERAMHADSQRegtiisltkEQAELTVRA---CELRAKEEK-- 883
Cdd:COG3096 998 EARR---EAREQLRQAQAQYSQY--NQVLASLKSSRDAKQQTLQELEQ---------ELEELGVQAdaeAEERARIRRde 1063
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1720365641 884 -------LLAEREALERERQELRLEKDRLHKASLRL-----QARAQEVEH 921
Cdd:COG3096 1064 lheelsqNRSRRSQLEKQLTRCEAEMDSLQKRLRKAerdykQEREQVVQA 1113
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
738-987 |
1.21e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 738 ERNRLQEVIGKmEVRLSEQSRLLEQERwrvAAEKTKAESAQRTLEEQRKIMVQQIAMEREELERAKSALLEEQKSVMNKC 817
Cdd:PTZ00121 1085 EDNRADEATEE-AFGKAEEAKKTETGK---AEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 818 GEERRRLAAEWAEyftqqklskeraereaeRAMHADSQRegtiisltkeQAELTVRACELRAKEEKLLAerEALERERQE 897
Cdd:PTZ00121 1161 EDARKAEEARKAE-----------------DAKKAEAAR----------KAEEVRKAEELRKAEDARKA--EAARKAEEE 1211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 898 LRLEKDRLHKASLRLQA--RAQEVEhmskvasKKYEEGEQALQE--AQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEhL 973
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAvkKAEEAK-------KDAEEAKKAEEErnNEEIRKFEEARMAHFARRQAAIKAEEARKADE-L 1283
|
250
....*....|....
gi 1720365641 974 SLAQQRLQLDRVRQ 987
Cdd:PTZ00121 1284 KKAEEKKKADEAKK 1297
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
502-839 |
1.47e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 42.76 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 502 YQKQLLAAQGQLQ------SSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRM----LLESLQQRHQADLELIEDAHR 571
Cdd:COG5022 873 SAQRVELAERQLQelkidvKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTeliaRLKKLLNNIDLEEGPSIEYVK 952
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 572 SRIKVletSYQQREEQLRREKEVLSA---QHASYCREAEQARAELVaQHQRQMAMAEQERDQ---EVARLRELQQASI-- 643
Cdd:COG5022 953 LPELN---KLHEVESKLKETSEEYEDllkKSTILVREGNKANSELK-NFKKELAELSKQYGAlqeSTKQLKELPVEVAel 1028
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 644 --LEMRKDHEH----------QLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRE 711
Cdd:COG5022 1029 qsASKIISSEStelsilkplqKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNL 1108
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 712 LGIRQQDEQLRALQERLGRQQRdMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEktkaesaQRTLEEQRKIMVQQ 791
Cdd:COG5022 1109 VKPANVLQFIVAQMIKLNLLQE-ISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLE-------ALPSPPPFAALSEK 1180
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1720365641 792 IAMEREELERAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSK 839
Cdd:COG5022 1181 RLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLIS 1228
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
513-981 |
1.82e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 513 LQSSTAQLQVELLQS-QTKLSELEaqvRKLELERAQHRMLLESLQQRHQ-----ADLELIEDAHRSRIKVLET---SYQQ 583
Cdd:PRK04863 503 RRLREQRHLAEQLQQlRMRLSELE---QRLRQQQRAERLLAEFCKRLGKnlddeDELEQLQEELEARLESLSEsvsEARE 579
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 584 REEQLRREKEVLSAQHASYCREAEQARA-----------------------ELVAQHQRQMAMAEQERDQEVARLRELQQ 640
Cdd:PRK04863 580 RRMALRQQLEQLQARIQRLAARAPAWLAaqdalarlreqsgeefedsqdvtEYMQQLLERERELTVERDELAARKQALDE 659
