|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
266-1067 |
1.35e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.41 E-value: 1.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 266 QLKDMKAKYEGASAEVGKLRNQIKQNEMivEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKL- 344
Cdd:TIGR02168 214 RYKELKAELRELELALLVLRLEELREEL--EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELy 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 345 ALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQhiKLEEHEQVKSRLEqksgELGK 424
Cdd:TIGR02168 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEE--LKEELESLEAELE----ELEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 425 KITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEME 504
Cdd:TIGR02168 366 ELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 505 KLLLEndslsKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVP-- 582
Cdd:TIGR02168 446 EEELE-----ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLsg 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 583 --------VKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKD---------------KNEILKRNLENTQNQI 639
Cdd:TIGR02168 521 ilgvlselISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNElgrvtflpldsikgtEIQGNDREILKNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 640 KAEYISLAEHEAK----MSSLSQSMRKVQD-SNAEILANYRKGQEEIVTL------------------HAEIKAQKKELD 696
Cdd:TIGR02168 601 LGVAKDLVKFDPKlrkaLSYLLGGVLVVDDlDNALELAKKLRPGYRIVTLdgdlvrpggvitggsaktNSSILERRREIE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 697 TIQECIkvkyapivsfEECERKFKATEKELKDQLSEQTQKysvsEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSH 776
Cdd:TIGR02168 681 ELEEKI----------EELEEKIAELEKALAELRKELEEL----EEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 777 EMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEEL 856
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 857 KNMQRCYEKEQQTVTKLHQLLE-----------NQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKL 925
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEelsedieslaaEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 926 QSEVQNTKQALKKLETRevvdLSKYKATKSDLETQISSLNEKLANL-NRKYEEVCEEVLHAKKKEISAKDEKELLHFSIE 1004
Cdd:TIGR02168 907 ESKRSELRRELEELREK----LAQLELRLEGLEVRIDNLQERLSEEySLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622953786 1005 ----------QEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDV-ERLKQALNGLSQLTYTSG 1067
Cdd:TIGR02168 983 elgpvnlaaiEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERFKDTfDQVNENFQRVFPKLFGGG 1056
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
351-861 |
1.16e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 72.40 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 351 EKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAqhiKLEEHEQVKSRLEQKSGELGKKITELT 430
Cdd:PRK03918 182 EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVK---ELEELKEEIEELEKELESLEGSKRKLE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 431 LKNQTLQKEIEKVYLDNKLLKEQAHNLT---------IEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKL 501
Cdd:PRK03918 259 EKIRELEERIEELKKEIEELEEKVKELKelkekaeeyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 502 EMEKLLLENDSLSKDVNRLET----------VFVPPEKHEKEVTALksSIVELKKQLSELKKKCGEDQEKIHALTSENSN 571
Cdd:PRK03918 339 RLEELKKKLKELEKRLEELEErhelyeeakaKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 572 LKKMMSNEYVPVKTHEEIKM---TLNNTLAKTNKELL--DVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAE--YI 644
Cdd:PRK03918 417 LKKEIKELKKAIEELKKAKGkcpVCGRELTEEHRKELleEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKEseLI 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 645 SLAEHEAKMSSLSQSMRKVQDSNAEILAN-YRKGQEEIVTLHAEIKAQKKELDTIQECIKVKyapivsfEECERKFKATE 723
Cdd:PRK03918 497 KLKELAEQLKELEEKLKKYNLEELEKKAEeYEKLKEKLIKLKGEIKSLKKELEKLEELKKKL-------AELEKKLDELE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 724 KELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEI 803
Cdd:PRK03918 570 EELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL 649
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622953786 804 KNVKEKL-VEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQR 861
Cdd:PRK03918 650 EELEKKYsEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
493-1135 |
1.58e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.40 E-value: 1.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 493 TQKYTEKKLEMEKLLLENDSLSKD--VNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENS 570
Cdd:TIGR02168 212 AERYKELKAELRELELALLVLRLEelREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 571 NLKKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHE 650
Cdd:TIGR02168 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 651 AKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVS--FEECERKFKATEKELKD 728
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEaeLKELQAELEELEEELEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 729 QLSEQTQKysvsEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELnKQLKDLSQKYAEIKNVKE 808
Cdd:TIGR02168 452 LQEELERL----EEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV-KALLKNQSGLSGILGVLS 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 809 KLVEENAKQTSEILAV-----QNLL-QKQHVPLEQVEALKKSLNG-------------TIENLKEELKNMQRCYEKEQ-- 867
Cdd:TIGR02168 527 ELISVDEGYEAAIEAAlggrlQAVVvENLNAAKKAIAFLKQNELGrvtflpldsikgtEIQGNDREILKNIEGFLGVAkd 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 868 --QTVTKLHQLLENQKNSSVP---LAEHLQIKEAFEKEVGII--------------------KASLREKEEESQNKMEEV 922
Cdd:TIGR02168 607 lvKFDPKLRKALSYLLGGVLVvddLDNALELAKKLRPGYRIVtldgdlvrpggvitggsaktNSSILERRREIEELEEKI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 923 SKLQSEVQNTKQALKKLETREV---VDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELL 999
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEeleEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1000 HFSI-----------------EQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQL 1062
Cdd:TIGR02168 767 EERLeeaeeelaeaeaeieelEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ 846
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953786 1063 tytsgnpTKRQSQLIDTLQHQVKSLEQQLADADRQHQEVIAIYRT-----HLLSAAQGHMDEDVQEALLQIIQMRQGL 1135
Cdd:TIGR02168 847 -------IEELSEDIESLAAEIEELEELIEELESELEALLNERASleealALLRSELEELSEELRELESKRSELRREL 917
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
187-978 |
3.22e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 68.24 E-value: 3.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 187 ELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKehltseaASGNHRLTEELKDQ 266
Cdd:PTZ00121 1167 EEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKK-------AEAVKKAEEAKKDA 1239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 267 LKDMKAKYEGASAEVGKLRN-QIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLA 345
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEaRMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADE 1319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 346 LSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHIKLEEHEQVKSRLEQKSGELGKK 425
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKK 1399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 426 ITELTLKNQTLQKEIEKvyldnKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEMEK 505
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAA-----KKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE 1474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 506 LllenDSLSKDVNRLETVFVPPEKHEKEVTALKSSiVELKKQLSELKKkcGEDQEKIHALTSENSNLKKMMSNEYVPVKT 585
Cdd:PTZ00121 1475 A----KKKAEEAKKADEAKKKAEEAKKKADEAKKA-AEAKKKADEAKK--AEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 586 HEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQD 665
Cdd:PTZ00121 1548 ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 666 SNAEilanyRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEEcERKFKATE----KELKDQLSEQTQKYSVSE 741
Cdd:PTZ00121 1628 AEEE-----KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE-EDKKKAEEakkaEEDEKKAAEALKKEAEEA 1701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 742 EEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDlSQKYAEIKNVKEKLVEENAKQTSEI 821
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE-KKKIAHLKKEEEKKAEEIRKEKEAV 1780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 822 LAvQNLLQKQHVPLEQVEALKKSLNGTIENLKEElknmqrcyEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAfeKEV 901
Cdd:PTZ00121 1781 IE-EELDEEDEKRRMEVDKKIKDIFDNFANIIEG--------GKEGNLVINDSKEMEDSAIKEVADSKNMQLEEA--DAF 1849
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622953786 902 GIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDlskykatKSDLETQISSLNEKLANLNRKYEEV 978
Cdd:PTZ00121 1850 EKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKID-------KDDIEREIPNNNMAGKNNDIIDDKL 1919
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
272-1050 |
1.89e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.47 E-value: 1.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 272 AKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKG----RKVKEMEGQAKELLAKLA-L 346
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGyellKEKEALERQKEAIERQLAsL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 347 SIPAEKFENMKSSLSNEVNEKAKKLVEMERE-HEKSLSEIRQLKRELENVKAKLAQ-HIKLEEHEQVKSRLEQKSGELGK 424
Cdd:TIGR02169 250 EEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASlERSIAEKERELEDAEERLAKLEA 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 425 KITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLkvsEDMKKSHDAiiddLNRKVLDVTQKYTEKKLEME 504
Cdd:TIGR02169 330 EIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEL---EEVDKEFAE----TRDELKDYREKLEKLKREIN 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 505 KLLLENDSLSKDVNRLETvfvppekhekEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVPVK 584
Cdd:TIGR02169 403 ELKRELDRLQEELQRLSE----------ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 585 THEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIkAEYISLAEHEAKMSSLSQSMR--- 661
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTV-AQLGSVGERYATAIEVAAGNRlnn 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 662 ------KVQDSNAEILANYRKGQEEIVTLHaEIKAQKKELDTIQECIKVKYApiVSFEECERKFkatekelkdqlsEQTQ 735
Cdd:TIGR02169 552 vvveddAVAKEAIELLKRRKAGRATFLPLN-KMRDERRDLSILSEDGVIGFA--VDLVEFDPKY------------EPAF 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 736 KYSVSEEEVKKNKQENDRL--KKEIFTLQKDLRDKTVLIEKSH--------------EMERALSRKTDELNKQLKDLSQK 799
Cdd:TIGR02169 617 KYVFGDTLVVEDIEAARRLmgKYRMVTLEGELFEKSGAMTGGSraprggilfsrsepAELQRLRERLEGLKRELSSLQSE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 800 YAEIKNVKEKL---VEENAKQTSEILAVQNLLQKQHVP----LEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTK 872
Cdd:TIGR02169 697 LRRIENRLDELsqeLSDASRKIGEIEKEIEQLEQEEEKlkerLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 873 LHQLLEN--QKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREvvdlSKY 950
Cdd:TIGR02169 777 LEEALNDleARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQI----KSI 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 951 KATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKEllhfSIEQEIKDQKERCDKSLTTITELQRRIQE 1030
Cdd:TIGR02169 853 EKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR----ELERKIEELEAQIEKKRKRLSELKAKLEA 928
|
810 820
....*....|....*....|
gi 1622953786 1031 SAKQIEAKDNKITELLNDVE 1050
Cdd:TIGR02169 929 LEEELSEIEDPKGEDEEIPE 948
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
26-858 |
3.30e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.69 E-value: 3.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 26 DLKERLRKIQQeqRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALKNRFKYFESDHLGSG 105
Cdd:TIGR02168 217 ELKAELRELEL--ALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 106 SHFSNRKEDMLLKQGQMYMADSQctspgipahmqsrsmlrPLELSLPSQTSYSENEILKKELEAMRTFCESAKQDRLKLQ 185
Cdd:TIGR02168 295 NEISRLEQQKQILRERLANLERQ-----------------LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 186 NELAHKVAECKALalecERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTseaasgnhRLTEELKD 265
Cdd:TIGR02168 358 AELEELEAELEEL----ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE--------RLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 266 QLKDMKakyegasaevgklRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLA 345
Cdd:TIGR02168 426 LLKKLE-------------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 346 LsipAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIR---QLKRELENVKAKLAQHIKLEEHEQVKSRLE-QKSGE 421
Cdd:TIGR02168 493 S---LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdeGYEAAIEAALGGRLQAVVVENLNAAKKAIAfLKQNE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 422 LGK-----------------KITELTLKNQTLQKEIEKVYLDNKLLK---------------EQAHNLTIEMKNHYVPLK 469
Cdd:TIGR02168 570 LGRvtflpldsikgteiqgnDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvddlDNALELAKKLRPGYRIVT 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 470 VSEDMKKSHDAII---DDLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLEtvfvppekheKEVTALKSSIVELKK 546
Cdd:TIGR02168 650 LDGDLVRPGGVITggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELR----------KELEELEEELEQLRK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 547 QLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNE 626
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 627 ILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKY 706
Cdd:TIGR02168 800 ALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALL 879
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 707 -------APIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDK-TVLIEKSHEM 778
Cdd:TIGR02168 880 nerasleEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEySLTLEEAEAL 959
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 779 ERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEilavQNLLQKQHvplEQVEALKKSLNGTIENLKEELKN 858
Cdd:TIGR02168 960 ENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKER----YDFLTAQK---EDLTEAKETLEEAIEEIDREARE 1032
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
353-1051 |
4.49e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.39 E-value: 4.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 353 FENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHIKLEEHEQVKSRLEQKSGELGKKITELTLK 432
Cdd:PTZ00121 1081 FDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 433 NQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHyvpLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEMEKLLLENDS 512
Cdd:PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEE---LRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKK 1237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 513 LSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNlkkmmsneyvpvKTHEEIKMT 592
Cdd:PTZ00121 1238 DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAK------------KAEEKKKAD 1305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 593 LNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAeyislAEHEAKMSSLSQSMRKVQDSNAEILA 672
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA-----AADEAEAAEEKAEAAEKKKEEAKKKA 1380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 673 NYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEK--ELKDQLSEQTQKYSVSEEEVKKNKQE 750
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKadEAKKKAEEAKKADEAKKKAEEAKKAE 1460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 751 NDRLKKEIFTLQKDLRDKTVLIEKSHEMERA---LSRKTDELNKQlKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNL 827
Cdd:PTZ00121 1461 EAKKKAEEAKKADEAKKKAEEAKKADEAKKKaeeAKKKADEAKKA-AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA 1539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 828 LQKQHV----PLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGI 903
Cdd:PTZ00121 1540 KKAEEKkkadELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 904 IKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVL 983
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 984 HAKKKEISAKDEKELLHfSIEQEIKDQKERCDKS--LTTITELQRRIQESAKQIEAKDNKITELLNDVER 1051
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKK-KAEELKKAEEENKIKAeeAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEK 1768
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
607-1045 |
9.56e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.16 E-value: 9.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 607 VKKKFEDINQEFVKIKDKNEILKRNLENtqnqIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHA 686
Cdd:PRK03918 198 KEKELEEVLREINEISSELPELREELEK----LEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKK 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 687 EIKAQKKELDTIQEcIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKkEIFTLQKDLR 766
Cdd:PRK03918 274 EIEELEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-ELKKKLKELE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 767 DKTVLIEKSHE--------MERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQV 838
Cdd:PRK03918 352 KRLEELEERHElyeeakakKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEEL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 839 EA-------------------LKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEK 899
Cdd:PRK03918 432 KKakgkcpvcgrelteehrkeLLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 900 EVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLEtrevvdlsKYKATKSDLETQISSLNEKLANLNRKYEEV- 978
Cdd:PRK03918 512 LKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE--------ELKKKLAELEKKLDELEEELAELLKELEELg 583
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622953786 979 --CEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITEL 1045
Cdd:PRK03918 584 feSVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEEL 652
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
29-856 |
1.20e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 29 ERLRKIQQEQRilldkvnglQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALknrfkyfESDHLGSGSHF 108
Cdd:TIGR02168 213 ERYKELKAELR---------ELELALLVLRLEELREELEELQEELKEAEEELEELTAELQEL-------EEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 109 SNRKEDMLLKQGQMYMADSQCT--SPGIPAHMQSRSMLR--PLELSLPSQTSYSENEILKKELEAMRTFCESAKQDRLKL 184
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISrlEQQKQILRERLANLErqLEELEAQLEELESKLDELAEELAELEEKLEELKEELESL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 185 QNELAHKVAECKALalecERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTseaasgnhRLTEELK 264
Cdd:TIGR02168 357 EAELEELEAELEEL----ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE--------RLQQEIE 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 265 DQLKDMKakyegasaevgklRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKL 344
Cdd:TIGR02168 425 ELLKKLE-------------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARL 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 345 ALsipAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIR---QLKRELENVKAKLAQHIKLEEHEQVKSRLE-QKSG 420
Cdd:TIGR02168 492 DS---LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdeGYEAAIEAALGGRLQAVVVENLNAAKKAIAfLKQN 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 421 ELGKkiteLTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKK--SHDAIIDDLnrkvldvtqkytE 498
Cdd:TIGR02168 569 ELGR----VTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYllGGVLVVDDL------------D 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 499 KKLEMEKLLLENDSL-SKDVNRLETVFVPPEKHEKEvtalKSSIVELKKQLSELKKKCGEDQEKIHALTsensnlkkmms 577
Cdd:TIGR02168 633 NALELAKKLRPGYRIvTLDGDLVRPGGVITGGSAKT----NSSILERRREIEELEEKIEELEEKIAELE----------- 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 578 neyvpvktheeikmtlnntlaktnKELLDVKKKFEDINQEFVKikdkneiLKRNLENTQNQIKAEYISLAEHEAKMSSLS 657
Cdd:TIGR02168 698 ------------------------KALAELRKELEELEEELEQ-------LRKELEELSRQISALRKDLARLEAEVEQLE 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 658 QSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKY 737
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 738 SVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQ 817
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
810 820 830
....*....|....*....|....*....|....*....
