|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
214-278 |
2.33e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.36 E-value: 2.33e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 278
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
8.25e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 8.25e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
214-279 |
6.74e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.06 E-value: 6.74e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 214 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 279
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
3.49e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 3.49e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
988-1885 |
1.60e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.20 E-value: 1.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 988 QELKAGYEKA--TSETKTKHEEILQNLRKTLLDTeDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMS 1065
Cdd:TIGR02168 155 EERRAIFEEAagISKYKERRKETERKLERTRENL-DRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLR 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1066 -----EELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQ 1140
Cdd:TIGR02168 234 leelrEELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAN 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1141 EHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLIT 1220
Cdd:TIGR02168 314 LERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1221 EnfilakdkddiIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVErdnalqnnrdlqlETDMLL 1300
Cdd:TIGR02168 394 Q-----------IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELE-------------ELEEEL 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1301 HDQEKLNASLQAALqvkqllrseaSGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEeikarravtdseciqllhEK 1380
Cdd:TIGR02168 450 EELQEELERLEEAL----------EELREELEEAEQALDAAERELAQLQARLDSLERLQE------------------NL 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1381 ETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQK----MTKLKKHQDSLLKEKSA 1456
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKaiafLKQNELGRVTFLPLDSI 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1457 LETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQEnmkLLGNI-------DALkkELQERKNENQELVASKCDL-- 1527
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY---LLGGVlvvddldNAL--ELAKKLRPGYRIVTLDGDLvr 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1528 ------------SLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTccsekniLLRDSLNLQEECQKLSEEIQEMQQSLI 1595
Cdd:TIGR02168 657 pggvitggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAE-------LRKELEELEEELEQLRKELEELSRQIS 729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1596 LEQE---ARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLA 1672
Cdd:TIGR02168 730 ALRKdlaRLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1673 AHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESY 1752
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1753 FILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLED 1832
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEE 969
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|...
gi 1622847178 1833 TKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1885
Cdd:TIGR02168 970 ARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
729-1520 |
2.38e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 2.38e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 729 SQLKATEEkllDLDALQKASSEGKSEMEKLRQQLEAAEK------QIKHLEIEKNAESSKasSITRELQGRELKLTNLQE 802
Cdd:TIGR02168 179 RKLERTRE---NLDRLEDILNELERQLKSLERQAEKAERykelkaELRELELALLVLRLE--ELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 803 NLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREE 882
Cdd:TIGR02168 254 ELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 883 QLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEdmTLKAEQSQQeaaekh 962
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA--SLNNEIERL------ 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 963 eeekkelERKLSDLEKKMEtshNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRK 1042
Cdd:TIGR02168 406 -------EARLERLEDRRE---RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQ 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1043 QADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGsLLSKLVELEAKI-----ALLQGDQQKLWSVN 1117
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILG-VLSELISVDEGYeaaieAALGGRLQAVVVEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1118 etlnlekekfLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEEL--QLSKD 1195
Cdd:TIGR02168 555 ----------LNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAlsYLLGG 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1196 ALIAKTEKDqeerdhlADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALV---QDIEDLTAEKKSALEKLSNLD 1272
Cdd:TIGR02168 625 VLVVDDLDN-------ALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILerrREIEELEEKIEELEEKIAELE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1273 NTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAalqvkqlLRSEASGLRAQLDDASKALRKAELETMQLQATN 1352
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR-------LEAEVEQLEERIAQLSKELTELEAEIEELEERL 770
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1353 TSLTKLLEEIKARRAVTDSECIQLlheKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMsLNEKITYLTSE 1432
Cdd:TIGR02168 771 EEAEEELAEAEAEIEELEAQIEQL---KEELKALREALDELRAELTLLNEEAANLRERLESLERRIAA-TERRLEDLEEQ 846
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1433 KEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQE 1512
Cdd:TIGR02168 847 IEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQ 926
|
....*...
gi 1622847178 1513 RKNENQEL 1520
Cdd:TIGR02168 927 LELRLEGL 934
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
669-1458 |
4.09e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 91.66 E-value: 4.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 669 KEKENSLEAIKSKLDKAEDQhLVEMEETLNKLQ------------EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 736
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLErqaekaerykelKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 737 KLLDLDA-----------LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLS 805
Cdd:TIGR02168 254 ELEELTAelqeleekleeLRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 806 EVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLI 885
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 886 KAKEKLENDIAEIMKMSGDNSSQLTKMndELRLKERYVEELQLKLTKANENASFLQKSIEdmtlKAEQSQQEAAEKHEEE 965
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKELQA--ELEELEEELEELQEELERLEEALEELREELE----EAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 966 KKELERKLSDLEKKMETSHNQCQELK-------------------AGYEKA------------TSETKTKHEEILQNLRK 1014
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKALLKnqsglsgilgvlselisvdEGYEAAieaalggrlqavVVENLNAAKKAIAFLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1015 TLLDT----EDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSekqllsqegndlkLENG 1090
Cdd:TIGR02168 568 NELGRvtflPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDD-------------LDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1091 SLLSKLVELEAKIALLQGDQ-QKLWSVNETLNLEKEKFLEEKQDAEKHYEQehlnKEVLAVEREKLLKEINVAQEELLKI 1169
Cdd:TIGR02168 635 LELAKKLRPGYRIVTLDGDLvRPGGVITGGSAKTNSSILERRREIEELEEK----IEELEEKIAELEKALAELRKELEEL 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1170 NMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKL----------ITENFILAKDKDDIIQKLQSS 1239
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELeaeieeleerLEEAEEELAEAEAEIEELEAQ 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1240 YEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNAS---------- 1309
Cdd:TIGR02168 791 IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEieeleeliee 870
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1310 ----LQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDsecIQLLHEKETLAA 1385
Cdd:TIGR02168 871 leseLEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE---VRIDNLQERLSE 947
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847178 1386 SERRLLAEKEELlsenriiTEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALE 1458
Cdd:TIGR02168 948 EYSLTLEEAEAL-------ENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLT 1013
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
405-1176 |
1.95e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.26 E-value: 1.95e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 405 ELEAKMDQLRTMVEAADREKvELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEK-SRIMELEKD 483
Cdd:TIGR02168 197 ELERQLKSLERQAEKAERYK-ELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELeEKLEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 484 LALRVQEVAELRRRLesnkpagdvdmsLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEkL 563
Cdd:TIGR02168 276 VSELEEEIEELQKEL------------YALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAE-L 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 564 SKENESLKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAEL------KTQIEKMRLDYQH 637
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRSKVAQLELQIASLNNEIerlearLERLEDRRERLQQ 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 638 EIE-NLQNQQDSERSAHAKEMEALRAKLMKVIKEKENsLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAK 716
Cdd:TIGR02168 422 EIEeLLKKLEEAELKELQAELEELEEELEELQEELER-LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 717 cneqtkvIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAA-EKQIKHLEIEKNAESSKA-SSITRELQGR- 793
Cdd:TIGR02168 501 -------LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlGGRLQAVVVENLNAAKKAiAFLKQNELGRv 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 794 ---ELKLTNLQENLSEVSQVKDTLEKELQILKE--KFAEASEEAVS-------VQRSMQETVNKLHQKEEQFNMLSSD-- 859
Cdd:TIGR02168 574 tflPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgd 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 860 -------------------------LEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMND 914
Cdd:TIGR02168 654 lvrpggvitggsaktnssilerrreIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 915 ELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKkelerklsDLEKKMETSHNQCQELKAGY 994
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE--------ELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 995 EKAtsetktkhEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAK----SLTYLLTSAKKEIELMSEELRG 1070
Cdd:TIGR02168 806 DEL--------RAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSedieSLAAEIEELEELIEELESELEA 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1071 LKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKF-LEEKQDAEKHYEQEHLNKEVLA 1149
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLeVRIDNLQERLSEEYSLTLEEAE 957
|
810 820
....*....|....*....|....*..
gi 1622847178 1150 VEREKLLKEINVAQEELLKINMENDSL 1176
Cdd:TIGR02168 958 ALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
585-1342 |
7.21e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.34 E-value: 7.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 585 IALWKSKLETAIASHQQAMEELKVSFSKgLGTETAEFAELKTQIEKMRLdYQHEIENLQNQQDSERSAHAKEMEALRAKL 664
Cdd:TIGR02168 227 LALLVLRLEELREELEELQEELKEAEEE-LEELTAELQELEEKLEELRL-EVSELEEEIEELQKELYALANEISRLEQQK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 665 MkVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA- 743
Cdd:TIGR02168 305 Q-ILRERLANLERQLEELEAQLEELESKLDELAEELAELE---EKLEELKEELESLEAELEELEAELEELESRLEELEEq 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 744 ---LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQgrELKLTNLQENLSEVSQVKDTLEKELQI 820
Cdd:TIGR02168 381 letLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAELEELEEELEELQEELER 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 821 LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREE------QLIKAKEKLEND 894
Cdd:TIGR02168 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGilgvlsELISVDEGYEAA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 895 IAEIMkmsGDNSSQLTKMNDElrlkeRYVEELQLKLTKANENASFLQ-KSIEDMTLKAEQSQQEAAEKHEEEKKELERKL 973
Cdd:TIGR02168 539 IEAAL---GGRLQAVVVENLN-----AAKKAIAFLKQNELGRVTFLPlDSIKGTEIQGNDREILKNIEGFLGVAKDLVKF 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 974 SDLEKK--------------METSHNQCQELKAGY---------------------EKATSETKTKHEeiLQNLRKTLLD 1018
Cdd:TIGR02168 611 DPKLRKalsyllggvlvvddLDNALELAKKLRPGYrivtldgdlvrpggvitggsaKTNSSILERRRE--IEELEEKIEE 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1019 TEDKLKGAREENSGLLQELEELRKQADKAK----SLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLS 1094
Cdd:TIGR02168 689 LEEKIAELEKALAELRKELEELEEELEQLRkeleELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE 768
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1095 KLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMEND 1174
Cdd:TIGR02168 769 RLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE 848
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1175 SLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDI---IQKLQSSYEELVKDQKALV 1251
Cdd:TIGR02168 849 ELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELeskRSELRRELEELREKLAQLE 928
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1252 QDIEDLTAEKKSALEKLSNLdntciaLKVERDNALQNNRDLQLETDMLLHDQEKLNASLQ-------AALQVKQLLRSEA 1324
Cdd:TIGR02168 929 LRLEGLEVRIDNLQERLSEE------YSLTLEEAEALENKIEDDEEEARRRLKRLENKIKelgpvnlAAIEEYEELKERY 1002
|
810
....*....|....*...
gi 1622847178 1325 SGLRAQLDDASKALRKAE 1342
Cdd:TIGR02168 1003 DFLTAQKEDLTEAKETLE 1020
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
794-1678 |
7.65e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.34 E-value: 7.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 794 ELKLTNLQENLSEVSQVKDTLEKELQILK------EKFAEASEEAVSVQRSMQetVNKLHQKEEQFNMLSSDLEKLRENL 867
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLErqaekaERYKELKAELRELELALL--VLRLEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 868 AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKmsgdnssqltkmndELRLKERYVEELQLKLTKANENASFLQKSIEdm 947
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQK--------------ELYALANEISRLEQQKQILRERLANLERQLE-- 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 948 tlkaeqsqqeaaekheeekkelerklsdlekkmetshnqcqelkagyekatsetktKHEEILQNLRKTLLDTEDKLKGAR 1027
Cdd:TIGR02168 320 --------------------------------------------------------ELEAQLEELESKLDELAEELAELE 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1028 EENSGLLQELEELRKQADKAKSLTYLLTSAKKEIElmsEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQ 1107
Cdd:TIGR02168 344 EKLEELKEELESLEAELEELEAELEELESRLEELE---EQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQ 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1108 GDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLnkEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLI 1187
Cdd:TIGR02168 421 QEIEELLKKLEEAELKELQAELEELEEELEELQEEL--ERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQ 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1188 EELQlSKDALIAKTEKDQEERDHLADQIKKLIT--ENFILAKDKD--DIIQKLqssyeeLVKDQKALVQDIEDLtaeKKS 1263
Cdd:TIGR02168 499 ENLE-GFSEGVKALLKNQSGLSGILGVLSELISvdEGYEAAIEAAlgGRLQAV------VVENLNAAKKAIAFL---KQN 568
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1264 ALEKLSNLDNTCI---ALKVERDNALQNNRDLQLETDMLLHDQEKLNA-------------SLQAALQVKQLLRSE---- 1323
Cdd:TIGR02168 569 ELGRVTFLPLDSIkgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvdDLDNALELAKKLRPGyriv 648
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1324 --------ASGLRAQLDDASKAL---RKAELEtmQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLaaseRRLLA 1392
Cdd:TIGR02168 649 tldgdlvrPGGVITGGSAKTNSSileRRREIE--ELEEKIEELEEKIAELEKALAELRKELEELEEELEQL----RKELE 722
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1393 EKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSI 1472
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR 802
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1473 KAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAK 1552
Cdd:TIGR02168 803 EALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNER 882
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1553 ENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSL--ILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELR 1630
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLaqLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENK 962
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 1631 VCTEELQSEKFV-LLQEKTK--------SEQEVAEIIEEKELLTAEAAQLAAHIKTL 1678
Cdd:TIGR02168 963 IEDDEEEARRRLkRLENKIKelgpvnlaAIEEYEELKERYDFLTAQKEDLTEAKETL 1019
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
353-956 |
1.43e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.18 E-value: 1.43e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 353 LQEALKEKQQHIEQLLAERDLERAEVAKATshvgEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADrekvellNQLE 432
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELE----AELEELESRLEELEEQLETLRSKVAQLELQIASLN-------NEIE 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 433 EEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKSR-IMELEKDLALRVQEVAELRRRLESNKPAgdVDMSL 511
Cdd:TIGR02168 404 RLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEeLEELQEELERLEEALEELREELEEAEQA--LDAAE 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 512 SLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKE--IKALYTATEKLSKENES-LKSKLEH-----ANKENSD 583
Cdd:TIGR02168 482 RELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILgvLSELISVDEGYEAAIEAaLGGRLQAvvvenLNAAKKA 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 584 VIALWKSK--------LETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKM---RLDYQHEIENLQNQQDSERSA 652
Cdd:TIGR02168 562 IAFLKQNElgrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAlsyLLGGVLVVDDLDNALELAKKL 641
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 653 HAKEM------EALRAK--LMKVIKEKENSLEAIKSKLDKAEDQhlveMEETLNKLQEAEIKVKELEVLQAKCNEQTKVI 724
Cdd:TIGR02168 642 RPGYRivtldgDLVRPGgvITGGSAKTNSSILERRREIEELEEK----IEELEEKIAELEKALAELRKELEELEEELEQL 717
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 725 DnftsqlKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL 804
Cdd:TIGR02168 718 R------KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI 791
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 805 SEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQL 884
Cdd:TIGR02168 792 EQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEEL 871
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 885 IKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 956
Cdd:TIGR02168 872 ESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQE 943
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
667-1274 |
1.72e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.06 E-value: 1.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 667 VIKEKENSLEAIKSKLDKAE-------DQHLVEMEETLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKL- 738
Cdd:COG1196 194 ILGELERQLEPLERQAEKAEryrelkeELKELEAELLLLKLRELE---AELEELEAELEELEAELEELEAELAELEAELe 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 739 ---LDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLE 815
Cdd:COG1196 271 elrLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 816 KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDI 895
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEAL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 896 AEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSD 975
Cdd:COG1196 431 AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 976 LEKKMETS----HNQCQELKAGYEKATSETKTKHEEILQN-LRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSL 1050
Cdd:COG1196 511 KAALLLAGlrglAGAVAVLIGVEAAYEAALEAALAAALQNiVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAA 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1051 TYLLTSAKKEIELMSEELRGLKSEKQ-----LLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKE 1125
Cdd:COG1196 591 ALARGAIGAAVDLVASDLREADARYYvlgdtLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1126 KFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSkdaliaktEKDQ 1205
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL--------EELL 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1206 EERDHLADQIKKLITENFILAKDKDDIiQKLQSS--------------YEELVKDQKALVQDIEDLTAEKKSALEKLSNL 1271
Cdd:COG1196 743 EEEELLEEEALEELPEPPDLEELEREL-ERLEREiealgpvnllaieeYEELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
...
gi 1622847178 1272 DNT 1274
Cdd:COG1196 822 DRE 824
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1334-2054 |
1.05e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.49 E-value: 1.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1334 ASKALR----KAELETMQLqatnTSLTKLLEEIKARRAVTDSECIQLLHEKETLAaserRLLAEKEELLSENRIITEKLH 1409
Cdd:TIGR02168 209 AEKAERykelKAELRELEL----ALLVLRLEELREELEELQEELKEAEEELEELT----AELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1410 KCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESA-- 1487
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAel 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1488 NRRIIVQENMKLLgnIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTccSEKN 1567
Cdd:TIGR02168 361 EELEAELEELESR--LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1568 ILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKE---SSLYENNQLHGRMVLLEQEVEELRvctEELQSEKFVLL 1644
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEEALEELREELEEAEQaldAAERELAQLQARLDSLERLQENLE---GFSEGVKALLK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1645 QEKTKSE--QEVAEIIE-EKELLTAEAAQLAAHIKTL--------KSDFAALSKSK--------------AELQELHSCL 1699
Cdd:TIGR02168 514 NQSGLSGilGVLSELISvDEGYEAAIEAALGGRLQAVvvenlnaaKKAIAFLKQNElgrvtflpldsikgTEIQGNDREI 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1700 TKILDDLQ--LNHEVTLAEKAQ-----------VMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEisqlAKTN 1766
Cdd:TIGR02168 594 LKNIEGFLgvAKDLVKFDPKLRkalsyllggvlVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGS----AKTN 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1767 ShisaNLLESQNENRTLRKDKNKLTLKIRELET-----LQSFTAAQTA-EDAMQIMEQMTKEKTETLASLEDTKQTNAKL 1840
Cdd:TIGR02168 670 S----SILERRREIEELEEKIEELEEKIAELEKalaelRKELEELEEElEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1841 QNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKL 1920
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA---ANL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1921 EEERSVLNNQLLEMKKSlpsntlreskfIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLhsv 2000
Cdd:TIGR02168 823 RERLESLERRIAATERR-----------LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEA--- 888
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 2001 VQTLESDKVKLELKVKNLELQLKENKRQLSSSsgnTDTQADEDERAQESQQMID 2054
Cdd:TIGR02168 889 LALLRSELEELSEELRELESKRSELRRELEEL---REKLAQLELRLEGLEVRID 939
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1034-1883 |
2.22e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 79.34 E-value: 2.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1034 LQELEELRKQADKAKSLtylltsakkeIELMSEELRGLKSEKqllsqegnDLKLENGSLLSKLVELEAKIALLQgdqqkl 1113
Cdd:TIGR02169 176 LEELEEVEENIERLDLI----------IDEKRQQLERLRRER--------EKAERYQALLKEKREYEGYELLKE------ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1114 wsvNETLNLEKEKFLEEKQDAEKHYEQ-----EHLNKEVlaVEREKLLKEIN-----VAQEELLKINMENDSLQASKVSM 1183
Cdd:TIGR02169 232 ---KEALERQKEAIERQLASLEEELEKlteeiSELEKRL--EEIEQLLEELNkkikdLGEEEQLRVKEKIGELEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1184 QTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDdiiqKLQSSYEELVKDQKALVQDIEDLTAEKKS 1263
Cdd:TIGR02169 307 ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRD----KLTEEYAELKEELEDLRAELEEVDKEFAE 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1264 ALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNA----------SLQAALQVKQL----LRSEASGLRA 1329
Cdd:TIGR02169 383 TRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAaiagieakinELEEEKEDKALeikkQEWKLEQLAA 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1330 QLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSenriITEKLH 1409
Cdd:TIGR02169 463 DLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGS----VGERYA 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1410 KCSEEAA---------HTEMSLNEKITYLtseKEMASQKMTKL---KKHQDSLLKEKSALETQNGVLLaerensikaigD 1477
Cdd:TIGR02169 539 TAIEVAAgnrlnnvvvEDDAVAKEAIELL---KRRKAGRATFLplnKMRDERRDLSILSEDGVIGFAV-----------D 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1478 LKRqCDQESANRRIIVQENMKLLGNIDALKKELQERKnenqeLVASKCDL----------SLMLKEAQNAKKNLEKEHTH 1547
Cdd:TIGR02169 605 LVE-FDPKYEPAFKYVFGDTLVVEDIEAARRLMGKYR-----MVTLEGELfeksgamtggSRAPRGGILFSRSEPAELQR 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1548 ILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQ--QSLILEQEARAKEKesslyennqlhgrmvlLEQE 1625
Cdd:TIGR02169 679 LRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEkeIEQLEQEEEKLKER----------------LEEL 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1626 VEELRVCTEELQSEKfvllQEKTKSEQEVAEIIEEKELLTAEAAQLAAH-----IKTLKSDFAALSKSKAELQELHSCLT 1700
Cdd:TIGR02169 743 EEDLSSLEQEIENVK----SELKELEARIEELEEDLHKLEEALNDLEARlshsrIPEIQAELSKLEEEVSRIEARLREIE 818
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1701 KILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNEN 1780
Cdd:TIGR02169 819 QKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL 898
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1781 RTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIME-----QMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNV 1855
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEiedpkGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAI 978
|
890 900 910
....*....|....*....|....*....|....*...
gi 1622847178 1856 EE----------LNKSKELLTVENQKMEEFRKEIETLK 1883
Cdd:TIGR02169 979 QEyeevlkrldeLKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
357-1139 |
4.26e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.56 E-value: 4.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 357 LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHdqhvLELEAKMDQLRTMVEAADREKVELLNQLEEEKR 436
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV----SELEEEIEELQKELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 437 KVEDLQFRVEEESITKGDLEQKSQisEDPENVATVSEKsrIMELEKDLALRVQEVAELRRRLE--SNKPAGDVDMSLSLL 514
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLD--ELAEELAELEEK--LEELKEELESLEAELEELEAELEelESRLEELEEQLETLR 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 515 QEISSLQEKLEVTRTDHQR---EITSLKEHFG-AREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIAlwks 590
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERleaRLERLEDRRErLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE---- 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 591 KLETAIASHQQAMEELkVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQD------------SERSAHAKEME 658
Cdd:TIGR02168 462 ALEELREELEEAEQAL-DAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGlsgilgvlseliSVDEGYEAAIE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 659 -ALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEK 737
Cdd:TIGR02168 541 aALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 738 LLDL--------DALQKA--------------------------SSEGKSEMEKLRQQLEAAEKQIKHLEieknaesSKA 783
Cdd:TIGR02168 621 LLGGvlvvddldNALELAkklrpgyrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKIEELE-------EKI 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 784 SSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKL 863
Cdd:TIGR02168 694 AELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEA 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 864 RENLAEMEAKfrekdereeqlikaKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKS 943
Cdd:TIGR02168 774 EEELAEAEAE--------------IEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 944 IEDMTLKAEQsqqeaaekheeekkeLERKLSDLEKKMETSHNQCQELKAGYEKATSEtKTKHEEILQNLRKTLLDTEDKL 1023
Cdd:TIGR02168 840 LEDLEEQIEE---------------LSEDIESLAAEIEELEELIEELESELEALLNE-RASLEEALALLRSELEELSEEL 903
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1024 KGAREENSGLLQELEELRKQADKAKsltylltSAKKEIELMSEELRGLKSEKQLLSQEgNDLKLENGsLLSKLVELEAKI 1103
Cdd:TIGR02168 904 RELESKRSELRRELEELREKLAQLE-------LRLEGLEVRIDNLQERLSEEYSLTLE-EAEALENK-IEDDEEEARRRL 974
|
810 820 830
....*....|....*....|....*....|....*.
