|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
96-622 |
3.17e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 3.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 96 EELARKHHMAIEAVHSNASRDKIKLQTELEEQyKKEKLSLEEDKNQLQLELESLKQ---ALGDKLTSANQEIGRLQDLVR 172
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEEL-EAELEELEAELAELEAELEELRLeleELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 173 KSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEK--LRVDRMAHDLE 250
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEalLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 251 IKWTENLRQECSKLRQELRL--------QHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLELQLCQ 322
Cdd:COG1196 379 EELEELAEELLEALRAAAELaaqleeleEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 323 SQTSLQQLQAQF-TQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLK---- 397
Cdd:COG1196 459 EALLELLAELLEeAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAayea 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 398 ---DAHRESMEGFRVEMEQELQTLRFELEDEGKAMLASLRSELNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQS 474
Cdd:COG1196 539 aleAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVL 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 475 KEHMCRISDLQEELRHREHHITDLD---KEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEKELDV 551
Cdd:COG1196 619 GDTLLGRTLVAARLEAALRRAVTLAgrlREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEA 698
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720362587 552 MTADHLREKNIMRADFNKTNELLKEINAALQVSLEDMEEKYLMRESRPEDIQMIAELKSLITERDQVIKKL 622
Cdd:COG1196 699 LLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELEREL 769
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
50-523 |
1.02e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.26 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 50 KIAQLTKKVNEAkrtQQEYYE--MELKNLQNRLEGEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEEQ 127
Cdd:COG1196 275 ELEELELELEEA---QAEEYEllAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 128 YKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLK 207
Cdd:COG1196 352 ELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 208 ETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRM--AHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMSQLLQ 285
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLeeAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVK 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 286 LKEREKNAARDS--------WQKKVEDLLN--------------------QISLLKQNLELQLCQSQTSLQQLQAQFTQE 337
Cdd:COG1196 512 AALLLAGLRGLAgavavligVEAAYEAALEaalaaalqnivveddevaaaAIEYLKAAKAGRATFLPLDKIRARAALAAA 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 338 RQRLTQELEELEEQHQQRHKSLKEAHV---LAFQTMEEE-KEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQ 413
Cdd:COG1196 592 LARGAIGAAVDLVASDLREADARYYVLgdtLLGRTLVAArLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELL 671
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 414 ELQTLRFELEDEGKAMLASLRSELNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREH 493
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
490 500 510
....*....|....*....|....*....|
gi 1720362587 494 HITDLDKEvqhlhENINTLTKELELKGKEI 523
Cdd:COG1196 752 ALEELPEP-----PDLEELERELERLEREI 776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
127-515 |
3.19e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 3.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 127 QYKKEKLSLEEDKNQLQLELESLKQALGD---KLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTK 203
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIAELEKALAElrkELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLS 753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 204 GRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKlRVDRMAHDLeikwtENLRQECSKLRQELRLQHEEdkksamsqL 283
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEA-QIEQLKEEL-----KALREALDELRAELTLLNEE--------A 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 284 LQLKEREKNAARD--SWQKKVEDLLNQISLLKQNLElQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKE 361
Cdd:TIGR02168 820 ANLRERLESLERRiaATERRLEDLEEQIEELSEDIE-SLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE 898
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 362 AhvlafQTMEEEKEKEQRALETHLQqkhsaELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGKAMLAslrselnhqH 441
Cdd:TIGR02168 899 L-----SEELRELESKRSELRRELE-----ELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEA---------L 959
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720362587 442 AASIDLLRHSHHQELAAAKMELERSIDISRRQSKEhmcrISDLQEELRHREHHITDLDKEVQHLHENINTLTKE 515
Cdd:TIGR02168 960 ENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEE----YEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
36-389 |
2.99e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 2.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 36 NMDYSQDMHLKMSKKIAQLTKKVNEAKRTQQeyYEMELKNLQNRLEgeVAQLNEAHGKtLEELARKHHMAIEAVHSnASR 115
Cdd:TIGR02168 187 NLDRLEDILNELERQLKSLERQAEKAERYKE--LKAELRELELALL--VLRLEELREE-LEELQEELKEAEEELEE-LTA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 116 DKIKLQTELEEqYKKEKLSLEEDKNQLQLELESLkqalgdkltsaNQEIGRL-QDLVRKSEQglgsaeglISSLQDSQER 194
Cdd:TIGR02168 261 ELQELEEKLEE-LRLEVSELEEEIEELQKELYAL-----------ANEISRLeQQKQILRER--------LANLERQLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 195 LQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRvdRMAHDLEIKWTENLRQECSKLRqelrlQHEE 274
Cdd:TIGR02168 321 LEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAEL--EELESRLEELEEQLETLRSKVA-----QLEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 275 DKKSAMSQLLQLKEREK--NAARDSWQKKVEDLLNQISLL-KQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQ 351
Cdd:TIGR02168 394 QIASLNNEIERLEARLErlEDRRERLQQEIEELLKKLEEAeLKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1720362587 352 HQQRHKSLKEAHVLAF-----QTMEEEKEKEQRALETHLQQKH 389
Cdd:TIGR02168 474 EQALDAAERELAQLQArldslERLQENLEGFSEGVKALLKNQS 516
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
121-319 |
3.38e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 3.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 121 QTELEEQYKKEKLSLEEDKNQLQLELESLKQ---ALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQS 197
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKeekALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 198 ELDLTKGRLKETKDA------------LLNVEAELQQERHEH---EQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECS 262
Cdd:COG4942 98 ELEAQKEELAELLRAlyrlgrqpplalLLSPEDFLDAVRRLQylkYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720362587 263 KLRQEL-----RLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLELQ 319
Cdd:COG4942 178 ALLAELeeeraALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
46-614 |
3.40e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.91 E-value: 3.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 46 KMSKKIAQLTKKV----NEAKRTQQEYYEMELKNLQ-----NRLEGEVAQLNEAHGKTLEEL--ARKHHMAIEAVHSNAS 114
Cdd:TIGR02168 341 ELEEKLEELKEELesleAELEELEAELEELESRLEEleeqlETLRSKVAQLELQIASLNNEIerLEARLERLEDRRERLQ 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 115 RDKIKLQTELEEQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQER 194
Cdd:TIGR02168 421 QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 195 L-------------QSELDLTKGRLKEtkdaLLNVEAELQQ-------ERHEH---------EQTLATMKEEEKLRV--- 242
Cdd:TIGR02168 501 LegfsegvkallknQSGLSGILGVLSE----LISVDEGYEAaieaalgGRLQAvvvenlnaaKKAIAFLKQNELGRVtfl 576
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 243 ----------------DRMAHDLEIKWTENLRQECSKLRQ--ELRLQH---EEDKKSAMSQLLQLKE------------- 288
Cdd:TIGR02168 577 pldsikgteiqgndreILKNIEGFLGVAKDLVKFDPKLRKalSYLLGGvlvVDDLDNALELAKKLRPgyrivtldgdlvr 656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 289 ---------REKNAARDSWQKKVEDLLNQISLLKQNLELQlcqsqtslQQLQAQFTQERQRLTQELEELEEQHQQRHKSL 359
Cdd:TIGR02168 657 pggvitggsAKTNSSILERRREIEELEEKIEELEEKIAEL--------EKALAELRKELEELEEELEQLRKELEELSRQI 728
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 360 KEAH-VLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAhRESMEGFRVEMEQELQTLRFELEdEGKAMLASLRSELN 438
Cdd:TIGR02168 729 SALRkDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER-LEEAEEELAEAEAEIEELEAQIE-QLKEELKALREALD 806
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 439 HQHAAsidllrhshHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELEL 518
Cdd:TIGR02168 807 ELRAE---------LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEA 877
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 519 KGKEilrvRSESNQQMRLHEQDL----NKRLEKELDVMTADH-LREKNIMRADFN--------KTNELLKEINAALQVSL 585
Cdd:TIGR02168 878 LLNE----RASLEEALALLRSELeelsEELRELESKRSELRReLEELREKLAQLElrleglevRIDNLQERLSEEYSLTL 953