gi 1622953786 818 TSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEEL 856
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL 945
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
410-1035 |
3.75e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.80 E-value: 3.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 410 QVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKV 489
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 490 LDVTQKYTEKKLEMEKllleNDSLSKDVNRLEtvfvppekheKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSEN 569
Cdd:TIGR04523 197 LKLELLLSNLKKKIQK----NKSLESQISELK----------KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQ 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 570 SNLKKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKfedinqefvKIKDKNEILKRNLENTQNQIKAEYISLAEH 649
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQ---------KEQDWNKELKSELKNQEKKLEEIQNQISQN 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 650 EAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQ 729
Cdd:TIGR04523 334 NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQ 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 730 LSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKshemeraLSRKTDELNKQLKDLSQKYAEIKNVKEK 809
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKN-------LDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 810 LVEENAKQTSEIlavqnllqkqhvpleqvealkKSLNGTIENLKEELKNMQRCYEKEQQTVTKLhQLLENQKNSSVPLAE 889
Cdd:TIGR04523 487 KQKELKSKEKEL---------------------KKLNEEKKELEEKVKDLTKKISSLKEKIEKL-ESEKKEKESKISDLE 544
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 890 HLQIKEAFEKEVGIIKASLREKEEESqnkmeevsklqSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLA 969
Cdd:TIGR04523 545 DELNKDDFELKKENLEKEIDEKNKEI-----------EELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKIS 613
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 970 NLNRKYEEVCEEvlhaKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQI 1035
Cdd:TIGR04523 614 SLEKELEKAKKE----NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKI 675
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
260-1038 |
5.33e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 5.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 260 TEELKDQLKDMKAKYEGASAEVGKLRNQIKQNEmivEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKE 339
Cdd:PTZ00121 1093 TEEAFGKAEEAKKTETGKAEEARKAEEAKKKAE---DARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEA 1169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 340 LLAKLALSI-PAEKFENMKSSLSNEVNEKAKKLVEMER-EHEKSLSEIRQLKRELENVKAKLAQHIKLEEHEQVKSRLEQ 417
Cdd:PTZ00121 1170 RKAEDAKKAeAARKAEEVRKAEELRKAEDARKAEAARKaEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEER 1249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 418 KSGELGKKITELTLKNQTLQKEIEKvyldnkllkeqahnltiEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYT 497
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAAIKA-----------------EEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAE 1312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 498 EKKlemeklllENDSLSKDVnrletvfvppEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMS 577
Cdd:PTZ00121 1313 EAK--------KADEAKKKA----------EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 578 NEYvpvKTHEEIKMTlnntlAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLS 657
Cdd:PTZ00121 1375 EAK---KKADAAKKK-----AEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA 1446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 658 QSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQ-KKELDTIQecikvKYAPIVSFEECERKFKATEKELKDQLSEQTQK 736
Cdd:PTZ00121 1447 DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEeAKKADEAK-----KKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 737 YSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKdlSQKYAEIKNVKEKLVEENAK 816
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMA--LRKAEEAKKAEEARIEEVMK 1599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 817 QTSEILAVQ-NLLQKQHVPLEQVEALKKSlngtienlKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPlAEHLQIKE 895
Cdd:PTZ00121 1600 LYEEEKKMKaEEAKKAEEAKIKAEELKKA--------EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK-AAEEAKKA 1670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 896 AFEKEvgiiKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKY 975
Cdd:PTZ00121 1671 EEDKK----KAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA 1746
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622953786 976 EEvceevlhAKKKEisaKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAK 1038
Cdd:PTZ00121 1747 EE-------AKKDE---EEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
429-1054 |
1.64e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.88 E-value: 1.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 429 LTLKNQTLQKEIEKvylDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEMEKLll 508
Cdd:TIGR04523 27 IANKQDTEEKQLEK---KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKL-- 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 509 eNDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVPVKTHEE 588
Cdd:TIGR04523 102 -NSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEK 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 589 IKMTLNNTLAKTNKELLDVKKKFEDI---NQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQD 665
Cdd:TIGR04523 181 EKLNIQKNIDKIKNKLLKLELLLSNLkkkIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 666 SNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKvkyapivsfEECERKFKATEKELKDQLSEQTQKYSVSEEEVK 745
Cdd:TIGR04523 261 EQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEIS---------DLNNQKEQDWNKELKSELKNQEKKLEEIQNQIS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 746 KNKQENDRLKKEIFTLQKDLRDKTvliEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENakqtSEILAVQ 825
Cdd:TIGR04523 332 QNNKIISQLNEQISQLKKELTNSE---SENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLE----SKIQNQE 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 826 NLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLqikEAFEKEVGIIK 905
Cdd:TIGR04523 405 KLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQL---KVLSRSINKIK 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 906 ASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYK---ATKSDLETQISSLNEKLANLN---------- 972
Cdd:TIGR04523 482 QNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEkleSEKKEKESKISDLEDELNKDDfelkkenlek 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 973 --RKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVE 1050
Cdd:TIGR04523 562 eiDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKN 641
|
....
gi 1622953786 1051 RLKQ 1054
Cdd:TIGR04523 642 KLKQ 645
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
164-633 |
3.36e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 3.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 164 KKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKE--DSDEQIKQLEDALKDVQ--KRMYESEGKVKQMQT 239
Cdd:PTZ00121 1418 KKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEakKKAEEAKKADEAKKKAEeaKKADEAKKKAEEAKK 1497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 240 HFLALKEHLTSEAASGNHRLTEELKDQLKDMKAKYEGASAEVGKLRNQIKQNEM-IVEEFKRDEGKLIEENKRLQKELSM 318
Cdd:PTZ00121 1498 KADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELkKAEELKKAEEKKKAEEAKKAEEDKN 1577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 319 CEMEREKKGRKVKEMEGQAKELLAKLALSIPAEKF-----ENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELE 393
Cdd:PTZ00121 1578 MALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAkkaeeAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEE 1657
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 394 NVKAKLAQHIKLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIE-----MKNHYVPL 468
Cdd:PTZ00121 1658 ENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAeeenkIKAEEAKK 1737
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 469 KVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQL 548
Cdd:PTZ00121 1738 EAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEG 1817
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 549 SELkkkCGEDQEKIHALTSENSNLKKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEIL 628
Cdd:PTZ00121 1818 NLV---INDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKID 1894
|
....*
gi 1622953786 629 KRNLE 633
Cdd:PTZ00121 1895 KDDIE 1899
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
181-703 |
4.34e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 57.77 E-value: 4.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 181 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTseaasgnhrlT 260
Cdd:PRK03918 229 EVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIK----------L 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 261 EELKDQLKDMKAKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEmEREKKGRKVKEMEGQAKEL 340
Cdd:PRK03918 299 SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELE-ERHELYEEAKAKKEELERL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 341 LAKLAlSIPAEKFENMKSSLSN---EVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAK---LAQHIKLEEHEQVKSR 414
Cdd:PRK03918 378 KKRLT-GLTPEKLEKELEELEKakeEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvCGRELTEEHRKELLEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 415 LEQKSGELGKKITELTLKNQTLQKEIEKVylDNKLLKEQAhnlTIEMKNHYVPLKVSEDMKKSHDAiiddlnrkvldvtQ 494
Cdd:PRK03918 457 YTAELKRIEKELKEIEEKERKLRKELREL--EKVLKKESE---LIKLKELAEQLKELEEKLKKYNL-------------E 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 495 KYTEKKLEMEKLLLENDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQ-EKIHALTSENSNLK 573
Cdd:PRK03918 519 ELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 574 KMMsNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNL-ENTQNQIKAEYISLAEHEAK 652
Cdd:PRK03918 599 PFY-NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYsEEEYEELREEYLELSRELAG 677
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1622953786 653 MSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIK 703
Cdd:PRK03918 678 LRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELRE 728
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
762-1135 |
4.72e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.64 E-value: 4.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 762 QKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEAL 841
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 842 KKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEE 921
Cdd:COG1196 301 EQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 922 VSKLQSEVQNTKQALKKLETREvvdlskykatkSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAkdekellhf 1001
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQL-----------EELEEAEEALLERLERLEEELEELEEALAELEEEEEEE--------- 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1002 siEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTytsgnpTKRQSQLIDTLQ 1081
Cdd:COG1196 441 --EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE------ADYEGFLEGVKA 512
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1622953786 1082 HQVKSLEQQLADADRQHQEVIAIYRTHLLSAAQGHMDEDVQEALLQIIQMRQGL 1135
Cdd:COG1196 513 ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL 566
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
648-999 |
5.37e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 5.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 648 EHEAKMSSLSQSMRKVQDSNAEILANYRK--GQEEIVTLHAEIKAQKKELDtiqecIKVKYAPIVSFEECERKFKATEKE 725
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNELERQLKSleRQAEKAERYKELKAELRELE-----LALLVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 726 LKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKN 805
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELES 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 806 VKEKLVEEnakqtseilavqnllqkqhvpLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSsv 885
Cdd:TIGR02168 331 KLDELAEE---------------------LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSK-- 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 886 pLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNtkQALKKLETRevvdLSKYKATKSDLETQISSLN 965
Cdd:TIGR02168 388 -VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAE----LEELEEELEELQEELERLE 460
|
330 340 350
....*....|....*....|....*....|....
gi 1622953786 966 EKLANLNRKYEEVCEEVLHAKKKEISAKDEKELL 999
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
201-1049 |
9.93e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.61 E-value: 9.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 201 ECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTH------FLALKEHLTSEAASGNHRLTEELKDQLKDMKAKY 274
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRErekaerYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 275 EGASAEVGKLRNQIKQNEMIVEEF--------KRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLA- 345
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIeqlleelnKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAk 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 346 LSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAqhIKLEEHEQVKSRLEQKSGELGKK 425
Cdd:TIGR02169 327 LEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFA--ETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 426 ITELTLKNQTLQK---EIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLE 502
Cdd:TIGR02169 405 KRELDRLQEELQRlseELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 503 MEKLLLENDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKC--------------------GEDQEKI 562
Cdd:TIGR02169 485 LSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYataievaagnrlnnvvveddAVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 563 HALTSENSN------LKKMMSNEYVPVKTHEE--IKMTLNntlaktnkeLLDVKKKFEDInqefVKIKDKNEILKRNLEN 634
Cdd:TIGR02169 565 ELLKRRKAGratflpLNKMRDERRDLSILSEDgvIGFAVD---------LVEFDPKYEPA----FKYVFGDTLVVEDIEA 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 635 TQNQ-IKAEYISLaehEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIkvkyapivsfe 713
Cdd:TIGR02169 632 ARRLmGKYRMVTL---EGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL----------- 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 714 eceRKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRdktvliekshEMERALSRKTDELNKQL 793
Cdd:TIGR02169 698 ---RRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS----------SLEQEIENVKSELKELE 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 794 KDLSQKYAEIKNVKEKLVEENAKQT-SEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMqrcyEKEQQTVTK 872
Cdd:TIGR02169 765 ARIEELEEDLHKLEEALNDLEARLShSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYL----EKEIQELQE 840
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 873 LHQLLENQKNSSVPLAEHLQI-KEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLET---REVVDLS 948
Cdd:TIGR02169 841 QRIDLKEQIKSIEKEIENLNGkKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAqieKKRKRLS 920
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 949 KYKATKSDLETQISSLNEKLANLNRKYEEV-CEEVLHAKKKEISAKDEK-ELLHFSIEQEIKDQKERCDKslttITELQR 1026
Cdd:TIGR02169 921 ELKAKLEALEEELSEIEDPKGEDEEIPEEElSLEDVQAELQRVEEEIRAlEPVNMLAIQEYEEVLKRLDE----LKEKRA 996
|
890 900
....*....|....*....|...