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 641 aSILEMRKDHEHQLQRLKMLKDQ-------------------EIDAVTSATSH---TRSLNGIIEQMEKFSSSLNTL--- 695
Cdd:PRK04863 660 -EIERLSQPGGSEDPRLNALAERfggvllseiyddvsledapYFSALYGPARHaivVPDLSDAAEQLAGLEDCPEDLyli 738
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 696 --------SSRVEASHLttsqQRELGIRQQDEQLRALQ----ERLGRQQRD-----MEEERNRLQEVIGKMEVRLSEQSR 758
Cdd:PRK04863 739 egdpdsfdDSVFSVEEL----EKAVVVKIADRQWRYSRfpevPLFGRAAREkrieqLRAEREELAERYATLSFDVQKLQR 814
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 759 LLEQERWRVAAEKTKA-----ESAQRTLEEQRKIMVQQIAMEREELERAKSAL--LEEQKSVMNKCGEERRRLAAEwaey 831
Cdd:PRK04863 815 LHQAFSRFIGSHLAVAfeadpEAELRQLNRRRVELERALADHESQEQQQRSQLeqAKEGLSALNRLLPRLNLLADE---- 890
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 832 FTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELtvraceLRAKEEKLLAEREALERERQELRLekdrlhkasLR 911
Cdd:PRK04863 891 TLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEPIVSV------LQSDPEQFEQLKQDYQQAQQTQRD---------AK 955
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 912 LQARAQeVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQeQRVHQEHLSLAQQRLQ 981
Cdd:PRK04863 956 QQAFAL-TEVVQRRAHFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQ-LRQAQAQLAQYNQVLA 1023
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
503-909 |
1.90e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQvELLQSQTKLsELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLET--- 579
Cdd:COG3096 298 RRQLAEEQYRLVEMARELE-ELSARESDL-EQDYQAASDHLNLVQTALRQQEKIERYQEDLEELTERLEEQEEVVEEaae 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 580 SYQQREEQLRR-EKEV--LSAQHASYCR--EAEQARAElvaqhQRQMAMAEQERDQEVARLRELQQASIlemrKDHEHQL 654
Cdd:COG3096 376 QLAEAEARLEAaEEEVdsLKSQLADYQQalDVQQTRAI-----QYQQAVQALEKARALCGLPDLTPENA----EDYLAAF 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 655 QRlkmlKDQEIDAVTSATSHTRSL-NGIIEQMEKFSSSLNTLSSRVEAShlTTSQQrelgIRQQDEQLRALQERLGRQQr 733
Cdd:COG3096 447 RA----KEQQATEEVLELEQKLSVaDAARRQFEKAYELVCKIAGEVERS--QAWQT----ARELLRRYRSQQALAQRLQ- 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 734 dmeeernrlqevigKMEVRLSEQSRLLEQERwrvaaektkaeSAQRTLEEQRKIMVQQI--AMEREELERAKSALLEEQK 811
Cdd:COG3096 516 --------------QLRAQLAELEQRLRQQQ-----------NAERLLEEFCQRIGQQLdaAEELEELLAELEAQLEELE 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 812 SVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTVRACELRaKEEKLLAEREAL 891
Cdd:COG3096 571 EQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLLE-REREATVERDEL 649
|
410
....*....|....*...
gi 1720365641 892 ERERQELRLEKDRLHKAS 909
Cdd:COG3096 650 AARKQALESQIERLSQPG 667
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
724-989 |
2.10e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 724 LQERLGRQQRDMEEERNRLQEvigKMEVRLSEQSRLLEqerwrVAAEKTKAESAQRTLEE-QRKIMVQQIAMEREELERA 802
Cdd:COG3206 105 LDEDPLGEEASREAAIERLRK---NLTVEPVKGSNVIE-----ISYTSPDPELAAAVANAlAEAYLEQNLELRREEARKA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 803 kSALLEEQksvMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREgtIISLTKEQAELTVRACELRAKEE 882
Cdd:COG3206 177 -LEFLEEQ---LPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQ--LAEARAELAEAEARLAALRAQLG 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 883 ----------------KLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEhmskvaskkyeegEQALQEAQQMQNE 946
