|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
273-583 |
6.80e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 6.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 273 QKRQQLVRKIHEDELNDMKDYLSQCQQEQESFVDYKSLKENLARCWTLT--EAEKMSFETQKTNLATENQYLRISLEKEE 350
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKkkEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 351 KALSSLQEELNKLREQIRILEDKGT-STELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVTTALR 429
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKkEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAK 1750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 430 GELQQLSG-SQLHGKSDSPNVYTEKKEIAVLRERLSElerkltfeqqrSDLWERLYVEAKDQSGKQETDGKKKGGRGNHR 508
Cdd:PTZ00121 1751 KDEEEKKKiAHLKKEEEKKAEEIRKEKEAVIEEELDE-----------EDEKRRMEVDKKIKDIFDNFANIIEGGKEGNL 1819
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953243 509 AKNKSKETFLGSVKETFDA---MKNSTKEFVRHHKEKIKQAKEAVKENlkkfSDSVKSTFrHFKDTTKNIFDEKGNKR 583
Cdd:PTZ00121 1820 VINDSKEMEDSAIKEVADSknmQLEEADAFEKHKFNKNNENGEDGNKE----ADFNKEKD-LKEDDEEEIEEADEIEK 1892
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
322-549 |
1.34e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 322 EAEKMSFETQKTNLATENQYLRISLEKEEKALSSLQEELNKLREQI-RILEDKGTSTELVRENQKLKQHLEEEKQKKHSF 400
Cdd:COG1196 252 EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELaRLEQDIARLEERRRELEERLEELEEELAELEEE 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 401 LSQRETLLAEAKMLKRELERERlvtTALRGELQQLsgsqlhgksdspnvytEKKEIAVLRERLSELERKLTFEQQRSDLW 480
Cdd:COG1196 332 LEELEEELEELEEELEEAEEEL---EEAEAELAEA----------------EEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622953243 481 ERLYVEAKDQSGKQETDGKKKGGRGNHRAKNKSKETFLGSVKETFDAMKNSTKEFVRHHKEKIKQAKEA 549
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
347-470 |
6.84e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.47 E-value: 6.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 347 EKEEKALSSLQEELNKLREQIRiledkgtstELVRENQKLKQHLEEEKQKkhsfLSQRETLLAEAKMLKRELERERLVTT 426
Cdd:COG2433 402 EHEERELTEEEEEIRRLEEQVE---------RLEAEVEELEAELEEKDER----IERLERELSEARSEERREIRKDREIS 468
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1622953243 427 ALRGELQQLsgsqlhgksdspnvyteKKEIAVLRERLSELERKL 470
Cdd:COG2433 469 RLDREIERL-----------------ERELEEERERIEELKRKL 495
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
294-554 |
9.03e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.67 E-value: 9.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 294 LSQCQQEQESfvDYKSLKENLARcwTLTEAEKMsfETQKTNLATENQYLRISLEKEEKALSSLQEELNKLREQIRILEDk 373
Cdd:TIGR02168 682 LEEKIEELEE--KIAELEKALAE--LRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSK- 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 374 gTSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVTTALRGELQQLSGS----QLHGKSDSPNV 449
Cdd:TIGR02168 755 -ELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEaanlRERLESLERRI 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 450 YTEKKEIAVLRERLSELERKLTF-EQQRSDLWERLYVEAKDQSGKQETDGKKKGGRGNHRAKNKSKETFLGSVKETFDAM 528
Cdd:TIGR02168 834 AATERRLEDLEEQIEELSEDIESlAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
250 260
....*....|....*....|....*.