gi 1622953786 1027 RIQESAKQIEAKDNKITELLNDV 1049
Cdd:TIGR02169 997 KLEEERKAILERIEEYEKKKREV 1019
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
717-974 |
1.01e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 1.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 717 RKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDktvLIEKSHEMERALSRKTDELNKQLKDL 796
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE---LLAELARLEQDIARLEERRRELEERL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 797 SQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQL 876
Cdd:COG1196 319 EELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAEL 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 877 LENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSD 956
Cdd:COG1196 399 AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
250
....*....|....*...
gi 1622953786 957 LETQISSLNEKLANLNRK 974
Cdd:COG1196 479 LAELLEELAEAAARLLLL 496
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
159-978 |
2.61e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 2.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 159 ENEILKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKD----VQKRMYESEGKV 234
Cdd:TIGR02169 224 EGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEeqlrVKEKIGELEAEI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 235 KQMQthflalkehltseaasgnhRLTEELKDQLKDMKAKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQK 314
Cdd:TIGR02169 304 ASLE-------------------RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 315 ElsmcemeREKKGRKVKEMEGQAKELLAKLAlsipaeKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELEN 394
Cdd:TIGR02169 365 E-------LEDLRAELEEVDKEFAETRDELK------DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAG 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 395 VKAKLAQHI--------KLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHyv 466
Cdd:TIGR02169 432 IEAKINELEeekedkalEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGG-- 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 467 plKVSEDMKKSHDAIIDDLNRKVLDVTQKYTeKKLE------MEKLLLENDSLSKD-----------------VNRLETV 523
Cdd:TIGR02169 510 --RAVEEVLKASIQGVHGTVAQLGSVGERYA-TAIEvaagnrLNNVVVEDDAVAKEaiellkrrkagratflpLNKMRDE 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 524 FVPPEK-HEKEVTALKSSIVELKKQLSELKKKCGEDqekihALTSENSNLKKMMSNEYVPVKTHEEI--KMTLNNTLAKT 600
Cdd:TIGR02169 587 RRDLSIlSEDGVIGFAVDLVEFDPKYEPAFKYVFGD-----TLVVEDIEAARRLMGKYRMVTLEGELfeKSGAMTGGSRA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 601 NKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEyisLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEE 680
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENR---LDELSQELSDASRKIGEIEKEIEQLEQEEEKLKER 738
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 681 IVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLseqtqkysvSEEEVKKNKQENDRLKKEIFT 760
Cdd:TIGR02169 739 LEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARL---------SHSRIPEIQAELSKLEEEVSR 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 761 LQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEilavqnlLQKQHVPLEQVEA 840
Cdd:TIGR02169 810 IEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE-------LEELEAALRDLES 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 841 LKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSsvplaehlqiKEAFEKEVGIIKASLREKEEESQNKME 920
Cdd:TIGR02169 883 RLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAK----------LEALEEELSEIEDPKGEDEEIPEEELS 952
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953786 921 EvSKLQSEVQNTKQALKKLET----------REVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEV 978
Cdd:TIGR02169 953 L-EDVQAELQRVEEEIRALEPvnmlaiqeyeEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
353-595 |
4.47e-07 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 54.16 E-value: 4.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 353 FENMKSSLSNEVNEKAKKLVEMEREHeksLSEIRQLkRELENVKAKLAQHIKLEEHEQVKSRLEQKSGELGKKITELTLK 432
Cdd:PRK05771 33 IEDLKEELSNERLRKLRSLLTKLSEA---LDKLRSY-LPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 433 NQTLQKEIEKvYLDNKLLKEQAHNLTIEMKNHY-------VPLKVSEDMKKSHDAIIDDLNRKVLDVTQKY------TEK 499
Cdd:PRK05771 109 ISELENEIKE-LEQEIERLEPWGNFDLDLSLLLgfkyvsvFVGTVPEDKLEELKLESDVENVEYISTDKGYvyvvvvVLK 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 500 KL--EMEKLLLENDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMS 577
Cdd:PRK05771 188 ELsdEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALS 267
|
250 260
....*....|....*....|....*....
gi 1622953786 578 NE-----------YVPVKTHEEIKMTLNN 595
Cdd:PRK05771 268 KFlktdktfaiegWVPEDRVKKLKELIDK 296
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
500-1091 |
8.06e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.58 E-value: 8.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 500 KLEMEKLLLENDSLSKDVNRleTVFVPPEKHEKEVTALKSSIVELKKQLSELK-------------KKCGED-----QEK 561
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQR--RLNESNELHEKQKFYLRQSVIDLQTKLQEMQmerdamadirrreSQSQEDlrnqlQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 562 IHALTSENSNLKKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDV-----KKKFEDINQEFVKIKDKNEILKRNLENTQ 636
Cdd:pfam15921 151 VHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFeeasgKKIYEHDSMSTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 637 NQI---KAEYISLAEHEAKMSSLSQS-----MRKVQDSNAEILANYrkgQEEIVTLHAEIKAQKKELDTIQ---ECIKVK 705
Cdd:pfam15921 231 TEIsylKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEH---EVEITGLTEKASSARSQANSIQsqlEIIQEQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 706 YAPIVSFEECE-RKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQendrLKKEIFTLQKDLRDKtvLIEKSHEMERALSR 784
Cdd:pfam15921 308 ARNQNSMYMRQlSDLESTVSQLRSELREAKRMYEDKIEELEKQLV----LANSELTEARTERDQ--FSQESGNLDDQLQK 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 785 KTDELNKQLKDLSQKyaeiKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQRCYE 864
Cdd:pfam15921 382 LLADLHKREKELSLE----KEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 865 KEQQTVTKLHQLLENQKNSSVPLAEHLQIK----EAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLE 940
Cdd:pfam15921 458 ESLEKVSSLTAQLESTKEMLRKVVEELTAKkmtlESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLK 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 941 TREvVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQ---EIKDQKERCDKS 1017
Cdd:pfam15921 538 NEG-DHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDrrlELQEFKILKDKK 616
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1018 LTTITELQRRIQ----ESAKQIEAKDNKI----------TELLNDVERLKQALNGLSQ----LTYTSGNPTKRQSQLIDT 1079
Cdd:pfam15921 617 DAKIRELEARVSdlelEKVKLVNAGSERLravkdikqerDQLLNEVKTSRNELNSLSEdyevLKRNFRNKSEEMETTTNK 696
|
650
....*....|..
gi 1622953786 1080 LQHQVKSLEQQL 1091
Cdd:pfam15921 697 LKMQLKSAQSEL 708
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
206-932 |
1.22e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.81 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 206 KEDSDEQIKQLEDALKDVQKRMYES------------------EGKVKQMQTHFLALKEHLTSEAASgnhrlTEELKDQL 267
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESnelhekqkfylrqsvidlQTKLQEMQMERDAMADIRRRESQS-----QEDLRNQL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 268 KDMKAKYEGASAevgKLRNQIKQNEMIVEEFKRdegKLIEENKRLQKELSMCEMEREKKGRKVKEMEgqakellaklalS 347
Cdd:pfam15921 148 QNTVHELEAAKC---LKEDMLEDSNTQIEQLRK---MMLSHEGVLQEIRSILVDFEEASGKKIYEHD------------S 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 348 IPAEKFENMKSSLSnevnekaKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHIKLeEHEQVKSRLEQKSGELGKKIT 427
Cdd:pfam15921 210 MSTMHFRSLGSAIS-------KILRELDTEISYLKGRIFPVEDQLEALKSESQNKIEL-LLQQHQDRIEQLISEHEVEIT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 428 ELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVS--------EDMKKSHDAIIDDLNRKVLDVTQKYTEK 499
Cdd:pfam15921 282 GLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTvsqlrselREAKRMYEDKIEELEKQLVLANSELTEA 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 500 KLEMEKLLLENDSLSkdvNRLETVFVPPEKHEKEVTALKS--------------SIVELKKQLSE--------------L 551
Cdd:pfam15921 362 RTERDQFSQESGNLD---DQLQKLLADLHKREKELSLEKEqnkrlwdrdtgnsiTIDHLRRELDDrnmevqrleallkaM 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 552 KKKC-GEDQEKIHALTSENSNLKK-------MMSNEYVPVKTHEEI---KMTLNN---TLAKTNKELLDVKKKFEDINQE 617
Cdd:pfam15921 439 KSECqGQMERQMAAIQGKNESLEKvssltaqLESTKEMLRKVVEELtakKMTLESserTVSDLTASLQEKERAIEATNAE 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 618 FVKIKDKNEI-------LKR---NLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAE 687
Cdd:pfam15921 519 ITKLRSRVDLklqelqhLKNegdHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKE 598
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 688 IKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKysvseeeVKKNKQENDRLKKEIFTLQKDLRD 767
Cdd:pfam15921 599 INDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRA-------VKDIKQERDQLLNEVKTSRNELNS 671
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 768 KTVLIE--------KSHEMERAlsrkTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHvplEQVE 839
Cdd:pfam15921 672 LSEDYEvlkrnfrnKSEEMETT----TNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKR---GQID 744
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 840 ALKKSlngtIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEK---------EVGIIKASLRE 910
Cdd:pfam15921 745 ALQSK----IQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERrlkekvanmEVALDKASLQF 820
|
810 820
....*....|....*....|..
gi 1622953786 911 KEEESQNKMEEVSKLQSEVQNT 932
Cdd:pfam15921 821 AECQDIIQRQEQESVRLKLQHT 842
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
593-1092 |
1.24e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.02 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 593 LNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILA 672
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 673 NYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQEND 752
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 753 RLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKqh 832
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL-- 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 833 vpLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHqLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASL---- 908
Cdd:COG1196 475 --LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL-LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAlqni 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 909 ---------REKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVD-------------------LSKYKATKSDLETQ 960
Cdd:COG1196 552 vveddevaaAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGaavdlvasdlreadaryyvLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 961 ISSLNEKLANLNRKYEEV---CEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEA 1037
Cdd:COG1196 632 LEAALRRAVTLAGRLREVtleGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE 711
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 1038 KDNKITELLNDVERLKQALNGLSQ-----------LTYTSGNPTKRQSQLIDTLQHQVKSLEQQLA 1092
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAEREelleelleeeeLLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
351-1097 |
1.50e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.81 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 351 EKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQlkrELENVKAKLaQHIKLEEHEQVKSRLEQKSgelgkkiTELT 430
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQ---SVIDLQTKL-QEMQMERDAMADIRRRESQ-------SQED 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 431 LKNQtLQKEIEKVYLdNKLLKEQAhnltieMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKklemeklLLEN 510
Cdd:pfam15921 143 LRNQ-LQNTVHELEA-AKCLKEDM------LEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKK-------IYEH 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 511 DSLSKDVNRletvfvppekheKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMsneyvpVKTHEEik 590
Cdd:pfam15921 208 DSMSTMHFR------------SLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELL------LQQHQD-- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 591 mTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKrnlENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEI 670
Cdd:pfam15921 268 -RIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQ---EQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDK 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 671 LANYRKgqeEIVTLHAEIKAQKKELDtiqecikvkyapivsfeecerKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQE 750
Cdd:pfam15921 344 IEELEK---QLVLANSELTEARTERD---------------------QFSQESGNLDDQLQKLLADLHKREKELSLEKEQ 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 751 NDRL-------KKEIFTLQKDLRDKTVLIEKsheMERALSRKTDELNKQLKdlsQKYAEIKNVKEKLvEENAKQTSEILA 823
Cdd:pfam15921 400 NKRLwdrdtgnSITIDHLRRELDDRNMEVQR---LEALLKAMKSECQGQME---RQMAAIQGKNESL-EKVSSLTAQLES 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 824 VQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLH-------QLLENQKNSSVPL------AEH 890
Cdd:pfam15921 473 TKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRsrvdlklQELQHLKNEGDHLrnvqteCEA 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 891 LQIKEAFEKEVGIIkasLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLAN 970
Cdd:pfam15921 553 LKLQMAEKDKVIEI---LRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 971 LNRKyeevceevlhaKKKEISAKDEKELLHFSIEQE---IKDQKERCDKSLTTITE----LQRRIQESAKQIEAKDNKIT 1043
Cdd:pfam15921 630 LELE-----------KVKLVNAGSERLRAVKDIKQErdqLLNEVKTSRNELNSLSEdyevLKRNFRNKSEEMETTTNKLK 698
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622953786 1044 ELLNDVE-RLKQALNGLSQLTYTSGNPTK----RQSQL------IDTLQHQVKSLEQQLADADRQ 1097
Cdd:pfam15921 699 MQLKSAQsELEQTRNTLKSMEGSDGHAMKvamgMQKQItakrgqIDALQSKIQFLEEAMTNANKE 763
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
640-1054 |
2.26e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.07 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 640 KAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEEcERKF 719
Cdd:PTZ00121 1231 KAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD-EAKK 1309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 720 KATEKELKDQLSEQTQKYSVSEEEVKKNKQENdrlKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQK 799
Cdd:PTZ00121 1310 KAEEAKKADEAKKKAEEAKKKADAAKKKAEEA---KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK 1386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 800 YAEIKNVKE--KLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSlngtiENLKEELKNMQRCYEKEQQTVTKLHQLL 877
Cdd:PTZ00121 1387 AEEKKKADEakKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKA-----DEAKKKAEEAKKADEAKKKAEEAKKAEE 1461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 878 ENQKNSSVPLAEHLQIKEAFEKEVgiikASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDL 957
Cdd:PTZ00121 1462 AKKKAEEAKKADEAKKKAEEAKKA----DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD 1537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 958 ETQISSLNEKLANLnRKYEEV--CEEVLHAKKKEiSAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQI 1035
Cdd:PTZ00121 1538 EAKKAEEKKKADEL-KKAEELkkAEEKKKAEEAK-KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKA 1615
|
410
....*....|....*....