gi 1622847178 1104 ALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYE 1139
Cdd:TIGR02168 975 KRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKE 1010
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1233-2025 |
4.76e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.17 E-value: 4.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1233 IQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDntciALKVERDNALQnnrDLQLETDMLLHDQEKLNASLQA 1312
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELR----LEVSELEEEIE---ELQKELYALANEISRLEQQKQI 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1313 ALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKArravtdseciQLLHEKETLAASERRLLA 1392
Cdd:TIGR02168 307 LRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA----------ELEELEAELEELESRLEE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1393 EKEELLSENRIITEKLHKcseeaahtEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSaletqngvlLAERENSI 1472
Cdd:TIGR02168 377 LEEQLETLRSKVAQLELQ--------IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE---------EAELKELQ 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1473 KAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELvASKCDlslMLKEAQNAKKNLEKEHTHILQAK 1552
Cdd:TIGR02168 440 AELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL-QARLD---SLERLQENLEGFSEGVKALLKNQ 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1553 ENLDAELNtccsekniLLRDSLNLQEECQK-LSEEIQEMQQSLILEQEARAKEKESSLYENNQlhGRMVLLEQEVEELRv 1631
Cdd:TIGR02168 516 SGLSGILG--------VLSELISVDEGYEAaIEAALGGRLQAVVVENLNAAKKAIAFLKQNEL--GRVTFLPLDSIKGT- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1632 cteELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKaELQELHSCLTkiLDDLQLNHE 1711
Cdd:TIGR02168 585 ---EIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAK-KLRPGYRIVT--LDGDLVRPG 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1712 VTLAEKAQvmQDNQNLLAEKSEMmlekDELLKEKEMLAESYFILQKEISQLAKTnshisanLLESQNENRTLRKDKNKLT 1791
Cdd:TIGR02168 659 GVITGGSA--KTNSSILERRREI----EELEEKIEELEEKIAELEKALAELRKE-------LEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1792 LKIRELETlQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQK 1871
Cdd:TIGR02168 726 RQISALRK-DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREA 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1872 MEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEvtsHQKLEEERSVLNNQLLEMKKSLPsntlRESKFIKD 1951
Cdd:TIGR02168 805 LDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ---IEELSEDIESLAAEIEELEELIE----ELESELEA 877
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1952 ADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE-NASAKSLHSVVQTLEsdkvKLELKVKNLELQLKEN 2025
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRElEELREKLAQLELRLE----GLEVRIDNLQERLSEE 948
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
407-1184 |
5.29e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 78.24 E-value: 5.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 407 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESitkgDLEQKSQISEDpENVATVSEKSRIMELEKDlal 486
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESN----ELHEKQKFYLR-QSVIDLQTKLQEMQMERD--- 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 487 rvqEVAELRRRLESNKPagdvdmslSLLQEISSLQEKLEVTRtdhqreitSLKEHFGAREETHQKEIKALYTATEKLSKE 566
Cdd:pfam15921 128 ---AMADIRRRESQSQE--------DLRNQLQNTVHELEAAK--------CLKEDMLEDSNTQIEQLRKMMLSHEGVLQE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 567 NESLKSKLEHAN----KENSDVIALWKSKLETAIASHQQAMEElKVSFSKGlgtetaEFAELKTQIEKMRLDYQHEIENL 642
Cdd:pfam15921 189 IRSILVDFEEASgkkiYEHDSMSTMHFRSLGSAISKILRELDT-EISYLKG------RIFPVEDQLEALKSESQNKIELL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 643 QNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKEL--EVLQAKCNEQ 720
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLrsELREAKRMYE 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 721 TKvIDNFTSQLKATEEKLLDL----DALQKASSEGKSEMEKLRQQLEAAEKQIKhLEIEKNA---ESSKASSIT-----R 788
Cdd:pfam15921 342 DK-IEELEKQLVLANSELTEArterDQFSQESGNLDDQLQKLLADLHKREKELS-LEKEQNKrlwDRDTGNSITidhlrR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 789 ELQGRELKLTNLQENLSEV-SQVKDTLEKELQILKEKfAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL 867
Cdd:pfam15921 420 ELDDRNMEVQRLEALLKAMkSECQGQMERQMAAIQGK-NESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTV 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 868 AEMEAKFREKdereEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDM 947
Cdd:pfam15921 499 SDLTASLQEK----ERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENM 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 948 TLKAEQSQQeaaekheeEKKELERKLSDLEKKMETSHNQCQELKAGYEKATS---ETKTKHEEILQNLRKTLLDTEDKLK 1024
Cdd:pfam15921 575 TQLVGQHGR--------TAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAkirELEARVSDLELEKVKLVNAGSERLR 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1025 GAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELR--------GLKSEKQLLSQEGNDLKLENGS---LL 1093
Cdd:pfam15921 647 AVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMEtttnklkmQLKSAQSELEQTRNTLKSMEGSdghAM 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1094 SKLVELEAKIALLQGDQQKLWSvnetlnleKEKFLEE---KQDAEKHYEQEHLNK-----EVLAVEREKLLKEINV--AQ 1163
Cdd:pfam15921 727 KVAMGMQKQITAKRGQIDALQS--------KIQFLEEamtNANKEKHFLKEEKNKlsqelSTVATEKNKMAGELEVlrSQ 798
|
810 820
....*....|....*....|.
gi 1622847178 1164 EELLKINMENDSLQASKVSMQ 1184
Cdd:pfam15921 799 ERRLKEKVANMEVALDKASLQ 819
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
341-893 |
1.07e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 77.03 E-value: 1.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 341 SRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELaLARDGHDQHVLELEAKMDQLRTMVEAA 420
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEV-KELEELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 421 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVatvseKSRIMELEKDLALRVQEVAELRRRLEs 500
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEY-----LDELREIEKRLSRLEEEINGIEERIK- 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 501 nKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQ--REITSLKEhfgaREETHQKEIKALytATEKLSKENESLKSKLEHAN 578
Cdd:PRK03918 332 -ELEEKEERLEELKKKLKELEKRLEELEERHElyEEAKAKKE----ELERLKKRLTGL--TPEKLEKELEELEKAKEEIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 579 KENSDVIALwKSKLETAIASHQQAMEELKVsfskglgtetaefAELKTQIEKMRLDYQHEiENLQNQQDSERSAHAKEME 658
Cdd:PRK03918 405 EEISKITAR-IGELKKEIKELKKAIEELKK-------------AKGKCPVCGRELTEEHR-KELLEEYTAELKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 659 ALRAKLMKVIKEKENSLEAIK-----SKLDKAEDQhLVEMEETLNK--LQEAEIKVKELEVLQAKCNEQTKVIDNFTSQL 731
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKkeselIKLKELAEQ-LKELEEKLKKynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 732 KATEEKLLDLDALQKASSEGKSEMEKLRQQL--------EAAEKQIKHLE------IEKNAESSKASSITRELQGRELKL 797
Cdd:PRK03918 549 EKLEELKKKLAELEKKLDELEEELAELLKELeelgfesvEELEERLKELEpfyneyLELKDAEKELEREEKELKKLEEEL 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 798 TNLQENLSEVSQVKDTLEKELQILK-----EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEa 872
Cdd:PRK03918 629 DKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE- 707
|
570 580
....*....|....*....|.
gi 1622847178 873 kfrEKDEREEQLIKAKEKLEN 893
Cdd:PRK03918 708 ---KAKKELEKLEKALERVEE 725
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1037-1695 |
1.51e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.51 E-value: 1.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1037 LEELRKQADKAksltylltsakkeielmsEELRGLKSEKQLLSQEgndlklengSLLSKLVELEAKIALLQGDQQKLwsv 1116
Cdd:COG1196 202 LEPLERQAEKA------------------ERYRELKEELKELEAE---------LLLLKLRELEAELEELEAELEEL--- 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1117 netlNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDA 1196
Cdd:COG1196 252 ----EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1197 LIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKL---QSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDN 1273
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALleaEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1274 TCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNT 1353
Cdd:COG1196 408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1354 SLTKLLEEIKARRAVTDSEciqllhEKETLAASERRLLAEKEELLSENRIITEKLhkcsEEAAHTEMSLNEKItYLTSEK 1433
Cdd:COG1196 488 EAAARLLLLLEAEADYEGF------LEGVKAALLLAGLRGLAGAVAVLIGVEAAY----EAALEAALAAALQN-IVVEDD 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1434 EMASQKMTKLKKHQDS------LLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALK 1507
Cdd:COG1196 557 EVAAAAIEYLKAAKAGratflpLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1508 KELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEhthiLQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEI 1587
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA----LLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1588 QEMQQSLILEQEARAKEKEsslyennqlhgrmvLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIE--EKEL-- 1663
Cdd:COG1196 713 EEERLEEELEEEALEEQLE--------------AEREELLEELLEEEELLEEEALEELPEPPDLEELERELErlEREIea 778
|
650 660 670
....*....|....*....|....*....|....*....
gi 1622847178 1664 -----LTA--EAAQLAAHIKTLKSDFAALSKSKAELQEL 1695
Cdd:COG1196 779 lgpvnLLAieEYEELEERYDFLSEQREDLEEARETLEEA 817
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
600-1366 |
1.56e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 76.65 E-value: 1.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 600 QQAMEELKVsFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQ---QDSERSAHAKEMEALRAKLMKV---IKEKEN 673
Cdd:TIGR02169 173 EKALEELEE-VEENIERLDLIIDEKRQQLERLRREREKAERYQALLkekREYEGYELLKEKEALERQKEAIerqLASLEE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 674 SLEAIKSKLDKAEDqhlvEMEETLNKLQEAEIKVKELEvlQAKCNEQTKVIDNFTSQLKATEEKLldldalqkassegks 753
Cdd:TIGR02169 252 ELEKLTEEISELEK----RLEEIEQLLEELNKKIKDLG--EEEQLRVKEKIGELEAEIASLERSI--------------- 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 754 emEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAV 833
Cdd:TIGR02169 311 --AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 834 SVQRSMQETVNKLH-------QKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNS 906
Cdd:TIGR02169 389 DYREKLEKLKREINelkreldRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 907 SQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIED-----MTLKAE---------QSQQEAAEKHEEEKKELERK 972
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraveEVLKASiqgvhgtvaQLGSVGERYATAIEVAAGNR 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 973 LSDLEKKMETSHNQCQEL----KAGYEKATSETKTKHEEILQNLRKT---------LLDTEDKLKGARE---ENSGLLQE 1036
Cdd:TIGR02169 549 LNNVVVEDDAVAKEAIELlkrrKAGRATFLPLNKMRDERRDLSILSEdgvigfavdLVEFDPKYEPAFKyvfGDTLVVED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1037 LEELRKQ-----------------------ADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLL 1093
Cdd:TIGR02169 629 IEAARRLmgkyrmvtlegelfeksgamtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1094 SKLVELEAKIALLQGDQQKLWSVNETLN---LEKEKFLEEKQDAEKHYEQEhlnKEVLAVEREKLLKEINVAQEELLKI- 1169
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKerlEELEEDLSSLEQEIENVKSE---LKELEARIEELEEDLHKLEEALNDLe 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1170 NMENDS----LQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLqssyEELVK 1245
Cdd:TIGR02169 786 ARLSHSripeIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI----ENLNG 861
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1246 DQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAAL-QVKQLLR--- 1321
Cdd:TIGR02169 862 KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEeELSEIEDpkg 941
|
810 820 830 840
....*....|....*....|....*....|....*....|....*..
gi 1622847178 1322 --SEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARR 1366
Cdd:TIGR02169 942 edEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRL 988
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
823-1640 |
3.45e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.49 E-value: 3.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 823 EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLA----EMEAKFREKDEREEQLIKAKEKLENDIAEI 898
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQAllkeKREYEGYELLKEKEALERQKEAIERQLASL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 899 MKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASF-LQKSIEDMTLKAEQSQqeaaekheeekkeleRKLSDLE 977
Cdd:TIGR02169 250 EEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEAEIASLE---------------RSIAEKE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 978 KKMETSHNQCQELKAGYEKaTSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQA----DKAKSLTYL 1053
Cdd:TIGR02169 315 RELEDAEERLAKLEAEIDK-LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFaetrDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1054 LTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEA----KIALLQGDQQKLWSVNETLNLEKEKFLE 1129
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEekedKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1130 EKQDAEK-HYEQEHLNKEVLAVEREKLLKEI----NVAQEELLK----------------------------------IN 1170
Cdd:TIGR02169 474 LKEEYDRvEKELSKLQRELAEAEAQARASEErvrgGRAVEEVLKasiqgvhgtvaqlgsvgeryataievaagnrlnnVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1171 MENDSLQASKVSmqtLIEELQLSKDALIAKTEKDQEERDhladqIKKLITENFI-LAKDKDDIIQKLQSSYEELVKDQkA 1249
Cdd:TIGR02169 554 VEDDAVAKEAIE---LLKRRKAGRATFLPLNKMRDERRD-----LSILSEDGVIgFAVDLVEFDPKYEPAFKYVFGDT-L 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1250 LVQDIEdlTAEKKSALEKLSNLDNTCIALK-------VERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRS 1322
Cdd:TIGR02169 625 VVEDIE--AARRLMGKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1323 EASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAAS----ERRLLAEKEEL- 1397
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARieelEEDLHKLEEALn 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1398 -------LSENRIITEKLHKCSEEAAHTEMSLNE---KITYLTSEKEMASQKMTKLKKHQDSLLKEKSALEtqngvllAE 1467
Cdd:TIGR02169 783 dlearlsHSRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIE-------KE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1468 RENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTH 1547
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1548 ILQAKENLDAElntccSEKNILLRDslnLQEECQKLSEEIQEMQQSLILEQEarakEKESSLYENNQLHGRMVLLEQEVE 1627
Cdd:TIGR02169 936 IEDPKGEDEEI-----PEEELSLED---VQAELQRVEEEIRALEPVNMLAIQ----EYEEVLKRLDELKEKRAKLEEERK 1003
|
890
....*....|...
gi 1622847178 1628 ELRVCTEELQSEK 1640
Cdd:TIGR02169 1004 AILERIEEYEKKK 1016
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
421-1300 |
7.83e-13 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 74.24 E-value: 7.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 421 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENvatvsEKSRIMELEKDLALRVQEVAELRRRLES 500
Cdd:pfam02463 168 KRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQ-----LKEKLELEEEYLLYLDYLKLNEERIDLL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 501 NKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKE 580
Cdd:pfam02463 243 QELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 581 NSdvialwksKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENL----QNQQDSERSAHAKE 656
Cdd:pfam02463 323 KK--------KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLakkkLESERLSSAAKLKE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 657 MEALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 736
Cdd:pfam02463 395 EELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLL 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 737 KLLDLDALQKAssegKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL------------ 804
Cdd:pfam02463 475 KETQLVKLQEQ----LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVenykvaistavi 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 805 SEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKdEREEQL 884
Cdd:pfam02463 551 VEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAK-VVEGIL 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 885 IKAKEKLENDIAEIMKMSGDNSSQLTKMNDElrlKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEE 964
Cdd:pfam02463 630 KDTELTKLKESAKAKESGLRKGVSLEEGLAE---KSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQ 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 965 EKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKheEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQA 1044
Cdd:pfam02463 707 REKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKID--EEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTE 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1045 DKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEK 1124
Cdd:pfam02463 785 KLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEIT 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1125 EKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLS-----KDALIA 1199
Cdd:pfam02463 865 KEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYeeepeELLLEE 944
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1200 KTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQssYEELVKDQKALVQDIEDLTAEKKSALEKLsnLDNTCIALK 1279
Cdd:pfam02463 945 ADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEE--FEEKEERYNKDELEKERLEEEKKKLIRAI--IEETCQRLK 1020
|
890 900
....*....|....*....|.
gi 1622847178 1280 VERDNALQNNRDLQLETDMLL 1300
Cdd:pfam02463 1021 EFLELFVSINKGWNKVFFYLE 1041
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1254-2070 |
1.09e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.95 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1254 IEDLTAEKKSALEKLS----NLD--NTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQaaLQVKQLLRSEASGL 1327
Cdd:TIGR02169 165 VAEFDRKKEKALEELEeveeNIErlDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYEL--LKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1328 RAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKAR-RAVTDSECIQLLHEKETLAASERRLLAEKEELLSEnriite 1406
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERE------ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1407 klhkcSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAEREnsikaigdlkrqcdQES 1486
Cdd:TIGR02169 317 -----LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELE--------------EVD 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1487 ANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEK 1566
Cdd:TIGR02169 378 KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1567 NILLRDSLNLQEECQKLSEEIQEMQQSLI-LEQEARAKEKESSLYENNQLHGRMV--LLEQEVEELRVCTEELQS--EKF 1641
Cdd:TIGR02169 458 EQLAADLSKYEQELYDLKEEYDRVEKELSkLQRELAEAEAQARASEERVRGGRAVeeVLKASIQGVHGTVAQLGSvgERY 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1642 VLLQEkTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHeVTLAEK---- 1717
Cdd:TIGR02169 538 ATAIE-VAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDL-VEFDPKyepa 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1718 -AQVMQDN---QNLLAEKSEM------MLEKDELLKEKEMLAESYFILQKEISQLAKtnshiSANLLESQNENRTLRKDK 1787
Cdd:TIGR02169 616 fKYVFGDTlvvEDIEAARRLMgkyrmvTLEGELFEKSGAMTGGSRAPRGGILFSRSE-----PAELQRLRERLEGLKREL 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1788 NKLTLKIRELEtlqsftaaqtaedamqimeqmtKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTV 1867
Cdd:TIGR02169 691 SSLQSELRRIE----------------------NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSS 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1868 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSR-DEVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRE 1945
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEK 828
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1946 S----------KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS----LHSVVQTLESDKVKL 2011
Cdd:TIGR02169 829 EylekeiqelqEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKerdeLEAQLRELERKIEEL 908
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 2012 ELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDL 2070
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEI 967
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
694-1257 |
1.77e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 1.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 694 EETLNKLQEA------------------------------------EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEK 737
Cdd:COG1196 175 EEAERKLEATeenlerledilgelerqleplerqaekaeryrelkeELKELEAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 738 lldLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKE 817
Cdd:COG1196 255 ---LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 818 LQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAE 897
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEA-------LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 898 IMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLE 977
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 978 K--KMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGARE----------------ENSGLLQELEE 1039
Cdd:COG1196 485 ElaEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEaaleaalaaalqnivvEDDEVAAAAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1040 LRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEgndLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNET 1119
Cdd:COG1196 565 YLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS---DLREADARYYVLGDTLLGRTLVAARLEAALRRAVT 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1120 LNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIA 1199
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEEL 721
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 1200 KTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDL 1257
Cdd:COG1196 722 EEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
794-1367 |
1.96e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 1.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 794 ELKLTNLQENLSEVSQVKDTLEKELQILKE-------------------------KFAEASEEAVSVQRSMQETVNKLHQ 848
Cdd:COG1196 178 ERKLEATEENLERLEDILGELERQLEPLERqaekaeryrelkeelkeleaellllKLRELEAELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 849 KEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQL 928
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 929 KLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELK--AGYEKATSETKTKHE 1006
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAqlEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1007 EILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLK 1086
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1087 LENGSLLSKLVelEAKIALLQGDQQKLW-SVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEE 1165
Cdd:COG1196 498 EAEADYEGFLE--GVKAALLLAGLRGLAgAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1166 LLKINMENDSLQASKVSMQTLIEELQlskdALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVK 1245
Cdd:COG1196 576 FLPLDKIRARAALAAALARGAIGAAV----DLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTL 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1246 DQKALVQDIEDLTAEKK----SALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLR 1321
Cdd:COG1196 652 EGEGGSAGGSLTGGSRRellaALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLE 731
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1622847178 1322 SEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRA 1367
Cdd:COG1196 732 AEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
334-1011 |
3.14e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 72.48 E-value: 3.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 334 GLLTETSSRYARKISGTTALQEALK--EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALARDGHDQHVLELEAKMD 411
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEARKAEDARKAEEARK----AEDAKRVEIARKAEDARKAEEARKAE 1173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 412 QLRTMVEAADREKVellnQLEEEKRKVEDLQfrvEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEKDlALRVQEV 491
Cdd:PTZ00121 1174 DAKKAEAARKAEEV----RKAEELRKAEDAR---KAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKD-AEEAKKA 1245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 492 AELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKA----------LYTATE 561
Cdd:PTZ00121 1246 EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKkaeeakkadeAKKKAE 1325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 562 KLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQA-MEELKVSFSKGLGTETAEFAELKTQIEKMRL---DYQH 637
Cdd:PTZ00121 1326 EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAeAAEKKKEEAKKKADAAKKKAEEKKKADEAKKkaeEDKK 1405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 638 EIENLQNQQDSERSAHAKEMEALRAK----LMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKE---L 710
Cdd:PTZ00121 1406 KADELKKAAAAKKKADEAKKKAEEKKkadeAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEakkA 1485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 711 EVLQAKCNEQTKVIDNF---------TSQLKATEEKLlDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESS 781
Cdd:PTZ00121 1486 DEAKKKAEEAKKKADEAkkaaeakkkADEAKKAEEAK-KADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKK 1564
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 782 KASSITRELQGRELKLTNLQE----NLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQE-----TVNKLHQKEEQ 852
Cdd:PTZ00121 1565 KAEEAKKAEEDKNMALRKAEEakkaEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAeeekkKVEQLKKKEAE 1644
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 853 FNMLSSDLEKLRENL---AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLK 929
Cdd:PTZ00121 1645 EKKKAEELKKAEEENkikAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKA 1724
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 930 LTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEIL 1009
Cdd:PTZ00121 1725 EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIF 1804
|
..