gi 1622953243 529 KNSTKEfVRHHKEKIKQAKEAVKENL 554
Cdd:TIGR02168 914 RRELEE-LREKLAQLELRLEGLEVRI 938
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
338-490 |
1.01e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 338 ENQYLRISLEKEEKALSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSF---LSQRETLLAEAKML 414
Cdd:COG4717 89 EYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLEELeerLEELRELEEELEEL 168
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622953243 415 KRELERERlvtTALRGELQQLSGSQLHGKSDSPNVYTE-KKEIAVLRERLSELERKLTFEQQRSDLWERLYVEAKDQ 490
Cdd:COG4717 169 EAELAELQ---EELEELLEQLSLATEEELQDLAEELEElQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE 242
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
338-435 |
1.15e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.09 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 338 ENQYLRISLEKEEKALSSLQEELNKLREQIRILEDKgtSTELVRENQKLKQHLEEEKQKKHS-FLSQRE--TLLAEAKML 414
Cdd:COG2433 400 EKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAE--LEEKDERIERLERELSEARSEERReIRKDREisRLDREIERL 477
|
90 100
....*....|....*....|.
gi 1622953243 415 KRELERERLVTTALRGELQQL 435
Cdd:COG2433 478 ERELEEERERIEELKRKLERL 498
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
274-482 |
1.26e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 274 KRQQLVRKIHEDELNdMKDYLSQCQQEQESFVDYKSLKENLARCWTLTEAEKMSFETQKTNLATENQYLRISLEKEEKAL 353
Cdd:TIGR02169 302 EIASLERSIAEKERE-LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 354 SSLQEELNKLREQIRILEDKgtSTELVRENQKlkqhLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVT----TALR 429
Cdd:TIGR02169 381 AETRDELKDYREKLEKLKRE--INELKRELDR----LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKaleiKKQE 454
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1622953243 430 GELQQLSGSQlhgKSDSPNVYTEKKEIAVLRERLSELERKLTFEQQRSDLWER 482
Cdd:TIGR02169 455 WKLEQLAADL---SKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE 504
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
339-476 |
1.33e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 339 NQYLRISLEKE----EKALSSLQEELNKLREQIRILEDKgtstelvrenqklkqhLEEEKQKKHSFLSQRETLLAEAKM- 413
Cdd:COG3206 159 EAYLEQNLELRreeaRKALEFLEEQLPELRKELEEAEAA----------------LEEFRQKNGLVDLSEEAKLLLQQLs 222
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622953243 414 -LKRELERERLVTTALRGELQQLSgSQLHGKSDSPNVYTEKKEIAVLRERLSELERKLTFEQQR 476
Cdd:COG3206 223 eLESQLAEARAELAEAEARLAALR-AQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSAR 285
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
273-587 |
8.23e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.20 E-value: 8.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 273 QKRQQLVRKIHEDELNDMKDYLSQCQQEQESFvdyKSLKENLARCWTLTEAEKMSFETQKTNLATENQYLRISLEKEEKA 352
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEEL---EAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERR 832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 353 LSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSFL-SQRETLLAEAKMLKRELERERLVTTALRGE 431
Cdd:TIGR02168 833 IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNErASLEEALALLRSELEELSEELRELESKRSE 912
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 432 LQQLSGSQlhgksdspnvyteKKEIAVLRERLSELErkLTFEQQRSDLWERLYVEAKDQSGKQET-DGKKKGGRGN-HRA 509
Cdd:TIGR02168 913 LRRELEEL-------------REKLAQLELRLEGLE--VRIDNLQERLSEEYSLTLEEAEALENKiEDDEEEARRRlKRL 977
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 510 KNKSKEtfLGSVkeTFDAM-----KNSTKEFVRHHKEKIKQAKEAVKENLKKFSDSVKSTfrhFKDTTKNIfdekgNKRF 584
Cdd:TIGR02168 978 ENKIKE--LGPV--NLAAIeeyeeLKERYDFLTAQKEDLTEAKETLEEAIEEIDREARER---FKDTFDQV-----NENF 1045
|
...