Cdd:COG3206 251 sgpdalpellqspviqQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALR-------------AQLQQEAQRILAS 317
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1720365641 947 QQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLQLDRVRQEV 989
Cdd:COG3206 318 LEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREV 360
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
228-430 |
2.26e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 228 KPTVASSEGRQSRRQS----VSRFLGEGGPDPKGESlgfKQSSPPASSPIHPRKGGADWLGLKD--NDLDLLSPSPVQKA 301
Cdd:PHA03247 2672 RAAQASSPPQRPRRRAarptVGSLTSLADPPPPPPT---PEPAPHALVSATPLPPGPAAARQASpaLPAAPAPPAVPAGP 2748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 302 QQEDSPMTPSLLPPTNQPSAPEPQSAPTGLPSAAKPPAKGArpSLKASQASSPKASEEKedDWLSHVISQKKSQNLAREE 381
Cdd:PHA03247 2749 ATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA--SLSESRESLPSPWDPA--DPPAAVLAPAAALPPAASP 2824
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1720365641 382 RAGPPKDLASLGSLGQTPSGSLPVAQVLEQ--APAGEASKPTTQGMAAVRP 430
Cdd:PHA03247 2825 AGPLPPPTSAQPTAPPPPPGPPPPSLPLGGsvAPGGDVRRRPPSRSPAAKP 2875
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
494-806 |
2.28e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 42.37 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 494 QSLLPGSGYQKQLLAAQGQLQSSTAQLQVELLQSQTKLSE--LEAQVRKLELERA-----QHRML------LESLQQRHQ 560
Cdd:COG5022 800 QPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEfsLKAEVLIQKFGRSlkakkRFSLLkketiyLQSAQRVEL 879
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 561 ADLELIE--DAHRSRIKVLETSYQQREEQLRREKEVLSAqhasycreaEQARAELVAQHQRQMAMAEQERDQEVARLREL 638
Cdd:COG5022 880 AERQLQElkIDVKSISSLKLVNLELESEIIELKKSLSSD---------LIENLEFKTELIARLKKLLNNIDLEEGPSIEY 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 639 QQASILEmrKDHEhQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELgirqqD 718
Cdd:COG5022 951 VKLPELN--KLHE-VESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKEL-----P 1022
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 719 EQLRALQ--ERLGRQQRDMEEERNRLQEVIGKMEV---RLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIA 793
Cdd:COG5022 1023 VEVAELQsaSKIISSESTELSILKPLQKLKGLLLLennQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLE 1102
|
330
....*....|...
gi 1720365641 794 MEREELERAKSAL 806
Cdd:COG5022 1103 VTNRNLVKPANVL 1115
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
502-761 |
2.33e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 502 YQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRML--LESLQQRHQADLELIE---DAHRSRIKV 576
Cdd:TIGR00618 633 HLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALqkMQSEKEQLTYWKEMLAqcqTLLRELETH 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 577 LETSYQQREEQlrrekevlsaQHASYCREAEQARAELVAQHQRQMAMAEQE---RDQEVARLRELQQASILEMRKDHEHQ 653
Cdd:TIGR00618 713 IEEYDREFNEI----------ENASSSLGSDLAAREDALNQSLKELMHQARtvlKARTEAHFNNNEEVTAALQTGAELSH 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 654 LQRLKMLKDQEIDAVTSATSHTRSlngiiEQMEKFSSSLNTLSSRVEashltTSQQRELGIRQQDEQLRALQERLGRQQR 733
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLKTLEA-----EIGQEIPSDEDILNLQCE-----TLVQEEEQFLSRLEEKSATLGEITHQLL 852
|
250 260
....*....|....*....|....*...