gi 1622847178 1010 QN 1011
Cdd:PTZ00121 1805 DN 1806
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-898 |
4.05e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.89 E-value: 4.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDG---HDQHVLELEAKMDQLRTMVEAADREKVELL 428
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 429 NQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISE----DPENVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPA 504
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEaelaEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 505 gdvdmsLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALyTATEKLSKENESLKSKLEHANKENSDV 584
Cdd:COG1196 403 ------EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA-EEEAELEEEEEALLELLAELLEEAALL 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 585 IALWKSKLET-----AIASHQQAMEELKVSFSKG--------------------LGTETAEFAELKTQIEKMRLDYQHEI 639
Cdd:COG1196 476 EAALAELLEElaeaaARLLLLLEAEADYEGFLEGvkaalllaglrglagavavlIGVEAAYEAALEAALAAALQNIVVED 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 640 EN-LQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCN 718
Cdd:COG1196 556 DEvAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAA 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 719 EQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLT 798
Cdd:COG1196 636 LRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 799 NLQENLSE--VSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdLEKLRENL--------- 867
Cdd:COG1196 716 RLEEELEEeaLEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER-------LEREIEALgpvnllaie 788
|
570 580 590
....*....|....*....|....*....|...
gi 1622847178 868 --AEMEAKFREKDEREEQLIKAKEKLENDIAEI 898
Cdd:COG1196 789 eyEELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
212-272 |
7.42e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 70.87 E-value: 7.42e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847178 212 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 272
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
625-1349 |
9.88e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 70.92 E-value: 9.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 625 KTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKV------IKEKENSLEAIKSKLDKAEDQHLVEMEETLN 698
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLqtklqeMQMERDAMADIRRRESQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 699 KLQEAE-IKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKL--RQQLEAAEKQIKHLEIE 775
Cdd:pfam15921 153 ELEAAKcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMhfRSLGSAISKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 776 KNAESSKASSITRELQGRELKLTN-----LQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSM----QETVNKL 846
Cdd:pfam15921 233 ISYLKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLeiiqEQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 847 HQKEEQFNMLSSDLEKLRENLAEMEAKFREK-DEREEQLIKAKEKLENDIAE---IMKMSGDNSSQLTKMNDEL--RLKE 920
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSELREAKRMYEDKiEELEKQLVLANSELTEARTErdqFSQESGNLDDQLQKLLADLhkREKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 921 RYVEELQLKL-----TKANENASFLQKSIEDMTLKAEQsqqeaaekheeekkelerklsdLEKKMETSHNQCQElKAGYE 995
Cdd:pfam15921 393 LSLEKEQNKRlwdrdTGNSITIDHLRRELDDRNMEVQR----------------------LEALLKAMKSECQG-QMERQ 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 996 KATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKqadKAKSLTYLLTSAKKEIELMSEELRGLKSEK 1075
Cdd:pfam15921 450 MAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSER---TVSDLTASLQEKERAIEATNAEITKLRSRV 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1076 QLLSQEGNDLKLENGSLLSKLVELEA-KIALLQGDQqklwsVNETLNLEKEKFLEekqdaekHYEQEHLNKEVLAVEREK 1154
Cdd:pfam15921 527 DLKLQELQHLKNEGDHLRNVQTECEAlKLQMAEKDK-----VIEILRQQIENMTQ-------LVGQHGRTAGAMQVEKAQ 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1155 LLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALI------AKTEKD-QEERDHLADQIKKLITENFILAK 1227
Cdd:pfam15921 595 LEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVnagserLRAVKDiKQERDQLLNEVKTSRNELNSLSE 674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1228 DKDDIIQKLQSSYEELVKDQKALVQDIEDLTAE---KKSALEKLSNLDNTCIALKVERDNALQNNRDlqlETDMLLHDQE 1304
Cdd:pfam15921 675 DYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSEleqTRNTLKSMEGSDGHAMKVAMGMQKQITAKRG---QIDALQSKIQ 751
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1622847178 1305 KLNASLQAALQVKQLLRSEASGLRAQLDDASKALRK--AELETMQLQ 1349
Cdd:pfam15921 752 FLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKmaGELEVLRSQ 798
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
357-953 |
2.44e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 69.38 E-value: 2.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 357 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALARDG-------HDQHVLELEAKMDQLRTMVEAADREKV 425
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 426 ELLNQLEEekrkvedlQFRVEEESITKGDLEqKSQISEDPENVATvseksrimELEKDLALRVQEVAELRRRLESNKPAG 505
Cdd:pfam15921 342 DKIEELEK--------QLVLANSELTEARTE-RDQFSQESGNLDD--------QLQKLLADLHKREKELSLEKEQNKRLW 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 506 DVDMSLSLlqEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENeSLKSKLEHANKENSDVI 585
Cdd:pfam15921 405 DRDTGNSI--TIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-SLTAQLESTKEMLRKVV 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 586 ALWKSKLETaIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQhEIENLQNQQDSERSAHAkEMEALRA--- 662
Cdd:pfam15921 482 EELTAKKMT-LESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQ-ELQHLKNEGDHLRNVQT-ECEALKLqma 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 663 ---KLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLL 739
Cdd:pfam15921 559 ekdKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLV 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 740 DLDALQ-KASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKL-TNLQENLSEVSQVKDTLeke 817
Cdd:pfam15921 639 NAGSERlRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLkMQLKSAQSELEQTRNTL--- 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 818 lqilkeKFAEASE-EAVSVQRSMQETVNKlhqKEEQFNMLSSDLEKLREnlaEMEAKFREKDEREEQLIKAKEKLENDIA 896
Cdd:pfam15921 716 ------KSMEGSDgHAMKVAMGMQKQITA---KRGQIDALQSKIQFLEE---AMTNANKEKHFLKEEKNKLSQELSTVAT 783
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 897 EIMKMSGDnssqltkmNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQ 953
Cdd:pfam15921 784 EKNKMAGE--------LEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQ 832
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
975-1520 |
3.09e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 3.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 975 DLEKKMETSHNQCQELKAGYEKATSETKTKHEEIlQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQ----------- 1043
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAEL-EELRLELEELELELEEAQAEEYELLAELARLEQDiarleerrrel 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1044 ADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLE 1123
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1124 KEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEK 1203
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1204 DQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKL--SNLDNTCIALKVE 1281
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAleAALAAALQNIVVE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1282 RDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEE 1361
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1362 IKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMT 1441
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1442 KLKKHQDSLLKEKSALETQNGVLLAEREnsikaigdlkrqcdQESANRRIIVQENMKLLGNIDALKKELQERKNENQEL 1520
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELL--------------EEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
663-1267 |
5.90e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 67.74 E-value: 5.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 663 KLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLD 742
Cdd:TIGR04523 79 ILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLN 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 743 alqkassegkSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENlsevSQVKDTLEKELQILK 822
Cdd:TIGR04523 159 ----------NKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKK----IQKNKSLESQISELK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 823 EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLaemEAKFREKDEREEQLIKAKEKLENDIAEIMKMS 902
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQL---SEKQKELEQNNKKIKELEKQLNQLKSEISDLN 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 903 GDNSSQLTK-MNDELRLKERYVEELQLKLTKANENASFLQKSIEDMT----------------LKAEQSQ----QEAAEK 961
Cdd:TIGR04523 302 NQKEQDWNKeLKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKkeltnsesensekqreLEEKQNEieklKKENQS 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 962 HEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEIlQNLRKTLLDTEDKLKGAREENSGLLQELEELR 1041
Cdd:TIGR04523 382 YKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEI-ERLKETIIKNNSEIKDLTNQDSVKELIIKNLD 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1042 KqadKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLwsvnETLN 1121
Cdd:TIGR04523 461 N---TRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL----ESEK 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1122 LEKEKFLEEKQDaekhyeqeHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKT 1201
Cdd:TIGR04523 534 KEKESKISDLED--------ELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEI 605
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847178 1202 EKDQEERDHLADQIKKLITENfilaKDKDDIIQKLQSSYEELVKDQKaLVQDIEDLTAEKKSALEK 1267
Cdd:TIGR04523 606 EEKEKKISSLEKELEKAKKEN----EKLSSIIKNIKSKKNKLKQEVK-QIKETIKEIRNKWPEIIK 666
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
353-1172 |
6.75e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.17 E-value: 6.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 353 LQEALKEKQQHIEQLLAERD--------LERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRTMVEAADREK 424
Cdd:TIGR02169 189 LDLIIDEKRQQLERLRREREkaeryqalLKEKREYEGYELLKEKEALERQKEAIERQ-LASLEEELEKLTEEISELEKRL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 425 VELLNQLEEEKRKVEDL----QFRVEEE-SITKGDLEQ-KSQISEDPENVATVSEKSRIMELEKDLALRvqEVAELRRRL 498
Cdd:TIGR02169 268 EEIEQLLEELNKKIKDLgeeeQLRVKEKiGELEAEIASlERSIAEKERELEDAEERLAKLEAEIDKLLA--EIEELEREI 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 499 ESNKPAGDvdmslSLLQEISSLQEKLEVTRTDHQREITSLKEHFgareethqKEIKALYTATEKLSKENESLK---SKLE 575
Cdd:TIGR02169 346 EEERKRRD-----KLTEEYAELKEELEDLRAELEEVDKEFAETR--------DELKDYREKLEKLKREINELKrelDRLQ 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 576 HANKENSDVIALWKSKLETAIASHQQAMEELKvsfSKGLGTETAEfAELKtQIEKMRLDYQHEIENLQNQQD---SERSA 652
Cdd:TIGR02169 413 EELQRLSEELADLNAAIAGIEAKINELEEEKE---DKALEIKKQE-WKLE-QLAADLSKYEQELYDLKEEYDrveKELSK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 653 HAKEMEALRAKL-------------MKVIKEKENSLEAIKSKLDKAEDQHLVEMEETL-NKLQEAeikVKELEVLQAKCN 718
Cdd:TIGR02169 488 LQRELAEAEAQAraseervrggravEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAgNRLNNV---VVEDDAVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 719 EQTKvidnftsQLKATEEKLLDLDALQKASSEGKSEMEK----------------------------LRQQLEAAEKQIK 770
Cdd:TIGR02169 565 ELLK-------RRKAGRATFLPLNKMRDERRDLSILSEDgvigfavdlvefdpkyepafkyvfgdtlVVEDIEAARRLMG 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 771 H-----LEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNK 845
Cdd:TIGR02169 638 KyrmvtLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 846 LHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRlkERYVEE 925
Cdd:TIGR02169 718 IGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS--HSRIPE 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 926 LQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEkheeekkelerklsdLEKKMETSHNQ---CQELKAGYEKATSETK 1002
Cdd:TIGR02169 796 IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY---------------LEKEIQELQEQridLKEQIKSIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1003 TKHEEI---LQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSltylltsakkEIELMSEELRGLKSEKQLLS 1079
Cdd:TIGR02169 861 GKKEELeeeLEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA----------QIEKKRKRLSELKAKLEALE 930
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1080 QEGNDLKLENGSLLSkLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEI 1159
Cdd:TIGR02169 931 EELSEIEDPKGEDEE-IPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERI 1009
|
890
....*....|...
gi 1622847178 1160 NVAQEELLKINME 1172
Cdd:TIGR02169 1010 EEYEKKKREVFME 1022
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
976-1693 |
1.01e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.45 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 976 LEKKMETSHNQCQELkagyEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLqeleELRKQADKAKSltyllt 1055
Cdd:pfam15921 76 IERVLEEYSHQVKDL----QRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMA----DIRRRESQSQE------ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1056 SAKKEIELMSEELRGLKSEKQLLSQEGNdlklengsllSKLVELEAKIALLQGDQQKLWSVNETLnlekekfleEKQDAE 1135
Cdd:pfam15921 142 DLRNQLQNTVHELEAAKCLKEDMLEDSN----------TQIEQLRKMMLSHEGVLQEIRSILVDF---------EEASGK 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1136 KHYEQEHLNK---EVLAVEREKLLKEINVA-------------QEELLKINMENDS---LQASKVSMQTLIEELQLSKDA 1196
Cdd:pfam15921 203 KIYEHDSMSTmhfRSLGSAISKILRELDTEisylkgrifpvedQLEALKSESQNKIellLQQHQDRIEQLISEHEVEITG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1197 LIAKTEKDQEERDHLADQIKkLITENfilAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCI 1276
Cdd:pfam15921 283 LTEKASSARSQANSIQSQLE-IIQEQ---ARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSEL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1277 A-LKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASG-------LRAQLDDASKALRKAE--LETM 1346
Cdd:pfam15921 359 TeARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGnsitidhLRRELDDRNMEVQRLEalLKAM 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1347 Q-------------LQATNTSLTKLleeikarravtDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSE 1413
Cdd:pfam15921 439 KsecqgqmerqmaaIQGKNESLEKV-----------SSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQE 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1414 EAAHTEMSlNEKITYLTSEKEMASQKMTKLKKHQDSLLK---EKSALETQNG-------VLLAERENSIKAIGDLKR--- 1480
Cdd:pfam15921 508 KERAIEAT-NAEITKLRSRVDLKLQELQHLKNEGDHLRNvqtECEALKLQMAekdkvieILRQQIENMTQLVGQHGRtag 586
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1481 -------QCDQESANRRIIVQENMKLLGNIDALKKELQERKNEnqeLVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKE 1553
Cdd:pfam15921 587 amqvekaQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSD---LELEKVKLVNAGSERLRAVKDIKQERDQLLNEVK 663
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1554 NLDAELNTCCSEKNILLRDSLNLQEECQKLS-----------EEIQEMQQSLILEQEARAKEKESSLYENNQL---HGRM 1619
Cdd:pfam15921 664 TSRNELNSLSEDYEVLKRNFRNKSEEMETTTnklkmqlksaqSELEQTRNTLKSMEGSDGHAMKVAMGMQKQItakRGQI 743
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847178 1620 VLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKS--KAELQ 1693
Cdd:pfam15921 744 DALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVAldKASLQ 819
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
1.19e-10 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 67.02 E-value: 1.19e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1502-2083 |
1.25e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.01 E-value: 1.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1502 NIDALKKELQERKNENQELVASKCDLslmlkeaQNAKKNLEKEHTHILQAkenldaelntcCSEKNILLRDslnLQEECQ 1581
Cdd:PRK03918 166 NLGEVIKEIKRRIERLEKFIKRTENI-------EELIKEKEKELEEVLRE-----------INEISSELPE---LREELE 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1582 KLSEEIQEMQqSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQsEKFVLLQEKTKSEQEVAEIIEEK 1661
Cdd:PRK03918 225 KLEKEVKELE-ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELE-EKVKELKELKEKAEEYIKLSEFY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1662 ELLTAE-------AAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDL-QLNHEVTLAEKAQVMQDNQNLLaEKSE 1733
Cdd:PRK03918 303 EEYLDElreiekrLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLeELEERHELYEEAKAKKEELERL-KKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1734 MMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELetlqsftaaqTAEDAM 1813
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGREL----------TEEHRK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1814 QIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLkENNLKNVEELNKSKELL-----------TVENQKMEEFRKEIETL 1882
Cdd:PRK03918 452 ELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKELAeqlkeleeklkKYNLEELEKKAEEYEKL 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1883 KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLP---SNTLRE-----SKFI--KDA 1952
Cdd:PRK03918 531 KEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVeelEERLKElepfyNEYLelKDA 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1953 DEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSV--VQTLESDKVKLELKVKNLELQLKENKRQLS 2030
Cdd:PRK03918 611 EKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEKRRE 690
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1622847178 2031 SSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALN 2083
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALS 743
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
474-1074 |
1.38e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.01 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 474 KSRIMELEKDLALRVQEVAELRRRLEsnKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREITSLKEHFGAREEthqkEI 553
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELP--ELREELEKLEKEVKELEELKEEIE----ELEKELESLEGSKRKLEE----KI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 554 KALYTATEKLSKENESLKSKLEHANKensdvialwkskletaiashqqaMEELKVSFSKgLGTETAEFAELKTQIEKMRL 633
Cdd:PRK03918 262 RELEERIEELKKEIEELEEKVKELKE-----------------------LKEKAEEYIK-LSEFYEEYLDELREIEKRLS 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 634 DYQHEIENLQnqqdsersahakemealraKLMKVIKEKENSLEAIKSKLDKAEDQhLVEMEETLNKLQEAEIKVKELEVL 713
Cdd:PRK03918 318 RLEEEINGIE-------------------ERIKELEEKEERLEELKKKLKELEKR-LEELEERHELYEEAKAKKEELERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 714 QAKCNEQTKvidnftsqlkatEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKhlEIEKNAESSKASSITRELQGR 793
Cdd:PRK03918 378 KKRLTGLTP------------EKLEKELEELEKAKEEIEEEISKITARIGELKKEIK--ELKKAIEELKKAKGKCPVCGR 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 794 ELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQ--RSMQETVNKLHQKEEQFNMLSSDLEKLreNLAEME 871
Cdd:PRK03918 444 ELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLKELEEKLKKY--NLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 872 AKFREKDEREEQLIKAK-------------EKLENDIAEIMKMSGDNSSQLTKMNDELR-LKERYVEELQLKLtkaNENA 937
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKgeikslkkeleklEELKKKLAELEKKLDELEEELAELLKELEeLGFESVEELEERL---KELE 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 938 SFLQKSIEDMTLKAE-QSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTL 1016
Cdd:PRK03918 599 PFYNEYLELKDAEKElEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGL 678
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 1017 LDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSE 1074
Cdd:PRK03918 679 RAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKAL 736
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
356-898 |
1.41e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.88 E-value: 1.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 356 ALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEK 435
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELR----LELEELELELEEAQAEEYELLAELARLEQDIARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 436 RKVEDLQfrVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMSLSLLQ 515
Cdd:COG1196 309 ERRRELE--ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 516 EISSLQEKLEVTRTDHQREITSLKEHFGAREEtHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALwKSKLETA 595
Cdd:COG1196 387 ELLEALRAAAELAAQLEELEEAEEALLERLER-LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE-EEALLEL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 596 IASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSL 675
Cdd:COG1196 465 LAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 676 EAIKSKLDKAEDQHLVEMEETLNK--------LQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEK-------LLD 740
Cdd:COG1196 545 AAALQNIVVEDDEVAAAAIEYLKAakagratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARyyvlgdtLLG 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 741 LDALQKASSEGKSEMEKLRQQLEAAEKQikhLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQI 820
Cdd:COG1196 625 RTLVAARLEAALRRAVTLAGRLREVTLE---GEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 821 LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEI 898
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1299-1885 |
2.14e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 2.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1299 LLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLH 1378
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1379 EKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEkityLTSEKEMASQKMTKLKKHQDSLLKEKSALE 1458
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE----AEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1459 TQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAK 1538
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1539 KNLEKEHTHILQAKENLDAELNTccsekNILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGR 1618
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLL-----LLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1619 MV-LLEQEVEELRVCTEELQSEK------FVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAE 1691
Cdd:COG1196 548 LQnIVVEDDEVAAAAIEYLKAAKagratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1692 LQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESyfILQKEISQLAKTNSHISA 1771
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAER--LAEEELELEEALLAEEEE 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1772 NLLESQNENRTLRKDKNKLTLKIRELETLQsfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENN 1851
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAERE--ELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVN 783
|
570 580 590
....*....|....*....|....*....|....
gi 1622847178 1852 LKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1885
Cdd:COG1196 784 LLAIEEYEELEERYDFLSEQREDLEEARETLEEA 817
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
544-1264 |
4.51e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.47 E-value: 4.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 544 AREETHQKEIKALYTATEKLSKENESLKSKLEHANKEnsdvIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAE 623
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKR----LEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIAS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 624 LKTQIEkmrlDYQHEIENLQNQQ---DSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKAED--QHLVEMEETLN 698
Cdd:TIGR02169 306 LERSIA----EKERELEDAEERLaklEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDlrAELEEVDKEFA 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 699 KLQEAEIKVKE-LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LQKASSEGKSEMEKLRQQLEAAEKQIKHLE 773
Cdd:TIGR02169 382 ETRDELKDYREkLEKLKREINELKRELDRLQEELQRLSEELADLNAaiagIEAKINELEEEKEDKALEIKKQEWKLEQLA 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 774 IEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEK------------------------ELQILKEKFAEAS 829
Cdd:TIGR02169 462 ADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEErvrggraveevlkasiqgvhgtvaQLGSVGERYATAI 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 830 EEA---------VSVQRSMQETVNKLHQKE---------EQFNMLSSDLEKLRE--------NLAEMEAKFR-------- 875
Cdd:TIGR02169 542 EVAagnrlnnvvVEDDAVAKEAIELLKRRKagratflplNKMRDERRDLSILSEdgvigfavDLVEFDPKYEpafkyvfg 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 876 ------EKDEREEQLIKAKE-KLENDIAE--------------IMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKAN 934
Cdd:TIGR02169 622 dtlvveDIEAARRLMGKYRMvTLEGELFEksgamtggsraprgGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIE 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 935 ENASFLQKSIED---MTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAgYEKATSEtktkHEEILQN 1011
Cdd:TIGR02169 702 NRLDELSQELSDasrKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE-LEARIEE----LEEDLHK 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1012 LRKTLLDTEDKLKGAR-EENSGLLQELEELRKQADKA--------KSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEG 1082
Cdd:TIGR02169 777 LEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEARlreieqklNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1083 NDLKLENGSLLSKLVELEAKIALLQGdqqklwsvnetlnlEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVA 1162
Cdd:TIGR02169 857 ENLNGKKEELEEELEELEAALRDLES--------------RLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSEL 922
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1163 QEELLKINMENDSLQASKVSMQTLIEELqLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDiiqkLQSSYEE 1242
Cdd:TIGR02169 923 KAKLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDE----LKEKRAK 997
|
810 820
....*....|....*....|..
gi 1622847178 1243 LVKDQKALVQDIEDLTAEKKSA 1264
Cdd:TIGR02169 998 LEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
856-1667 |
2.01e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.07 E-value: 2.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 856 LSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANE 935
Cdd:pfam02463 147 IAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 936 NASFLQKSIEDM--TLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLR 1013
Cdd:pfam02463 227 LYLDYLKLNEERidLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1014 KTLLDTEDKLKGAREENSGLLQEL-------EELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLK 1086
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELkkekeeiEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1087 LENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHY---EQEHLNKEVLAVEREKLLKEINVAQ 1163
Cdd:pfam02463 387 SSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESielKQGKLTEEKEELEKQELKLLKDELE 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1164 EELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEEL 1243
Cdd:pfam02463 467 LKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAIS 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1244 VKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLEtdmllHDQEKLNASLQAALQVKQLLRSE 1323
Cdd:pfam02463 547 TAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLE-----IDPILNLAQLDKATLEADEDDKR 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1324 ASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRI 1403
Cdd:pfam02463 622 AKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEI 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1404 ITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERensikaigdLKRQCD 1483
Cdd:pfam02463 702 KKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEK---------SELSLK 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1484 QESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCC 1563
Cdd:pfam02463 773 EKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLA 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1564 SEKNILLRDSLNLQEECQKLSEEIQEMQQSLI---LEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEK 1640
Cdd:pfam02463 853 EEELERLEEEITKEELLQELLLKEEELEEQKLkdeLESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLK 932
|
810 820
....*....|....*....|....*..