gi 1622953786 1036 EAKDNKITELLNDVERLKQ 1054
Cdd:PTZ00121 1616 EEAKIKAEELKKAEEEKKK 1634
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
532-1109 |
2.45e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 51.65 E-value: 2.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 532 KEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKkmMSNEYVPVKTHEEIKmtlnntlakTNKELLDVKKKF 611
Cdd:pfam05483 85 KEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQ--FENEKVSLKLEEEIQ---------ENKDLIKENNAT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 612 EDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRkVQDSNAEILANYRKGQEEIVTLHAEiKAQ 691
Cdd:pfam05483 154 RHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELR-VQAENARLEMHFKLKEDHEKIQHLE-EEY 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 692 KKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEI----FTLQKDLRD 767
Cdd:pfam05483 232 KKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELedikMSLQRSMST 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 768 KTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNG 847
Cdd:pfam05483 312 QKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSS 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 848 TIENLKEeLKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKE--------AFEKEVGIIKASLREKEEESQNKM 919
Cdd:pfam05483 392 ELEEMTK-FKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEqelifllqAREKEIHDLEIQLTAIKTSEEHYL 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 920 EEVSKLQSEVQNTKQALKKLETRE---VVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEK 996
Cdd:pfam05483 471 KEVEDLKTELEKEKLKNIELTAHCdklLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDEL 550
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 997 ELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQL 1076
Cdd:pfam05483 551 ESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQ 630
|
570 580 590
....*....|....*....|....*....|...
gi 1622953786 1077 IDTLQHQVKSLEQQLADADRQHQEVIAIYRTHL 1109
Cdd:pfam05483 631 LNAYEIKVNKLELELASAKQKFEEIIDNYQKEI 663
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
534-768 |
3.05e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 534 VTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSN-EYVPVKTHEEIKmTLNNTLAKTNKELLDVKKKFE 612
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAAlERRIAALARRIR-ALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 613 DINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQK 692
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 693 KELDTIQEcikvkyapivSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDK 768
Cdd:COG4942 174 AELEALLA----------ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
384-941 |
3.35e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 51.44 E-value: 3.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 384 EIRQLKRELENVKAKLAQHIKleEHEQVKSRLEQKSGELGKKITELTLKNQTLQK----EIEKVYLDNKLLKEQAHNLTI 459
Cdd:PRK01156 191 KLKSSNLELENIKKQIADDEK--SHSITLKEIERLSIEYNNAMDDYNNLKSALNElsslEDMKNRYESEIKTAESDLSME 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 460 EMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKyteKKLEMEKLLLENdsLSKDVNRLETVFVPPEKHEK---EVTA 536
Cdd:PRK01156 269 LEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYK---NDIENKKQILSN--IDAEINKYHAIIKKLSVLQKdynDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 537 LKSSIVELKKQLSELKkkcgEDQEKIHALTSENSNLKKMMSNEYVPVK-THEEIKMTL----------NNTLAKTNKELL 605
Cdd:PRK01156 344 KKSRYDDLNNQILELE----GYEMDYNSYLKSIESLKKKIEEYSKNIErMSAFISEILkiqeidpdaiKKELNEINVKLQ 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 606 DVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLsqsMRKVQDSNAEILANYRKGQEEIVTLH 685
Cdd:PRK01156 420 DISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHI---INHYNEKKSRLEEKIREIEIEVKDID 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 686 AEIKAQKKELDTIQEcikvkyAPIVSFEECERKFKATEKELKD------QLSEQTQKYSVSEEEVKKNKQENDRLKKEIF 759
Cdd:PRK01156 497 EKIVDLKKRKEYLES------EEINKSINEYNKIESARADLEDikikinELKDKHDKYEEIKNRYKSLKLEDLDSKRTSW 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 760 TLQKDLRDkTVLIEkshemerALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVE 839
Cdd:PRK01156 571 LNALAVIS-LIDIE-------TNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENK 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 840 ALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSsvplaehlqikeafEKEVGIIKASLREKEEESQNKM 919
Cdd:PRK01156 643 ILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKS--------------RKALDDAKANRARLESTIEILR 708
|
570 580
....*....|....*....|..
gi 1622953786 920 EEVSKLQSEVQNTKQALKKLET 941
Cdd:PRK01156 709 TRINELSDRINDINETLESMKK 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
609-823 |
5.82e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 5.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 609 KKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEI 688
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 689 KAQKKE----LDTIQECIKVKYAPIV----SFEECERK---FKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKE 757
Cdd:COG4942 100 EAQKEElaelLRALYRLGRQPPLALLlspeDFLDAVRRlqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 758 IFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILA 823
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
626-1054 |
6.25e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 626 EILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVK 705
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 706 YAPIVSF-EECERKFKATE------KELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEM 778
Cdd:PRK02224 334 RVAAQAHnEEAESLREDADdleeraEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDF 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 779 ERALSRKTDELNKQLKDLSqkyAEIKNVKEKLVE-----------------ENAKQTSEILAVQNLLQKQHVPLEQVEAL 841
Cdd:PRK02224 414 LEELREERDELREREAELE---ATLRTARERVEEaealleagkcpecgqpvEGSPHVETIEEDRERVEELEAELEDLEEE 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 842 KKSLNGTIENLkEELKNMQRCYEKEQQTVTKLHQLLENQKNS----SVPLAEHLQIKEAFEKEVGIIKASLREKEEESQN 917
Cdd:PRK02224 491 VEEVEERLERA-EDLVEAEDRIERLEERREDLEELIAERRETieekRERAEELRERAAELEAEAEEKREAAAEAEEEAEE 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 918 KMEEVSKLQSEVQNTKQALKKLETREVVDlskykATKSDLETQISSLNEKLANLNRKYEEVCEEVlhAKKKEISAKDEKE 997
Cdd:PRK02224 570 AREEVAELNSKLAELKERIESLERIRTLL-----AAIADAEDEIERLREKREALAELNDERRERL--AEKRERKRELEAE 642
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622953786 998 LLHFSIEqEIKDQKERCDKSLTTITELQRRIQES----AKQIEAKDNKITELLNDVERLKQ 1054
Cdd:PRK02224 643 FDEARIE-EAREDKERAEEYLEQVEEKLDELREErddlQAEIGAVENELEELEELRERREA 702
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
679-1089 |
1.56e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.25 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 679 EEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKY-------SVSEEEVKKNKQEN 751
Cdd:TIGR04523 40 KKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKInklnsdlSKINSEIKNDKEQK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 752 DRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQ 831
Cdd:TIGR04523 120 NKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 832 HVPLEQVEALK---KSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNssvplaEHLQIKEAFEKevgiIKASL 908
Cdd:TIGR04523 200 ELLLSNLKKKIqknKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT------QLNQLKDEQNK----IKKQL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 909 REKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKY--------KATKSDLETQISSLNEKLANLNRKYEEVCE 980
Cdd:TIGR04523 270 SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKElkselknqEKKLEEIQNQISQNNKIISQLNEQISQLKK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 981 EVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSL---TTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALN 1057
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKnleSQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIE 429
|
410 420 430
....*....|....*....|....*....|..
gi 1622953786 1058 GLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQ 1089
Cdd:TIGR04523 430 RLKETIIKNNSEIKDLTNQDSVKELIIKNLDN 461
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
210-521 |
1.67e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.16 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 210 DEQIKQLE-DALKDVQKRMYESEGKVKQMQTHFLALKEhLTSEAASGNHRLtEELKDQLKDMKAKYEGASAEVGKLRNQI 288
Cdd:COG1196 199 ERQLEPLErQAEKAERYRELKEELKELEAELLLLKLRE-LEAELEELEAEL-EELEAELEELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 289 KQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLALsipaekfenmkssLSNEVNEKA 368
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE-------------LEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 369 KKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHIK-LEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDN 447
Cdd:COG1196 344 EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEeLEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622953786 448 KLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLE 521
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
211-409 |
2.09e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 2.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 211 EQIKQLEDALKDvqkrmYESEGKVKQMQTHFLALKEHLTSEAAsgnHRLTEELKDQLKDMKAKYEGASAEVGKLRNQIKQ 290
Cdd:COG4913 249 EQIELLEPIREL-----AERYAAARERLAELEYLRAALRLWFA---QRRLELLEAELEELRAELARLEAELERLEARLDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 291 NEMIVEEFKR----DEGKLIEenkRLQKELSMCEMEREKKGRKVKemegQAKELLAKLALSIP----------------A 350
Cdd:COG4913 321 LREELDELEAqirgNGGDRLE---QLEREIERLERELEERERRRA----RLEALLAALGLPLPasaeefaalraeaaalL 393
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 351 EKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKR-------ELENVKAKLAQHIKLEEHE 409
Cdd:COG4913 394 EALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERrksnipaRLLALRDALAEALGLDEAE 459
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
139-640 |
2.78e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.48 E-value: 2.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 139 QSRSMLRPLELSLPSQTSYSE-NEILKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQLE 217
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQkNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLS 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 218 DALKDVQKrmyeSEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDMKAKYEgasaevgKLRNQIKQNEMIVEE 297
Cdd:TIGR04523 271 EKQKELEQ----NNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLE-------EIQNQISQNNKIISQ 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 298 FKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLalsipaEKFENMKSSLSNEVNEKAKKLVEMERE 377
Cdd:TIGR04523 340 LNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEI------KNLESQINDLESKIQNQEKLNQQKDEQ 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 378 HEKSLSEIRQLKRELENVKAklaqhiKLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNL 457
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKE------TIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 458 TIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLETVfVPPEKHEKEVTAL 537
Cdd:TIGR04523 488 QKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFE-LKKENLEKEIDEK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 538 KSSIVELKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVpvktheeikmtlnnTLAKTNKELLDVKKKFEDINQE 617
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEK--------------KISSLEKELEKAKKENEKLSSI 632
|
490 500
....*....|....*....|...
gi 1622953786 618 FVKIKDKNEILKRNLENTQNQIK 640
Cdd:TIGR04523 633 IKNIKSKKNKLKQEVKQIKETIK 655
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
740-974 |
6.67e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 6.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 740 SEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTS 819
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 820 EILAVQNLLQKQHV---PLEQVEALKKSLNGtiENLKEELKNMQRcyekeqqtvtkLHQLLENQKNSSVPLAEHLQIKEA 896
Cdd:COG4942 98 ELEAQKEELAELLRalyRLGRQPPLALLLSP--EDFLDAVRRLQY-----------LKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953786 897 FEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRK 974
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
357-759 |
9.07e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 9.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 357 KSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQ-HIKLEEHEQVKSRLEQKSGELGKKITELTLKNQT 435
Cdd:TIGR02169 697 LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEElEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 436 LQKEIEKVYldNKLLKEQAHNLTIEMKNhyvplkvSEDMKKSHDAIIDDLNRKvldvtqkytEKKLEMEKLLLEndslsk 515
Cdd:TIGR02169 777 LEEALNDLE--ARLSHSRIPEIQAELSK-------LEEEVSRIEARLREIEQK---------LNRLTLEKEYLE------ 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 516 dvnrletvfvppekheKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSEnsnlkkmmsneyvpvktheeikmtlnn 595
Cdd:TIGR02169 833 ----------------KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE--------------------------- 869
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 596 tLAKTNKELLDVKKKFEDINQEFVKIKDKneilKRNLENTQNQIKAEYISLAEHeakMSSLSQSMRKVQDSNAEILANYR 675
Cdd:TIGR02169 870 -LEELEAALRDLESRLGDLKKERDELEAQ----LRELERKIEELEAQIEKKRKR---LSELKAKLEALEEELSEIEDPKG 941
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 676 KGqEEIVTLHAEIKAQKKELDTIQECIK----VKYAPIVSFEECERKFkatekelkDQLSEQTQKYSVSEEEVKKNKQEN 751
Cdd:TIGR02169 942 ED-EEIPEEELSLEDVQAELQRVEEEIRalepVNMLAIQEYEEVLKRL--------DELKEKRAKLEEERKAILERIEEY 1012
|
....*...
gi 1622953786 752 DRLKKEIF 759
Cdd:TIGR02169 1013 EKKKREVF 1020
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
689-1024 |
1.05e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.61 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 689 KAQKKELDTIQECIKVKYAPIVsfEECERKFKatekELKDQLSEQTQKYSVSEEEVK-----KNKQENDRLKKEIFTLQK 763
Cdd:COG5022 856 KAKKRFSLLKKETIYLQSAQRV--ELAERQLQ----ELKIDVKSISSLKLVNLELESeiielKKSLSSDLIENLEFKTEL 929
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 764 DLRDKTVL----IEKSHEMERALSRKTDEL---NKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLE 836
Cdd:COG5022 930 IARLKKLLnnidLEEGPSIEYVKLPELNKLhevESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYG 1009
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 837 QVEALKKSLngtiENLKEELKNMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQ 916
Cdd:COG5022 1010 ALQESTKQL----KELPVEVAELQSASKIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQ 1085
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 917 nkMEEVSKLQSEVQNTKQALKKLET---REVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAK 993
Cdd:COG5022 1086 --LESTENLLKTINVKDLEVTNRNLvkpANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEA 1163
|
330 340 350
....*....|....*....|....*....|.
gi 1622953786 994 DEKELLHFSIEQEIKDQKERCDKSLTTITEL 1024
Cdd:COG5022 1164 NLEALPSPPPFAALSEKRLYQSALYDEKSKL 1194
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
210-387 |
1.30e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 210 DEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDMKAKYEGASAEVGKLRNQIK 289
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLE 695
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 290 QNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAK-----ELLAKLALSIPAEKFENMKSSLSNEV 364
Cdd:COG4913 696 ELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlelraLLEERFAAALGDAVERELRENLEERI 775
|
170 180
....*....|....*....|...