gi 1720365641 734 DMEEERNRLQEVIgKMEVRLSEQSRLLE 761
Cdd:TIGR00618 853 KYEECSKQLAQLT-QEQAKIIQLSDKLN 879
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
503-946 |
2.59e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.93 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQL---QVELLQSQTKLSELEAQVRKLELEraqhrmlLESLQQRHQADLeliedahrsrIKVLET 579
Cdd:TIGR04523 252 QTQLNQLKDEQNKIKKQLsekQKELEQNNKKIKELEKQLNQLKSE-------ISDLNNQKEQDW----------NKELKS 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 580 SYQQREEQLRREKEVLSaqhasycrEAEQARAELvaqhQRQMAMAEQERDQevarlRELQQASILEMRKDHEHQLQRLKM 659
Cdd:TIGR04523 315 ELKNQEKKLEEIQNQIS--------QNNKIISQL----NEQISQLKKELTN-----SESENSEKQRELEEKQNEIEKLKK 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 660 LKDQEIDAVTSATSHTRSLNGIIEQMEKfssslntlssrveashltTSQQRELGIRQQDEQLRALQErlgrQQRDMEEER 739
Cdd:TIGR04523 378 ENQSYKQEIKNLESQINDLESKIQNQEK------------------LNQQKDEQIKKLQQEKELLEK----EIERLKETI 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 740 NRLQEVIgkmevrlseqSRLLEQErwrvAAEKTKAESAQRTLEEQRkimvQQIAMEREELERAKSALLEEQKSVMNKCGE 819
Cdd:TIGR04523 436 IKNNSEI----------KDLTNQD----SVKELIIKNLDNTRESLE----TQLKVLSRSINKIKQNLEQKQKELKSKEKE 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 820 errrlaaewAEYFTQQKlskeraereaeramhadSQREGTIISLTKEQAELTVracelraKEEKLLAEREALERERQEL- 898
Cdd:TIGR04523 498 ---------LKKLNEEK-----------------KELEEKVKDLTKKISSLKE-------KIEKLESEKKEKESKISDLe 544
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720365641 899 --------RLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNE 946
Cdd:TIGR04523 545 delnkddfELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKD 600
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
626-792 |
3.10e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 3.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 626 QERDQEVARLRELqqasilemRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHLT 705
Cdd:COG1579 13 QELDSELDRLEHR--------LKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 706 TSQQREL-GIRQQDEQLRALQERLGRQQRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQ 784
Cdd:COG1579 85 VRNNKEYeALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
....*...
gi 1720365641 785 RKIMVQQI 792
Cdd:COG1579 165 REELAAKI 172
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
518-637 |
3.12e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.61 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 518 AQLQVELLQSQTKLSELEAQVRKLELERAQhrmLLESLQQRHQADLELIEDahrsRIKVLETSYQQREEQLRREKEVLSA 597
Cdd:COG0542 400 ARVRMEIDSKPEELDELERRLEQLEIEKEA---LKKEQDEASFERLAELRD----ELAELEEELEALKARWEAEKELIEE 472
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1720365641 598 QHAsyCREAEQARAELVAQHQRQMAMAEQERDQEVARLRE 637
Cdd:COG0542 473 IQE--LKEELEQRYGKIPELEKELAELEEELAELAPLLRE 510
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
702-937 |
3.15e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 41.22 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 702 SHLTTSQQ----RELGIRQQDEQLRALQERLGRQQ-------RDMEEERNRLQEV----------IGKMEVRLSEQSRLL 760
Cdd:PRK11637 47 DQLKSIQQdiaaKEKSVRQQQQQRASLLAQLKKQEeaisqasRKLRETQNTLNQLnkqidelnasIAKLEQQQAAQERLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 761 EQERwrVAAEKT----------KAESAQRT---------LEEQRKIMVQQIAMEREELERAKSALLEEQksvmnkcGEER 821
Cdd:PRK11637 127 AAQL--DAAFRQgehtglqlilSGEESQRGerilayfgyLNQARQETIAELKQTREELAAQKAELEEKQ-------SQQK 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 822 RRLAAEWAEyftQQKLSKeraereaeramhADSQREGTII----SLTKEQAELTvracELRAKEEKLL-----AEREALE 892
Cdd:PRK11637 198 TLLYEQQAQ---QQKLEQ------------ARNERKKTLTglesSLQKDQQQLS----ELRANESRLRdsiarAEREAKA 258
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1720365641 893 RERQELRlEKDRLhkaslrlqaRAQEVEHMSKVASKKYEEGEQAL 937
Cdd:PRK11637 259 RAEREAR-EAARV---------RDKQKQAKRKGSTYKPTESERSL 293
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