|
650 660 670
....*....|....*....|....*....|
gi 1720362587 586 EDMEEKYLMRESRPEDIQ-MIAELKSLITE 614
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARrRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
188-475 |
1.36e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.86 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 188 LQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQE 267
Cdd:COG1196 218 LKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 268 LRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLElqlcqsqtslqQLQAQFTQERQRLTQELEE 347
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE-----------EAEEELEEAEAELAEAEEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 348 LEEQHQQRHKSLKEAHVLAfqtmEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGK 427
Cdd:COG1196 367 LLEAEAELAEAEEELEELA----EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1720362587 428 AMLASLRSELNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQSK 475
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
82-590 |
4.00e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 4.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 82 GEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEE------QYKKEKLSLEEDKNQLQLELESLKQAL-- 153
Cdd:COG4913 255 EPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEElraelaRLEAELERLEARLDALREELDELEAQIrg 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 154 --GDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTL 231
Cdd:COG4913 335 ngGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAAL 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 232 ATMKEEEKlrvdrmAHDLEIKWTE----NLRQECSKLRQELR--LQHEEDKKSAMSQLLQLKEREKnaardSWQKKVEDL 305
Cdd:COG4913 415 RDLRRELR------ELEAEIASLErrksNIPARLLALRDALAeaLGLDEAELPFVGELIEVRPEEE-----RWRGAIERV 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 306 LNQISL--------------------LKQNLELQLCQSQTSLQQLQA--------------------------------- 332
Cdd:COG4913 484 LGGFALtllvppehyaaalrwvnrlhLRGRLVYERVRTGLPDPERPRldpdslagkldfkphpfrawleaelgrrfdyvc 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 333 -----QFTQERQRLTQELEELEEQHQQRH---KSLKEAHVLAFQTME--EEKEKEQRALETHLQQkHSAELQSLKDAHRE 402
Cdd:COG4913 564 vdspeELRRHPRAITRAGQVKGNGTRHEKddrRRIRSRYVLGFDNRAklAALEAELAELEEELAE-AEERLEALEAELDA 642
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 403 SMEgfRVEMEQELQTLRFELED--EGKAMLASLRSELNHQHAASIDLlrhshhqelaaakMELERSIDISRRQSKEHMCR 480
Cdd:COG4913 643 LQE--RREALQRLAEYSWDEIDvaSAEREIAELEAELERLDASSDDL-------------AALEEQLEELEAELEELEEE 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 481 ISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSEsNQQMRLHEQDLNKRLEKELDVMTADHLREK 560
Cdd:COG4913 708 LDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFA-AALGDAVERELRENLEERIDALRARLNRAE 786
|
570 580 590
....*....|....*....|....*....|
gi 1720362587 561 NIMRADFNKTNELLKEINAALQVSLEDMEE 590
Cdd:COG4913 787 EELERAMRAFNREWPAETADLDADLESLPE 816
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
58-550 |
1.24e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.96 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 58 VNEAKRTQQEYYEMELKNLQN---RLEGEVAQLNEAHGKTLEELARKHHMA-IEAVHSNASRDKI---------KLQTEL 124
Cdd:pfam15921 304 IQEQARNQNSMYMRQLSDLEStvsQLRSELREAKRMYEDKIEELEKQLVLAnSELTEARTERDQFsqesgnlddQLQKLL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 125 EEQYKKEK-LSLEEDKNQL--------QLELESLKQALGDKltsaNQEIGRLQDLVR--KSEqGLGSAEGLISSLQDSQE 193
Cdd:pfam15921 384 ADLHKREKeLSLEKEQNKRlwdrdtgnSITIDHLRRELDDR----NMEVQRLEALLKamKSE-CQGQMERQMAAIQGKNE 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 194 RLQSELDLTkGRLKETKDALLNVEAELQQERHEHEQTLATMKE-----EEKLRVdrmahdleikwTENLRQECSKLRQ-- 266
Cdd:pfam15921 459 SLEKVSSLT-AQLESTKEMLRKVVEELTAKKMTLESSERTVSDltaslQEKERA-----------IEATNAEITKLRSrv 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 267 ELRLQHEEDKKSAMSQLlqlkeREKNAARDSWQKKVEDLLNQISLLKQNLElqlcqsqtSLQQLQAQFTQERQRLTQELE 346
Cdd:pfam15921 527 DLKLQELQHLKNEGDHL-----RNVQTECEALKLQMAEKDKVIEILRQQIE--------NMTQLVGQHGRTAGAMQVEKA 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 347 ELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQ-----KHSAELQSLKDAHREsmegfRVEMEQELQTLRFE 421
Cdd:pfam15921 594 QLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKvklvnAGSERLRAVKDIKQE-----RDQLLNEVKTSRNE 668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 422 LEDEGKAMLASLRSELNHqhAASIDLLRHSHHQELAAAKMELERSIDISR-----------------RQSKEHMCRISDL 484