gi 1622953786 365 NEKAKKLVEMEREHEKSLSEIRQ 387
Cdd:COG4913 776 DALRARLNRAEEELERAMRAFNR 798
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
261-1111 |
1.48e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 261 EELKDQLKDMKAKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRL----QKELSMCEMEREKKGRKVKEMEGQ 336
Cdd:TIGR00606 244 ENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVfqgtDEQLNDLYHNHQRTVREKERELVD 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 337 AKELLAKLalSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHIKLE---EHEQVKS 413
Cdd:TIGR00606 324 CQRELEKL--NKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQiknFHTLVIE 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 414 RLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKVLDVT 493
Cdd:TIGR00606 402 RQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELR 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 494 QKYTEKKLEMEKLLLENDSLS-KDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSNL 572
Cdd:TIGR00606 482 KAERELSKAEKNSLTETLKKEvKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDE 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 573 KKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIkAEYISLAEHEAK 652
Cdd:TIGR00606 562 LTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKL-FDVCGSQDEESD 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 653 MSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSE 732
Cdd:TIGR00606 641 LERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKK 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 733 QTQKYSVSEEEVKKNKQENDRLKKEIftlqKDLRdktvliEKSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVE 812
Cdd:TIGR00606 721 KEKRRDEMLGLAPGRQSIIDLKEKEI----PELR------NKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTD 790
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 813 -----------ENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLHQLLENQK 881
Cdd:TIGR00606 791 vtimerfqmelKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELK 870
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 882 NSSVPLAEHLQIKEAFEKEvgiikasLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQI 961
Cdd:TIGR00606 871 SEKLQIGTNLQRRQQFEEQ-------LVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKV 943
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 962 SSLNEKLAN-------LNRKYEEVCEEVLHAKKKEISA-------------KDEKELLHFSIEQEIKDQKERCDKSLTTI 1021
Cdd:TIGR00606 944 NDIKEKVKNihgymkdIENKIQDGKDDYLKQKETELNTvnaqleecekhqeKINEDMRLMRQDIDTQKIQERWLQDNLTL 1023
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1022 TELQRRIQESAKQIEAKDNKITELlnDVERLKQALNGLSQLTYTSGNPTK----RQSQLIDTLQHQVKSL-EQQLADADR 1096
Cdd:TIGR00606 1024 RKRENELKEVEEELKQHLKEMGQM--QVLQMKQEHQKLEENIDLIKRNHVlalgRQKGYEKEIKHFKKELrEPQFRDAEE 1101
|
890
....*....|....*
gi 1622953786 1097 QHQEVIAIYRTHLLS 1111
Cdd:TIGR00606 1102 KYREMMIVMRTTELV 1116
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
323-1095 |
1.51e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 323 REKKGRKVKEMEGQAKELLAKLALSipAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQH 402
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNES--NELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 403 I-KLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLD-----NKLLKEQAHNLTIEMKNHYVPLkvsEDMKK 476
Cdd:pfam15921 151 VhELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDfeeasGKKIYEHDSMSTMHFRSLGSAI---SKILR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 477 SHDAIIDDLNRKVLDVTQKYTEKKLEME---KLLLENDSlskdvNRLETVFvppEKHEKEVTALKSSIVELKKQLSELKK 553
Cdd:pfam15921 228 ELDTEISYLKGRIFPVEDQLEALKSESQnkiELLLQQHQ-----DRIEQLI---SEHEVEITGLTEKASSARSQANSIQS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 554 KCGEDQEKIHaltSENSNLKKMMSNeyvpvktheeikmtLNNTLAKTNKELLDVKKKFEDinqefvkikdkneilkrNLE 633
Cdd:pfam15921 300 QLEIIQEQAR---NQNSMYMRQLSD--------------LESTVSQLRSELREAKRMYED-----------------KIE 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 634 NTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEivtLHAEIKAQKKELD-------TIQECIKVKY 706
Cdd:pfam15921 346 ELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKE---LSLEKEQNKRLWDrdtgnsiTIDHLRRELD 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 707 APIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKT 786
Cdd:pfam15921 423 DRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLT 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 787 DELNKQLKDLSQKYAEIKNVKEKlVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQRCYEKE 866
Cdd:pfam15921 503 ASLQEKERAIEATNAEITKLRSR-VDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQH 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 867 QQTVTKLH----QLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLetr 942
Cdd:pfam15921 582 GRTAGAMQvekaQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQL--- 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 943 evvdLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKEllhfSIEQEIKDQKERCDKSLTTIT 1022
Cdd:pfam15921 659 ----LNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE----QTRNTLKSMEGSDGHAMKVAM 730
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1023 ELQRRIQESAKQIEAKDNKI-------TELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADAD 1095
Cdd:pfam15921 731 GMQKQITAKRGQIDALQSKIqfleeamTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME 810
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
261-443 |
1.80e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 261 EELKDQLKDMKAKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKEL 340
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 341 LAK---------LALSIPAEKFENMKSSLS-------------NEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAK 398
Cdd:COG4942 110 LRAlyrlgrqppLALLLSPEDFLDAVRRLQylkylaparreqaEELRADLAELAALRAELEAERAELEALLAELEEERAA 189
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1622953786 399 LAQHIKleEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKV 443
Cdd:COG4942 190 LEALKA--ERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
752-1004 |
1.87e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.69 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 752 DRLKKEIFT-LQK----DLRDKTVLIE-KSHEMERALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEenaKQTSEILAVQ 825
Cdd:PRK05771 15 KSYKDEVLEaLHElgvvHIEDLKEELSnERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSV---KSLEELIKDV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 826 NLLqkqhvpLEQVEALKKSLNGTIENLKEELKNmqrcYEKEQQTVTKLH------QLLENQKNSSVPLAEhlqIKEAFEK 899
Cdd:PRK05771 92 EEE------LEKIEKEIKELEEEISELENEIKE----LEQEIERLEPWGnfdldlSLLLGFKYVSVFVGT---VPEDKLE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 900 EVGIIKaSLREKEEESQNKMEE-----VSKLQSEVQNTkqALKKLETREVV---------DLSKYKATKSDLETQISSLN 965
Cdd:PRK05771 159 ELKLES-DVENVEYISTDKGYVyvvvvVLKELSDEVEE--ELKKLGFERLEleeegtpseLIREIKEELEEIEKERESLL 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1622953786 966 EKLANLNRKYEE---VCEEVL--HAKKKEISAKDEKELLHFSIE 1004
Cdd:PRK05771 236 EELKELAKKYLEellALYEYLeiELERAEALSKFLKTDKTFAIE 279
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
724-1102 |
2.20e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.66 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 724 KELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYAEI 803
Cdd:PRK01156 172 KDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMK 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 804 KNVKEKLVEENAKQTSEILAVQNL--LQKQHVPLEQVEALKK--------SLNGTIENLKEELKNMQRCYEKEQQTVTKL 873
Cdd:PRK01156 252 NRYESEIKTAESDLSMELEKNNYYkeLEERHMKIINDPVYKNrnyindyfKYKNDIENKKQILSNIDAEINKYHAIIKKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 874 HQL-------LENQKNSSVPLAEHLQIKEAFEKEVGIIKA--SLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREv 944
Cdd:PRK01156 332 SVLqkdyndyIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKE- 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 945 vdLSKYKATKSDLETQISSLNEKLANLNRKYEE---------------VCEEVLHAKKKEISAKD--------EKELLHF 1001
Cdd:PRK01156 411 --LNEINVKLQDISSKVSSLNQRIRALRENLDElsrnmemlngqsvcpVCGTTLGEEKSNHIINHynekksrlEEKIREI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1002 SIEQEIKDQKERCDKSLTTITELQ--RRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQL--------------TYT 1065
Cdd:PRK01156 489 EIEVKDIDEKIVDLKKRKEYLESEeiNKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIknrykslkledldsKRT 568
|
410 420 430
....*....|....*....|....*....|....*....
gi 1622953786 1066 SGNPTKRQSQLID--TLQHQVKSLEQQLADADRQHQEVI 1102
Cdd:PRK01156 569 SWLNALAVISLIDieTNRSRSNEIKKQLNDLESRLQEIE 607
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
904-1130 |
2.23e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 904 IKASLREKEEESQNKM----EEVSKLQSEVQNTKQALKKLETRE-VVDLSkykATKSDLETQISSLNEKLANLNRKYEEV 978
Cdd:COG3206 162 LEQNLELRREEARKALefleEQLPELRKELEEAEAALEEFRQKNgLVDLS---EEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 979 ceEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNG 1058
Cdd:COG3206 239 --EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILA 316
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 1059 LSQLTYTSGNPTKRQ-SQLIDTLQHQVKSL---EQQLADADRQHQEVIAIYRTHLLSAAQGHMDEDVQEALLQIIQ 1130
Cdd:COG3206 317 SLEAELEALQAREASlQAQLAQLEARLAELpelEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVRVID 392
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
780-996 |
2.91e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.44 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 780 RALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQnllqkqhvplEQVEALKKSLNGTIENLKEELKNM 859
Cdd:COG3883 26 SELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQ----------AEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 860 QRcyekEQQTVTKLHQLLENQKNSSVplaehlqikeafekevgIIKASLREKEEESQNK-MEEVSKLQSEVQNTKQALKK 938
Cdd:COG3883 96 YR----SGGSVSYLDVLLGSESFSDF-----------------LDRLSALSKIADADADlLEELKADKAELEAKKAELEA 154
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953786 939 LETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVcEEVLHAKKKEISAKDEK 996
Cdd:COG3883 155 KLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAA-EAQLAELEAELAAAEAA 211
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
203-418 |
3.42e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 203 ERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQthflalKEH----LTSEAASGNHRLTeELKDQLKDMKAKYEGAS 278
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALEEFR------QKNglvdLSEEAKLLLQQLS-ELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 279 AEVGKLRNQIKQNEMIVEEFKRDegkliEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLAlsipaekfeNMKS 358
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQS-----PVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIA---------ALRA 305
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 359 SLSNEVnekAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQhikLEEHEQVKSRLEQK 418
Cdd:COG3206 306 QLQQEA---QRILASLEAELEALQAREASLQAQLAQLEARLAE---LPELEAELRRLERE 359
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
482-1057 |
3.42e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.89 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 482 IDDLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVELKKQLSELKKKCGEDQEK 561
Cdd:PRK01156 140 MDSLISGDPAQRKKILDEILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKE 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 562 IHALTSENSNlkkmMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKA 641
Cdd:PRK01156 220 IERLSIEYNN----AMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRN 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 642 EYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKgQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKA 721
Cdd:PRK01156 296 YINDYFKYKNDIENKKQILSNIDAEINKYHAIIKK-LSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIES 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 722 TEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYA 801
Cdd:PRK01156 375 LKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSV 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 802 -----------EIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGtienlkeelKNMQRCYEKEQQTV 870
Cdd:PRK01156 455 cpvcgttlgeeKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLES---------EEINKSINEYNKIE 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 871 TKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVS-----KLQSEVQNTKQALKKLETREVV 945
Cdd:PRK01156 526 SARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISlidieTNRSRSNEIKKQLNDLESRLQE 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 946 DLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHfSIEQEIKDQKE---RCDKSLTTIT 1022
Cdd:PRK01156 606 IEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIA-EIDSIIPDLKEitsRINDIEDNLK 684
|
570 580 590
....*....|....*....|....*....|....*
gi 1622953786 1023 ELQRRIQESAKQIEAKDNKITELLNDVERLKQALN 1057
Cdd:PRK01156 685 KSRKALDDAKANRARLESTIEILRTRINELSDRIN 719
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
621-856 |
3.70e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.89 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 621 IKDKNEILKRNlENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQE 700
Cdd:PLN02939 155 LEDLEKILTEK-EALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKE 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 701 -------CIKVKYAPIVSFEECERKFKATEKE---LKDQLSEQTQKYSVSEEEVKK----------NKQEN--------- 751
Cdd:PLN02939 234 enmllkdDIQFLKAELIEVAETEERVFKLEKErslLDASLRELESKFIVAQEDVSKlsplqydcwwEKVENlqdlldrat 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 752 DRLKKEIFTLQK--DLRDKTVLIEKSHEmeralSRKTDELNKQLKDLSQKyaEIKNVKEKLVEENAKQTSEILAVQNLLQ 829
Cdd:PLN02939 314 NQVEKAALVLDQnqDLRDKVDKLEASLK-----EANVSKFSSYKVELLQQ--KLKLLEERLQASDHEIHSYIQLYQESIK 386
|
250 260
....*....|....*....|....*....
gi 1622953786 830 KQHVPLEQV--EALKKSLNGTIENLKEEL 856
Cdd:PLN02939 387 EFQDTLSKLkeESKKRSLEHPADDMPSEF 415
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
329-460 |
4.59e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.00 E-value: 4.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 329 KVKEMEGQAKELLA----------KLALSIPAEKFENMKSSLSNEVNEKAKKLVEMERehekslseirQLKRELENVKAK 398
Cdd:PRK12704 32 KIKEAEEEAKRILEeakkeaeaikKEALLEAKEEIHKLRNEFEKELRERRNELQKLEK----------RLLQKEENLDRK 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622953786 399 LAQHIKLEEH-EQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVyldNKLLKEQAHNLTIE 460
Cdd:PRK12704 102 LELLEKREEElEKKEKELEQKQQELEKKEEELEELIEEQLQELERI---SGLTAEEAKEILLE 161
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
532-993 |
5.42e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 44.30 E-value: 5.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 532 KEVTALKSSIVELKKQLSELKKKCGED-QEKIHALTSENSNLKKMMSNeyVPVKTHEEIKMTLNNTLAKtnkeLLDVKKK 610
Cdd:COG5022 892 KSISSLKLVNLELESEIIELKKSLSSDlIENLEFKTELIARLKKLLNN--IDLEEGPSIEYVKLPELNK----LHEVESK 965
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 611 FEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQS---MRKVQDSNAEILANYRKGQEEIVTLHAE 687
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQEStkqLKELPVEVAELQSASKIISSESTELSIL 1045
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 688 IKAQK-------KELDTIQECIKVKYAPIVSFEEC------------ERKFKATEKELKDQ-----------LSEQTQKY 737
Cdd:COG5022 1046 KPLQKlkgllllENNQLQARYKALKLRRENSLLDDkqlyqlestenlLKTINVKDLEVTNRnlvkpanvlqfIVAQMIKL 1125
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 738 SVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMER----ALSRKTDELNKQLKDLSQKY----AEIKNVKEK 809
Cdd:COG5022 1126 NLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALpsppPFAALSEKRLYQSALYDEKSklssSEVNDLKNE 1205
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 810 LVEENAKQTSEIL---AVQNLLQKQHVPLEQVEALKKSLNG----------TIENLKEELKNMQRCYEKEQQTVTKLHQL 876
Cdd:COG5022 1206 LIALFSKIFSGWPrgdKLKKLISEGWVPTEYSTSLKGFNNLnkkfdtpasmSNEKLLSLLNSIDNLLSSYKLEEEVLPAT 1285
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 877 LENQ-KNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREvVDLSKYKATKS 955
Cdd:COG5022 1286 INSLlQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFEISDVDEELEELIQAVKVLQLLK-DDLNKLDELLD 1364
|
490 500 510
....*....|....*....|....*....|....*...