503-928 |
3.39e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.70 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVEL----LQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRikvle 578
Cdd:pfam01576 210 KRKLEGESTDLQEQIAELQAQIaelrAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESER----- 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 579 tSYQQREEQLRREKEvlsaqhasycREAEQARAELVAQHQRQMAMAE--QERDQEVARLRElqqaSILEMRKDHEHQLQR 656
Cdd:pfam01576 285 -AARNKAEKQRRDLG----------EELEALKTELEDTLDTTAAQQElrSKREQEVTELKK----ALEEETRSHEAQLQE 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 657 LKMLKDQEIDAVTSATSHTRSLNGiieQMEKFSSSLNTLSSRVEASHLTTSQQR---ELGIRQQDEQLRALQERLGrqqr 733
Cdd:pfam01576 350 MRQKHTQALEELTEQLEQAKRNKA---NLEKAKQALESENAELQAELRTLQQAKqdsEHKRKKLEGQLQELQARLS---- 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 734 DMEEERNRLQEVIGKMEVRLSEQSRLLE--------------------QERWRVAAEKTKAE----SAQRTLEEQRKIMV 789
Cdd:pfam01576 423 ESERQRAELAEKLSKLQSELESVSSLLNeaegkniklskdvsslesqlQDTQELLQEETRQKlnlsTRLRQLEDERNSLQ 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 790 QQIAME---REELERAKSAL----------LEEQKSVMNKCGEERRRLAAEwAEYFTQQ---------KLSKERAEREAE 847
Cdd:pfam01576 503 EQLEEEeeaKRNVERQLSTLqaqlsdmkkkLEEDAGTLEALEEGKKRLQRE-LEALTQQleekaaaydKLEKTKNRLQQE 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 848 ---RAMHADSQREgTIISLTKEQAELTV-----RACELRAKEEKLLAEREALERERQELRL----EKDRLHKASLRLQAR 915
Cdd:pfam01576 582 lddLLVDLDHQRQ-LVSNLEKKQKKFDQmlaeeKAISARYAEERDRAEAEAREKETRALSLaralEEALEAKEELERTNK 660
|
490
....*....|...
gi 1720365641 916 AQEVEHMSKVASK 928
Cdd:pfam01576 661 QLRAEMEDLVSSK 673
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
503-785 |
3.76e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 40.82 E-value: 3.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQ---LQVELLQSQTKLSELEAQVRKLelerAQHRMLLESLQQRHQA-----------------D 562
Cdd:pfam19220 124 ERQLAAETEQNRALEEEnkaLREEAQAAEKALQRAEGELATA----RERLALLEQENRRLQAlseeqaaelaeltrrlaE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 563 LELIEDAHRSRIKVLETSYQqrEEQLRREKevLSAQHASycrEAEQARAELVAQHQR------QMAMAEQERDQEVARLR 636
Cdd:pfam19220 200 LETQLDATRARLRALEGQLA--AEQAERER--AEAQLEE---AVEAHRAERASLRMKlealtaRAAATEQLLAEARNQLR 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 637 ELQQASILEMRKDHEHQLQRLKmlKDQEIDAVTSATSHTRSLNGIIEQMEkfssslNTLSSRVEAshLTTS-QQRELGIR 715
Cdd:pfam19220 273 DRDEAIRAAERRLKEASIERDT--LERRLAGLEADLERRTQQFQEMQRAR------AELEERAEM--LTKAlAAKDAALE 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 716 QQDEQLRALQERLGRQQRDMEEERNRLQEVIGkmevRLSEQsrlLEQERwrvaAEKTKAESAQRTLEEQR 785
Cdd:pfam19220 343 RAEERIASLSDRIAELTKRFEVERAALEQANR----RLKEE---LQRER----AERALAQGALEIARESR 401
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
583-940 |
4.12e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 583 QREEQLRREKEVLSAQHASYCREAE------QARAELVAQHqrqMAMAEQErDQEVArLRELQQASILEMRK--DHEHQL 654
Cdd:PRK04863 786 KRIEQLRAEREELAERYATLSFDVQklqrlhQAFSRFIGSH---LAVAFEA-DPEAE-LRQLNRRRVELERAlaDHESQE 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 655 QRLKmlkdqeiDAVTSATSHTRSLNGIIEQMEKFSSslNTLSSRVEASH--LTTSQQRELGIRQQDEQLRAL-------- 724
Cdd:PRK04863 861 QQQR-------SQLEQAKEGLSALNRLLPRLNLLAD--ETLADRVEEIReqLDEAEEAKRFVQQHGNALAQLepivsvlq 931
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 725 --QERLGRQQRDMEEERNRLQevigkmevRLSEQSRLLEQERWRVAAekTKAESAQRTLEEQRKiMVQQIameREELERA 802
Cdd:PRK04863 932 sdPEQFEQLKQDYQQAQQTQR--------DAKQQAFALTEVVQRRAH--FSYEDAAEMLAKNSD-LNEKL---RQRLEQA 997
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 803 KSALLEeqksvmnkCGEERRRLAAEWAEYftQQKLSKERAEREAERAMHADSQRegtiisltkEQAELTVRACElrAKEE 882
Cdd:PRK04863 998 EQERTR--------AREQLRQAQAQLAQY--NQVLASLKSSYDAKRQMLQELKQ---------ELQDLGVPADS--GAEE 1056
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720365641 883 KLLAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEA 940