gi 1622953243 585 GAT 587
Cdd:TIGR02168 1046 QRV 1048
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
284-559 |
1.24e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 284 EDELNDMKDYLsqcQQEQESFVDYKSLKENL--ARCWTLTeAEKMSFETQKTNLATENQYLRISLEKEEKALSSLQEELN 361
Cdd:TIGR02169 193 IDEKRQQLERL---RREREKAERYQALLKEKreYEGYELL-KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 362 KLRE--------------------QIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERE 421
Cdd:TIGR02169 269 EIEQlleelnkkikdlgeeeqlrvKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 422 RLVTTALRGELQQLSGSQLHGKSDspnVYTEKKEIAVLRERLSELERKLtfeqqrSDLWERLYVEAKDQSGKQETDGKKK 501
Cdd:TIGR02169 349 RKRRDKLTEEYAELKEELEDLRAE---LEEVDKEFAETRDELKDYREKL------EKLKREINELKRELDRLQEELQRLS 419
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953243 502 GGRGNHRAKNKSKEtflGSVKEtFDAMKNSTKEFVRHHKEKIKQAKEAVKENLKKFSD 559
Cdd:TIGR02169 420 EELADLNAAIAGIE---AKINE-LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
285-562 |
1.44e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.43 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 285 DELNDMKDYLSQCQQEQESFVD-YKSLKENLARC---WTLTEAEKMSFETQKTNLATENQYLRISLEKEEKALSSLQEEL 360
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEeLEELTAELQELeekLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 361 NKLREQI-----RILEDKGTSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVTTALRGELQQL 435
Cdd:TIGR02168 312 ANLERQLeeleaQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQL 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 436 SGSQlhgksdspnvYTEKKEIAVLRERLSELERKLTFEQQRSDLWERLYVEAKDQSGKQETDGKKKgGRGNHRAKNKSKE 515
Cdd:TIGR02168 392 ELQI----------ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEE-ELEELQEELERLE 460
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1622953243 516 TFLGSVKETFDAMKNSTKEFVRHHKEKIKQAK--EAVKENLKKFSDSVK 562
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDslERLQENLEGFSEGVK 509
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
270-490 |
1.99e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.93 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 270 IQIQKRQQLVRKIHEDELNDMKDYLSQCQQEQESFVDYKSLKENLARcwTLTEAEKMSFETQKTNLATENQYLRIS---L 346
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEE--ELEEAEEELEEAEAELAEAEEALLEAEaelA 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 347 EKEEKALSSLQEELNKLREQIriledkgtstELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVTT 426
Cdd:COG1196 376 EAEEELEELAEELLEALRAAA----------ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE 445
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622953243 427 ALRGELQQLSGSQLHGKSDspnVYTEKKEIAVLRERLSELERKLtfEQQRSDLWERLYVEAKDQ 490
Cdd:COG1196 446 EAAEEEAELEEEEEALLEL---LAELLEEAALLEAALAELLEEL--AEAAARLLLLLEAEADYE 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
292-552 |
3.70e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 292 DYLSQCQQEQESFVDYKSLKENLARCWT-LTEAEKMSFE-TQKTNLATEnqylriSLEKEEKALSSLQEELNKLREQIRI 369
Cdd:TIGR02169 668 FSRSEPAELQRLRERLEGLKRELSSLQSeLRRIENRLDElSQELSDASR------KIGEIEKEIEQLEQEEEKLKERLEE 741
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 370 LEDKGTSTELVRENQKLK-QHLEEEKQKKHSFLSQRETLLAEakmLKRELERERLVTtaLRGELQQLsgsqlhgksdspn 448
Cdd:TIGR02169 742 LEEDLSSLEQEIENVKSElKELEARIEELEEDLHKLEEALND---LEARLSHSRIPE--IQAELSKL------------- 803
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 449 vyteKKEIAVLRERLSELERKLTFEQQRSDLWERLYVEAKDQsgKQETDGKKKGGRGNHRAKNKSKETFLGSVKETFDAM 528
Cdd:TIGR02169 804 ----EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQ--RIDLKEQIKSIEKEIENLNGKKEELEEELEELEAAL 877