gi 1622953786 956 DLETQissLNEKLANLNRKYEevCEEVLHAKKKEISAK 993
Cdd:COG5022 1365 ACYSL---NPAEIQNLKSRYD--PADKENNLPKEILKK 1397
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
932-1056 |
5.49e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 5.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 932 TKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLnRKYEEVCEEVLHAKKKEIsAKDEKELLHFSIEQEIKDQK 1011
Cdd:COG2433 386 IEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERL-EAEVEELEAELEEKDERI-ERLERELSEARSEERREIRK 463
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1622953786 1012 ERcdksltTITELQRRIQESAKQIEAKDNKITELLNDVERLKQAL 1056
Cdd:COG2433 464 DR------EISRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
717-1119 |
7.14e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 7.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 717 RKFKATEKELKdQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKSHEMER--ALSRKTDELNKQLK 794
Cdd:COG4717 71 KELKELEEELK-EAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQEleALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 795 DLSQKYAEIKNVKEKLveENAKQTSEILAVQNLLQKQHVPLEQVEALKkSLNGTIENLKEELKNMQRCYEKEQQTVTKLH 874
Cdd:COG4717 150 ELEERLEELRELEEEL--EELEAELAELQEELEELLEQLSLATEEELQ-DLAEELEELQQRLAELEEELEEAQEELEELE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 875 QLLENQKNSSVPLAEHLQIKEA-----------------------FEKEVGIIKAS----------LREKEEESQNKMEE 921
Cdd:COG4717 227 EELEQLENELEAAALEERLKEArlllliaaallallglggsllslILTIAGVLFLVlgllallfllLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 922 VSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEI----SAKDEKE 997
Cdd:COG4717 307 LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALlaeaGVEDEEE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 998 LLHF--------SIEQEIKDQKERCDKSLTTI---------TELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLs 1060
Cdd:COG4717 387 LRAAleqaeeyqELKEELEELEEQLEELLGELeellealdeEELEEELEELEEELEELEEELEELREELAELEAELEQL- 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622953786 1061 qltytsgnptkRQSQLIDTLQHQVKSLEQQLADADRQHQeVIAIYRTHLLSAAQGHMDE 1119
Cdd:COG4717 466 -----------EEDGELAELLQELEELKAELRELAEEWA-ALKLALELLEEAREEYREE 512
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
8-1068 |
7.82e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.89 E-value: 7.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 8 KSHQREHQNIQDLEIENEDLK------ERLRKIQQEQRILLDKVNGLQLQLNEEVMVAddlESEREKLKSLLAAKEKQHE 81
Cdd:TIGR01612 904 KSIEEEYQNINTLKKVDEYIKicentkESIEKFHNKQNILKEILNKNIDTIKESNLIE---KSYKDKFDNTLIDKINELD 980
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 82 E-----SLRTIEALKNRF-KYFESDHLGSGSHfsnrKEDMLLKQ------------GQMYMADSQCTSPGIPAHMQSRSM 143
Cdd:TIGR01612 981 KafkdaSLNDYEAKNNELiKYFNDLKANLGKN----KENMLYHQfdekekatndieQKIEDANKNIPNIEIAIHTSIYNI 1056
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 144 LRPLELSLPSQTSYSENEILKKELEAMRTFCESakQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDV 223
Cdd:TIGR01612 1057 IDEIEKEIGKNIELLNKEILEEAEINITNFNEI--KEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKAL 1134
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 224 QKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDMKAKYEGASAEVGKLRNQIKQNEMIVEEFKRDEG 303
Cdd:TIGR01612 1135 EEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKG 1214
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 304 KLIEENKRLQKE-LSMCEMEREKKGRKVKEMEGQAKEL--LAKLALSIPAEKFENMKSSLSNEV----NEKAKKLVEMER 376
Cdd:TIGR01612 1215 INLSYGKNLGKLfLEKIDEEKKKSEHMIKAMEAYIEDLdeIKEKSPEIENEMGIEMDIKAEMETfnisHDDDKDHHIISK 1294
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 377 EHEKSLSEIRQ--LKRELENVKAKLAQHIKLEEHEQVkSRLEQKSGELGKKITELT-----LKNQTLQKEIEKVYLDNKL 449
Cdd:TIGR01612 1295 KHDENISDIREksLKIIEDFSEESDINDIKKELQKNL-LDAQKHNSDINLYLNEIAniyniLKLNKIKKIIDEVKEYTKE 1373
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 450 LKEQAHNLTIEMKNHYVPLKVSED---MKKSHDAIIDDLNRKVLD-VTQKYTEKKLEMEKLLLENDSLSKDVNRL----- 520
Cdd:TIGR01612 1374 IEENNKNIKDELDKSEKLIKKIKDdinLEECKSKIESTLDDKDIDeCIKKIKELKNHILSEESNIDTYFKNADENnenvl 1453
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 521 -----------ETVFVPPEKHEKEVTALKSSIVELKKQLSElKKKCGEDQEKIHALTSENSNLKKMMSNEyVPVKTHEEI 589
Cdd:TIGR01612 1454 llfkniemadnKSQHILKIKKDNATNDHDFNINELKEHIDK-SKGCKDEADKNAKAIEKNKELFEQYKKD-VTELLNKYS 1531
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 590 KMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAE--------------YISLAEHEAKMSS 655
Cdd:TIGR01612 1532 ALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDaakndksnkaaidiQLSLENFENKFLK 1611
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 656 LSQSMRKVQDSNAEILANYRK-GQEEIVTLHAEIKAQKKELDTIQECIKvkyapivSFEECERKFKATEKELkDQLSEQT 734
Cdd:TIGR01612 1612 ISDIKKKINDCLKETESIEKKiSSFSIDSQDTELKENGDNLNSLQEFLE-------SLKDQKKNIEDKKKEL-DELDSEI 1683
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 735 QKYSVSEEEVKKNKQEN--DRLKKEIFTLQKDLRDKTVLIEKSheMERALS-------------RKTDELNKQLKDLSQK 799
Cdd:TIGR01612 1684 EKIEIDVDQHKKNYEIGiiEKIKEIAIANKEEIESIKELIEPT--IENLISsfntndlegidpnEKLEEYNTEIGDIYEE 1761
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 800 YAEIKNV---------KEKLVEENAKQT-----SEILAVQNLLQKQHVPLEQVEAlkKSLNGTIENLKEELKNMQRCYEK 865
Cdd:TIGR01612 1762 FIELYNIiagcletvsKEPITYDEIKNTrinaqNEFLKIIEIEKKSKSYLDDIEA--KEFDRIINHFKKKLDHVNDKFTK 1839
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 866 EQQTVTK----LHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQS----EVQNTkQALK 937
Cdd:TIGR01612 1840 EYSKINEgfddISKSIENVKNSTDENLLFDILNKTKDAYAGIIGKKYYSYKDEAEKIFINISKLANsiniQIQNN-SGID 1918
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 938 KLETREVVDLSKYKATKSDLETQISSlNEKLANLNRKYEEVCEEVLHA-KKKEISAKDEKELLHFSIEQEIKDQKERCDK 1016
Cdd:TIGR01612 1919 LFDNINIAILSSLDSEKEDTLKFIPS-PEKEPEIYTKIRDSYDTLLDIfKKSQDLHKKEQDTLNIIFENQQLYEKIQASN 1997
|
1130 1140 1150 1160 1170
....*....|....*....|....*....|....*....|....*....|..
gi 1622953786 1017 SLttitelqrriQESAKQIEAKDNKItelLNDVERLKQALNGLSQLTYTSGN 1068
Cdd:TIGR01612 1998 EL----------KDTLSDLKYKKEKI---LNDVKLLLHKFDELNKLSCDSQN 2036
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
849-1060 |
9.76e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.38 E-value: 9.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 849 IENLKEELKNMQ-RCYEKEQQTVTKLHQLLENQKNssvplAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQS 927
Cdd:PRK05771 33 IEDLKEELSNERlRKLRSLLTKLSEALDKLRSYLP-----KLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 928 EVQNTKQALKKLEtREVVDLSKYKATKSDLETQISSLN----------EKLANLNRKYEEVCEEVLHAKK---------- 987
Cdd:PRK05771 108 EISELENEIKELE-QEIERLEPWGNFDLDLSLLLGFKYvsvfvgtvpeDKLEELKLESDVENVEYISTDKgyvyvvvvvl 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 988 KEISAKDEKELLHFS-IEQEIKDQK---ERCDKSLTTITELQRRIQESAKQIEAKDNKITE--------LLNDVERLKQA 1055
Cdd:PRK05771 187 KELSDEVEEELKKLGfERLELEEEGtpsELIREIKEELEEIEKERESLLEELKELAKKYLEellalyeyLEIELERAEAL 266
|
....*
gi 1622953786 1056 LNGLS 1060
Cdd:PRK05771 267 SKFLK 271
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
780-1041 |
1.03e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 780 RALSRKTDELNKQLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNM 859
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 860 QRCYEKeqqtvtklhQLLENQKNSSVPLAEHLQIKEAFEkEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKkl 939
Cdd:COG4942 103 KEELAE---------LLRALYRLGRQPPLALLLSPEDFL-DAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE-- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 940 etrevvdlskykATKSDLETQISSLNEKLANLNrkyeevceevlhakkkeiSAKDEKELLHFSIEQEIKDQKERCDKSLT 1019
Cdd:COG4942 171 ------------AERAELEALLAELEEERAALE------------------ALKAERQKLLARLEKELAELAAELAELQQ 220
|
250 260
....*....|....*....|..
gi 1622953786 1020 TITELQRRIQESAKQIEAKDNK 1041
Cdd:COG4942 221 EAEELEALIARLEAEAAAAAER 242
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
792-971 |
1.32e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 792 QLKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNmqrcYEKEQQTVT 871
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKK----YEEQLGNVR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 872 KLHQLlenqknssvplaehlqikEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYK 951
Cdd:COG1579 87 NNKEY------------------EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
170 180
....*....|....*....|
gi 1622953786 952 ATKSDLETQISSLNEKLANL 971
Cdd:COG1579 149 EELAELEAELEELEAEREEL 168
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
352-1044 |
1.48e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.12 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 352 KFENMKSSLSNEVNekakKLVEMEREHEKS-LSEIRQLKRELENVKAKLAQHIKLEEHEQVKSRLE---QKSGELGKKIT 427
Cdd:TIGR01612 697 KLDDLKSKIDKEYD----KIQNMETATVELhLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILEdfkNKEKELSNKIN 772
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 428 ELTLKNQTLQKEIEKVYldnkllkeqahnltiEMKNHYvplkvsedmkksHDAIIDDlNRKVLDVTQKYTEKKLEMEKLL 507
Cdd:TIGR01612 773 DYAKEKDELNKYKSKIS---------------EIKNHY------------NDQINID-NIKDEDAKQNYDKSKEYIKTIS 824
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 508 LENDSLSKDVNrletvfvppekhekEVTALKSSIVELKKQLSELKKKCGEDQEKIHALTSENSN-LKKMMSNEYVPVKTH 586
Cdd:TIGR01612 825 IKEDEIFKIIN--------------EMKFMKDDFLNKVDKFINFENNCKEKIDSEHEQFAELTNkIKAEISDDKLNDYEK 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 587 EeikmtLNNTLAKTNKELLDVKKKFEDIN-----QEFVKIKDKNEILKRNLENTQNQIKaeyislaeheakmSSLSQSMR 661
Cdd:TIGR01612 891 K-----FNDSKSLINEINKSIEEEYQNINtlkkvDEYIKICENTKESIEKFHNKQNILK-------------EILNKNID 952
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 662 KVQDSNAeILANYRKGQEEIVTlhaeikAQKKELDTIqecikVKYAPIVSFEECERKFKATEKELKDQLSeqTQKYSVSE 741
Cdd:TIGR01612 953 TIKESNL-IEKSYKDKFDNTLI------DKINELDKA-----FKDASLNDYEAKNNELIKYFNDLKANLG--KNKENMLY 1018
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 742 EEVKKNKQENDRLKKEIFTLQKDLRDKTVLIEKS-----HEMERALSRKTDELNKQ-LKDLSQKYAEIKNVKEKLV---- 811
Cdd:TIGR01612 1019 HQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSiyniiDEIEKEIGKNIELLNKEiLEEAEINITNFNEIKEKLKhynf 1098
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 812 -----EENAKQTSEILAVQNllqkqhvpleQVEALKKSLNGTIENLkEELKNMQRCYEKEQQT-VTKLHQLLENQKNSSV 885
Cdd:TIGR01612 1099 ddfgkEENIKYADEINKIKD----------DIKNLDQKIDHHIKAL-EEIKKKSENYIDEIKAqINDLEDVADKAISNDD 1167
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 886 PlaehlqikEAFEKEVGIIKASLREKeeesQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLN 965
Cdd:TIGR01612 1168 P--------EEIEKKIENIVTKIDKK----KNIYDEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEK 1235
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 966 EKLANLNRKYEEVCEEVLHAKKKEISAKDEKEL-LHFSIEQEIKDQKERCDKSLTTITelqRRIQESAKQIEAKDNKITE 1044
Cdd:TIGR01612 1236 KKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIeMDIKAEMETFNISHDDDKDHHIIS---KKHDENISDIREKSLKIIE 1312
|
|
| CagA_N |
pfam18971 |
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial ... |
628-879 |
1.57e-03 |
|
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial virulence determinant and critical for gastric carcinogenesis. X-ray crystallographic analysis of the N-terminal CagA fragment (residues 1-876) revealed that the region has a structure comprised of three discrete domains. Domain I constitutes a mobile CagA N terminus, while Domain II tethers CagA to the plasma membrane by interacting with membrane phosphatidylserine. Domain III interacts intramolecularly with the intrinsically disordered C-terminal region, and this interaction potentiates the pathogenic scaffold/hub function of CagA.