Cdd:PRK04863 1057 RARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNA 1114
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
504-635 |
4.25e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 4.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 504 KQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQA-----DLELIE---DAHRSRIK 575
Cdd:COG1579 27 KELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNvrnnkEYEALQkeiESLKRRIS 106
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720365641 576 VLETSYQQ---REEQLRREKEVLSAQHASYCREAEQARAEL---VAQHQRQMAMAEQERDQEVARL 635
Cdd:COG1579 107 DLEDEILElmeRIEELEEELAELEAELAELEAELEEKKAELdeeLAELEAELEELEAEREELAAKI 172
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
567-806 |
4.29e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 567 EDAHRSRIKVLETSYQ-QREEQLRREKEV--LSAQHASYCREAEQARAELVAQHQRQMAMAEQERDQEVA--RLRELQQA 641
Cdd:pfam12128 599 EEELRERLDKAEEALQsAREKQAAAEEQLvqANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKknKALAERKD 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 642 SILEMRKDHEHQLQRLK-----MLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASH------LTTSQQR 710
Cdd:pfam12128 679 SANERLNSLEAQLKQLDkkhqaWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAkaelkaLETWYKR 758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 711 ELGIRQQDEQLRAlqerlgrqqrDMEEERNRLQEVIGKMEVRLSE--QSRLLEQERW-----RVAAEKTKAESAQRTLEE 783
Cdd:pfam12128 759 DLASLGVDPDVIA----------KLKREIRTLERKIERIAVRRQEvlRYFDWYQETWlqrrpRLATQLSNIERAISELQQ 828
|
250 260
....*....|....*....|...
gi 1720365641 784 QRKIMVQQIAMEREELERAKSAL 806
Cdd:pfam12128 829 QLARLIADTKLRRAKLEMERKAS 851
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
503-994 |
4.32e-03 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 41.28 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 503 QKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKVLETSYQ 582
Cdd:pfam07111 244 RQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELTRKIQPSDSLEPEFPKKCRSLLNRWREKVFALMVQLK 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 583 QREEQLRREKEVLSAQHASYCREA-EQARAELVAQHQRQMAMAEQERDQEVARLRELQQASILEMRKdheHQLQRLKMLK 661
Cdd:pfam07111 324 AQDLEHRDSVKQLRGQVAELQEQVtSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARR---RQQQQTASAE 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 662 DQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRV-----EASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDME 736
Cdd:pfam07111 401 EQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLsyavrKVHTIKGLMARKVALAQLRQESCPPPPPAPPVDADLS 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 737 EERNRLQEVIGKMEVRLSEQSRLLEQErwrVAAEKTKAESAQRTLEEqrkiMVQQIameREELERAKSAL--LEEQKSVM 814
Cdd:pfam07111 481 LELEQLREERNRLDAELQLSAHLIQQE---VGRAREQGEAERQQLSE----VAQQL---EQELQRAQESLasVGQQLEVA 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 815 NKCGEERRRLAAEWAEYFTQQKlskeraereaeramhadsqrEGTIISLTKEQAELTVRACELRAKEEKLLAEREaleRE 894
Cdd:pfam07111 551 RQGQQESTEEAASLRQELTQQQ--------------------EIYGQALQEKVAEVETRLREQLSDTKRRLNEAR---RE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 895 RQELRLEKDRLHKASLRLQARAQEVEHMSKVASKkyEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLS 974
Cdd:pfam07111 608 QAKAVVSLRQIQHRATQEKERNQELRRLQDEARK--EEGQRLARRVQELERDKNLMLATLQQEGLLSRYKQQRLLAVLPS 685
|
490 500
....*....|....*....|
gi 1720365641 975 LAQQRLQLDRVRQEVPASLP 994
Cdd:pfam07111 686 GLDKKSVVSSPRPECSASAP 705
|
|
| PLN03086 |
PLN03086 |
PRLI-interacting factor K; Provisional |
876-964 |
4.34e-03 |
|
PRLI-interacting factor K; Provisional
Pssm-ID: 178635 [Multi-domain] Cd Length: 567 Bit Score: 41.01 E-value: 4.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 876 ELRAKEEKLlaEREALER-ERQELRLEKDRLHKASLRLQARAQEVEHMskvaSKKYEEGEQALQEAQQMQ-NEQQGRLQV 953
Cdd:PLN03086 4 ELRRAREKL--EREQRERkQRAKLKLERERKAKEEAAKQREAIEAAQR----SRRLDAIEAQIKADQQMQeSLQAGRGIV 77
|
90
....*....|.