|
250 260 270
....*....|....*....|....*....|
gi 1622953243 529 KNSTKEF------VRHHKEKIKQAKEAVKE 552
Cdd:TIGR02169 878 RDLESRLgdlkkeRDELEAQLRELERKIEE 907
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
273-423 |
8.26e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 8.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 273 QKRQQLVRKIHEDELNDMKDYLSQCQQEQESFVDYKSLKENLARcwTLTEAEKMSFETQKTNLATENQYLRISLEKEEKA 352
Cdd:COG4717 370 QEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEE--LLGELEELLEALDEEELEEELEELEEELEELEEE 447
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622953243 353 LSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEkQKKHSFLSQRETLLAEAkmlKRELERERL 423
Cdd:COG4717 448 LEELREELAELEAELEQLEEDGELAELLQELEELKAELREL-AEEWAALKLALELLEEA---REEYREERL 514
|
|
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
108-263 |
8.44e-04 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 43.06 E-value: 8.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 108 TLEPPKLEEIGNQevVIVEEAQSSEDFNMGSSSSSQYTFCQPETErwweklwkiPECIWGWDDQLKHHVPSQLTFQVFSS 187
Cdd:PLN02328 5 TKEPEDPADNVND--VVSEASSPETDLSLSPSQSEQNIENDGQNS---------PETQSPLTELQPSPLPPNTTLDAPVS 73
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622953243 188 QPSDDESSSDETSNQPSPAFRRRRARKKtvstsESEDRLVAEQETEPSkeLSKRQFSSGLNKCVILALVIAISMGF 263
Cdd:PLN02328 74 DSQGDESSSEQQPQNPNSTEPAPPPKKR-----RRRKRFFTEINANPA--FRRHRVRGGLGKEVDVEALIAISVGF 142
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
333-556 |
1.03e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.74 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 333 TNLATENQYLRISLEKEEKALSSLQEELNKLREQIRILEDKgtstelVRENQKLKqhleeEKQKKHSFLSQ-RETLLAEA 411
Cdd:PRK03918 241 EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEK------VKELKELK-----EKAEEYIKLSEfYEEYLDEL 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 412 KMLKRELERERLVTTALRGELQQLSgsqlhgksdspnvyTEKKEIAVLRERLSELERKLtfeqQRSDLWERLYVEAKDQS 491
Cdd:PRK03918 310 REIEKRLSRLEEEINGIEERIKELE--------------EKEERLEELKKKLKELEKRL----EELEERHELYEEAKAKK 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622953243 492 GKQETDGKKKGGRGNHRAKNKSKEtfLGSVKETFDAMKNSTKEFVRHHKEKIKQAKEAVKEnLKK 556
Cdd:PRK03918 372 EELERLKKRLTGLTPEKLEKELEE--LEKAKEEIEEEISKITARIGELKKEIKELKKAIEE-LKK 433
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
271-471 |
1.08e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.74 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 271 QIQKRQQLVRKiHEDELNDMKDYLSQCQQEqesfvdYKSLKENLARC-WTLTEAEKMSFETQKTNLATENQYLRIS--LE 347
Cdd:TIGR02168 783 EIEELEAQIEQ-LKEELKALREALDELRAE------LTLLNEEAANLrERLESLERRIAATERRLEDLEEQIEELSedIE 855
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 348 KEEKALSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSflSQRETLLAEAKMLKRELERERLVTTA 427
Cdd:TIGR02168 856 SLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELE--SKRSELRRELEELREKLAQLELRLEG 933
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1622953243 428 LRGELQQLSGS-----QLHGKSDSPNVYTEKKEIAVLRERLSELERKLT 471
Cdd:TIGR02168 934 LEVRIDNLQERlseeySLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
325-475 |
1.51e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 325 KMSFETQKTNLATENQYLRISLEKEEKALSSLQEELNKLREQIRIL----EDKGTSTELVRENQKLKQhLEEEKQKKHSF 400
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVdlseEAKLLLQQLSELESQLAE-ARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 401 LSQRETLLAEAKMLKRELERERLVTtALRGELQQLSgSQLHGKS-----DSPNVYTEKKEIAVLRERLSELERKLTFEQQ 475
Cdd:COG3206 242 LAALRAQLGSGPDALPELLQSPVIQ-QLRAQLAELE-AELAELSarytpNHPDVIALRAQIAALRAQLQQEAQRILASLE 319