Cdd:pfam15921 669 LNSLSEDYEVLKRNFRNK--SEEMETTTNKLKMQLKSAQSELEQTRNTLKsmegsdghamkvamgmqKQITAKRGQIDAL 746
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 485 QEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSE----SNQQMRLHEQDLNkrLEKELD 550
Cdd:pfam15921 747 QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGElevlRSQERRLKEKVAN--MEVALD 814
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
48-642 |
3.50e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 3.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 48 SKKIAQLTKKVNEAKRTQQEYYEMELKNLQNRLEGEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEEQ 127
Cdd:PTZ00121 1327 AKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK 1406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 128 YKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGlGSAEGLISSLQDSQERlqselDLTKGRLK 207
Cdd:PTZ00121 1407 ADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEA-KKAEEAKKKAEEAKKA-----DEAKKKAE 1480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 208 ETKDAllnVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQ-ECSKLRQELRLQHEEDKKSAMSQLLQL 286
Cdd:PTZ00121 1481 EAKKA---DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKaEEAKKADEAKKAEEKKKADELKKAEEL 1557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 287 KEREKnaARDSWQKKVEDLLNQISLLKQNLELQLcqsqtslqqlqaqftqERQRLTQELEELEEQHQQRHKSLKEAHVLA 366
Cdd:PTZ00121 1558 KKAEE--KKKAEEAKKAEEDKNMALRKAEEAKKA----------------EEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 367 FQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESmEGFRVEMEQELQTlrfelEDEGKAMLASLRSELNHQHAASID 446
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE-EENKIKAAEEAKK-----AEEDKKKAEEAKKAEEDEKKAAEA 1693
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 447 LLRhshhqelaaaKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEilrv 526
Cdd:PTZ00121 1694 LKK----------EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI---- 1759
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 527 rsesnQQMRLHEQDLNKRLEKELDVMTADHLREKNIMRAdfNKTNELLKEINAALQVSLEDMEEKYLM----RESRPEDI 602
Cdd:PTZ00121 1760 -----AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRR--MEVDKKIKDIFDNFANIIEGGKEGNLVindsKEMEDSAI 1832
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1720362587 603 QMIAELKSLITERDQVIKKLIEDNKFYQLELVNRETNFNK 642
Cdd:PTZ00121 1833 KEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNK 1872
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
47-547 |
8.13e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 46.37 E-value: 8.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 47 MSKKIAQLTKKVNEAkrtqQEYYEMELKNLQNRLEGEVAQLNEAHGKTLEELARKHhMAIEAVHSnasrdkiKLQTELEE 126
Cdd:pfam12128 359 LEERLKALTGKHQDV----TAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQL-AVAEDDLQ-------ALESELRE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 127 QYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQ--EIGRLQDLVRKSEQGLGSAEGlisslqdSQERLQSELDLTKG 204
Cdd:pfam12128 427 QLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELllQLENFDERIERAREEQEAANA-------EVERLQSELRQARK 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 205 RLKETKDALLNVEAELQQERHEHEQTlatmkeeeKLRVDRMAHDLeikwTENLRQECSKLRQELrlqheedKKSAMSQLL 284
Cdd:pfam12128 500 RRDQASEALRQASRRLEERQSALDEL--------ELQLFPQAGTL----LHFLRKEAPDWEQSI-------GKVISPELL 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 285 QLKEREKnaarDSWQKKVEDLLNQISLlkqNLELQlcqsqTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHV 364
Cdd:pfam12128 561 HRTDLDP----EVWDGSVGGELNLYGV---KLDLK-----RIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLV 628
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 365 LAFQTMEEEKEKEQRALETHLQ-----QKHSAELQSLKDAHRESMEGFRVEMEQELQTLRFE---LEDEGKAMLASLRSE 436
Cdd:pfam12128 629 QANGELEKASREETFARTALKNarldlRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQlkqLDKKHQAWLEEQKEQ 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 437 LNhQHAASIDLLRHSHHQELAAAKMELERSIDISRRQSKEHmcrISDLQEElRHREHHITDLDKE-VQHLHENINTLTKE 515
Cdd:pfam12128 709 KR-EARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAE---LKALETW-YKRDLASLGVDPDvIAKLKREIRTLERK 783
|
490 500 510
....*....|....*....|....*....|....*
gi 1720362587 516 LE---LKGKEILRVRSESNQQMRLHEQDLNKRLEK 547
Cdd:pfam12128 784 IEriaVRRQEVLRYFDWYQETWLQRRPRLATQLSN 818