Pssm-ID: 408741 [Multi-domain] Cd Length: 876 Bit Score: 42.84 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 628 LKRNLENtqnQIKAEYISLAEHEAKMSSLSQSMRKVqdsnAEILANYRKGQEEIVTL--HAEIKAQKKELdtiqecikvk 705
Cdd:pfam18971 557 VRRNLEN---KLTAKGLSLQEANKLIKDFLSSNKEL----AGKALNFNKAVAEAKSTgnYDEVKKAQKDL---------- 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 706 yapivsfEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQendrlKKEIFTL--QKDLRDKTVL--IEKSHEMERA 781
Cdd:pfam18971 620 -------EKSLRKREHLEKEVEKKLESKSGNKNKMEAKAQANSQ-----KDEIFALinKEANRDARAIayTQNLKGIKRE 687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 782 LSRKTDELNKQLKDLSQKYAEIKNVKEKlveENAKQTSEILAVQNLLQKQHVPLEQVEalkkslngTIENLKEELKNMQR 861
Cdd:pfam18971 688 LSDKLEKISKDLKDFSKSFDEFKNGKNK---DFSKAEETLKALKGSVKDLGINPEWIS--------KVENLNAALNEFKN 756
|
250
....*....|....*...
gi 1622953786 862 CYEKEQQTVTKLHQLLEN 879
Cdd:pfam18971 757 GKNKDFSKVTQAKSDLEN 774
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
17-641 |
1.68e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.74 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 17 IQDLEIENEDLKERLRKIQQEQRILLDKVngLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALKNRFKY 96
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKL--EEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 97 FESDHLGSGSHFSNRKEDMLLKQGQmymadsqctSPGIPAHMQSRSMLRPLELSLPSQTSYSENeiLKKELEA------- 169
Cdd:TIGR02168 480 AERELAQLQARLDSLERLQENLEGF---------SEGVKALLKNQSGLSGILGVLSELISVDEG--YEAAIEAalggrlq 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 170 ---MRTFcESAKQDRLKLQNELAHKVAECkALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVkqmqthflalke 246
Cdd:TIGR02168 549 avvVENL-NAAKKAIAFLKQNELGRVTFL-PLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKL------------ 614
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 247 HLTSEAASGNHRLTEELKDQLKDMKAKYEGAsaevgklRNQIKQNEMIVEEFKRDEGKLIEENKRLQKelsmcEMEREKK 326
Cdd:TIGR02168 615 RKALSYLLGGVLVVDDLDNALELAKKLRPGY-------RIVTLDGDLVRPGGVITGGSAKTNSSILER-----RREIEEL 682
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 327 GRKVKEMEGQAKELLAKLA-LSIPAEKFENMKSSLSNEVNEKAKKLVEM-------EREHEKSLSEIRQLKRELENVKAK 398
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAeLRKELEELEEELEQLRKELEELSRQISALrkdlarlEAEVEQLEERIAQLSKELTELEAE 762
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 399 LA-QHIKLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKS 477
Cdd:TIGR02168 763 IEeLEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLED 842
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 478 HDAIIDDLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLEtvfVPPEKHEKEVTALKSSIVELKKQLSELKKKCGE 557
Cdd:TIGR02168 843 LEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE---EALALLRSELEELSEELRELESKRSELRRELEE 919
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 558 DQEKIHALtsensNLKKmmsneyvpvkthEEIKMTLNNTLAKTNKELLDVkkkFEDINQEFVKIKDKNEILKRNLENTQN 637
Cdd:TIGR02168 920 LREKLAQL-----ELRL------------EGLEVRIDNLQERLSEEYSLT---LEEAEALENKIEDDEEEARRRLKRLEN 979
|
....
gi 1622953786 638 QIKA 641
Cdd:TIGR02168 980 KIKE 983
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
469-842 |
2.25e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.92 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 469 KVSEDMKKSHDAIIDDLNRKVLDVTQKYTeKKLEMEKLLLENDSLSKDVNRLETVFvppEKHEKEVTALKSSIVELKKQL 548
Cdd:NF033838 73 EIQKSLDKRKHTQNVALNKKLSDIKTEYL-YELNVLKEKSEAELTSKTKKELDAAF---EQFKKDTLEPGKKVAEATKKV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 549 SELKKKCGEDQEKIHaltsensnlkkmmsnEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKD-KNEI 627
Cdd:NF033838 149 EEAEKKAKDQKEEDR---------------RNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRDEEKIKQaKAKV 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 628 LKRNLENTQ-NQIKAEYiSLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKV-- 704
Cdd:NF033838 214 ESKKAEATRlEKIKTDR-EKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKRGVLGEPATPDKKENDAKSSDSSVge 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 705 ------KYAPIVSFEECERKFKATEKELKDQLSEQTQKY----------SVSEEEVKKNKQENDRLK---KEIFTLQKDL 765
Cdd:NF033838 293 etlpspSLKPEKKVAEAEKKVEEAKKKAKDQKEEDRRNYptntyktlelEIAESDVKVKEAELELVKeeaKEPRNEEKIK 372
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622953786 766 RDKTVLIEKSHEMERALSRKTDElNKQLKDLSQKYAEIKNVKEKLVEEnaKQTSEILAVQNLLQKQHVPLEQVEALK 842
Cdd:NF033838 373 QAKAKVESKKAEATRLEKIKTDR-KKAEEEAKRKAAEEDKVKEKPAEQ--PQPAPAPQPEKPAPKPEKPAEQPKAEK 446
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
308-1052 |
2.49e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 308 ENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKLalsipaEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQ 387
Cdd:TIGR00618 160 AKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKA------ELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLRE 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 388 LKRELENVKAKLAQHIKLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVP 467
Cdd:TIGR00618 234 ALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 468 LKVSEDMKKSHDAIiddLNRKVLDVTQKYTEKKLEMEKLLLENDSLSKDVNRLETVFVPPEKHEKEVT----ALKSSIVE 543
Cdd:TIGR00618 314 TELQSKMRSRAKLL---MKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTqhihTLQQQKTT 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 544 LKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVPVKTHEEIKMTLNNTLAKTNKELLDVKKKFEDINQEFVKIKD 623
Cdd:TIGR00618 391 LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 624 KNEILKrnleNTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEiLANYRKGQEEIVTLHAEIKAQKKELDTIQECIK 703
Cdd:TIGR00618 471 REQQLQ----TKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIH-PNPARQDIDNPGPLTRRMQRGEQTYAQLETSEE 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 704 VKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIftlQKDLRDKTVLIEKSHEMERALS 783
Cdd:TIGR00618 546 DVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLT---EKLSEAEDMLACEQHALLRKLQ 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 784 RKTDELNKQLKD--LSQKYAEIKNVKEKLVEENAKQTSEILAVQNLLQKQHVpLEQVEALKKSLNGTIENL---KEELKN 858
Cdd:TIGR00618 623 PEQDLQDVRLHLqqCSQELALKLTALHALQLTLTQERVREHALSIRVLPKEL-LASRQLALQKMQSEKEQLtywKEMLAQ 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 859 MQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEafekevgiikaslrEKEEESQNKMEEVSKLQSEVQNTKQALKK 938
Cdd:TIGR00618 702 CQTLLRELETHIEEYDREFNEIENASSSLGSDLAARE--------------DALNQSLKELMHQARTVLKARTEAHFNNN 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 939 LE-TREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVlhakKKEISAKDEKELLHFSIEQEIKDQKERCDKS 1017
Cdd:TIGR00618 768 EEvTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEI----PSDEDILNLQCETLVQEEEQFLSRLEEKSAT 843
|
730 740 750
....*....|....*....|....*....|....*
gi 1622953786 1018 LTTITELQRRIQESAKQIEAKDNKITELLNDVERL 1052
Cdd:TIGR00618 844 LGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
200-679 |
2.54e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.99 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 200 LECERVKEDSDEQIKQLEDALKdvQKRMYESE------GKVKQMQTHFLALKEHLTSEAASGN----HRLTEELKDQLKD 269
Cdd:COG5022 816 LACIIKLQKTIKREKKLRETEE--VEFSLKAEvliqkfGRSLKAKKRFSLLKKETIYLQSAQRvelaERQLQELKIDVKS 893
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 270 MKAKYEGAS---AEVGKLRNQIKQNEMIVEEFKRDEGKLIEE--NKRLQKELSMCEMEREKKGRKVKEMEGQAKELlakl 344
Cdd:COG5022 894 ISSLKLVNLeleSEIIELKKSLSSDLIENLEFKTELIARLKKllNNIDLEEGPSIEYVKLPELNKLHEVESKLKET---- 969
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 345 alsipAEKFENMksslsnevnekAKKLVEMEREHEKSLSEIRQLKREL----------------------ENVKAKLAQH 402
Cdd:COG5022 970 -----SEEYEDL-----------LKKSTILVREGNKANSELKNFKKELaelskqygalqestkqlkelpvEVAELQSASK 1033
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 403 IKLEEHEQVKSRL-EQKS-GELGKKITELT--LKNQTLQKEIEKVYLDNKLLKEQAHNL--TIEMKN------------H 464
Cdd:COG5022 1034 IISSESTELSILKpLQKLkGLLLLENNQLQarYKALKLRRENSLLDDKQLYQLESTENLlkTINVKDlevtnrnlvkpaN 1113
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 465 YVPLKVSEDMKKSHDAIIDDLNRKVLDVTQKYTEKkleMEKLLLENDSLSKDVNRLETVFVPPEKHEKEVTALKSSIVEL 544
Cdd:COG5022 1114 VLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQK---LSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDE 1190
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 545 KKQLS-----ELKKKCGEDQEKIHALTSENSNLKKMMSNEYVPVKTHEEIKMTLN------NTLAKTNKELLDVKKKFED 613
Cdd:COG5022 1191 KSKLSssevnDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNNlnkkfdTPASMSNEKLLSLLNSIDN 1270
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 614 INQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQsmrkvQDSNAEILANYRKGQE 679
Cdd:COG5022 1271 LLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATE-----VNYNSEELDDWCREFE 1331
|
|
| Gp58 |
pfam07902 |
gp58-like protein; Sequences found in this family are derived from a number of bacteriophage ... |
777-1084 |
3.01e-03 |
|
gp58-like protein; Sequences found in this family are derived from a number of bacteriophage and prophage proteins. They are similar to gp58, a minor structural protein of Lactococcus delbrueckii bacteriophage LL-H.
Pssm-ID: 369586 [Multi-domain] Cd Length: 594 Bit Score: 41.48 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 777 EMERALSrKTDELNKQLKDL--SQKYAEIK-NVKEKLVE-ENAKQTSEILAVQNLLQKQHVplEQVEALKKSLNGTIENL 852
Cdd:pfam07902 79 SLEEMLS-QLKELNLELTDTknSNLWSKIKlNNNGMLREyHNDTIKTEIVESAEGIATRIS--EDTDKKLALINETISGI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 853 KEELKNMQR-CYEKEQQTVTKLHQLLENQKNSsvplaehlqikeafekevgiikaslrekeeesqnkmeevskLQSEVQN 931
Cdd:pfam07902 156 RREYQDADRqLSSSYQAGIEGLKATMASDKIG-----------------------------------------LQAEIQA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 932 TKQALKKLETREVVDLS-KYKATKSDletQISSLNEKLANLNRKYEEVCEEVLHAKKKEISA-KDEKELLHFSIEQEIKD 1009
Cdd:pfam07902 195 SAQGLSQRYDNEIRKLSaKITTTSSG---TTEAYESKLDDLRAEFTRSNQGMRTELESKISGlQSTQQSTAYQISQEISN 271
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953786 1010 QKERCDKSLTTITELQRRIQESAKQIEAkdnkitellndverLKQALNGL-SQLTYTSGNPTKRQSQLIDTLQHQV 1084
Cdd:pfam07902 272 REGAVSRVQQDLDSYQRRLQDAEKNYSS--------------LTQTVKGLqSTVSDPNSKLESRITQLAGLIEQKV 333
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
11-442 |
3.83e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 3.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 11 QREHQNIQDLEIENEDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEAL 90
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 91 KNrfkyfESDHLGSGSHFSNRKEDMLLKQGQMYMADSQctSPGIPAHMQSRSMLRPLELSLPSQTSYSENEILKKELEAM 170
Cdd:COG1196 476 EA-----ALAELLEELAEAAARLLLLLEAEADYEGFLE--GVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAL 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 171 RTFCESAKQDRLKLQNEL-AHKVAECKALALECERVKEDSDEQIKQLED----ALKDVQKRMYESEGKVKQMQTHFLALK 245
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLkAAKAGRATFLPLDKIRARAALAAALARGAIgaavDLVASDLREADARYYVLGDTLLGRTLV 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 246 EHLTSEAASGNHRLTEELKDQLKDMKAKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQ-KELSMCEMERE 324
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEeALLAEEEEERE 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 325 KKGRKVKEMEGQAKELLAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELE-----NVKAkl 399
Cdd:COG1196 709 LAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEalgpvNLLA-- 786
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1622953786 400 aqhikLEEHEQVKSRLEqksgelgkkitELTLKNQTLQKEIEK 442
Cdd:COG1196 787 -----IEEYEELEERYD-----------FLSEQREDLEEARET 813
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
719-1013 |
4.06e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 719 FKATEK--ELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKdlrdktvlIEKSHEME---RALSRKTDELNKQL 793
Cdd:COG4913 606 FDNRAKlaALEAELAELEEELAEAEERLEALEAELDALQERREALQR--------LAEYSWDEidvASAEREIAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 794 KDLSQKYAEIKNVKEKLVEENAKqtseilavqnllqkqhvpLEQVEALKKSLNGTIENLKEELKNMQRcyekEQQTVTkl 873
Cdd:COG4913 678 ERLDASSDDLAALEEQLEELEAE------------------LEELEEELDELKGEIGRLEKELEQAEE----ELDELQ-- 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 874 HQLLENQKNSSVPLAEHLQikEAFEkevgiikaslREKEEESQNKMEEvsKLQSEVQNTKQALKKLETReVVDL-----S 948
Cdd:COG4913 734 DRLEAAEDLARLELRALLE--ERFA----------AALGDAVERELRE--NLEERIDALRARLNRAEEE-LERAmrafnR 798
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622953786 949 KYKATKSDLETQISSLNEKLAnlnrKYEEVCEEVLHAKKKEI------SAKDEKELLHFSIEQEIKDQKER 1013
Cdd:COG4913 799 EWPAETADLDADLESLPEYLA----LLDRLEEDGLPEYEERFkellneNSIEFVADLLSKLRRAIREIKER 865
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
718-1036 |
4.17e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 40.97 E-value: 4.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 718 KFKATEKELKD---QLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRD--KTVLiEKSHEMERALsrktDELNKQ 792
Cdd:PRK04778 99 RFRKAKHEINEiesLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRElrKSLL-ANRFSFGPAL----DELEKQ 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 793 LKDLSQKYAEIKNVKEKLVEENAKQTSEILAVQ-NLLQKQ--HVPlEQVEALKKSLNGTIENLKEELKNMQRC-YEKEQQ 868
Cdd:PRK04778 174 LENLEEEFSQFVELTESGDYVEAREILDQLEEElAALEQImeEIP-ELLKELQTELPDQLQELKAGYRELVEEgYHLDHL 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 869 TVTKLHQLLENQKNSSVPLAEHLQIKEAfEKEVGIIKA------SLREKEEESQNKMEE-VSKLQSEVQNTKQALKKLET 941
Cdd:PRK04778 253 DIEKEIQDLKEQIDENLALLEELDLDEA-EEKNEEIQEridqlyDILEREVKARKYVEKnSDTLPDFLEHAKEQNKELKE 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 942 R-EVVDLSkYKATKSDLETQiSSLNEKLANLNRKYEEVCEEVlhaKKKEISakdekellhFSieqEIKDQKERCDKSLTT 1020
Cdd:PRK04778 332 EiDRVKQS-YTLNESELESV-RQLEKQLESLEKQYDEITERI---AEQEIA---------YS---ELQEELEEILKQLEE 394
|
330
....*....|....*.