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
353-489 |
2.97e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 353 LSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKM---------LKRELERERL 423
Cdd:COG4913 237 LERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELeelraelarLEAELERLEA 316
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622953243 424 VTTALRGELQQLsgSQLHGKSDSPNVYTEKKEIAVLRERLSELERKLT-FEQQRSDLWERLYVEAKD 489
Cdd:COG4913 317 RLDALREELDEL--EAQIRGNGGDRLEQLEREIERLERELEERERRRArLEALLAALGLPLPASAEE 381
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
340-490 |
2.97e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.08 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 340 QYLRISLEKEEK-------ALSSLQEELNKLREQIRILEDKgtSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAK 412
Cdd:COG1196 214 RYRELKEELKELeaellllKLRELEAELEELEAELEELEAE--LEELEAELAELEAELEELRLELEELELELEEAQAEEY 291
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953243 413 MLKRELERERLVTTALRGELQQLSGSQLHgksdspnvytEKKEIAVLRERLSELERKLTFEQQRSDLWERLYVEAKDQ 490
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRELEERLEE----------LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
271-477 |
3.36e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.22 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 271 QIQKRQQLVRKI---HEDELNDMKDYLSQCQQEQESFV-DYKSLKENLARcwtLTEA-EKMSFETQKTNLATENQYLrIS 345
Cdd:COG5022 883 QLQELKIDVKSIsslKLVNLELESEIIELKKSLSSDLIeNLEFKTELIAR---LKKLlNNIDLEEGPSIEYVKLPEL-NK 958
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 346 LEKEEKALSSLQEELNKLREQiriledkgtSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKrELERERLVT 425
Cdd:COG5022 959 LHEVESKLKETSEEYEDLLKK---------STILVREGNKANSELKNFKKELAELSKQYGALQESTKQLK-ELPVEVAEL 1028
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 426 TAL-------RGELQQLSGSQ-LHGKSDSPNVYTEKKEIAVLRERLSELERKLTFEQQRS 477
Cdd:COG5022 1029 QSAskiisseSTELSILKPLQkLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLES 1088
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
337-501 |
3.82e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.88 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 337 TENQYLR--ISLEKEEKALS--SLQEELNKLrEQIRILEDKgtsTELVRENQKLKQhLEEEKQKKHSFLSQRETLLAEAK 412
Cdd:pfam17380 266 TENEFLNqlLHIVQHQKAVSerQQQEKFEKM-EQERLRQEK---EEKAREVERRRK-LEEAEKARQAEMDRQAAIYAEQE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 413 MLKRELERE--RLVTTALRGELQQLsgsqlhgksdspnvytEKKEIAVLRERLSELERkLTFEQQRSDLWERLYVEAKDQ 490
Cdd:pfam17380 341 RMAMEREREleRIRQEERKRELERI----------------RQEEIAMEISRMRELER-LQMERQQKNERVRQELEAARK 403
|
170
....*....|.
gi 1622953243 491 SGKQETDGKKK 501
Cdd:pfam17380 404 VKILEEERQRK 414
|
|
| GvpP |
COG4980 |
Gas vesicle protein YhaH [General function prediction only]; |
520-578 |
4.00e-03 |
|
Gas vesicle protein YhaH [General function prediction only];
Pssm-ID: 444004 [Multi-domain] Cd Length: 106 Bit Score: 37.64 E-value: 4.00e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622953243 520 SVKETFDAMKNSTKEFVRHHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDE 578
Cdd:COG4980 35 KLKDKADDLKDKAEDLKDELKEKASELSEEAKEKLDELIEEIKEKIEELKEEVEPKIEE 93
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
274-589 |
5.27e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 274 KRQQLVRKIHEDELNDMKDYLSQCQQEQESfvdyksLKENLARCWTLTEAEKMSFETQKTNLATENQYLRISLEKEEKAL 353
Cdd:PTZ00121 1546 KKADELKKAEELKKAEEKKKAEEAKKAEED------KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 354 SSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVTTALRGELQ 433