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
220-624 |
9.35e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.20 E-value: 9.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 220 LQQERHEHEQTLATMKEEEKlRVDRMAHDLEIKWtENLRQECSKLRQELRLQHEEDKKSAMSQLLQLKE-REKNAARDSW 298
Cdd:TIGR02168 170 YKERRKETERKLERTRENLD-RLEDILNELERQL-KSLERQAEKAERYKELKAELRELELALLVLRLEElREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 299 QKKVEDLLNQISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEEleeqhqqrhKSLKEAHVLAFQTMEEEKEKEQ 378
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANE---------ISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 379 RALETHLQQKHSAELQSLKDAHresmegfrvEMEQELQTLRFELEDEgKAMLASLRSELnhqhaasidllrhshhQELAA 458
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELA---------ELEEKLEELKEELESL-EAELEELEAEL----------------EELES 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 459 AKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHE 538
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEEL 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 539 QDLNKRLEKELDvmTADHLREKNimRADFNKTNELLKEINAALQvSLEDMEEKYlmrESRPEDIQMIAELKSLITERDQV 618
Cdd:TIGR02168 453 QEELERLEEALE--ELREELEEA--EQALDAAERELAQLQARLD-SLERLQENL---EGFSEGVKALLKNQSGLSGILGV 524
|
....*.
gi 1720362587 619 IKKLIE 624
Cdd:TIGR02168 525 LSELIS 530
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
46-416 |
2.77e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 46 KMSKKIAQLTKKVNEAKRTQQEYYEMELKNLQNRLEgEVAQLNEAHGKTlEELARKHHMAIEAVHSNASRDKIKLQTELE 125
Cdd:PTZ00121 1353 EAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE-EKKKADEAKKKA-EEDKKKADELKKAAAAKKKADEAKKKAEEK 1430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 126 EQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEglissLQDSQERLQSELDLTKGR 205
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADE-----AKKKAEEAKKKADEAKKA 1505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 206 LKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMSQLLQ 285
Cdd:PTZ00121 1506 AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEE 1585
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 286 LKEREKNAARDSWQKKVEDLLNQISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVL 365
Cdd:PTZ00121 1586 AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAE 1665
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1720362587 366 AFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQELQ 416
Cdd:PTZ00121 1666 EAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKK 1716
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
94-317 |
4.51e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 43.66 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 94 TLEELARKHHMAIEAVHSNASRDKIKLQTELEeQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQeigrLQDLVRK 173
Cdd:pfam10174 440 TLEEALSEKERIIERLKEQREREDRERLEELE-SLKKENKDLKEKVSALQPELTEKESSLIDLKEHASS----LASSGLK 514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 174 SEQGLGSAEGLISSLQDSQERLQSEL------DLTKGRLKETKDALLNVEAELQQERHEH-------EQTLATMK--EEE 238
Cdd:pfam10174 515 KDSKLKSLEIAVEQKKEECSKLENQLkkahnaEEAVRTNPEINDRIRLLEQEVARYKEESgkaqaevERLLGILRevENE 594
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720362587 239 KLRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMsQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLE 317
Cdd:pfam10174 595 KNDKDKKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQ-LLEEARRREDNLADNSQQLQLEELMGALEKTRQELD 672
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
48-317 |
5.03e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 5.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 48 SKKIAQLTKKVNEAKRTQQEyyemeLKNLQNRLEGEVAQLNEAHGKTLEELARKHHM--AIEAVHSNASRDKIKLQTELE 125
Cdd:TIGR02169 708 SQELSDASRKIGEIEKEIEQ-----LEQEEEKLKERLEELEEDLSSLEQEIENVKSElkELEARIEELEEDLHKLEEALN 782
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 126 EQYKKeklsleedknqlqlELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGR 205
Cdd:TIGR02169 783 DLEAR--------------LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 206 LKETKDALLNVEA---ELQQERHEHEQTLATMKEE-EKLRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMS 281
Cdd:TIGR02169 849 IKSIEKEIENLNGkkeELEEELEELEAALRDLESRlGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEA 928
|
250 260 270
....*....|....*....|....*....|....*.