gi 1622847178 1641 FVLLQEKTKSEQEVAEIIEEKELLTAE 1667
Cdd:pfam02463 933 YEEEPEELLLEEADEKEKEENNKEEEE 959
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-1074 |
4.68e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.01 E-value: 4.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 345 RKISGTTALQEALKEKQQHIEQLLAE-----RDLERAEVAKATSHVGEIEQELALARDGHDQHVLELE------------ 407
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEdaeerlakleae 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 408 -----AKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKsqisedpenvatvseksrimelek 482
Cdd:TIGR02169 331 idkllAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE------------------------ 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 483 dLALRVQEVAELRRRLESNKPAGD--VDMSLSLLQEISSLQEKLEVTRTDHQrEITSLKEHFGAREETHQKEIKALYTAT 560
Cdd:TIGR02169 387 -LKDYREKLEKLKREINELKRELDrlQEELQRLSEELADLNAAIAGIEAKIN-ELEEEKEDKALEIKKQEWKLEQLAADL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 561 EKLSKENESLKSKLEHANKENSDVialwKSKLETAIASHQQAMEELKVSFS--KGLGTETAEFAELKTQIEKMRLDYQHE 638
Cdd:TIGR02169 465 SKYEQELYDLKEEYDRVEKELSKL----QRELAEAEAQARASEERVRGGRAveEVLKASIQGVHGTVAQLGSVGERYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 639 IEN----------LQNQQDSERS-AHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQ--HLVEME----------- 694
Cdd:TIGR02169 541 IEVaagnrlnnvvVEDDAVAKEAiELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFavDLVEFDpkyepafkyvf 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 695 ------ETLNKLQEAEIKVKeLEVLQAKCNEQTKVI----------DNFTSQLKATEEKLLD--------LDALQKASSE 750
Cdd:TIGR02169 621 gdtlvvEDIEAARRLMGKYR-MVTLEGELFEKSGAMtggsraprggILFSRSEPAELQRLRErleglkreLSSLQSELRR 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 751 GKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASE 830
Cdd:TIGR02169 700 IENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEE 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 831 EAVSVQRSMQETvnKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLT 910
Cdd:TIGR02169 780 ALNDLEARLSHS--RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 911 KMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQsQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQEL 990
Cdd:TIGR02169 858 NLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRE-LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 991 kaGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRG 1070
Cdd:TIGR02169 937 --EDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
....
gi 1622847178 1071 LKSE 1074
Cdd:TIGR02169 1015 KKRE 1018
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
417-1273 |
1.06e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 417 VEAADREKVELLNQLEEEKRKVEDLQFRVEEesitkgdleqksqisedpenvatVSEKSRIMELEKDLALRVQEVAELRR 496
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDE-----------------------KRQQLERLRREREKAERYQALLKEKR 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 497 RLEsnkpagdvdmslslLQEISSLQEKLEVTRTDHQREITSLkehfgareethQKEIKALYTATEKLSKENESLKSKLEH 576
Cdd:TIGR02169 222 EYE--------------GYELLKEKEALERQKEAIERQLASL-----------EEELEKLTEEISELEKRLEEIEQLLEE 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 577 ANKENSDVialwkskletaiashqqaMEELKVSFSKGLGTETAEFAELKTQIEkmrlDYQHEIENLQNQQ---DSERSAH 653
Cdd:TIGR02169 277 LNKKIKDL------------------GEEEQLRVKEKIGELEAEIASLERSIA----EKERELEDAEERLaklEAEIDKL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 654 AKEMEALRAKLMKVIKEKENSLEAIKSKLDKAED--QHLVEMEETLNKLQEAEIKVKE-LEVLQAKCNEQTKVIDNFTSQ 730
Cdd:TIGR02169 335 LAEIEELEREIEEERKRRDKLTEEYAELKEELEDlrAELEEVDKEFAETRDELKDYREkLEKLKREINELKRELDRLQEE 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 731 LKATEEKLLDLDA----LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSE 806
Cdd:TIGR02169 415 LQRLSEELADLNAaiagIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAE 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 807 VSQVKDTLEK------------------------ELQILKEKFAEASEEA---------VSVQRSMQETVNKLHQKE--- 850
Cdd:TIGR02169 495 AEAQARASEErvrggraveevlkasiqgvhgtvaQLGSVGERYATAIEVAagnrlnnvvVEDDAVAKEAIELLKRRKagr 574
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 851 ------EQFNMLSSDLEKLRE--------NLAEMEAKFR--------------EKDEREEQLIKAKE-KLENDIAEIM-K 900
Cdd:TIGR02169 575 atflplNKMRDERRDLSILSEdgvigfavDLVEFDPKYEpafkyvfgdtlvveDIEAARRLMGKYRMvTLEGELFEKSgA 654
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 901 MSGDNSSQLTKMNDELRLKERyVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQeaaekheeekkelerKLSDLEKKM 980
Cdd:TIGR02169 655 MTGGSRAPRGGILFSRSEPAE-LQRLRERLEGLKRELSSLQSELRRIENRLDELSQ---------------ELSDASRKI 718
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 981 ETSHNQCQELKaGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQAD--KAKSLTYLLTSAK 1058
Cdd:TIGR02169 719 GEIEKEIEQLE-QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNdlEARLSHSRIPEIQ 797
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1059 KEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKF---LEEKQDAE 1135
Cdd:TIGR02169 798 AELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELeeeLEELEAAL 877
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1136 KHYEQEHLNKEVLAVEREKLLKEINVAQEEL-LKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDhlADQ 1214
Cdd:TIGR02169 878 RDLESRLGDLKKERDELEAQLRELERKIEELeAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS--LED 955
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1215 IKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDN 1273
Cdd:TIGR02169 956 VQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
995-1809 |
1.44e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.47 E-value: 1.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 995 EKATSETKTKHEEILQNLRKTLLDTEdkLKGAREENSGLLQELEELRKQADKaksLTYLLTSAKKEIELMSEELRGLKSE 1074
Cdd:TIGR02169 206 EREKAERYQALLKEKREYEGYELLKE--KEALERQKEAIERQLASLEEELEK---LTEEISELEKRLEEIEQLLEELNKK 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1075 -KQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVERE 1153
Cdd:TIGR02169 281 iKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYA 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1154 KLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQ----------IKKLITENF 1223
Cdd:TIGR02169 361 ELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEEladlnaaiagIEAKINELE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1224 ILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQ 1303
Cdd:TIGR02169 441 EEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASI 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1304 EKLNASLQAALQVK---QLLRSEASGLRAQ---LDDASKALRKAE-LETMQL-QATNTSLTKLLEEIKARRAVTDSECIQ 1375
Cdd:TIGR02169 521 QGVHGTVAQLGSVGeryATAIEVAAGNRLNnvvVEDDAVAKEAIElLKRRKAgRATFLPLNKMRDERRDLSILSEDGVIG 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1376 LLHE----------------KETLAASErrlLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTS-----EKE 1434
Cdd:TIGR02169 601 FAVDlvefdpkyepafkyvfGDTLVVED---IEAARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSrsepaELQ 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1435 MASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERK 1514
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1515 NENQELVASKCDLSLMLKEAQNAKKNLEKEHTHilQAKENLDAELNtccseknillrdslNLQEECQKLSEEIQEMQQSL 1594
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEARLSH--SRIPEIQAELS--------------KLEEEVSRIEARLREIEQKL 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1595 ileqEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAH 1674
Cdd:TIGR02169 822 ----NRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQ 897
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1675 IKTLKSdfaALSKSKAELQELHScltkilddlqlnHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFI 1754
Cdd:TIGR02169 898 LRELER---KIEELEAQIEKKRK------------RLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 1755 LQKEISQLAKTN-------SHISANLLESQNENRTLRKDKNKLTLKIRELETL--QSFTAAQTA 1809
Cdd:TIGR02169 963 VEEEIRALEPVNmlaiqeyEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKkrEVFMEAFEA 1026
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
405-1561 |
2.98e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 59.68 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRV------------EEESITKGDLEQKSQ---ISEDPENVA 469
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIkdlfdkyleiddEIIYINKLKLELKEKiknISDKNEYIK 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 470 TVSEKSRIM--------ELEKDLALRVQEVAELRRRLESNKPA-------GDVDmslSLLQEISSLQEKLEVTRTDHQRE 534
Cdd:TIGR01612 621 KAIDLKKIIennnayidELAKISPYQVPEHLKNKDKIYSTIKSelskiyeDDID---ALYNELSSIVKENAIDNTEDKAK 697
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 535 ITSLKehfgAREETHQKEIKALYTATEKLSKENeslkskLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGL 614
Cdd:TIGR01612 698 LDDLK----SKIDKEYDKIQNMETATVELHLSN------IENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKEL 767
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 615 GTETAEFAE-------LKTQIEKMRLDY--QHEIENLQNQ---QDSERSA-HAKEMEALRAKLMKVIKEKENSLEAIKSK 681
Cdd:TIGR01612 768 SNKINDYAKekdelnkYKSKISEIKNHYndQINIDNIKDEdakQNYDKSKeYIKTISIKEDEIFKIINEMKFMKDDFLNK 847
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 682 LDK---AEDQHLVEME-------ETLNKLQeAEIKVKELEVLQAKCNEQTKVIDNFTsqlKATEEKLLDLDALQKAS--- 748
Cdd:TIGR01612 848 VDKfinFENNCKEKIDseheqfaELTNKIK-AEISDDKLNDYEKKFNDSKSLINEIN---KSIEEEYQNINTLKKVDeyi 923
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 749 ---SEGKSEMEKLR-QQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVS-----QVKDTLEKELQ 819
Cdd:TIGR01612 924 kicENTKESIEKFHnKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKDASlndyeAKNNELIKYFN 1003
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 820 ILKEKFAEASEEAVSVQRSMQE-TVNKLHQKEEQFNMLSSDLEklrenLAEMEAKFREKDEREEQLIKAKEKLENdiaEI 898
Cdd:TIGR01612 1004 DLKANLGKNKENMLYHQFDEKEkATNDIEQKIEDANKNIPNIE-----IAIHTSIYNIIDEIEKEIGKNIELLNK---EI 1075
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 899 MKMSGDNSSQLTKMNDELRLK--ERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDL 976
Cdd:TIGR01612 1076 LEEAEINITNFNEIKEKLKHYnfDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDL 1155
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 977 EKKMETshnqcqelkAGYEKATSETKTKHEEILQNLrktlldteDKLKGAREENSGLLQELEELRK-----QADKAKSLT 1051
Cdd:TIGR01612 1156 EDVADK---------AISNDDPEEIEKKIENIVTKI--------DKKKNIYDEIKKLLNEIAEIEKdktslEEVKGINLS 1218
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1052 YLLTSAKKEIELMSEELRglKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALlqgdqqklwsvneTLNLEKEKFLEEK 1131
Cdd:TIGR01612 1219 YGKNLGKLFLEKIDEEKK--KSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEM-------------DIKAEMETFNISH 1283
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1132 QDAEKHYEQEHLNKEVLAVEREKLLK---------EINVAQEELLKINME----NDSLQASKVSMQTLIEELQLSK---- 1194
Cdd:TIGR01612 1284 DDDKDHHIISKKHDENISDIREKSLKiiedfseesDINDIKKELQKNLLDaqkhNSDINLYLNEIANIYNILKLNKikki 1363
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1195 -DALIAKTEKDQEERDHLADQIKKLITenfILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDN 1273
Cdd:TIGR01612 1364 iDEVKEYTKEIEENNKNIKDELDKSEK---LIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNIDT 1440
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1274 TCIALKVERDNALQNNRDLQLETDMLLH--DQEKLNASLQAALQVKQLL--RSEASGLRAQLDDASKALRK-AELETMQL 1348
Cdd:TIGR01612 1441 YFKNADENNENVLLLFKNIEMADNKSQHilKIKKDNATNDHDFNINELKehIDKSKGCKDEADKNAKAIEKnKELFEQYK 1520
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1349 QATNTSLTKLLE-EIKARRAVTDSECIQLLHEKETlAASERRLLAEKEElLSENRIITEKLhKCSEEAAHTEMSLNEKIT 1427
Cdd:TIGR01612 1521 KDVTELLNKYSAlAIKNKFAKTKKDSEIIIKEIKD-AHKKFILEAEKSE-QKIKEIKKEKF-RIEDDAAKNDKSNKAAID 1597
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1428 YLTSEKEMASQ--KMTKLKKHQDSLLKEKSALETQNGVL-LAERENSIKAIGDLKRQCDQ--ES-ANRRIIVQENMKLLG 1501
Cdd:TIGR01612 1598 IQLSLENFENKflKISDIKKKINDCLKETESIEKKISSFsIDSQDTELKENGDNLNSLQEflESlKDQKKNIEDKKKELD 1677
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 1502 NIDAlkkELQERKNE-NQELVASKCDLSLMLKEAQNAKKN-LEKEHTHILQAKENLDAELNT 1561
Cdd:TIGR01612 1678 ELDS---EIEKIEIDvDQHKKNYEIGIIEKIKEIAIANKEeIESIKELIEPTIENLISSFNT 1736
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
354-917 |
3.41e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 3.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 354 QEALKEKQQhIEQLLAERDLeRAEVAKATSHVGEIEQELALARDGHDQHVLEL-EAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:COG4913 242 EALEDAREQ-IELLEPIREL-AERYAAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 433 EEKRKVEDLQfrveeesitkgdlEQKSQISEDpenvatvseksRIMELEKDLALRVQEVAELRRRLESnkpagdvdmsls 512
Cdd:COG4913 320 ALREELDELE-------------AQIRGNGGD-----------RLEQLEREIERLERELEERERRRAR------------ 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 513 LLQEISSLQEKLEVTR---TDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEH--ANKEN--SDVI 585
Cdd:COG4913 364 LEALLAALGLPLPASAeefAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASleRRKSNipARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 586 ALwKSKLETAIASHQQAM----EELKV---------SFSKGLGT-------ETAEFAELKTQIE----KMRLDYQHEIEN 641
Cdd:COG4913 444 AL-RDALAEALGLDEAELpfvgELIEVrpeeerwrgAIERVLGGfaltllvPPEHYAAALRWVNrlhlRGRLVYERVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 642 LQNQQDSERSAHAkemeaLRAKLmkVIKEKENSlEAIKSKLDKAEDQHLVEMEETLNKLQEA------------------ 703
Cdd:COG4913 523 LPDPERPRLDPDS-----LAGKL--DFKPHPFR-AWLEAELGRRFDYVCVDSPEELRRHPRAitragqvkgngtrhekdd 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 704 ------------------EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSE--------------- 750
Cdd:COG4913 595 rrrirsryvlgfdnraklAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDeidvasaereiaele 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 751 --------GKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELqiLK 822
Cdd:COG4913 675 aelerldaSSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LE 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 823 EKFAEASEEAV------SVQRSMQETVNKLHQKEEQ-----------FNMLSSD--------------LEKLREN-LAEM 870
Cdd:COG4913 753 ERFAAALGDAVerelreNLEERIDALRARLNRAEEEleramrafnreWPAETADldadleslpeylalLDRLEEDgLPEY 832
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1622847178 871 EAKFRE-KDEREEQLIKA-KEKLENDIAEImkmsgdnSSQLTKMNDELR 917
Cdd:COG4913 833 EERFKElLNENSIEFVADlLSKLRRAIREI-------KERIDPLNDSLK 874
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
859-1764 |
4.80e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.54 E-value: 4.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 859 DLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENdiaeimkmsgdnssqltkmNDELRLKERYVE--ELQLKLTKANEN 936
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAER-------------------YQALLKEKREYEgyELLKEKEALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 937 ASFLQKSIEDMTLKAEQSQqeaaekheeekkeleRKLSDLEKKMEtshnqcqELKAGYEKATSETKTKHEEILQNLRKTL 1016
Cdd:TIGR02169 239 KEAIERQLASLEEELEKLT---------------EEISELEKRLE-------EIEQLLEELNKKIKDLGEEEQLRVKEKI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1017 LDTEDKLKGAREENSGLLQELEELRKQADKAKsltylltsakkeielmsEELRGLKSEKQLLSQEGNDLKLENGSLLSKL 1096
Cdd:TIGR02169 297 GELEAEIASLERSIAEKERELEDAEERLAKLE-----------------AEIDKLLAEIEELEREIEEERKRRDKLTEEY 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1097 VELEAKIALLQGDQQklwsvnetlnlEKEKFLEEKQDAEKHYEQEhlnKEVLAVEREKLLKEINVAQEELLKINMENDSL 1176
Cdd:TIGR02169 360 AELKEELEDLRAELE-----------EVDKEFAETRDELKDYREK---LEKLKREINELKRELDRLQEELQRLSEELADL 425
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1177 QASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLitenfilakdkDDIIQKLQSSYEELVKDQKALVQDIED 1256
Cdd:TIGR02169 426 NAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKY-----------EQELYDLKEEYDRVEKELSKLQRELAE 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1257 LTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQletdmllhdqeKLNASLQAALQVkqllrseASGLRAQ---LDD 1333
Cdd:TIGR02169 495 AEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLG-----------SVGERYATAIEV-------AAGNRLNnvvVED 556
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1334 ASKALRKAE-LETMQL-QATNTSLTKLLEEIKARRAVTDSECIQLLHE----------------KETLAASErrlLAEKE 1395
Cdd:TIGR02169 557 DAVAKEAIElLKRRKAgRATFLPLNKMRDERRDLSILSEDGVIGFAVDlvefdpkyepafkyvfGDTLVVED---IEAAR 633
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1396 ELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTS-----EKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAEREN 1470
Cdd:TIGR02169 634 RLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSrsepaELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD 713
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1471 SIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTH-IL 1549
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHsRI 793
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1550 QAKENLDAELNTCCSEKNILLRD---SLN-LQEECQKLSEEIQEMQQSLILEQEARAKEKEsslyENNQLHGRMVLLEQE 1625
Cdd:TIGR02169 794 PEIQAELSKLEEEVSRIEARLREieqKLNrLTLEKEYLEKEIQELQEQRIDLKEQIKSIEK----EIENLNGKKEELEEE 869
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1626 VEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAE-------AAQLAAHIKTLKSDFAALSKSKAELQELHSC 1698
Cdd:TIGR02169 870 LEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQiekkrkrLSELKAKLEALEEELSEIEDPKGEDEEIPEE 949
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847178 1699 lTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAK 1764
Cdd:TIGR02169 950 -ELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
352-956 |
5.09e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.51 E-value: 5.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalardghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR--------EELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 432 EEEKRKVEDLQFRVeEESITKGDLEqksqiSEDPENVAtvsekSRIMELEKDLalrvqevAELRRRLESNKPAgdvdmsl 511
Cdd:PRK02224 282 RDLRERLEELEEER-DDLLAEAGLD-----DADAEAVE-----ARREELEDRD-------EELRDRLEECRVA------- 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 512 slLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDvialwksk 591
Cdd:PRK02224 337 --AQAHNEEAESLREDADDLEERAEELRE----EAAELESELEEAREAVEDRREEIEELEEEIEELRERFGD-------- 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 592 LETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRldyqhEIENLQNQ-------QDSERSAHAKEMEALRAKl 664
Cdd:PRK02224 403 APVDLGNAEDFLEELREERDELREREAELEATLRTARERVE-----EAEALLEAgkcpecgQPVEGSPHVETIEEDRER- 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 665 mkvIKEKENSLEAIKSKLDKAEDQHlvemeETLNKLQEAEIKVKELEvlqakcnEQTKVIDNFTSQLKAT-EEKLLDLDA 743
Cdd:PRK02224 477 ---VEELEAELEDLEEEVEEVEERL-----ERAEDLVEAEDRIERLE-------ERREDLEELIAERRETiEEKRERAEE 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 744 LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGrelkLTNLQENLSEVSQVKDTLEkELQILKE 823
Cdd:PRK02224 542 LRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIES----LERIRTLLAAIADAEDEIE-RLREKRE 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 824 KFAEASEEAVSVQRSMQETVNKLHQK--EEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEImkm 901
Cdd:PRK02224 617 ALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL--- 693
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 902 sgdnssqltkmnDELRLKERYVEELQLKLTKANENASFLQKSIedMTLKAEQSQQ 956
Cdd:PRK02224 694 ------------EELRERREALENRVEALEALYDEAEELESMY--GDLRAELRQR 734
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
712-938 |
1.14e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 712 VLQAKCNEQTKVIDNFTSQLKATEEKlldLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 791
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQE---IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 792 GRELKLTNLQENLSE----VSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL 867
Cdd:COG4942 87 ELEKEIAELRAELEAqkeeLAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847178 868 AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENAS 938
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
543-1101 |
1.25e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.97 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 543 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELkvsfskglgtetaefA 622
Cdd:PRK02224 191 QLKAQIEEKEEKDLHERLNGLESELAELDEEIERYE-EQREQARETRDEADEVLEEHEERREEL---------------E 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 623 ELKTQIEKMRLDYQheienlqnQQDSERSAHAKEMEALRAKLMKVIKEKENSLEaiKSKLDKAEDQHLVEMEETLNklqe 702
Cdd:PRK02224 255 TLEAEIEDLRETIA--------ETEREREELAEEVRDLRERLEELEEERDDLLA--EAGLDDADAEAVEARREELE---- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 703 aeikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNA 778
Cdd:PRK02224 321 -----DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeeLREEAAELESELEEAREAVEDRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 779 ESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASE--EAVSVQRSMQET-----VNKLHQKEE 851
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllEAGKCPECGQPVegsphVETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 852 QFNMLSSDLEKLRENLAEMEAKFrekdEREEQLIKAKEKLENdiaeimkmSGDNSSQLTKMNDElrlKERYVEELQLKLT 931
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIER--------LEERREDLEELIAE---RRETIEEKRERAE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 932 KANENASFLQKSIEDmtlkaeqsQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEK-ATSETKTKHEEILQ 1010
Cdd:PRK02224 541 ELRERAAELEAEAEE--------KREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLlAAIADAEDEIERLR 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1011 NLRKTLLDTED----KLKGAREENSGLLQELEELRKQADKAKsltylLTSAKKEIELMSEELRGLKSEKqllsqegNDLK 1086
Cdd:PRK02224 613 EKREALAELNDerreRLAEKRERKRELEAEFDEARIEEARED-----KERAEEYLEQVEEKLDELREER-------DDLQ 680
|
570
....*....|....*
gi 1622847178 1087 LENGSLLSKLVELEA 1101
Cdd:PRK02224 681 AEIGAVENELEELEE 695
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1533-2029 |
1.36e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.04 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1533 EAQNAKKNLEKEHtHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEE----IQEMQQSLILEQEARAKEKESS 1608
Cdd:pfam05483 280 QDENLKELIEKKD-HLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEkeaqMEELNKAKAAHSFVVTEFEATT 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1609 LYENNQLHGRMVLLEQEVEELRVCTEELQsEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKS 1688
Cdd:pfam05483 359 CSLEELLRTEQQRLEKNEDQLKIITMELQ-KKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGK 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1689 KAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLaktnsh 1768
Cdd:pfam05483 438 EQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDM------ 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1769 isanLLESQNENRTLRKDKNKLTLKIRELETLQSfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1848
Cdd:pfam05483 512 ----TLELKKHQEDIINCKKQEERMLKQIENLEE-KEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKE 586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1849 ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshQKLEEERSVLN 1928
Cdd:pfam05483 587 KQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK------QKFEEIIDNYQ 660
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1929 NQlLEMKKSLPSNTLRESKFIKDADEEKASLQKSISI-TSALLTEKDAELEKLRNEVTVLRGENASAKSLH-SVVQTLES 2006
Cdd:pfam05483 661 KE-IEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKrCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYkNKEQEQSS 739
|
490 500
....*....|....*....|...