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 434 qlsgsqlhgksdspnvytEKKEIAVLRERLSELERKLtfEQQRSDlwERLYVEAKDQSGKQETDGKKKGGRGNHRAKNKS 513
Cdd:PTZ00121 1700 ------------------EAKKAEELKKKEAEEKKKA--EELKKA--EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK 1757
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622953243 514 KETFLGsvketfdamKNSTKEFVRHHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFD--EKGNKRFGATKE 589
Cdd:PTZ00121 1758 KIAHLK---------KEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEggKEGNLVINDSKE 1826
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
273-471 |
5.96e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 40.17 E-value: 5.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 273 QKRQQLvrKIHEDELNDMKdylSQCQQEQE--SFVDYKSLKENLARCWTLTEAEKMSFETQKTNLATENQYLRISLEKEE 350
Cdd:PRK10246 465 EMRQRY--KEKTQQLADVK---TICEQEARikDLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLDALEKEV 539
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 351 KAL----SSLQEELNKLREQIRILEDKGTSteLVRENQKLKQHLE-----------------------EEKQKKHSFLSQ 403
Cdd:PRK10246 540 KKLgeegAALRGQLDALTKQLQRDESEAQS--LRQEEQALTQQWQavcaslnitlqpqddiqpwldaqEEHERQLRLLSQ 617
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 404 RETL---LAEAKMLKRELERERLVT-TALRGELQQLS---------GSQLHGKSDSPNVYTEKK-EIAVLRERLSELERK 469
Cdd:PRK10246 618 RHELqgqIAAHNQQIIQYQQQIEQRqQQLLTALAGYAltlpqedeeASWLATRQQEAQSWQQRQnELTALQNRIQQLTPL 697
|
..
gi 1622953243 470 LT 471
Cdd:PRK10246 698 LE 699
|
|
| GAS |
pfam13851 |
Growth-arrest specific micro-tubule binding; This family is the highly conserved central ... |
281-409 |
6.36e-03 |
|
Growth-arrest specific micro-tubule binding; This family is the highly conserved central region of a number of metazoan proteins referred to as growth-arrest proteins. In mouse, Gas8 is predominantly a testicular protein, whose expression is developmentally regulated during puberty and spermatogenesis. In humans, it is absent in infertile males who lack the ability to generate gametes. The localization of Gas8 in the motility apparatus of post-meiotic gametocytes and mature spermatozoa, together with the detection of Gas8 also in cilia at the apical surfaces of epithelial cells lining the pulmonary bronchi and Fallopian tubes suggests that the Gas8 protein may have a role in the functioning of motile cellular appendages. Gas8 is a microtubule-binding protein localized to regions of dynein regulation in mammalian cells.
Pssm-ID: 464001 [Multi-domain] Cd Length: 200 Bit Score: 38.73 E-value: 6.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 281 KIHEDELNDMKDYLSQCQQEQESfvDYKSLKENLArcwtltEAEKMSFETQKT--NLATENQYLRISLEKEEKALSSLQE 358
Cdd:pfam13851 4 KNHEKAFNEIKNYYNDITRNNLE--LIKSLKEEIA------ELKKKEERNEKLmsEIQQENKRLTEPLQKAQEEVEELRK 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1622953243 359 EL---NKLREQIRILEDKGTSTElvRENQKLKQHLEEEKQKKHSFLSQRETLLA 409
Cdd:pfam13851 76 QLenyEKDKQSLKNLKARLKVLE--KELKDLKWEHEVLEQRFEKVERERDELYD 127
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
343-490 |
6.44e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.31 E-value: 6.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 343 RISLEKEEKALSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKkhsflsQRETLLAEAKMLKRELERER 422
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEE------RLEEELEEEALEEQLEAERE 735
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 423 LVTTALRGELQQLSGSQLHGKSDSPNVYTEKKEIAVLRERLSEL---------------ERKLTFEQQRSDLwerlyVEA 487
Cdd:COG1196 736 ELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALgpvnllaieeyeeleERYDFLSEQREDL-----EEA 810
|
...