gi 1720362587 282 QLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLE 317
Cdd:TIGR02169 929 LEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVE 964
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
119-517 |
8.28e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 8.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 119 KLQTELEEQYKKEKLSLEEDKNQLQlELESLKQALGDKLTSANQEIGRLQDLvrksEQGLGSAEGLISSLQDSQERLQSE 198
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELK-ELEEELKEAEEKEEEYAELQEELEEL----EEELEELEAELEELREELEKLEKL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 199 LDL--TKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRmahdleikwtENLRQECSKLRQELRLQHEEDK 276
Cdd:COG4717 125 LQLlpLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAEL----------AELQEELEELLEQLSLATEEEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 277 KSAMSQLLQLKEREKNA--ARDSWQKKVEDLLNQISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQ 354
Cdd:COG4717 195 QDLAEELEELQQRLAELeeELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 355 RHKSL---------------KEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFrVEMEQELQTLR 419
Cdd:COG4717 275 IAGVLflvlgllallflllaREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLEL-LDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 420 FELEDEGKAM-----LASLRSELNHQHAASIDLLR-----HSHHQELAAAKMELERSIDISRRQSKEHMCRIS--DLQEE 487
Cdd:COG4717 354 REAEELEEELqleelEQEIAALLAEAGVEDEEELRaaleqAEEYQELKEELEELEEQLEELLGELEELLEALDeeELEEE 433
|
410 420 430
....*....|....*....|....*....|
gi 1720362587 488 LRHREHHITDLDKEVQHLHENINTLTKELE 517
Cdd:COG4717 434 LEELEEELEELEEELEELREELAELEAELE 463
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
115-414 |
1.24e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.27 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 115 RDKIKLQTELEEQYKKEKL----SLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQD 190
Cdd:pfam02463 186 AELIIDLEELKLQELKLKEqakkALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 191 SQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATM------KEEEKLRVDRMAHDLEIKWTENLRQECSKL 264
Cdd:pfam02463 266 KLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKvddeekLKESEKEKKKAEKELKKEKEEIEELEKELK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 265 RQELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQE 344
Cdd:pfam02463 346 ELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEK 425
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 345 LEELEEQHQQRHKSLKEahvLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQE 414
Cdd:pfam02463 426 KEELEILEEEEESIELK---QGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSR 492
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
361-627 |
1.28e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.23 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 361 EAHVLAFQTMEEEKEKEQRALETHLQQKHSAElqslkdAHRESMEGFRVEMEQELQTLRFELEDEGKAMlaslrselnhq 440
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAELEELE------AELAELEAELEELRLELEELELELEEAQAEE----------- 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 441 haasidllrhshhQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKG 520
Cdd:COG1196 291 -------------YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 521 KEILRV---RSESNQQMRLHEQDLNKRLEKELDVMTA---DHLREKNIMRADFNKTNELLKEINAALQVSLEDMEEKYLM 594
Cdd:COG1196 358 AELAEAeeaLLEAEAELAEAEEELEELAEELLEALRAaaeLAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEE 437
|
250 260 270
....*....|....*....|....*....|...