gi 1622847178 2007 DKVKLELKVKNLELQLKENKRQL 2029
Cdd:pfam05483 740 AKAALEIELSNIKAELLSLKKQL 762
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
756-1543 |
1.53e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.90 E-value: 1.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 756 EKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSV 835
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 836 QRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKmsgdnssQLTKMNDE 915
Cdd:pfam02463 278 EKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK-------ELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 916 LRLKERYVEELQLKLTKANENASFLQKSIEDmtLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYE 995
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKL--ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 996 KATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLltsaKKEIELMSEELRGLKSEK 1075
Cdd:pfam02463 429 LEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL----ELLLSRQKLEERSQKESK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1076 QLLSQEGNDLKLENG-SLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREK 1154
Cdd:pfam02463 505 ARSGLKVLLALIKDGvGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1155 LLKEINVAQEELLKINMENDSLQASKVSMqtliEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQ 1234
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDKATL----EADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1235 KLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAAL 1314
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKL 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1315 QVKQLLRSEASGLRAQLDDASKALRKAELETMQLQA-----TNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERR 1389
Cdd:pfam02463 741 LKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELaeereKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEE 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1390 LLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERE 1469
Cdd:pfam02463 821 QLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKK 900
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 1470 NSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEK 1543
Cdd:pfam02463 901 ELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGK 974
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2146-2162 |
1.57e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.57e-07
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1088-1762 |
1.81e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.90 E-value: 1.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1088 ENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELL 1167
Cdd:TIGR00618 164 EKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1168 KINMENDSLQASKVSMQTLIEELQLSKD--ALIAKTEKDQEERDhLADQIKKLITENFILA---KDKDDIIQKLQSSYEE 1242
Cdd:TIGR00618 244 YLTQKREAQEEQLKKQQLLKQLRARIEElrAQEAVLEETQERIN-RARKAAPLAAHIKAVTqieQQAQRIHTELQSKMRS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1243 LVK---------DQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAA 1313
Cdd:TIGR00618 323 RAKllmkraahvKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKEL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1314 LQVKQL------LRSEASGLRAQLDDASKA--LRKAELETMQLQATNTSLTKLLEEIKARRAVTD-SECIQLLHEKETLA 1384
Cdd:TIGR00618 403 DILQREqatidtRTSAFRDLQGQLAHAKKQqeLQQRYAELCAAAITCTAQCEKLEKIHLQESAQSlKEREQQLQTKEQIH 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1385 ASERRLLAEKEELLSENRIITEKLHK-CSEEAAHTEMSLN------------EKITYLTSEKEMASQKMTKLKKHQDSLl 1451
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEEPCPLCGsCIHPNPARQDIDNpgpltrrmqrgeQTYAQLETSEEDVYHQLTSERKQRASL- 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1452 KEKSALETQNGVLLAERENSIKAIGDLKRQCDQESanrRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLML 1531
Cdd:TIGR00618 562 KEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRL---QDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCS 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1532 KEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSL--NLQEECQKLSEEIQEMQQSLILEQEARAKEKESSL 1609
Cdd:TIGR00618 639 QELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLAlqKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1610 YEN---NQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALS 1686
Cdd:TIGR00618 719 EFNeieNASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDT 798
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847178 1687 KSKAELQELHSclTKILDDLQLnHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQL 1762
Cdd:TIGR00618 799 HLLKTLEAEIG--QEIPSDEDI-LNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKI 871
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1117-2073 |
2.15e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 2.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1117 NETLNLEK-EKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASK--VSMQTLIEELQLS 1193
Cdd:PTZ00121 1021 NQNFNIEKiEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEdnRADEATEEAFGKA 1100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1194 KDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDN 1273
Cdd:PTZ00121 1101 EEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEA 1180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1274 TCIALKVERDNALQNNRDLQLETDMLLHDQEKL---------NASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELE 1344
Cdd:PTZ00121 1181 ARKAEEVRKAEELRKAEDARKAEAARKAEEERKaeearkaedAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEA 1260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1345 TMQLQATNTSLTKLLEEIKARRAVTDSEciqlLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNE 1424
Cdd:PTZ00121 1261 RMAHFARRQAAIKAEEARKADELKKAEE----KKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKK 1336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1425 KITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQngvllaeRENSIKAIGDLKRQCDQESanrriivqenmkllgNID 1504
Cdd:PTZ00121 1337 KAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK-------KEEAKKKADAAKKKAEEKK---------------KAD 1394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1505 ALKKELQERKNENQELvaskcdlslmlKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKnillrdslnlQEECQKLS 1584
Cdd:PTZ00121 1395 EAKKKAEEDKKKADEL-----------KKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK----------ADEAKKKA 1453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1585 EEIQEMQQsliLEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKfvllQEKTKSEqevaeiieekELL 1664
Cdd:PTZ00121 1454 EEAKKAEE---AKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA----EAKKKAD----------EAK 1516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1665 TAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKIlDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKE 1744
Cdd:PTZ00121 1517 KAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKA-EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1745 KEMLAESYFILQKEISQLAKTNSHISANLLESQNENRtlrkdKNKLTLKIRELETLQSFTAAQTAEDAMQI-MEQMTKEK 1823
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEK-----KKVEQLKKKEAEEKKKAEELKKAEEENKIkAAEEAKKA 1670
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1824 TETLASLEDTK--QTNAKLQNELDTLKENNLKNVEELNKSKElltVENQKMEEFRKEIETLKQaaaqKSQQLSALQEENV 1901
Cdd:PTZ00121 1671 EEDKKKAEEAKkaEEDEKKAAEALKKEAEEAKKAEELKKKEA---EEKKKAEELKKAEEENKI----KAEEAKKEAEEDK 1743
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1902 KLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASlqKSISITSALLTEKDAELEKLR 1981
Cdd:PTZ00121 1744 KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI--KDIFDNFANIIEGGKEGNLVI 1821
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1982 NEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRqlSSSSGNTDTQADEDERAQESqQMIDFLNSVIV 2061
Cdd:PTZ00121 1822 NDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKE--ADFNKEKDLKEDDEEEIEEA-DEIEKIDKDDI 1898
|
970
....*....|..
gi 1622847178 2062 DLQRKNQDLKMK 2073
Cdd:PTZ00121 1899 EREIPNNNMAGK 1910
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1421-1883 |
2.63e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.18 E-value: 2.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1421 SLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQngvLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKll 1500
Cdd:TIGR04523 208 KKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTE---ISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKK-- 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1501 gnIDALKKELQERKNENQELVASK-CDLSLMLK-EAQNAKKNLEKEHTHILQAKENLDaELNtccSEKNILLRDSLNLQE 1578
Cdd:TIGR04523 283 --IKELEKQLNQLKSEISDLNNQKeQDWNKELKsELKNQEKKLEEIQNQISQNNKIIS-QLN---EQISQLKKELTNSES 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1579 ECQKLSEEIQEMQQSLILEQearaKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEII 1658
Cdd:TIGR04523 357 ENSEKQRELEEKQNEIEKLK----KENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1659 EEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEK 1738
Cdd:TIGR04523 433 ETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1739 DELLKEKEMLAESYFILQKEISQLAKTNSHISANL--LESQNENRTLRKDKNKLTLKIREL-ETLQSFTAAQTAEDamQI 1815
Cdd:TIGR04523 513 KDLTKKISSLKEKIEKLESEKKEKESKISDLEDELnkDDFELKKENLEKEIDEKNKEIEELkQTQKSLKKKQEEKQ--EL 590
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 1816 MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLK 1883
Cdd:TIGR04523 591 IDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
751-1594 |
3.12e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.89 E-value: 3.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 751 GKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElqgrelKLTNLQENLSEVSQVKDTLEKelqiLKEKFAEASE 830
Cdd:pfam15921 72 GKEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQ------SVIDLQTKLQEMQMERDAMAD----IRRRESQSQE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 831 EavsVQRSMQETVNKLHQ----KEEQFNMLSSDLEKLRENLAEMEAKFRE-----KDEREEQLIKAKEKLENDIAEIMKM 901
Cdd:pfam15921 142 D---LRNQLQNTVHELEAakclKEDMLEDSNTQIEQLRKMMLSHEGVLQEirsilVDFEEASGKKIYEHDSMSTMHFRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 902 SGDNSSQLTKMNDELR-LKERYV---EELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLE 977
Cdd:pfam15921 219 GSAISKILRELDTEISyLKGRIFpveDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 978 KKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLkgareensgllqelEELRKQadkaksltylltsa 1057
Cdd:pfam15921 299 SQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKI--------------EELEKQ-------------- 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1058 kkeIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDaeKH 1137
Cdd:pfam15921 351 ---LVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDD--RN 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1138 YEQEHLNKEVLAV------EREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALiaktekDQEERDhL 1211
Cdd:pfam15921 426 MEVQRLEALLKAMksecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTL------ESSERT-V 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1212 ADQIKKLitenfilaKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKksalEKLSNLDNTCIALKV---ERDNALQN 1288
Cdd:pfam15921 499 SDLTASL--------QEKERAIEATNAEITKLRSRVDLKLQELQHLKNEG----DHLRNVQTECEALKLqmaEKDKVIEI 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1289 NRDlQLETDMLLHDQEKLNAslqAALQVKqllrseasglRAQLDdasKALRKAELETMQLQATNTSLTKLLEEIKARRAV 1368
Cdd:pfam15921 567 LRQ-QIENMTQLVGQHGRTA---GAMQVE----------KAQLE---KEINDRRLELQEFKILKDKKDAKIRELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1369 TDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKitylTSEKEMASQKMT-KLKKHQ 1447
Cdd:pfam15921 630 LELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNK----SEEMETTTNKLKmQLKSAQ 705
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1448 DSLLKEKSALETQNGvllaERENSIKAIGDLKRQCdqeSANRriivqenmkllGNIDALKKELQerknenqelvaskcdl 1527
Cdd:pfam15921 706 SELEQTRNTLKSMEG----SDGHAMKVAMGMQKQI---TAKR-----------GQIDALQSKIQ---------------- 751
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 1528 slMLKEAQNakkNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSL 1594
Cdd:pfam15921 752 --FLEEAMT---NANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVAL 813
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
687-1456 |
3.42e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 56.00 E-value: 3.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 687 DQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNfTSQLKATEEK--LLDLDALQKASSEgKSEMEKLRQQLEA 764
Cdd:pfam12128 175 ESPLRHIDKIAKAMHSKEGKFRDVKSMIVAILEDDGVVPP-KSRLNRQQVEhwIRDIQAIAGIMKI-RPEFTKLQQEFNT 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 765 AEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL----SEVSQVKDTLEKELQILKEKFAEASEEAVSVQ---- 836
Cdd:pfam12128 253 LESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLrtldDQWKEKRDELNGELSAADAAVAKDRSELEALEdqhg 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 837 RSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR---EKDEREEQLIKA---------KEKLENDIAEIMKMSGD 904
Cdd:pfam12128 333 AFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQdvtAKYNRRRSKIKEqnnrdiagiKDKLAKIREARDRQLAV 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 905 NSSQLTKMNDELRlkeryvEELQLKLTKANENASFLQKSIEDMTLKAEQSQqeaaekheeekkelerKLSDLEKKMETSH 984
Cdd:pfam12128 413 AEDDLQALESELR------EQLEAGKLEFNEEEYRLKSRLGELKLRLNQAT----------------ATPELLLQLENFD 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 985 NQCQELKAGYEKATSETKTKHEEILQnLRKTLLDTEDKLKGAREENSGLLQELEELRKQAD-KAKSLTYLLtsaKKEIEL 1063
Cdd:pfam12128 471 ERIERAREEQEAANAEVERLQSELRQ-ARKRRDQASEALRQASRRLEERQSALDELELQLFpQAGTLLHFL---RKEAPD 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1064 MSEELRGLKSEKQLLSQEgNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHL 1143
Cdd:pfam12128 547 WEQSIGKVISPELLHRTD-LDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEE 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1144 NKEVLAVEREKLLKEinvaqEELLKINMENDSLQASKVSMQTLIEELQLSKdALIAKTEKDQEERDHLADQIKKLITENF 1223
Cdd:pfam12128 626 QLVQANGELEKASRE-----ETFARTALKNARLDLRRLFDEKQSEKDKKNK-ALAERKDSANERLNSLEAQLKQLDKKHQ 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1224 ILAKDKDDiiQKLQSSYEELVKdQKALVQDIEDLTAEKKSALEKL-SNLDNTCIALKVERDNAL-------QNNRDLQLE 1295
Cdd:pfam12128 700 AWLEEQKE--QKREARTEKQAY-WQVVEGALDAQLALLKAAIAARrSGAKAELKALETWYKRDLaslgvdpDVIAKLKRE 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1296 TDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLddaskALRKAELETMQLQaTNTSLTKLLEEIKARRAvtdseciQ 1375
Cdd:pfam12128 777 IRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRL-----ATQLSNIERAISE-LQQQLARLIADTKLRRA-------K 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1376 LLHEKETLAASERRLLAEKEELLSE-NRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEK 1454
Cdd:pfam12128 844 LEMERKASEKQQVRLSENLRGLRCEmSKLATLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADH 923
|
..
gi 1622847178 1455 SA 1456
Cdd:pfam12128 924 SG 925
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1689-1998 |
4.25e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 4.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1689 KAELQELHSCLTKILDDlqlNHEVTLAEKAQVMQDNQNLLAEKSEmmlEKDELLKEKEMLAESYFILQKEISQLAKTNSH 1768
Cdd:COG1196 219 KEELKELEAELLLLKLR---ELEAELEELEAELEELEAELEELEA---ELAELEAELEELRLELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1769 ISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQImEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1848
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL-EELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1849 ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLN 1928
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1929 NQLLEmkkslpsNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLH 1998
Cdd:COG1196 452 AELEE-------EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1728-2076 |
4.96e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.47 E-value: 4.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1728 LAEKSEMMLEKDELLKEKEMLAESYFILQkeiSQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAq 1807
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLR---ETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELA- 880
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1808 taedamqimEQMTKEKTETLASLEDTKQTNAKLQNEL---------DTLKENNLKNvEELNKSKELLT---VENQKMEEF 1875
Cdd:COG5022 881 ---------ERQLQELKIDVKSISSLKLVNLELESEIielkkslssDLIENLEFKT-ELIARLKKLLNnidLEEGPSIEY 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1876 RK-----EIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLR------ 1944
Cdd:COG5022 951 VKlpelnKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEvaelqs 1030
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1945 ESKFIKDADEEKASLQKSISITSALLtekdAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKL-ELKVKNLELqlk 2023
Cdd:COG5022 1031 ASKIISSESTELSILKPLQKLKGLLL----LENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLkTINVKDLEV--- 1103
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1622847178 2024 eNKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEM 2076
Cdd:COG5022 1104 -TNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLE 1155
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1095-1972 |
5.46e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 55.36 E-value: 5.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1095 KLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMEND 1174
Cdd:pfam02463 168 KRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLR 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1175 SLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDI 1254
Cdd:pfam02463 248 DEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1255 EDLTAEKKSALEKLsnldntcIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDA 1334
Cdd:pfam02463 328 KELKKEKEEIEELE-------KELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1335 SKALRKAELEtMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEE 1414
Cdd:pfam02463 401 SEEEKEAQLL-LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQL 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1415 AAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQ 1494
Cdd:pfam02463 480 VKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADE 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1495 ENMKLLgNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSL 1574
Cdd:pfam02463 560 VEERQK-LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLK 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1575 NLQEECQKLSEEIQEMQQSLILEQEARAKEKES-SLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQE 1653
Cdd:pfam02463 639 ESAKAKESGLRKGVSLEEGLAEKSEVKASLSELtKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1654 VAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSE 1733
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKA 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1734 MMLEKDELLKEKEMLAESYFILQKEISQL-AKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDA 1812
Cdd:pfam02463 799 QEEELRALEEELKEEAELLEEEQLLIEQEeKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEE 878
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1813 MQIMEQMTKEKTETLASLEDTKQTNAKLQnELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQ 1892
Cdd:pfam02463 879 LEEQKLKDELESKEEKEKEEKKELEEESQ-KLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEE 957
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1893 lsalQEENVKLAEelgrsrdevtshQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTE 1972
Cdd:pfam02463 958 ----EEERNKRLL------------LAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKE 1021
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
859-1519 |
6.03e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.07 E-value: 6.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 859 DLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENAS 938
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 939 FLQKSiedmtlkaeqsqqeaaekheeekkelERKLSDLEKKMEtshnqcqelkagyekatsetktKHEEILQNLRKTLLD 1018
Cdd:PRK03918 239 EIEEL--------------------------EKELESLEGSKR----------------------KLEEKIRELEERIEE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1019 TEDKLKgAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVE 1098
Cdd:PRK03918 271 LKKEIE-ELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKE 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1099 LEAKIALLQGDQQKLWSVnetlnLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKllKEInvaQEELLKINMENDSLQA 1178
Cdd:PRK03918 350 LEKRLEELEERHELYEEA-----KAKKEELERLKKRLTGLTPEKLEKELEELEKAK--EEI---EEEISKITARIGELKK 419
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1179 SKVSMQTLIEELQLSKDAL-IAKTEKDQEERDHLADQIKKLITEnfiLAKDKDDIIQKLQSSYEELVKDQKALVQDIEDL 1257
Cdd:PRK03918 420 EIKELKKAIEELKKAKGKCpVCGRELTEEHRKELLEEYTAELKR---IEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1258 TaeKKSALEKLSNLDNTCIALKVERdnaLQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKa 1337
Cdd:PRK03918 497 K--LKELAEQLKELEEKLKKYNLEE---LEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEE- 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1338 lRKAELETMQLQATNTSLTKLLEEIKarravtdsECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAH 1417
Cdd:PRK03918 571 -ELAELLKELEELGFESVEELEERLK--------ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKR 641
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1418 TEMSLNE----KITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQngvllaeRENSIKAIGDLKRQCDQ-ESANRRII 1492
Cdd:PRK03918 642 LEELRKEleelEKKYSEEEYEELREEYLELSRELAGLRAELEELEKR-------REEIKKTLEKLKEELEErEKAKKELE 714
|
650 660
....*....|....*....|....*..
gi 1622847178 1493 VQEnmKLLGNIDALKKELQERKNENQE 1519
Cdd:PRK03918 715 KLE--KALERVEELREKVKKYKALLKE 739
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
753-956 |
7.22e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 7.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 753 SEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEA 832
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 833 VSVQRSMQETVNKLHQKEEQ----FNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 908
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622847178 909 LTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 956
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1290-2045 |
9.27e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.35 E-value: 9.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1290 RDLQ--LETDMLLHDQEKLN-----ASLQAALQVKQLLRSEASGLRAQLDDASKALRKaeletmQLQATntsltklLEEI 1362
Cdd:pfam15921 88 KDLQrrLNESNELHEKQKFYlrqsvIDLQTKLQEMQMERDAMADIRRRESQSQEDLRN------QLQNT-------VHEL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1363 KARRAVTDSeciqLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNekITYLTSEKEMASQKMTK 1442
Cdd:pfam15921 155 EAAKCLKED----MLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMS--TMHFRSLGSAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1443 LKKHQDSLLKEKSALETQNGVLLAERENSIKAIgdLKRQCDQEsanRRIIVQENMKLLG-------------NIDALKKE 1509
Cdd:pfam15921 229 LDTEISYLKGRIFPVEDQLEALKSESQNKIELL--LQQHQDRI---EQLISEHEVEITGltekassarsqanSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1510 LQER-KNENQELVASKCDL----SLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLS 1584
Cdd:pfam15921 304 IQEQaRNQNSMYMRQLSDLestvSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLL 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1585 EEIQEMQQSLILEQEARAKEKESSLYEN---NQLHGRMVLLEQEVEELRVCTEELQSE-------KFVLLQEKTKSEQEV 1654
Cdd:pfam15921 384 ADLHKREKELSLEKEQNKRLWDRDTGNSitiDHLRRELDDRNMEVQRLEALLKAMKSEcqgqmerQMAAIQGKNESLEKV 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1655 ----AEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQE-------LHSCLTKILD--DLQLNHEVTLAEKAQVM 1721
Cdd:pfam15921 464 ssltAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEkeraieaTNAEITKLRSrvDLKLQELQHLKNEGDHL 543
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1722 QDNQNLLAEKSEMMLEKDELLKekemlaesyfILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQ 1801
Cdd:pfam15921 544 RNVQTECEALKLQMAEKDKVIE----------ILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILK 613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1802 SFTAAQTAEDAMQIME------QMTKEKTETLASLEDTKQTNAKLQNELDTLKeNNLKNVEE---------LNKSKELLT 1866
Cdd:pfam15921 614 DKKDAKIRELEARVSDlelekvKLVNAGSERLRAVKDIKQERDQLLNEVKTSR-NELNSLSEdyevlkrnfRNKSEEMET 692
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1867 VENQKMEEFRKEIETLKQAAaQKSQQLSALQEENVKLAeeLGRSRDEVTSHQKLEEERSVLnnQLLEMKKSlpsNTLRES 1946
Cdd:pfam15921 693 TTNKLKMQLKSAQSELEQTR-NTLKSMEGSDGHAMKVA--MGMQKQITAKRGQIDALQSKI--QFLEEAMT---NANKEK 764
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1947 KFIKdadEEKASLQKSISITSallTEKDaeleKLRNEVTVLRgenasakslhsvvqtleSDKVKLELKVKNLELQLKENK 2026
Cdd:pfam15921 765 HFLK---EEKNKLSQELSTVA---TEKN----KMAGELEVLR-----------------SQERRLKEKVANMEVALDKAS 817
|
810
....*....|....*....