gi 1622953243 488 KDQ 490
Cdd:COG1196 811 RET 813
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
272-486 |
6.55e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 39.62 E-value: 6.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 272 IQKRQQLVRKIHEDELND----MKDYLSQCQQEQESFVD-YKSLKENlARcwtlTEAEKMSFE-------TQKTNLATEn 339
Cdd:smart00787 79 ISEGRDLFKEIEEETLINnpplFKEYFSASPDVKLLMDKqFQLVKTF-AR----LEAKKMWYEwrmklleGLKEGLDEN- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 340 qylRISLEKEEKALSSLQEELNKLREQIRILEDkgtstELVRENQKLKQHLEEEKQKKHSFLSQretLLAEAKMLKRELE 419
Cdd:smart00787 153 ---LEGLKEDYKLLMKELELLNSIKPKLRDRKD-----ALEEELRQLKQLEDELEDCDPTELDR---AKEKLKKLLQEIM 221
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622953243 420 RERLVTTALRGELQQLSGsqlhgksdspNVYTEKKEIAVLRERLSELERKLtfeqQRSDLWERLYVE 486
Cdd:smart00787 222 IKVKKLEELEEELQELES----------KIEDLTNKKSELNTEIAEAEKKL----EQCRGFTFKEIE 274
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
346-488 |
7.43e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.90 E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 346 LEKEEKALSSLQEELNKLREQIRILEDKG-TSTELVRENQKLKQHLEEEK-----QKKHSFL-SQRETLLA---EAKMLK 415
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELdALQERREALQRLAEYSWDEIdvasaEREIAELeAELERLDAssdDLAALE 691
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622953243 416 RELERERLVTTALRGELQQLSGSQLhgksdspnvyTEKKEIAVLRERLSELERKLTFEQQRSDLWERLYVEAK 488
Cdd:COG4913 692 EQLEELEAELEELEEELDELKGEIG----------RLEKELEQAEEELDELQDRLEAAEDLARLELRALLEER 754
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
345-501 |
8.10e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.36 E-value: 8.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 345 SLEKEEKALSSLQEELNKLREQIRILEDKgtSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLV 424
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKE--EKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 425 TTALRGEL-QQLSGSQLHGKSDSPNV-------------------YTE--KKEIAVLRERLSELERKLTFEQQRSDLWER 482
Cdd:COG4942 99 LEAQKEELaELLRALYRLGRQPPLALllspedfldavrrlqylkyLAParREQAEELRADLAELAALRAELEAERAELEA 178
|
170
....*....|....*....
gi 1622953243 483 LYVEAKDQSGKQETDGKKK 501
Cdd:COG4942 179 LLAELEEERAALEALKAER 197
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
251-412 |
8.49e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 39.69 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 251 VILALVIAISMGFghFYGtiQIQKRQQLVRKIHEDELNDMKDYLSQCQQEQESFVDYKSLKENLARCWTLTEAEKMSFET 330
Cdd:PRK12705 8 VILLLLIGLLLGV--LVV--LLKKRQRLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 331 QKTNLATENQYLRIS--------LEKEEKALSSLQEELNKLREQIR-ILEDKGTSTELVRENQ---KLKQHLEEEKQKKH 398
Cdd:PRK12705 84 ERLVQKEEQLDARAEkldnlenqLEEREKALSARELELEELEKQLDnELYRVAGLTPEQARKLllkLLDAELEEEKAQRV 163
|
170
....*....|....
gi 1622953243 399 SFLSQRETLLAEAK 412
Cdd:PRK12705 164 KKIEEEADLEAERK 177
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
271-440 |
8.82e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 39.12 E-value: 8.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 271 QIQKRQQLVRKIHEdELNDMKDYLSQCQQEQESF-VDYKSLKENLARcwtlTEAEKMSFETQKTNLATENQYLRISLEKE 349
Cdd:COG4372 74 ELEQLEEELEELNE-QLQAAQAELAQAQEELESLqEEAEELQEELEE----LQKERQDLEQQRKQLEAQIAELQSEIAER 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622953243 350 EKALSSLQEELNKLREQIRILEDKGTSTELVRENQKLKQHLEEEKQKKHSFLSQRETLLAEAKMLKRELERERLVTTALR 429
Cdd:COG4372 149 EEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLE 228
|
170
....*....|.
gi 1622953243 430 GELQQLSGSQL 440
Cdd:COG4372 229 AKLGLALSALL 239
|
|
| |