gi 1720362587 595 RESRPEDIQMIAELKSLITERDQVIKKLIEDNK 627
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAELLE 470
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
62-550 |
1.99e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.63 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 62 KRTQQEYYEMELKNLQNRLEGEVAQLNEAhgktLEELARKHHMAIEAVHSNASRDKIKLQtELEEQYKKEklsLEEDKNQ 141
Cdd:pfam05483 170 KTKKYEYEREETRQVYMDLNNNIEKMILA----FEELRVQAENARLEMHFKLKEDHEKIQ-HLEEEYKKE---INDKEKQ 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 142 LQLELESLKQAlGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKDALLNVEAELQ 221
Cdd:pfam05483 242 VSLLLIQITEK-ENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQ 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 222 QERHE----HEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQElRLQHEEDKKSAMSQLLQLKEREknaards 297
Cdd:pfam05483 321 IATKTicqlTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQ-RLEKNEDQLKIITMELQKKSSE------- 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 298 wqkkvedlLNQISLLKQNLELQL------CQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLK--EAHVLAFQT 369
Cdd:pfam05483 393 --------LEEMTKFKNNKEVELeelkkiLAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHdlEIQLTAIKT 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 370 MEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGfrVEMEQELQTLRFELEDEGKAMLASLRSElnHQHAASIDLLR 449
Cdd:pfam05483 465 SEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLEN--KELTQEASDMTLELKKHQEDIINCKKQE--ERMLKQIENLE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 450 HSHHQelaaAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSE 529
Cdd:pfam05483 541 EKEMN----LRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQE 616
|
490 500 510
....*....|....*....|....*....|.
gi 1720362587 530 S----------NQQMRLHEQDLNKrLEKELD 550
Cdd:pfam05483 617 NkalkkkgsaeNKQLNAYEIKVNK-LELELA 646
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
262-550 |
2.55e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.21 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 262 SKLRQEL-RLQHEEDKKSAMSQLLQLKE--------REKNAARdswqKKVEDLLNQISLLKQNLElQLCQSQTSLQQLQA 332
Cdd:TIGR02169 194 DEKRQQLeRLRREREKAERYQALLKEKReyegyellKEKEALE----RQKEAIERQLASLEEELE-KLTEEISELEKRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 333 QFTQERQRLTQELEELEEQHQQRHKS-LKEAHVLAFQTMEEEKEKEQRALEThlqQKHSAELQSLKDAHRESMEGFRVEM 411
Cdd:TIGR02169 269 EIEQLLEELNKKIKDLGEEEQLRVKEkIGELEAEIASLERSIAEKERELEDA---EERLAKLEAEIDKLLAEIEELEREI 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 412 EQElQTLRFELEDEgkamLASLRSELN--HQHAASIDllrhSHHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELR 489
Cdd:TIGR02169 346 EEE-RKRRDKLTEE----YAELKEELEdlRAELEEVD----KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720362587 490 HREHHITDLDKEVQHLHENINTLTKELELKGKEI--LRVRSESNQQMRLHEQDLNKRLEKELD 550
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIkkQEWKLEQLAADLSKYEQELYDLKEEYD 479
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
48-547 |
2.88e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.11 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 48 SKKIAQLTKKVNEAKRTQQEYYEMELKNLQNRLEGEVAQLNEAHGKTLEE--LARKHHMAIEAVHSNASRDKIKLQTELE 125
Cdd:TIGR00618 299 IKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQtlHSQEIHIRDAHEVATSIREISCQQHTLT 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 126 EQYKKEKLSLEEDKNQLQL---ELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSE---- 198
Cdd:TIGR00618 379 QHIHTLQQQKTTLTQKLQSlckELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEklek 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 199 --LDLTKGRLKETKDALLNVEAELQQE---RHEHEQTLATMKEEEKLRVDRMAH-DLEIKWTENLRQECSKLRQELR--L 270
Cdd:TIGR00618 459 ihLQESAQSLKEREQQLQTKEQIHLQEtrkKAVVLARLLELQEEPCPLCGSCIHpNPARQDIDNPGPLTRRMQRGEQtyA 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 271 QHEEDKKSAMSQLLQLKER------EKNAARDSWQK----------KVEDLLNQISLLKQNLELQLCQSQTSLQQLQAQF 334
Cdd:TIGR00618 539 QLETSEEDVYHQLTSERKQraslkeQMQEIQQSFSIltqcdnrskeDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALL 618