gi 1622953786 1021 ITELQRRIQESAKQIE 1036
Cdd:PRK04778 395 IEKEQEKLSEMLQGLR 410
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
593-804 |
4.43e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 593 LNNTLAKTNKELLDVKKKFEDINQEFVKIKDKNEILK------------RNLENTQNQIKAEyisLAEHEAKMSSLSQSM 660
Cdd:COG3206 173 ARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDlseeaklllqqlSELESQLAEARAE---LAEAEARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 661 RKVQDSNAEILANyrkgqEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFeecerkfKATEKELKDQLSEQTQKYSVS 740
Cdd:COG3206 250 GSGPDALPELLQS-----PVIQQLRAQLAELEAELAELSARYTPNHPDVIAL-------RAQIAALRAQLQQEAQRILAS 317
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622953786 741 -EEEVKKNKQENDRLKKEIFTLQKDLRDktvLIEKSHEMERaLSRKTDELNKQLKDLSQKYAEIK 804
Cdd:COG3206 318 lEAELEALQAREASLQAQLAQLEARLAE---LPELEAELRR-LEREVEVARELYESLLQRLEEAR 378
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
728-927 |
4.46e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 4.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 728 DQLSEQTQKYSVSEEEVKKNKQENDRLKkEIFTLQKDLRDKTVLIEKSHEMERAL-----SRKTDELNKQLKDLSQKYAE 802
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 803 IKNVKEKLVEENAKQTSEILAVQNLLQKQhvPLEQVEALKKSlngtIENLKEELKNMQRCYEKEQQTVTKLH-------- 874
Cdd:COG4913 307 LEAELERLEARLDALREELDELEAQIRGN--GGDRLEQLERE----IERLERELEERERRRARLEALLAALGlplpasae 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1622953786 875 QLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQS 927
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
210-420 |
4.90e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.77 E-value: 4.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 210 DEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASgNHRLTEELKDQLKDMKAKYEGASAEVGKLRNQIK 289
Cdd:PHA02562 187 DMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKT-IKAEIEELTDELLNLVMDIEDPSAALNKLNTAAA 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 290 QNEMIVEEFKRDE-----------------------GKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKELLAKlal 346
Cdd:PHA02562 266 KIKSKIEQFQKVIkmyekggvcptctqqisegpdriTKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLEL--- 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622953786 347 sipAEKFENMKSSLSNEVNEKAKKLVEMER---EHEKSLSEIRQLKRELENVKAKLAQHIKLEEHEQVKSRLEQKSG 420
Cdd:PHA02562 343 ---KNKISTNKQSLITLVDKAKKVKAAIEElqaEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKDSG 416
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
207-440 |
5.02e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.18 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 207 EDSDEQIKQLEDALKDVQKRMYESEGKVKQMQThflalkehltseaasgnhrlTEELKDQLKDMKAKYEGASAEVGKLRN 286
Cdd:PRK02224 471 EEDRERVEELEAELEDLEEEVEEVEERLERAED--------------------LVEAEDRIERLEERREDLEELIAERRE 530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 287 QIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVKEMEGQAKEL------LAKLALSIpaEKFENMKSSL 360
Cdd:PRK02224 531 TIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELkeriesLERIRTLL--AAIADAEDEI 608
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 361 SnEVNEKAKKLVEMEREHEKSLSEIRQLKRELEnvkAKLaQHIKLEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEI 440
Cdd:PRK02224 609 E-RLREKREALAELNDERRERLAEKRERKRELE---AEF-DEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEI 683
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
906-1120 |
5.20e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.08 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 906 ASLREKEEESQNKMEEVS-------------------------------KLQSEVQNTKQALKKLETREV-VDLSKYKAT 953
Cdd:COG1196 168 SKYKERKEEAERKLEATEenlerledilgelerqleplerqaekaeryrELKEELKELEAELLLLKLRELeAELEELEAE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 954 KSDLETQISSLNEKLANLNRKYEEVcEEVLHAKKKEISAKDEKELLHFS----IEQEIKDQKERCDKSLTTITELQRRIQ 1029
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEEL-RLELEELELELEEAQAEEYELLAelarLEQDIARLEERRRELEERLEELEEELA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1030 ESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQhQEVIAIYRTHL 1109
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA-AAELAAQLEEL 405
|
250
....*....|.
gi 1622953786 1110 LSAAQGHMDED 1120
Cdd:COG1196 406 EEAEEALLERL 416
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
720-935 |
6.70e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 6.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 720 KATEKELKDQLSEQTQKYSVSEEEVKKNKQENDRLKKEIFTLQKDLRdktvliekshEMERALSRKTDELNKQLKDLSQK 799
Cdd:COG3883 29 QAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIA----------EAEAEIEERREELGERARALYRS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 800 YAEIKNVKEKLveeNAKQTSEIL----AVQNLLQKQHVPLEQVEALKKSLngtiENLKEELKNMQRCYEKEQQTVTKLHQ 875
Cdd:COG3883 99 GGSVSYLDVLL---GSESFSDFLdrlsALSKIADADADLLEELKADKAEL----EAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 876 LLENQKnssvplAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQA 935
Cdd:COG3883 172 ELEAQQ------AEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
841-1013 |
6.99e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 6.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 841 LKKSLNGTIENLKEELKNMQRCYEKEQQTVTKLhQLLENQKnssvplaEHLQIKEAFEKEVGIIKASLREKEEESQNKME 920
Cdd:PRK12704 25 RKKIAEAKIKEAEEEAKRILEEAKKEAEAIKKE-ALLEAKE-------EIHKLRNEFEKELRERRNELQKLEKRLLQKEE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 921 EVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKL---ANLNRkyEEVCEEVLHAKKKEisAKDEKE 997
Cdd:PRK12704 97 NLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELeriSGLTA--EEAKEILLEKVEEE--ARHEAA 172
|
170
....*....|....*.
gi 1622953786 998 LLHFSIEQEIKDQKER 1013
Cdd:PRK12704 173 VLIKEIEEEAKEEADK 188
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
686-821 |
7.49e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.15 E-value: 7.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 686 AEIKAQKKELDTIQECIKVKyapivsfEECERKFKATEKELKDQLSEQTQKysvsEEEVKKNKQENDRLKKEIFTLQKDL 765
Cdd:PRK12704 51 AEAIKKEALLEAKEEIHKLR-------NEFEKELRERRNELQKLEKRLLQK----EENLDRKLELLEKREEELEKKEKEL 119
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622953786 766 RDKTVLIEKsheMERALSRKTDELNKQLKDLSQKYAE------IKNVKEKLVEENAKQTSEI 821
Cdd:PRK12704 120 EQKQQELEK---KEEELEELIEEQLQELERISGLTAEeakeilLEKVEEEARHEAAVLIKEI 178
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
468-703 |
7.84e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.38 E-value: 7.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 468 LKVSEDMKKSHDAIIDDLNR--KVLDVTQKYTEKKLEM-EKLLLENDSLSKD-VNRLETVFvppEKHEKEVTALKSSIVE 543
Cdd:PHA02562 162 ISVLSEMDKLNKDKIRELNQqiQTLDMKIDHIQQQIKTyNKNIEEQRKKNGEnIARKQNKY---DELVEEAKTIKAEIEE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 544 LKKQLSELKKKCGEDQEKIHALTSENSNLKKMMSNEYVPVKTHEE--IKMTLNNTLAKTNKELLDVKKKFEDINQEFVKI 621
Cdd:PHA02562 239 LTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKggVCPTCTQQISEGPDRITKIKDKLKELQHSLEKL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 622 KDKNEILK----------RNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDS---NAEILANYRKGQEEIVTLHAEI 688
Cdd:PHA02562 319 DTAIDELEeimdefneqsKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEfvdNAEELAKLQDELDKIVKTKSEL 398
|
250
....*....|....*
gi 1622953786 689 KAQKKELDTIQECIK 703
Cdd:PHA02562 399 VKEKYHRGIVTDLLK 413
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
538-845 |
8.18e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 40.28 E-value: 8.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 538 KSSIVELKKQLSELKKKCGEDQEKIHALTSEN-SNLKKMMSNEYVPvktheeikmTLNNTLAKTNKELLDVKKKFEDINQ 616
Cdd:PRK11281 79 KEETEQLKQQLAQAPAKLRQAQAELEALKDDNdEETRETLSTLSLR---------QLESRLAQTLDQLQNAQNDLAEYNS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 617 EFVKikdkneiLKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILanyrkgQEEIVTLHAEIKAQKKEL- 695
Cdd:PRK11281 150 QLVS-------LQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLL------QAEQALLNAQNDLQRKSLe 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 696 --DTIQECIKVKYapivsfEECERKFKATEKELKD----------QLSEQTQKYSVSEEEVKKnKQENDRLKKEiftlqk 763
Cdd:PRK11281 217 gnTQLQDLLQKQR------DYLTARIQRLEHQLQLlqeainskrlTLSEKTVQEAQSQDEAAR-IQANPLVAQE------ 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 764 dlrdktvlIEKSHEMERALSRKTDELNkqlkDLSQKYAEIKNVKEklveenakqtseilavqNLLQKQHVPLEQVEALKK 843
Cdd:PRK11281 284 --------LEINLQLSQRLLKATEKLN----TLTQQNLRVKNWLD-----------------RLTQSERNIKEQISVLKG 334
|
..
gi 1622953786 844 SL 845
Cdd:PRK11281 335 SL 336
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
805-1114 |
8.52e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.33 E-value: 8.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 805 NVKEKLVEENAKQTS--EILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKNMQ---RCYEKEQQTVTKLHQLLEN 879
Cdd:PRK04863 284 HLEEALELRRELYTSrrQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQtalRQQEKIERYQADLEELEER 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 880 qknssvpLAEHLQIKEafekEVGIIKASLREKEEESQnkmEEVSKLQSEVQNTKQALKKLETR------EVVDLSKYKAT 953
Cdd:PRK04863 364 -------LEEQNEVVE----EADEQQEENEARAEAAE---EEVDELKSQLADYQQALDVQQTRaiqyqqAVQALERAKQL 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 954 KSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLH--FSIEQEIKDQKERCD-----KSLTTITELQR 1026
Cdd:PRK04863 430 CGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEqaYQLVRKIAGEVSRSEawdvaRELLRRLREQR 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 1027 RIQESAKQIEAKDNKITELLN---DVERLKQALNGLSQLTYTS----GNPTKRQSQLIDTLQHQVKSLEQQLADAdRQHQ 1099
Cdd:PRK04863 510 HLAEQLQQLRMRLSELEQRLRqqqRAERLLAEFCKRLGKNLDDedelEQLQEELEARLESLSESVSEARERRMAL-RQQL 588
|
330
....*....|....*
gi 1622953786 1100 EVIAIYRTHLLSAAQ 1114
Cdd:PRK04863 589 EQLQARIQRLAARAP 603
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
216-417 |
8.90e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.14 E-value: 8.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 216 LEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLtEELKDQLKDMKAKYEGASAEVGKLRNQI------K 289
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEY-AELQEELEELEEELEELEAELEELREELekleklL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953786 290 QNEMIVEEFKRDEGKLIEENKRLQkELSMCEMEREKKGRKVKEMEGQAKELLAKLalsipAEKFENMKSSLSNEVNEKAK 369
Cdd:COG4717 126 QLLPLYQELEALEAELAELPERLE-ELEERLEELRELEEELEELEAELAELQEEL-----EELLEQLSLATEEELQDLAE 199
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622953786 370 KLVEMEREHEKSLSEIRQLKRELENVKAKLAQHIKLEEHEQVKSRLEQ 417
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKE 247
|
|
| |