gi 1720365641 954 VQRQQEWLRQQ 964
Cdd:PLN03086 78 FSRIFEAVSFQ 88
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
708-892 |
4.91e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 708 QQRELGIRQQDEQLRALQERLgrqqRDMEEERNRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKI 787
Cdd:COG1579 13 QELDSELDRLEHRLKELPAEL----AELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 788 -MVQQIAMEREELERAKSALLEEQKSVMNKCGEERRRLAAewaeyfTQQKLSKERAEreaeramhadsqregtiisLTKE 866
Cdd:COG1579 89 kEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAE------LEAELAELEAE-------------------LEEK 143
|
170 180
....*....|....*....|....*.
gi 1720365641 867 QAELTVRACELRAKEEKLLAEREALE 892
Cdd:COG1579 144 KAELDEELAELEAELEELEAEREELA 169
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
859-988 |
5.15e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 5.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 859 TIISLTKEQAELTVRACELRA---KEEKLLAEREALERER----QELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYE 931
Cdd:PRK12704 31 AKIKEAEEEAKRILEEAKKEAeaiKKEALLEAKEEIHKLRnefeKELRERRNELQKLEKRLLQKEENLDRKLELLEKREE 110
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720365641 932 EGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRLqLDRVRQE 988
Cdd:PRK12704 111 ELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAKEIL-LEKVEEE 166
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
522-793 |
5.45e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.10 E-value: 5.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 522 VELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQAdleliEDAHRSRIKVL-ETSYQQREEQLRREKEvlsaqha 600
Cdd:PRK04863 837 AELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSA-----LNRLLPRLNLLaDETLADRVEEIREQLD------- 904
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 601 sycrEAEQARAeLVAQHQRQMAMAEqerdQEVARLRELQQAsILEMRKDHEHQLQRLKMLKDQ-----EIDAVTSATSHT 675
Cdd:PRK04863 905 ----EAEEAKR-FVQQHGNALAQLE----PIVSVLQSDPEQ-FEQLKQDYQQAQQTQRDAKQQafaltEVVQRRAHFSYE 974
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 676 RSLNGIIEqmekfSSSLN-TLSSRVEASHLTTSQQRElGIRQQDEQL--------------RALQERLGRQQRDME---- 736
Cdd:PRK04863 975 DAAEMLAK-----NSDLNeKLRQRLEQAEQERTRARE-QLRQAQAQLaqynqvlaslkssyDAKRQMLQELKQELQdlgv 1048
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 737 ------EERNRLQEviGKMEVRLSE-QSRL--LEQERWRVAAE----KTKAESAQRTLEEQRKIMVQQIA 793
Cdd:PRK04863 1049 padsgaEERARARR--DELHARLSAnRSRRnqLEKQLTFCEAEmdnlTKKLRKLERDYHEMREQVVNAKA 1116
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
523-959 |
6.56e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.54 E-value: 6.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 523 ELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQADLELIEDAHRSRIKvLETSYQQREEQLRrEKEVLSAQHASY 602
Cdd:pfam01576 13 ELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRAR-LAARKQELEEILH-ELESRLEEEEER 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 603 CREAEQARAELvaqhQRQMAMAEQERDQEVARLRELQQASILEMRKDHEHQlQRLKMLKDQEIDAVTSATSHTRSLNGII 682
Cdd:pfam01576 91 SQQLQNEKKKM----QQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLE-EDILLLEDQNSKLSKERKLLEERISEFT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 683 EQM---EKFSSSLNTLSSRVEA--SHLTTSQQRELGIRQQDEQLRalqERLGRQQRDMEEERNRLQEVIGKMEVRLSEQS 757