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 335 TQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQ-TMEEEKEKEQRALETHLQQKHSAELQSLKDA---HRESMEGFRVE 410
Cdd:TIGR00618 619 RKLQPEQDLQDVRLHLQQCSQELALKLTALHALQlTLTQERVREHALSIRVLPKELLASRQLALQKmqsEKEQLTYWKEM 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 411 MEQELQTLRFELEDEGKamlaslrselNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRH 490
Cdd:TIGR00618 699 LAQCQTLLRELETHIEE----------YDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNE 768
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720362587 491 REHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEK 547
Cdd:TIGR00618 769 EVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCET 825
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
52-627 |
5.75e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 52 AQLTKKVNEAKRTQQEYYEMELKNLQNRLEGEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEEQYKKE 131
Cdd:PTZ00121 1202 AEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAD 1281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 132 KLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKD 211
Cdd:PTZ00121 1282 ELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA 1361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 212 ALLNVEA-ELQQERHEHEQTLATMKEEEKLRVD----------RMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSA- 279
Cdd:PTZ00121 1362 AEEKAEAaEKKKEEAKKKADAAKKKAEEKKKADeakkkaeedkKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAe 1441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 280 ---MSQLLQLKEREKNAARDSWQK-----KVEDLLNQISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQ 351
Cdd:PTZ00121 1442 eakKADEAKKKAEEAKKAEEAKKKaeeakKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 352 HQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRE----SMEGFRVEMEQELQTLRFE-----L 422
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAeedkNMALRKAEEAKKAEEARIEevmklY 1601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 423 EDEGKAMLASLRSELNHQHAAsiDLLRHSHH-----QELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITD 497
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKA--EELKKAEEekkkvEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEE 1679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 498 LDKEVQHLHENINTLTKELELKgKEILRVRSESNQQMRLHEQdlnKRLEKELDVMTADHLREKNimRADFNKTNELLKEI 577
Cdd:PTZ00121 1680 AKKAEEDEKKAAEALKKEAEEA-KKAEELKKKEAEEKKKAEE---LKKAEEENKIKAEEAKKEA--EEDKKKAEEAKKDE 1753
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1720362587 578 NAALQVSLEDMEEKYLMRESRPEDIQMIAE-LKSLITERDQVIKKLIEDNK 627
Cdd:PTZ00121 1754 EEKKKIAHLKKEEEKKAEEIRKEKEAVIEEeLDEEDEKRRMEVDKKIKDIF 1804
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
72-295 |
6.18e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 6.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 72 ELKNLQNRLEGEVAQLNEAhGKTLEELARKHHMAIEAVhsNASRDKIKLQTELEEQYKKEKLSLEEDKNQLQLELESLKQ 151
Cdd:COG4942 21 AAAEAEAELEQLQQEIAEL-EKELAALKKEEKALLKQL--AALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 152 ALGDKLTSANQEIGRLQDLVRKSEQGL----GSAEGLISSLQDSQERLQSELDLTKgRLKETKDALLNVEAELQQERHEH 227
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720362587 228 EQTLATMKEE-EKLRVDRMAHDLEIKwteNLRQECSKLRQELRlQHEEDKKSAMSQLLQLKEREKNAAR 295
Cdd:COG4942 177 EALLAELEEErAALEALKAERQKLLA---RLEKELAELAAELA-ELQQEAEELEALIARLEAEAAAAAE 241
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
157-315 |
6.20e-03 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 39.36 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 157 LTSANQEigrLQDLVRKSEQGLGSAEGLISSLQDSQ---------------ERLQSELDLTKGRLKETKDALLNVEAELQ 221
Cdd:pfam09787 2 LESAKQE---LADYKQKAARILQSKEKLIASLKEGSgvegldsstaltlelEELRQERDLLREEIQKLRGQIQQLRTELQ 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362587 222 QERHEHEQTLATMKE-----EEKLRVDRMAHdleikwtENLRQECSKLRQELRLQHEEDKKSAMSQLLQLKEREknaard 296
Cdd:pfam09787 79 ELEAQQQEEAESSREqlqelEEQLATERSAR-------REAEAELERLQEELRYLEEELRRSKATLQSRIKDRE------ 145
|
170
....*....|....*....
gi 1720362587 297 swqKKVEDLLNQISLLKQN 315
Cdd:pfam09787 146 ---AEIEKLRNQLTSKSQS 161
|
|
| |