gi 1622847178 2027 RQLSSSSGNTDTQADEDER 2045
Cdd:pfam15921 818 LQFAECQDIIQRQEQESVR 836
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
566-1315 |
1.43e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.90 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 566 ENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAM-------EELKVSFSKGLgtETAEFAELKTQIEKMRLDYQHE 638
Cdd:TIGR00606 124 EKVSLSSKCAEIDREMISHLGVSKAVLNNVIFCHQEDSnwplsegKALKQKFDEIF--SATRYIKALETLRQVRQTQGQK 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 639 IENLQN-----QQDSERSAHAKEM----EALRAKLMKVIKEKENSLEAIKSKLDKAEDQ--HLVEMEETLNKLQE----- 702
Cdd:TIGR00606 202 VQEHQMelkylKQYKEKACEIRDQitskEAQLESSREIVKSYENELDPLKNRLKEIEHNlsKIMKLDNEIKALKSrkkqm 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 703 ----AEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLdalqkassegKSEMEKLRQQLEAAEKQIKHLEIEKNA 778
Cdd:TIGR00606 282 ekdnSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDC----------QRELEKLNKERRLLNQEKTELLVEQGR 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 779 ESSKASSITRELQGRELKLTNLQENLsEVSQVKDTLEKELQI---LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnm 855
Cdd:TIGR00606 352 LQLQADRHQEHIRARDSLIQSLATRL-ELDGFERGPFSERQIknfHTLVIERQEDEAKTAAQLCADLQSKERLKQEQ--- 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 856 lssdLEKLREnlaEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGdNSSQLTKMNDELRLKERyveelqlKLTKANE 935
Cdd:TIGR00606 428 ----ADEIRD---EKKGLGRTIELKKEILEKKQEELKFVIKELQQLEG-SSDRILELDQELRKAER-------ELSKAEK 492
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 936 NASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKME-------TSHNQCQELKA-GYEKATSET-----K 1002
Cdd:TIGR00606 493 NSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEmltkdkmDKDEQIRKIKSrHSDELTSLLgyfpnK 572
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1003 TKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADK-----------------AKSLTYLLTSAKKEIELMS 1065
Cdd:TIGR00606 573 KQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESkeeqlssyedklfdvcgSQDEESDLERLKEEIEKSS 652
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1066 EELRGLKSEKQLLSQEGNDLKLENGS---LLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKqdaEKHYEQEH 1142
Cdd:TIGR00606 653 KQRAMLAGATAVYSQFITQLTDENQSccpVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKK---EKRRDEML 729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1143 LNKEVLAVEREKLLKEINVAQEELLKINME----NDSLQASKVSMQTLIEELQLSKDAL--------------------- 1197
Cdd:TIGR00606 730 GLAPGRQSIIDLKEKEIPELRNKLQKVNRDiqrlKNDIEEQETLLGTIMPEEESAKVCLtdvtimerfqmelkdverkia 809
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1198 --------------IAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKS 1263
Cdd:TIGR00606 810 qqaaklqgsdldrtVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQ 889
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1264 ALEKLSNLDNTCIALKVERDNAL---QNNRDLQLETDMLLHDQEKLNASLQAALQ 1315
Cdd:TIGR00606 890 LVELSTEVQSLIREIKDAKEQDSpleTFLEKDQQEKEELISSKETSNKKAQDKVN 944
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
345-1113 |
2.12e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.19 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAE-VAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADRE 423
Cdd:pfam05483 42 QKLNFLPMLEQVANSGDCHYQEGLKDSDFENSEgLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 424 KVELlnQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEK--------DLALRVQEVAELR 495
Cdd:pfam05483 122 IQEL--QFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEReetrqvymDLNNNIEKMILAF 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 496 RRLESNKPAGDVDMSLSLLQE---ISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKS 572
Cdd:pfam05483 200 EELRVQAENARLEMHFKLKEDhekIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 573 KLEHANKENSDVIALWKSkletaiashqqaMEELKVSFSKGLGTETAEFAELKTQIEKMrldyqheienlqNQQDSERSA 652
Cdd:pfam05483 280 QDENLKELIEKKDHLTKE------------LEDIKMSLQRSMSTQKALEEDLQIATKTI------------CQLTEEKEA 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 653 HAKEMEALRAKLMKVIKEKENSLEAIKSKLdKAEDQHLVEMEETLNKL-QEAEIKVKELEVLQAKCNEQTKVIDNFTSQL 731
Cdd:pfam05483 336 QMEELNKAKAAHSFVVTEFEATTCSLEELL-RTEQQRLEKNEDQLKIItMELQKKSSELEEMTKFKNNKEVELEELKKIL 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 732 KATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAE-------SSKASSITRELQGRELKLTNLQENL 804
Cdd:pfam05483 415 AEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIktseehyLKEVEDLKTELEKEKLKNIELTAHC 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 805 SEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQL 884
Cdd:pfam05483 495 DKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEEN 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 885 IKAKEKLENDIAEIMKMSGDNSSQLTKmndELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQsqqeaaekhee 964
Cdd:pfam05483 575 ARSIEYEVLKKEKQMKILENKCNNLKK---QIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK----------- 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 965 ekkelerklsdLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQA 1044
Cdd:pfam05483 641 -----------LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALM 709
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1045 DKAKSltylltSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKL 1113
Cdd:pfam05483 710 EKHKH------QYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKL 772
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
976-1591 |
2.12e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.10 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 976 LEKKMETSHNqcqelkagyekatsETKTKhEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELR----KQADKAKSLT 1051
Cdd:TIGR04523 38 LEKKLKTIKN--------------ELKNK-EKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNdklkKNKDKINKLN 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1052 YLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEK 1131
Cdd:TIGR04523 103 SDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1132 QDAEKHYEQ---EHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQL----SKDALIAKTEKD 1204
Cdd:TIGR04523 183 LNIQKNIDKiknKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTeisnTQTQLNQLKDEQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1205 QEERDHLADQIKKLITENFILaKDKDDIIQKLQSSYEEL--------VKDQKALVQDIEDLTAEKKSAL----EKLSNLD 1272
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQNNKKI-KELEKQLNQLKSEISDLnnqkeqdwNKELKSELKNQEKKLEEIQNQIsqnnKIISQLN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1273 NTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATN 1352
Cdd:TIGR04523 342 EQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1353 TSLTKLLEEIKARRAVTDSECIQL---LHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYL 1429
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLtnqDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1430 TSEKEMASQKMTKLKKHQDSLLKEKSALETQngvlLAERENSIKAIGDLKRQCDQEsanrriivQENMKLLGNIDALKKE 1509
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESE----KKEKESKISDLEDELNKDDFE--------LKKENLEKEIDEKNKE 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1510 LQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQE 1589
Cdd:TIGR04523 570 IEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
..
gi 1622847178 1590 MQ 1591
Cdd:TIGR04523 650 IK 651
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
796-1367 |
2.13e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.14 E-value: 2.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 796 KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEA--- 872
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEElke 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 873 KFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMND------ELRLKERYVEELQLKLTKANENASFLQKSIED 946
Cdd:PRK03918 239 EIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEkvkelkELKEKAEEYIKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 947 MTLKAE--QSQQEAAEKHEEEKKELERKLSDLEKK---METSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTED 1021
Cdd:PRK03918 319 LEEEINgiEERIKELEEKEERLEELKKKLKELEKRleeLEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1022 KLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGlKSEKQLLSQEGNDLKlengSLLSKLVELEA 1101
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTE-EHRKELLEEYTAELK----RIEKELKEIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1102 KIALLQGDQQKLwsvnETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASkv 1181
Cdd:PRK03918 474 KERKLRKELREL----EKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKE-- 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1182 smqtlIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELV------KDQKALVQDIE 1255
Cdd:PRK03918 548 -----LEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLelkdaeKELEREEKELK 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1256 DLTAEKKSALEKLSNLDNTCIALKVERDNALQN-NRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDA 1334
Cdd:PRK03918 623 KLEEELDKAFEELAETEKRLEELRKELEELEKKySEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEE 702
|
570 580 590
....*....|....*....|....*....|...
gi 1622847178 1335 SKALRKAELETMQLQATNTSLTKLLEEIKARRA 1367
Cdd:PRK03918 703 LEEREKAKKELEKLEKALERVEELREKVKKYKA 735
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1191-1538 |
2.27e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 52.59 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1191 QLSKDALIAKTEKDQEERDH--LADQIKKLITEnfilAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKL 1268
Cdd:pfam07888 56 QREKEKERYKRDREQWERQRreLESRVAELKEE----LRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARI 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1269 SNLDNTCIAL---KVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQllrSEASGLRAQLDDASKALRKAELET 1345
Cdd:pfam07888 132 RELEEDIKTLtqrVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTE---EELRSLSKEFQELRNSLAQRDTQV 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1346 MQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLS----ENRIITEkLHKCSEEAAHTEMS 1421
Cdd:pfam07888 209 LQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSmaaqRDRTQAE-LHQARLQAAQLTLQ 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1422 LNEKITYLTSEKEMASQKMTKL----KKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENM 1497
Cdd:pfam07888 288 LADASLALREGRARWAQERETLqqsaEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQ 367
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1622847178 1498 KLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAK 1538
Cdd:pfam07888 368 ELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLETVADAK 408
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1421-2026 |
3.18e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.33 E-value: 3.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1421 SLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLL 1500
Cdd:TIGR04523 72 NSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1501 GNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHT---HILQAKENLDAELNTCCSEKNILLRDSLNLQ 1577
Cdd:TIGR04523 152 KELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLkleLLLSNLKKKIQKNKSLESQISELKKQNNQLK 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1578 EECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQ----- 1652
Cdd:TIGR04523 232 DNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdwnke 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1653 ---EVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLA 1729
Cdd:TIGR04523 312 lksELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLES 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1730 EKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELEtlqsftaaQTA 1809
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLD--------NTR 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1810 EDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNlKNVEELNKskelltVENQKMEEFRKEIETLKQAAAQK 1889
Cdd:TIGR04523 464 ESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEK-KELEEKVK------DLTKKISSLKEKIEKLESEKKEK 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1890 SQQLSALQEENVKLAEELGRSrdevtshqKLEEERSVLNNQLLEMK---KSLPSNTLRESKFIKDADEEKASLQKSISIT 1966
Cdd:TIGR04523 537 ESKISDLEDELNKDDFELKKE--------NLEKEIDEKNKEIEELKqtqKSLKKKQEEKQELIDQKEKEKKDLIKEIEEK 608
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1967 SALLTEKDAELEKLRNEvtvlrgenasAKSLHSVVQTLESDKVKLELKVKNLELQLKENK 2026
Cdd:TIGR04523 609 EKKISSLEKELEKAKKE----------NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1570-2024 |
4.11e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.35 E-value: 4.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1570 LRDSLN-LQEECQKLSEEIQEMQqslilEQEARAKEK----ESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLL 1644
Cdd:PRK02224 204 LHERLNgLESELAELDEEIERYE-----EQREQARETrdeaDEVLEEHEERREELETLEAEIEDLRETIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1645 QEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQElhSCLTKILDDLQLNHEV-TLAEKAQVMQD 1723
Cdd:PRK02224 279 EEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRD--RLEECRVAAQAHNEEAeSLREDADDLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1724 NQNLLAEK-----SEMMLEKDELLKEKEMLAEsyfiLQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELE 1798
Cdd:PRK02224 357 RAEELREEaaeleSELEEAREAVEDRREEIEE----LEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1799 -TLQsfTAAQTAEDAMQIMEQ-------MTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQ 1870
Cdd:PRK02224 433 aTLR--TARERVEEAEALLEAgkcpecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDR 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1871 --KMEEFRKEIETL----KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS-HQKLEEERSV---LNNQLLEMKKSLPS 1940
Cdd:PRK02224 511 ieRLEERREDLEELiaerRETIEEKRERAEELRERAAELEAEAEEKREAAAEaEEEAEEAREEvaeLNSKLAELKERIES 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1941 -NTLRES-KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKslhsvVQTLESDKVKLELKVKNL 2018
Cdd:PRK02224 591 lERIRTLlAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR-----IEEAREDKERAEEYLEQV 665
|
....*.
gi 1622847178 2019 ELQLKE 2024
Cdd:PRK02224 666 EEKLDE 671
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
802-1915 |
5.19e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 5.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 802 ENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDERE 881
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 882 EQLIKAKEKLENDIAEImkmsgdnssqltkmndELRLKERYVEELQLKLTKANENASFlqKSIEDMTLKAEQSQQEAAEK 961
Cdd:pfam01576 92 QQLQNEKKKMQQHIQDL----------------EEQLDEEEAARQKLQLEKVTTEAKI--KKLEEDILLLEDQNSKLSKE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 962 HEEEKKELERKLSDLEKKMETSHNqCQELKAGYEKATSETK---TKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELE 1038
Cdd:pfam01576 154 RKLLEERISEFTSNLAEEEEKAKS-LSKLKNKHEAMISDLEerlKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1039 ELRKQAdkaksltylltsAKKEIELMSEELRglksekqlLSQEGNDlkleNGSLLSKLVELEAKIALLQGDqqklwsvne 1118
Cdd:pfam01576 233 ELRAQL------------AKKEEELQAALAR--------LEEETAQ----KNNALKKIRELEAQISELQED--------- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1119 tlnLEKEKFLEEKQDAEKHYEQEHLnkEVLAVEREKLLKEINVAQEELLKINMENDSLQaskvsmQTLIEELQLSKDALI 1198
Cdd:pfam01576 280 ---LESERAARNKAEKQRRDLGEEL--EALKTELEDTLDTTAAQQELRSKREQEVTELK------KALEEETRSHEAQLQ 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1199 AKTEKDQEERDHLADQIKKLITENFILAKDKddiiQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIAL 1278
Cdd:pfam01576 349 EMRQKHTQALEELTEQLEQAKRNKANLEKAK----QALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSES 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1279 KVERDNALQNNRDLQLETdmllhdqEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKaelETMQLQATNTSLTKL 1358
Cdd:pfam01576 425 ERQRAELAEKLSKLQSEL-------ESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQE---ETRQKLNLSTRLRQL 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1359 LEEIKARRAvtdseciQLLHEKETLAASERRLLAEKEELLsenriiteKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQ 1438
Cdd:pfam01576 495 EDERNSLQE-------QLEEEEEAKRNVERQLSTLQAQLS--------DMKKKLEEDAGTLEALEEGKKRLQRELEALTQ 559
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1439 KMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDL---KRQCDQESANRRIIVQENMKllgniDALKKELQERKN 1515
Cdd:pfam01576 560 QLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLekkQKKFDQMLAEEKAISARYAE-----ERDRAEAEAREK 634
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1516 ENQELvaskcDLSLMLKEAQNAKKNLEKehthilqAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLI 1595
Cdd:pfam01576 635 ETRAL-----SLARALEEALEAKEELER-------TNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLE 702
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1596 -LEQEARAKEKESSLYENN----------QLHGR-------MVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEI 1657
Cdd:pfam01576 703 eLEDELQATEDAKLRLEVNmqalkaqferDLQARdeqgeekRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKEL 782
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1658 ieEKELLTAEAAQLAAhIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAE---KSEM 1734
Cdd:pfam01576 783 --EAQIDAANKGREEA-VKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASeraRRQA 859
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1735 MLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSF--TAAQTAEDA 1812
Cdd:pfam01576 860 QQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAerSTSQKSESA 939
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1813 MQIMEQMTKEKTETLASLEDT-----KQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAA 1887
Cdd:pfam01576 940 RQQLERQNKELKAKLQEMEGTvkskfKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHAD 1019
|
1130 1140
....*....|....*....|....*...
gi 1622847178 1888 QKSQQLSALQEENVKLAEELGRSRDEVT 1915
Cdd:pfam01576 1020 QYKDQAEKGNSRMKQLKRQLEEAEEEAS 1047
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
626-1265 |
5.75e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 52.00 E-value: 5.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 626 TQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIK--SKLDKAE--DQHLVEMEETLNKLQ 701
Cdd:COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKrfSLLKKETiyLQSAQRVELAERQLQ 885
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 702 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDL-DALQKASSEGKSEME----KLRQQLEAAEKQ 768
Cdd:COG5022 886 ELKIDVKSISSLKLVNLELESEIIELKKSLSSDLienlefktELIARLkKLLNNIDLEEGPSIEyvklPELNKLHEVESK 965
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 769 IKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQ 848
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSIL 1045
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 849 KEEQfnmlssDLEKLrenlaeMEAKFREKDEREEQLIKAKEKLENDIAEIMKMsgdnssqltkmndelrlkeRYVEELQL 928
Cdd:COG5022 1046 KPLQ------KLKGL------LLLENNQLQARYKALKLRRENSLLDDKQLYQL-------------------ESTENLLK 1094
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 929 KLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEI 1008
Cdd:COG5022 1095 TINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF 1174
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1009 LQNLRKTLLD---TEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDL 1085
Cdd:COG5022 1175 AALSEKRLYQsalYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNNLNKKFDTPA 1254
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1086 KLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLE-----------KEKFLEEKQDAEKHYEQEHLnkevlavEREK 1154
Cdd:COG5022 1255 SMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYinvglfnalrtKASSLRWKSATEVNYNSEEL-------DDWC 1327
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1155 LLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLAdqiKKLITENFILAKDKDD-II 1233
Cdd:COG5022 1328 REFEISDVDEELEELIQAVKVLQLLKDDLNKLDELLDACYSLNPAEIQNLKSRYDPAD---KENNLPKEILKKIEALlIK 1404
|
650 660 670
....*....|....*....|....*....|..
gi 1622847178 1234 QKLQSSYEELVKDQKALvqdiEDLTAEKKSAL 1265
Cdd:COG5022 1405 QELQLSLEGKDETEVHL----SEIFSEEKSLI 1432
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
796-1025 |
5.96e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 5.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 796 KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR 875
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 876 EKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERY----VEELQLKLTKANENASFLQKSIEDMTlKA 951
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPArreqAEELRADLAELAALRAELEAERAELE-AL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 952 EQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKG 1025
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-982 |
6.29e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 6.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 352 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELE----AELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 432 EEEKRKVEDLQFRVEEESITKGDLEQKSQisedpenvatvSEKSRIMELEKDLALRVQEVAELRRRLESNKPAgdVDMSL 511
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLE-----------ELEEELAELEEELEELEEELEELEEELEEAEEE--LEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 512 SLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSK 591
Cdd:COG1196 358 AELAEAEEALLEAEAELAEAEEELEELAE----ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 592 LETAIASHQQAMEELKvsfskglgtETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEmEALRAKLMKVIKEK 671
Cdd:COG1196 434 EEEEEEEEEALEEAAE---------EEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA-AARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 672 ENSLEAIKSKLDKAEDQHL---VEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKAS 748
Cdd:COG1196 504 EGFLEGVKAALLLAGLRGLagaVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 749 SEGKSEMEKLRQQLEAAEKQIKHLEIEknaesskASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEA 828
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLRE-------ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGG 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 829 SEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 908
Cdd:COG1196 657 SAGGSLTGGSRRELLAALLEAEAE---LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 909 LTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLK---------------AEQSQQEAAEKH-----EEEKKE 968
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREiealgpvnllaieeyEELEERYDFLSEqredlEEARET 813
|
650
....*....|....
gi 1622847178 969 LERKLSDLEKKMET 982
Cdd:COG1196 814 LEEAIEEIDRETRE 827
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1043-1269 |
8.74e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 8.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1043 QADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLwsvnetlnL 1122
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL--------E 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1123 EKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLlkEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTE 1202
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLGRQPPL--ALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1203 KDQEERDHLADQIKKLITENFILA---KDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLS 1269
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEalkAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
472-1116 |
8.83e-06 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 50.91 E-value: 8.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 472 SEKSRIMELEKDLALRVQEVAELRRRLE---SNKPAGDVDMSLSLLQEISSLQEKLEVTRTdhqreiTSLKEHFgaREET 548
Cdd:pfam07111 27 TQRPTVTMWEQDVSGDGQGPGRRGRSLElegSQALSQQAELISRQLQELRRLEEEVRLLRE------TSLQQKM--RLEA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 549 HQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQI 628
Cdd:pfam07111 99 QAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 629 EKMRLDYQHEIENL---QNQQDSERSAHAKEMEALRAKLMKVIK--------------------EKENSLEAIKS-KLDK 684
Cdd:pfam07111 179 NSLETKRAGEAKQLaeaQKEAELLRKQLSKTQEELEAQVTLVESlrkyvgeqvppevhsqtwelERQELLDTMQHlQEDR 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 685 AEDQHLVEMEET-------LNKLQEAEI--KVKELEVLQAKCNEQTKvidnftSQLKATEEKLLDLDALQKASS-EGKSE 754
Cdd:pfam07111 259 ADLQATVELLQVrvqslthMLALQEEELtrKIQPSDSLEPEFPKKCR------SLLNRWREKVFALMVQLKAQDlEHRDS 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 755 MEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVS 834
Cdd:pfam07111 333 VKQLRGQVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARRRQQQQTASAEEQLKFVVNAMSS 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 835 VQRSMQETVNKLHQKEEQF----NMLSSDLEKLRENLAEMEAKFREKDEREEQ--LIKAKEKLENDIAEIMKMSGDNSSQ 908
Cdd:pfam07111 413 TQIWLETTMTRVEQAVARIpslsNRLSYAVRKVHTIKGLMARKVALAQLRQEScpPPPPAPPVDADLSLELEQLREERNR 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 909 LtkmNDELRLKERYVeelQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQ 988
Cdd:pfam07111 493 L---DAELQLSAHLI---QQEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQ 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 989 ELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKsltylltSAKKEIELMSEEL 1068
Cdd:pfam07111 567 ELTQQQEIYGQALQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEK-------ERNQELRRLQDEA 639
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 1622847178 1069 RglKSEKQLLSQEGNDLKLENGSLLSKlveLEAKIALLQGDQQKLWSV 1116
Cdd:pfam07111 640 R--KEEGQRLARRVQELERDKNLMLAT---LQQEGLLSRYKQQRLLAV 682
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
410-947 |
9.30e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 51.06 E-value: 9.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 410 MDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLE-QKSQISEDPENVATVSE-----KSRIMELEKD 483
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMdDYNNLKSALNELSSLEDmknryESEIKTAESD 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 484 LALRVQEVAELR------RRLESNKPAGDVDMSLSLLQEISSLQEKLEVtrtdhqreITSLKEHFGAREETHQK--EIKA 555
Cdd:PRK01156 265 LSMELEKNNYYKeleerhMKIINDPVYKNRNYINDYFKYKNDIENKKQI--------LSNIDAEINKYHAIIKKlsVLQK 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 556 LYTATEKLSKENESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRL 633
Cdd:PRK01156 337 DYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINV 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 634 DYQHEIENLQNQQDSERSAHAKEMEALRAKLMKvikEKENSLEAIKSKLDKAEDQHLVE-MEETLNKLQEaeiKVKELEV 712
Cdd:PRK01156 417 KLQDISSKVSSLNQRIRALRENLDELSRNMEML---NGQSVCPVCGTTLGEEKSNHIINhYNEKKSRLEE---KIREIEI 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 713 LQAKCNEQTKVIDNFTSQLKATE--------EKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEkNAESSKAS 784
Cdd:PRK01156 491 EVKDIDEKIVDLKKRKEYLESEEinksineyNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLE-DLDSKRTS 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 785 SITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLR 864
Cdd:PRK01156 570 WLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLR 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 865 ENLAEMEAKFREKDEREEQLIKAKEKLeNDIAEIMKMSgdnSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSI 944
Cdd:PRK01156 650 GKIDNYKKQIAEIDSIIPDLKEITSRI-NDIEDNLKKS---RKALDDAKANRARLESTIEILRTRINELSDRINDINETL 725
|
...