Cdd:pfam01576 166 SNLaeeEEKAKSLSKLKNKHEAmiSDLEERLKKEEKGRQELEKAK---RKLEGESTDLQEQIAELQAQIAELRAQLAKKE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 758 RLLEQERWRVAAEKTKAESAQRTLEE-QRKIMVQQIAMEREELERAKSallEEQKSVMnkcGEERRRLAAEWAEYF---- 832
Cdd:pfam01576 243 EELQAALARLEEETAQKNNALKKIRElEAQISELQEDLESERAARNKA---EKQRRDL---GEELEALKTELEDTLdtta 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 833 TQQKLSKERAEREAERAMHADSQREGTIISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKDRLHKASLRL 912
Cdd:pfam01576 317 AQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTL 396
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1720365641 913 QARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQE 959
Cdd:pfam01576 397 QQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELE 443
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
20-359 |
6.62e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.54 E-value: 6.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 20 PSGKGAAKGPGKEGPSNHKPAGTLTAneKGYTMPTKKPPPSSSKTGLQYKKFSFEDFEDPLAGllsdeEEETATKLPAVe 99
Cdd:PHA03307 66 EPPTGPPPGPGTEAPANESRSTPTWS--LSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASP-----PPSPAPDLSEM- 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 100 RKPAPKSPGAAAGQGPSVPLTPGDTPI-----RKKELLFDEGDDIMTTLGfedSPKAERKKTGDQEGPLPARSKLDELLG 174
Cdd:PHA03307 138 LRPVGSPGPPPAASPPAAGASPAAVASdaassRQAALPLSSPEETARAPS---SPPAEPPPSTPPAAASPRPPRRSSPIS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 175 rgtAAKLLTRPGTGERREFQLDKKYqkmggEESVPARDKEDSWDDETLTFGAYKPTVASSegrqSRRQSVSRFLGEGGPD 254
Cdd:PHA03307 215 ---ASASSPAPAPGRSAADDAGASS-----SDSSSSESSGCGWGPENECPLPRPAPITLP----TRIWEASGWNGPSSRP 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 255 PKGESLGFKQSSPPASSPIHPRKGGADwlGLKDNDLDLLSPSPVQKAQQEDSPMTPS-LLPPTNQPSAPEPQSAPTGLPS 333
Cdd:PHA03307 283 GPASSSSSPRERSPSPSPSSPGSGPAP--SSPRASSSSSSSRESSSSSTSSSSESSRgAAVSPGPSPSRSPSPSRPPPPA 360
|
330 340
....*....|....*....|....*.
gi 1720365641 334 AAKPPAKGARPSLKASQASSPKASEE 359
Cdd:PHA03307 361 DPSSPRKRPRPSRAPSSPAASAGRPT 386
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
750-988 |
8.61e-03 |
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Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 8.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 750 EVRLSEQSRLLEQERWRvaaekTKAESAQRTLEEQRKImvqqiamerEELERAKSALLEEQKSVMnkcgEERRRLAAEwa 829
Cdd:pfam17380 286 ERQQQEKFEKMEQERLR-----QEKEEKAREVERRRKL---------EEAEKARQAEMDRQAAIY----AEQERMAME-- 345
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90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 830 eyftqqklskerAEREAERAMHADSQREGTIIsltkEQAELTVRACELRAKEEKLLAEREALERERQELRLEKdrlhKAS 909
Cdd:pfam17380 346 ------------RERELERIRQEERKRELERI----RQEEIAMEISRMRELERLQMERQQKNERVRQELEAAR----KVK 405
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170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720365641 910 LRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQE-QRVHQEHLSLAQQRLQLDRVRQE 988
Cdd:pfam17380 406 ILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQvERLRQQEEERKRKKLELEKEKRD 485
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