gi 1622847178 945 EDM 947
Cdd:PRK01156 726 ESM 728
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1749-2047 |
1.12e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.71 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1749 AESYFILQKEISQLAKTnsHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQImEQMTKEKTETLA 1828
Cdd:COG1196 212 AERYRELKEELKELEAE--LLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLEL-EELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1829 SLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIEtlkQAAAQKSQQLSALQEENVKLAEELG 1908
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE---ELEEELEEAEEELEEAEAELAEAEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1909 RSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLR 1988
Cdd:COG1196 366 ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE 445
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1989 GENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQ 2047
Cdd:COG1196 446 EAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
688-898 |
1.13e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 688 QHLVEMEETLNKLQEaeiKVKELEVLQAKCNEQTKVIDNFtSQLKATEEKLlDLDALQKASSEGKSEMEKLRQQLEAAEK 767
Cdd:COG4913 235 DDLERAHEALEDARE---QIELLEPIRELAERYAAARERL-AELEYLRAAL-RLWFAQRRLELLEAELEELRAELARLEA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 768 QIKHLEIEKNAESSKASSITRELQGREL-KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKL 846
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNGGdRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA 389
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 847 HQKEEQfnmLSSDLEKLRENLAEMEAKFREKDEREEQLikakeklENDIAEI 898
Cdd:COG4913 390 AALLEA---LEEELEALEEALAEAEAALRDLRRELREL-------EAEIASL 431
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
638-1098 |
1.14e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 638 EIENLQNQQDSERSAHAKEMEALRAKL------MKVIKEKENSLEAIKSKLDKAEDQ--HLVEMEETLNKLQEAEIKVKE 709
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELkeaeekEEEYAELQEELEELEEELEELEAEleELREELEKLEKLLQLLPLYQE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 710 LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQL-EAAEKQIKHLEIEKNAESSKASSITR 788
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 789 ELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE------------QFNML 856
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlgllalLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 857 SSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANEN 936
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 937 ASFLQ---KSIEDMTLKAEQSQQEAaekheeekkelerklsDLEKKMETSHNQCQELKAGY-EKATSETKTKHEEILQNL 1012
Cdd:COG4717 374 ALLAEagvEDEEELRAALEQAEEYQ----------------ELKEELEELEEQLEELLGELeELLEALDEEELEEELEEL 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1013 RKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKsLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSL 1092
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQLEEDGELAE-LLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLPP 516
|
....*.
gi 1622847178 1093 LSKLVE 1098
Cdd:COG4717 517 VLERAS 522
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
975-1671 |
1.17e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.74 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 975 DLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAR-------------EENSGLLQELEELR 1041
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQqshayltqkreaqEEQLKKQQLLKQLR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1042 KQADKAKSLTYLLTSAKKEIELMSEELRgLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLN 1121
Cdd:TIGR00618 267 ARIEELRAQEAVLEETQERINRARKAAP-LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRR 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1122 LEKEKFLEEKQDAEKHYEQ----EHLNKEVLAVEREKLLKEINVAQEELLKI-NMENDSLQASKVSMQTLIEELQLSKDA 1196
Cdd:TIGR00618 346 LLQTLHSQEIHIRDAHEVAtsirEISCQQHTLTQHIHTLQQQKTTLTQKLQSlCKELDILQREQATIDTRTSAFRDLQGQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1197 LiAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELvKDQKALVQDIEDLTAEKKSALEKlsnldntcI 1276
Cdd:TIGR00618 426 L-AHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKER-EQQLQTKEQIHLQETRKKAVVLA--------R 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1277 ALKVERDNALQNNRDLQLETDMLLHDQEKLNAS-LQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSL 1355
Cdd:TIGR00618 496 LLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRrMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSIL 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1356 TKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIiteklhkcseeaahtEMSLNEKITYLTSEKEM 1435
Cdd:TIGR00618 576 TQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQP---------------EQDLQDVRLHLQQCSQE 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1436 ASQKMTKLKKHQDSLLKEK-----SALETQNGVLLAERENSIKAIGDLKRQCdqeSANRRIIVQENMKLLGNIDALKKEL 1510
Cdd:TIGR00618 641 LALKLTALHALQLTLTQERvrehaLSIRVLPKELLASRQLALQKMQSEKEQL---TYWKEMLAQCQTLLRELETHIEEYD 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1511 QERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEM 1590
Cdd:TIGR00618 718 REFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREED 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1591 QQSL-ILEQEARAKEKESSLYENNQLHgrmvLLEQEVEElrvcTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAA 1669
Cdd:TIGR00618 798 THLLkTLEAEIGQEIPSDEDILNLQCE----TLVQEEEQ----FLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
..
gi 1622847178 1670 QL 1671
Cdd:TIGR00618 870 KI 871
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
667-1218 |
1.36e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 667 VIKEKENSLEAIKSKLDKAEDQHLVEmeetlnKLQEAEIKVKELEVLQAKCNEQ----TKVIDNFTSQLKATEEKLLDLD 742
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQreqaRETRDEADEVLEEHEERREELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 743 ALQKA---SSEGKSEMEK-----------LRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVS 808
Cdd:PRK02224 255 TLEAEiedLRETIAETERereelaeevrdLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 809 QVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAK 888
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 889 EKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQsqqeaaekHEEEKKE 968
Cdd:PRK02224 415 EELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEE--------LEAELED 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 969 LERKLSDLEKKMETShNQCQELKAGYEKaTSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAK 1048
Cdd:PRK02224 487 LEEEVEEVEERLERA-EDLVEAEDRIER-LEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1049 SltylltsakkEIELMSEELRGLKSEKQLLSQEGNDLklenGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKfL 1128
Cdd:PRK02224 565 E----------EAEEAREEVAELNSKLAELKERIESL----ERIRTLLAAIADAEDEIERLREKREALAELNDERRER-L 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1129 EEKQDAEKHYEQEH--LNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELqlskdaliaktEKDQE 1206
Cdd:PRK02224 630 AEKRERKRELEAEFdeARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL-----------EELRE 698
|
570
....*....|..
gi 1622847178 1207 ERDHLADQIKKL 1218
Cdd:PRK02224 699 RREALENRVEAL 710
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
656-941 |
1.39e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.51 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 656 EMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEEtlNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 735
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKE--EKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 736 EKLLDLDALQKasSEGKSEMEKLRQQLEAAE-KQIKHLEIEKNAESSKASSITRELQG-RELKLT------NLQENLSEV 807
Cdd:pfam17380 345 ERERELERIRQ--EERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAaRKVKILeeerqrKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 808 SQVK----DTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR-----EKD 878
Cdd:pfam17380 423 EQIRaeqeEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkilekELE 502
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 879 EREEQLIKAKEK---LENDIAEimKMSGDNSSQLTKMNDELRLKERYVEE---LQLKLTKANENASFLQ 941
Cdd:pfam17380 503 ERKQAMIEEERKrklLEKEMEE--RQKAIYEEERRREAEEERRKQQEMEErrrIQEQMRKATEERSRLE 569
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1503-1707 |
1.68e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1503 IDALKKELQERKNEnqelvaskcdlslmLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQK 1582
Cdd:COG4942 22 AAEAEAELEQLQQE--------------IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1583 LSEEIQEMQQSLIlEQEARAKEKESSLYENNQLHGRMVLLEQE----------------------VEELRVCTEELQSEK 1640
Cdd:COG4942 88 LEKEIAELRAELE-AQKEELAELLRALYRLGRQPPLALLLSPEdfldavrrlqylkylaparreqAEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 1641 FVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQ 1707
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1176-1938 |
1.92e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.12 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1176 LQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDI----------IQKLQSSYEELVK 1245
Cdd:pfam15921 108 LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMledsntqieqLRKMMLSHEGVLQ 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1246 DQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERdnalqNNRDLQLETDMLLHDQEKLNASLQAalqvkqlLRSEAS 1325
Cdd:pfam15921 188 EIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAISK-----ILRELDTEISYLKGRIFPVEDQLEA-------LKSESQ 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1326 G-----LRAQLDDASKALRKAELEtmqlqatntsLTKLLEEIKARRAVTDSECIQLlhekETLAASERRLLAEKEELLSE 1400
Cdd:pfam15921 256 NkiellLQQHQDRIEQLISEHEVE----------ITGLTEKASSARSQANSIQSQL----EIIQEQARNQNSMYMRQLSD 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1401 NRIITEKLHKCSEEAAHTemsLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKR 1480
Cdd:pfam15921 322 LESTVSQLRSELREAKRM---YEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKE 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1481 QcdqesaNRRIIVQENMKLLgNIDALKKELQERKNENQELVASkcdLSLMLKEAQNakkNLEKEHTHILQAKENLD--AE 1558
Cdd:pfam15921 399 Q------NKRLWDRDTGNSI-TIDHLRRELDDRNMEVQRLEAL---LKAMKSECQG---QMERQMAAIQGKNESLEkvSS 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1559 LNTCCSEKNILLRDSLNlQEECQKLSEEIQEMQQSLI---LEQEARAKEKESSlyENNQLHGRMVLLEQEVEELRVCTEE 1635
Cdd:pfam15921 466 LTAQLESTKEMLRKVVE-ELTAKKMTLESSERTVSDLtasLQEKERAIEATNA--EITKLRSRVDLKLQELQHLKNEGDH 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1636 LQSEKF------VLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDF-AALSKSKAELQELhscltKILDDlql 1708
Cdd:pfam15921 543 LRNVQTecealkLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLeKEINDRRLELQEF-----KILKD--- 614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1709 nhevtlAEKAQVmqdnQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAktnshisanllesqNENRTLRKDKN 1788
Cdd:pfam15921 615 ------KKDAKI----RELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLL--------------NEVKTSRNELN 670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1789 KLTlkiRELETLQSFTAAQTAEdamqiMEQMT-KEKTETLASLEDTKQTnaklQNELDTLKENNLKNVEELNKSKELLTV 1867
Cdd:pfam15921 671 SLS---EDYEVLKRNFRNKSEE-----METTTnKLKMQLKSAQSELEQT----RNTLKSMEGSDGHAMKVAMGMQKQITA 738
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847178 1868 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSrdeVTSHQKLEEERSVLNNQLLEMKKSL 1938
Cdd:pfam15921 739 KRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTV---ATEKNKMAGELEVLRSQERRLKEKV 806
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
997-1267 |
2.07e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 997 ATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQadkaksltylltsakkeIELMSEELRGLKSEKQ 1076
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERR-----------------IAALARRIRALEQELA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1077 LLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNetlnleKEKFLEEKQDAEKHYEQEHLNKEVLAvEREKLL 1156
Cdd:COG4942 80 ALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQP------PLALLLSPEDFLDAVRRLQYLKYLAP-ARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1157 KEINVAQEELLKINMEndsLQASKVSMQTLIEELQLSKDALiaktEKDQEERDHLADQIKKlitenfilakdkddIIQKL 1236
Cdd:COG4942 153 EELRADLAELAALRAE---LEAERAELEALLAELEEERAAL----EALKAERQKLLARLEK--------------ELAEL 211
|
250 260 270
....*....|....*....|....*....|.
gi 1622847178 1237 QSSYEELVKDQKALVQDIEDLTAEKKSALEK 1267
Cdd:COG4942 212 AAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
636-1319 |
2.36e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 2.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 636 QHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAiKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQA 715
Cdd:TIGR00618 151 QGEFAQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSL-HGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELK 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 716 KCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAE------------SSKA 783
Cdd:TIGR00618 230 HLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAplaahikavtqiEQQA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 784 SSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASE------------EAVSVQRSMQETVNKLHQK-- 849
Cdd:TIGR00618 310 QRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHirdahevatsirEISCQQHTLTQHIHTLQQQkt 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 850 --EEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAK--EKLENDIAEIMKMSGDNSSQLTKMNDEL--RLKERYV 923
Cdd:TIGR00618 390 tlTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKkqQELQQRYAELCAAAITCTAQCEKLEKIHlqESAQSLK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 924 EELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLekkMETSHNQCQELKAGYEKATSETKT 1003
Cdd:TIGR00618 470 EREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDN---PGPLTRRMQRGEQTYAQLETSEED 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1004 KhEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLtsaKKEIELMSEELRGLKSEKQLLSQEGN 1083
Cdd:TIGR00618 547 V-YHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRL---QDLTEKLSEAEDMLACEQHALLRKLQ 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1084 ------DLKLENGSLLSKLVELEAKIA-----LLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKH-YEQEHLNKEVLAVE 1151
Cdd:TIGR00618 623 peqdlqDVRLHLQQCSQELALKLTALHalqltLTQERVREHALSIRVLPKELLASRQLALQKMQSeKEQLTYWKEMLAQC 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1152 REKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDD 1231
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSH 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1232 IIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETD-MLLHDQEKLNASL 1310
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEIThQLLKYEECSKQLA 862
|
....*....
gi 1622847178 1311 QAALQVKQL 1319
Cdd:TIGR00618 863 QLTQEQAKI 871
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
675-873 |
3.40e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 3.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 675 LEAIKSKLDKAEDQ--HLVEMEETLNKLQEAEIKVKELEVL---------QAKCNEQTKVIDNFTSQLKATEEKLLDLDA 743
Cdd:COG4913 237 LERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLraalrlwfaQRRLELLEAELEELRAELARLEAELERLEA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 744 LQKASSEGKSEMEKLR-----QQLEAAEKQIKHLEieknaesskassitRELQGRELKLTNLQENLSEVSQVKDTLEKEL 818
Cdd:COG4913 317 RLDALREELDELEAQIrgnggDRLEQLEREIERLE--------------RELEERERRRARLEALLAALGLPLPASAEEF 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 819 QILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLAEMEAK 873
Cdd:COG4913 383 AALRAEAAALLEALEEELEALEEALAEAEAALRD---LRRELRELEAEIASLERR 434
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1318-1874 |
4.53e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.58 E-value: 4.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1318 QLLRSEASGLRAQLDDASKA---LRKAELETMQLQATNTSLtKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEK 1394
Cdd:pfam05557 17 EKKQMELEHKRARIELEKKAsalKRQLDRESDRNQELQKRI-RLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1395 EELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGvLLAERENSIKa 1474
Cdd:pfam05557 96 ESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQS-SLAEAEQRIK- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1475 igDLKRQCdQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQA--- 1551
Cdd:pfam05557 174 --ELEFEI-QSQEQDSEIVKNSKSELARIPELEKELERLREHNKHLNENIENKLLLKEEVEDLKRKLEREEKYREEAatl 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1552 ---KENLDAELNtccSEKNILLRDSLNLQEEcQKLSEEIQEMQQslilEQEARAKEKESSLYENNQLHGRMVLLEQEVEE 1628
Cdd:pfam05557 251 eleKEKLEQELQ---SWVKLAQDTGLNLRSP-EDLSRRIEQLQQ----REIVLKEENSSLTSSARQLEKARRELEQELAQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1629 LRVCTEELQSekfvllqeKTKSEQEVAEIIEEKE-LLTAEAAQLAAHIKTLKSDFaALSKSKAELQELHSCLTKILDDLQ 1707
Cdd:pfam05557 323 YLKKIEDLNK--------KLKRHKALVRRLQRRVlLLTKERDGYRAILESYDKEL-TMSNYSPQLLERIEEAEDMTQKMQ 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1708 LNHEVTLA--EKAQVMQDNQNLLAEKSEM---MLEKDELLKEKEMLAESYFILQKEISQLAKTNSHI--SANLLESQNEN 1780
Cdd:pfam05557 394 AHNEEMEAqlSVAEEELGGYKQQAQTLERelqALRQQESLADPSYSKEEVDSLRRKLETLELERQRLreQKNELEMELER 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1781 RTLRKDKNKLTLKIREletLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNK 1860
Cdd:pfam05557 474 RCLQGDYDPKKTKVLH---LSMNPAAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDLRK 550
|
570
....*....|....
gi 1622847178 1861 SKELLTVENQKMEE 1874
Cdd:pfam05557 551 ELESAELKNQRLKE 564
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
560-1086 |
4.53e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 4.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 560 TEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEI 639
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT----QTQL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 640 ENLQNQQDSE-RSAHAKEMEALRAKlmKVIKEKENSLEAIKSKLDKAEDQHlvemEETLNKLQEAEIKVKE--LEVLQAK 716
Cdd:TIGR04523 256 NQLKDEQNKIkKQLSEKQKELEQNN--KKIKELEKQLNQLKSEISDLNNQK----EQDWNKELKSELKNQEkkLEEIQNQ 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 717 CNEQTKVIDNFTSQLKATEEKLLDLDalqkassegkSEMEKLRQQLEAAEKQIKHLEIEKNAES-------SKASSITRE 789
Cdd:TIGR04523 330 ISQNNKIISQLNEQISQLKKELTNSE----------SENSEKQRELEEKQNEIEKLKKENQSYKqeiknleSQINDLESK 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 790 LQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEavsvqrsmqetvnklhqkeeqfnmlssdLEKLRENLAE 869
Cdd:TIGR04523 400 IQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSE----------------------------IKDLTNQDSV 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 870 MEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDM-T 948
Cdd:TIGR04523 452 KELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLeS 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 949 LKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKhEEILQNLRKTLLDTEDKLKGARE 1028
Cdd:TIGR04523 532 EKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEK-QELIDQKEKEKKDLIKEIEEKEK 610
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 1029 ENSGLLQELEELRKQADKAKSLTYLLTSAK----KEIELMSEELRGLKSEKQLLSQEGNDLK 1086
Cdd:TIGR04523 611 KISSLEKELEKAKKENEKLSSIIKNIKSKKnklkQEVKQIKETIKEIRNKWPEIIKKIKESK 672
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1715-1909 |
6.02e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 6.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1715 AEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKI 1794
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1795 RE-------------LETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1861
Cdd:COG4942 107 AEllralyrlgrqppLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622847178 1862 KELLtveNQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGR 1909
Cdd:COG4942 187 RAAL---EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
741-897 |
6.22e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.84 E-value: 6.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 741 LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKD--TLEKEL 818
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyeALQKEI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 819 QILKEKFAEASEEavsvqrsMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREK----DEREEQLIKAKEKLEND 894
Cdd:COG1579 99 ESLKRRISDLEDE-------ILELMERIEELEEELAELEAELAELEAELEEKKAELDEElaelEAELEELEAEREELAAK 171
|
...
gi 1622847178 895 IAE 897
Cdd:COG1579 172 IPP 174
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1836-2060 |
7.07e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.37 E-value: 7.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1836 TNAKLQNELDTLKENNLKNVEE------LNKSKELLtvenQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELG- 1908
Cdd:PRK11281 37 TEADVQAQLDALNKQKLLEAEDklvqqdLEQTLALL----DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDe 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1909 --RSRDEVTSHQKLEEERSVLNNQLLEMKKSLpsntlreskfiKDADEEKASLQKSISITSALLTEKDAELEKLRNEvtv 1986
Cdd:PRK11281 113 etRETLSTLSLRQLESRLAQTLDQLQNAQNDL-----------AEYNSQLVSLQTQPERAQAALYANSQRLQQIRNL--- 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 1987 LRGENASAKSLHSvvqtleSDKVKLELKVKNLELQLKENKRQLSSSSGNTDT---QADE-DERAQESQQMIDFLNSVI 2060
Cdd:PRK11281 179 LKGGKVGGKALRP------SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLlqkQRDYlTARIQRLEHQLQLLQEAI 250
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
405-1260 |
9.32e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.86 E-value: 9.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKgdleQKSQISEdpenvatVSEKSRIMELEKD- 483
Cdd:pfam01576 72 ELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAAR----QKLQLEK-------VTTEAKIKKLEEDi 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 484 LALRVQEVAELRRRLESNKPAGDVDMSLSLLQEISSLQEKLevtRTDHQREITSLkehfgarEETHQKEikalytatEKL 563
Cdd:pfam01576 141 LLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKL---KNKHEAMISDL-------EERLKKE--------EKG 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 564 SKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKgLGTETAEfaelKTQIEKMRLDYQHEIENLQ 643
Cdd:pfam01576 203 RQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALAR-LEEETAQ----KNNALKKIRELEAQISELQ 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 644 NQQDSERSAhakemealRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEME---------ETLNKLQEAEIKVKELEVLQ 714
Cdd:pfam01576 278 EDLESERAA--------RNKAEKQRRDLGEELEALKTELEDTLDTTAAQQElrskreqevTELKKALEEETRSHEAQLQE 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 715 AKcNEQTKVIDNFTSQLKATEEKLLDLD----ALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITREL 790
Cdd:pfam01576 350 MR-QKHTQALEELTEQLEQAKRNKANLEkakqALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQR 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 791 QGRELKLTNLQENLSEVSQVKDTLEKelqilkeKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEM 870
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEG-------KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 871 EAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQL-------TKMNDELRLKERYVEELQLKLTKANENASFLQKS 943
Cdd:pfam01576 502 QEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLealeegkKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQE 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 944 IEDMTLKAEQSQQeaaekheeekkelerKLSDLEKKMETSHNQCQELKA-------GYEKATSETKTKHEEILqNLRKTL 1016
Cdd:pfam01576 582 LDDLLVDLDHQRQ---------------LVSNLEKKQKKFDQMLAEEKAisaryaeERDRAEAEAREKETRAL-SLARAL 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1017 LDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLE---NGSLL 1093
Cdd:pfam01576 646 EEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRlevNMQAL 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1094 SKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVE---------REKLLKEINVAQE 1164
Cdd:pfam01576 726 KAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEaqidaankgREEAVKQLKKLQA 805
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1165 ELLKINMENDSLQASKVSMQTLIEE------------LQLSKDALIAKTEKDQ--EERDHLADQIKKLITENFILAKDKD 1230
Cdd:pfam01576 806 QMKDLQRELEEARASRDEILAQSKEsekklknleaelLQLQEDLAASERARRQaqQERDELADEIASGASGKSALQDEKR 885
|
890 900 910 920
....*....|....*....|....*....|....*....|
gi 1622847178 1231 DIIQKLQSSYEELVKDQ----------KALVQDIEDLTAE 1260
Cdd:pfam01576 886 RLEARIAQLEEELEEEQsntellndrlRKSTLQVEQLTTE 925
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1078-1300 |
1.17e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 47.23 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1078 LSQEGNDLKLENgsLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEkqdAEKHYEQEHlnkevlaverEKLLK 1157
Cdd:PRK05771 36 LKEELSNERLRK--LRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEE---LIKDVEEEL----------EKIEK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1158 EINVAQEELLKINMENDSLQASKVSMQTL------IEELQLSK--DALIAKTEKDQEERDHLADQIKKLITEN------- 1222
Cdd:PRK05771 101 EIKELEEEISELENEIKELEQEIERLEPWgnfdldLSLLLGFKyvSVFVGTVPEDKLEELKLESDVENVEYIStdkgyvy 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1223 ---FILAKDKDDI--------IQKLQSSYEELVKDQ-KALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNR 1290
Cdd:PRK05771 181 vvvVVLKELSDEVeeelkklgFERLELEEEGTPSELiREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIEL 260
|
250
....*....|
gi 1622847178 1291 DLQLETDMLL 1300
Cdd:PRK05771 261 ERAEALSKFL 270
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1512-2019 |
1.28e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 47.34 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1512 ERKNENQE-LVASKCDLSLMLKEAQNAKKNLEKehthILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEM 1590
Cdd:PRK02224 223 ERYEEQREqARETRDEADEVLEEHEERREELET----LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1591 QQSLILEqearAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQ 1670
Cdd:PRK02224 299 LAEAGLD----DADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEE 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1671 LAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEmmlEKDELLKEKEMLAE 1750
Cdd:PRK02224 375 AREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRT---ARERVEEAEALLEA 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1751 SYFilqKEISQLAKTNSHISA------NLLESQNENRTLRKDKNKLTLKIRELETLQSFTA--------AQTAEDAMQIM 1816
Cdd:PRK02224 452 GKC---PECGQPVEGSPHVETieedreRVEELEAELEDLEEEVEEVEERLERAEDLVEAEDrierleerREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1817 EQMTKEKTETLASLEDTKQtnaKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQ------AAAQKS 1890
Cdd:PRK02224 529 RETIEEKRERAEELRERAA---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERirtllaAIADAE 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1891 QQLSALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKSLPSNTLRE-SKFIKDADEEKASLQKSI-S 1964
Cdd:PRK02224 606 DEIERLREKREALAELNDERRERLAEkrerKRELEAEFDEARIEEAREDKERAEEYLEQvEEKLDELREERDDLQAEIgA 685
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 1965 ITSALltekdAELEKLRNEVTVLRGENASAKSLHSVVQTLES--DKVKLELKVKNLE 2019
Cdd:PRK02224 686 VENEL-----EELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1624-2075 |
1.30e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1624 QEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKtlKSDFAALSKSKAELQELHSCLTKI- 1702
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAK--KAAEAAKAEAEAAADEAEAAEEKAe 1367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1703 LDDLQLNHEVTLAEKAQVMQDNQ---NLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNShisanLLESQNE 1779
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKkkaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE-----AKKKAEE 1442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1780 NRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELN 1859
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAK 1522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1860 KSKELLTVEN-QKMEEFRKEIETLKQAAAQKSQQLSalQEENVKLAEELGRS-RDEVTSHQKLEEERSVLNNQLLEMKKS 1937
Cdd:PTZ00121 1523 KADEAKKAEEaKKADEAKKAEEKKKADELKKAEELK--KAEEKKKAEEAKKAeEDKNMALRKAEEAKKAEEARIEEVMKL 1600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1938 LPSNTLRESKFIKDADEEKA---SLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKL--- 2011
Cdd:PTZ00121 1601 YEEEKKMKAEEAKKAEEAKIkaeELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAeea 1680
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 2012 ---ELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVE 2075
Cdd:PTZ00121 1681 kkaEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE 1747
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
612-1062 |
1.39e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 612 KGLGTETAEFAELKTQIEKMRldyqHEIENLQNQQDSERSAHAKEMEALRA-KLMKVIKEKENSLEAIKSKLDKAEDQHL 690
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELE----EELEELEAELEELREELEKLEKLLQLlPLYQELEALEAELAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 691 vEMEETLNKLQEAEikvKELEVLQAKCNEQTKVIDNftSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIK 770
Cdd:COG4717 157 -ELRELEEELEELE---AELAELQEELEELLEQLSL--ATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 771 HLEIEKNAES-----SKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNK 845
Cdd:COG4717 231 QLENELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 846 LHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKmsgdnsSQLTKMNDEL--RLKERYV 923
Cdd:COG4717 311 PALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQL------EELEQEIAALlaEAGVEDE 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 924 EELQLKLTKANENASFLQKsiedmtlKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKT 1003
Cdd:COG4717 385 EELRAALEQAEEYQELKEE-------LEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAE 457
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1004 KHEEILQnlrktlLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIE 1062
Cdd:COG4717 458 LEAELEQ------LEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1502-2027 |
1.53e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1502 NIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQ 1581
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1582 KLSEEiqEMQQSLILEQEARAKEKESS-LYENNQLHGRMVLLEQEVEELRVCTEELQSE--KFVLLQEKTKSEQEVAEII 1658
Cdd:PRK01156 264 DLSME--LEKNNYYKELEERHMKIINDpVYKNRNYINDYFKYKNDIENKKQILSNIDAEinKYHAIIKKLSVLQKDYNDY 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1659 EEKELLTAEAAQLAAHIKTLKSDFAALSKS-----------KAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNL 1727
Cdd:PRK01156 342 IKKKSRYDDLNNQILELEGYEMDYNSYLKSieslkkkieeySKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDI 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1728 LAEKSEMMLEKDELLKEKEMLAESYFILQKEiSQLAKTNSHI----SANLLESQNEnrtlrkDKNKLTLKIRELETLQSf 1803
Cdd:PRK01156 422 SSKVSSLNQRIRALRENLDELSRNMEMLNGQ-SVCPVCGTTLgeekSNHIINHYNE------KKSRLEEKIREIEIEVK- 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1804 TAAQTAEDAMQIMEQMTKEKTETLAS----LEDTKQTNAKLQNELDTLKENNLKNVEELNKSKEL-LTVENQKMEEFRK- 1877
Cdd:PRK01156 494 DIDEKIVDLKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLkLEDLDSKRTSWLNa 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1878 -------EIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQ--LLEMKKSLPSNTLRESK 1947
Cdd:PRK01156 574 lavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiREIENEANNLNNKynEIQENKILIEKLRGKID 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1948 FIKDADEEKASLQKSISITSALLTEKDAELEKLRNEvtvLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKR 2027
Cdd:PRK01156 654 NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
352-580 |
1.59e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA----RRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 432 EEEKRKVEDL---QFRVEEESITKGDLEQKS--QISEDPENVATVSEksRIMELEKDLALRVQEVAELRRRLESNKPAGD 506
Cdd:COG4942 100 EAQKEELAELlraLYRLGRQPPLALLLSPEDflDAVRRLQYLKYLAP--ARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 507 vdmslSLLQEISSLQEKLEVTRTDHQREITSLKehfgAREETHQKEIKALYTATEKLSKENESLKSKLEHANKE 580
Cdd:COG4942 178 -----ALLAELEEERAALEALKAERQKLLARLE----KELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
747-1091 |
1.60e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 47.14 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 747 ASSEGKsemeklrQQLEAAEKQIKHLEIEKNAESSKASSitrELQGRELKlTNLQENLSEVSQVKDTLEKELQILKEKFA 826
Cdd:NF012221 1536 ATSESS-------QQADAVSKHAKQDDAAQNALADKERA---EADRQRLE-QEKQQQLAAISGSQSQLESTDQNALETNG 1604
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 827 EASEEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKL----RENLAEmeakfREKDEREEQLIKAKEKLENDIAEIMKM 901
Cdd:NF012221 1605 QAQRDAILEeSRAVTKELTTLAQGLDALDSQATYAGESgdqwRNPFAG-----GLLDRVQEQLDDAKKISGKQLADAKQR 1679
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 902 SGDNSSQLTKMndelrlkeryVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKElerklsdlEKKME 981
Cdd:NF012221 1680 HVDNQQKVKDA----------VAKSEAGVAQGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQA--------ESDAN 1741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 982 TSHNQCQelKAGyEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRkqaDKAKSLTYLLTSAKKEI 1061
Cdd:NF012221 1742 AAANDAQ--SRG-EQDASAAENKANQAQADAKGAKQDESDKPNRQGAAGSGLSGKAYSVE---GVAEPGSHINPDSPAAA 1815
|
330 340 350
....*....|....*....|....*....|....*.
gi 1622847178 1062 ------ELMSEELRGLKSEKQLLsqegNDLKLENGS 1091
Cdd:NF012221 1816 dgrfseGLTEQEQEALEGATNAV----NRLQINAGS 1847
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
471-921 |
1.81e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.87 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 471 VSEKSRIMELEKDLAlrvqEVAELRRRLESnkpagDVDMS---LSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREE 547
Cdd:COG3096 302 AEEQYRLVEMARELE----ELSARESDLEQ-----DYQAAsdhLNLVQTALRQQEKIERYQEDLEELTERLEEQEEVVEE 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 548 TH--QKEIKALYTATEKlskENESLKSKLehankensdviALWKSKLET----AIASHQ--QAMEELKVSFskGLGTETA 619
Cdd:COG3096 373 AAeqLAEAEARLEAAEE---EVDSLKSQL-----------ADYQQALDVqqtrAIQYQQavQALEKARALC--GLPDLTP 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 620 EFAELKTQIEKMRLDYQHEiENLQNQQ-----DSERSAHAKEMEALRAKLMKVikEKENSLEAIKSKLDKAEDQ------ 688
Cdd:COG3096 437 ENAEDYLAAFRAKEQQATE-EVLELEQklsvaDAARRQFEKAYELVCKIAGEV--ERSQAWQTARELLRRYRSQqalaqr 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 689 ------HLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLkatEEKLLDLDALQKASSEGKSEMeklRQQL 762
Cdd:COG3096 514 lqqlraQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAEL---EAQLEELEEQAAEAVEQRSEL---RQQL 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 763 EAAEKQIKHLEieknaessKASSITRELQGRelkltnlqenlsevsqvkdtlekeLQILKEKFAEASEEAVSVQRSMQET 842
Cdd:COG3096 588 EQLRARIKELA--------ARAPAWLAAQDA------------------------LERLREQSGEALADSQEVTAAMQQL 635
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 843 vnklhqkeeqfnmlssdLEKLREnlAEMEakfrekderEEQLIKAKEKLENDIAEIMKMSGDNSSQLtkmndeLRLKER 921
Cdd:COG3096 636 -----------------LERERE--ATVE---------RDELAARKQALESQIERLSQPGGAEDPRL------LALAER 680
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1233-1973 |
1.81e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.64 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1233 IQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLsNLDNTCIALKVERDnaLQNNRDLQLETDMLLHDQEKLNASLQA 1312
Cdd:pfam05483 90 IKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQEL-QFENEKVSLKLEEE--IQENKDLIKENNATRHLCNLLKETCAR 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1313 ALQVKQLLRSEASGLRAQLDDASKALRK--AELETMQLQATNTSLTK--LLEEIKARRAVTDSECIQLLHEKETLAASER 1388
Cdd:pfam05483 167 SAEKTKKYEYEREETRQVYMDLNNNIEKmiLAFEELRVQAENARLEMhfKLKEDHEKIQHLEEEYKKEINDKEKQVSLLL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1389 RLLAEKEE-------LLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQN 1461
Cdd:pfam05483 247 IQITEKENkmkdltfLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1462 GVLLAERENSIKaigdlkrQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQElvaskcDLSLMLKEAQNAKKNL 1541
Cdd:pfam05483 327 CQLTEEKEAQME-------ELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNED------QLKIITMELQKKSSEL 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1542 EkEHTHILQAKENLDAELNTCCSEKNILLRDslnlQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVL 1621
Cdd:pfam05483 394 E-EMTKFKNNKEVELEELKKILAEDEKLLDE----KKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1622 LEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHsclTK 1701
Cdd:pfam05483 469 YLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKE---MN 545
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1702 ILDDLQLNHEVTLAEKAQVMQDNQNllAEKSEMMLEKDELLKEKEMLaesyfILQKEISQLAKTNSHISANLLESQNENR 1781
Cdd:pfam05483 546 LRDELESVREEFIQKGDEVKCKLDK--SEENARSIEYEVLKKEKQMK-----ILENKCNNLKKQIENKNKNIEELHQENK 618
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1782 TLRKDKNKLTLKIRELETlqsftaaqtaedamqimeQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1861
Cdd:pfam05483 619 ALKKKGSAENKQLNAYEI------------------KVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKA 680
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1862 KelltVENQKMEEFRKEIETLKQaaaQKSQQLSALQEENVKLAEELGRSRD-EVTSHQKLEEERSVLNNQLLEMKKSLPS 1940
Cdd:pfam05483 681 K----AIADEAVKLQKEIDKRCQ---HKIAEMVALMEKHKHQYDKIIEERDsELGLYKNKEQEQSSAKAALEIELSNIKA 753
|
730 740 750
....*....|....*....|....*....|...
gi 1622847178 1941 NTLRESKFIKDADEEKASLQKSISITSALLTEK 1973
Cdd:pfam05483 754 ELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2106-2123 |
1.88e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.88e-04
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1003-1930 |
2.04e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 2.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1003 TKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQeg 1082
Cdd:TIGR00606 182 TRYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEH-- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1083 ndlklengsLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHlNKEVLAVEREKLlkeinVA 1162
Cdd:TIGR00606 260 ---------NLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNH-QRTVREKERELV-----DC 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1163 QEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEE 1242
Cdd:TIGR00606 325 QRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1243 lvKDQKALVQDIEDLTAEKKSALEKLSNLdntcialkveRDNALQNNRDLQLETDMLLHDQEKLNASL----QAALQVKQ 1318
Cdd:TIGR00606 405 --DEAKTAAQLCADLQSKERLKQEQADEI----------RDEKKGLGRTIELKKEILEKKQEELKFVIkelqQLEGSSDR 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1319 LLRSEASgLRAQLDDASKALRKAELETMQLQATNTSLTKLleEIKARRAVTDSECIQLLHEKETLAASErrlLAEKEELL 1398
Cdd:TIGR00606 473 ILELDQE-LRKAERELSKAEKNSLTETLKKEVKSLQNEKA--DLDRKLRKLDQEMEQLNHHTTTRTQME---MLTKDKMD 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1399 SENRIITEKLHKCSEEAAHTEMSLNEKIT-----YLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIK 1473
Cdd:TIGR00606 547 KDEQIRKIKSRHSDELTSLLGYFPNKKQLedwlhSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYED 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1474 AIGDLKRQCDQESanrriivqenmkllgNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKe 1553
Cdd:TIGR00606 627 KLFDVCGSQDEES---------------DLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTE- 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1554 nldAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELR--V 1631
Cdd:TIGR00606 691 ---AELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKndI 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1632 CTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEA----AQLAAHIKTLKSDFaALSKSKAELQELHSCLTKILDDLQ 1707
Cdd:TIGR00606 768 EEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVerkiAQQAAKLQGSDLDR-TVQQVNQEKQEKQHELDTVVSKIE 846
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1708 LNHEVTlAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLaktNSHISANLLESQNENRTLRKDK 1787
Cdd:TIGR00606 847 LNRKLI-QDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSL---IREIKDAKEQDSPLETFLEKDQ 922
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1788 NKLTLKIRELEtlqsfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNEldtLKENNLKNVE-ELNKSKELLT 1866
Cdd:TIGR00606 923 QEKEELISSKE-----TSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLK---QKETELNTVNaQLEECEKHQE 994
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1867 VENQKMEEFRKEIETLKQAAA---------QKSQQLSALQEENVKLAEELGRSR--DEVTSHQKLEEERSVLNNQ 1930
Cdd:TIGR00606 995 KINEDMRLMRQDIDTQKIQERwlqdnltlrKRENELKEVEEELKQHLKEMGQMQvlQMKQEHQKLEENIDLIKRN 1069
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1635-1931 |
2.09e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1635 ELQSEKFVLLQEKTKSEQEVaeiieEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTL 1714
Cdd:TIGR02168 206 ERQAEKAERYKELKAELREL-----ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1715 AEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKI 1794
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1795 RELETLQ--SFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKElltvenqkm 1872
Cdd:TIGR02168 361 EELEAELeeLESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE--------- 431
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1873 eefRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQL 1931
Cdd:TIGR02168 432 ---EAELKELQAELEELEEELEELQEELERLEEALEELREEL---EEAEQALDAAEREL 484
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1327-2036 |
2.19e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.61 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1327 LRAQLDDASKALRKAELetmqLQATNTSLTKLLEEIKARRAvtdseciqlLHEKETLAASERRllaekEELLSENRIITE 1406
Cdd:COG5022 760 LRRRYLQALKRIKKIQV----IQHGFRLRRLVDYELKWRLF---------IKLQPLLSLLGSR-----KEYRSYLACIIK 821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1407 KlhkcseeaahTEMSLNEKITYLTSEKEMASQKMT---------KLKKHQDSLLKEKSALETQNGVLLAERENSIKaigd 1477
Cdd:COG5022 822 L----------QKTIKREKKLRETEEVEFSLKAEVliqkfgrslKAKKRFSLLKKETIYLQSAQRVELAERQLQEL---- 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1478 lkrqcDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELvasKCDLSLMLKEAQNAK-----KNLEKEHTHILQAK 1552
Cdd:COG5022 888 -----KIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEF---KTELIARLKKLLNNIdleegPSIEYVKLPELNKL 959
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1553 ENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSL--ILEQEARAKEKESSLYENNQ----LHGRMVLLEQEV 1626
Cdd:COG5022 960 HEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELaeLSKQYGALQESTKQLKELPVevaeLQSASKIISSES 1039
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1627 EELRVCTeELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLaAHIKTLKSDFAALSKSKAELQELHSCL----TKI 1702
Cdd:COG5022 1040 TELSILK-PLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQL-YQLESTENLLKTINVKDLEVTNRNLVKpanvLQF 1117
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1703 LDDLQLNHEVTLAEKAQVMQDNQNLLAEK---SEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHI-SANLLESQN 1778
Cdd:COG5022 1118 IVAQMIKLNLLQEISKFLSQLVNTLEPVFqklSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALyDEKSKLSSS 1197
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1779 ENRTLRKDKNKLTLKIRELETLQSFTAAQTAEdAMQIMEQMTKEKTETlaSLEDTKQTNAKLQNEldtlkennlKNVEEL 1858
Cdd:COG5022 1198 EVNDLKNELIALFSKIFSGWPRGDKLKKLISE-GWVPTEYSTSLKGFN--NLNKKFDTPASMSNE---------KLLSLL 1265
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1859 NKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENV--KLAEELGRSRDEVtSHQKLEEERSVLNNQLLEMKK 1936
Cdd:COG5022 1266 NSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLrwKSATEVNYNSEEL-DDWCREFEISDVDEELEELIQ 1344
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1937 SLPSNTLRESKfIKDADEekaslqksisITSALLTEKDAELEKLRNEVTVLRGENASAKslhSVVQTLESDKVKLELKVK 2016
Cdd:COG5022 1345 AVKVLQLLKDD-LNKLDE----------LLDACYSLNPAEIQNLKSRYDPADKENNLPK---EILKKIEALLIKQELQLS 1410
|
730 740
....*....|....*....|
gi 1622847178 2017 NLELQLKENKRQLSSSSGNT 2036
Cdd:COG5022 1411 LEGKDETEVHLSEIFSEEKS 1430
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
356-499 |
2.33e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.39 E-value: 2.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 356 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD 421
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 422 REKVELLNQLEEEKRKVEDLQFRVEEESItkgdlEQKSQISEDPEnvaTVSEKSRIMELEKDLALRVQEVAELRRRLE 499
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARS-----EERREIRKDRE---ISRLDREIERLERELEEERERIEELKRKLE 496
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1520-1895 |
2.64e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.43 E-value: 2.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1520 LVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLILEQE 1599
Cdd:PLN02939 30 RLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1600 ARAKEKESSLYENNQLHGrmVLLEQEVEELRvcteelQSEKFVLL--QEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKT 1677
Cdd:PLN02939 110 AIDNEQQTNSKDGEQLSD--FQLEDLVGMIQ------NAEKNILLlnQARLQALEDLEKILTEKEALQGKINILEMRLSE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1678 LKSDFAALSKSKAELQELHSCLTKILDDLQLNHEvtlAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLA------ES 1751
Cdd:PLN02939 182 TDARIKLAAQEKIHVEILEEQLEKLRNELLIRGA---TEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIevaeteER 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1752 YFILQKEISQLAKTNSHISANLLESQNEnrTLRKDKNKLTLKIRELETLQSF--TAAQTAEDAMQIMEQMT--KEKTETL 1827
Cdd:PLN02939 259 VFKLEKERSLLDASLRELESKFIVAQED--VSKLSPLQYDCWWEKVENLQDLldRATNQVEKAALVLDQNQdlRDKVDKL 336
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 1828 -ASLEDTKQTnaKLQNELDTLKENNLKNVEE-LNKSKE----LLTVENQKMEEFRKEIETLKQAAAQKSQQLSA 1895
Cdd:PLN02939 337 eASLKEANVS--KFSSYKVELLQQKLKLLEErLQASDHeihsYIQLYQESIKEFQDTLSKLKEESKKRSLEHPA 408
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
355-775 |
3.29e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 355 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHvlELEAKMDQLRTMVEAADREKVELLNQLEEE 434
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 435 KRKVEDLQFRVEEESITKGDLEQ---------KSQISEDPENVATVSEksRIMELEKDLALRVQEVAELRRRLESNKPAG 505
Cdd:COG4717 159 RELEEELEELEAELAELQEELEElleqlslatEEELQDLAEELEELQQ--RLAELEEELEEAQEELEELEEELEQLENEL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 506 DVDMSLSLLQEISSLQeKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKEnsDVI 585
Cdd:COG4717 237 EAAALEERLKEARLLL-LIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL--PAL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 586 ALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEiENLQNQQDSERSAHAKEMEALRAKLM 665
Cdd:COG4717 314 EELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE-ELEQEIAALLAEAGVEDEEELRAALE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 666 KviKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLdalq 745
Cdd:COG4717 393 Q--AEEYQELKEELEELEEQLEELLGELEELLEALDEEELE-EELEELEEELEELEEELEELREELAELEAELEQL---- 465
|
410 420 430
....*....|....*....|....*....|
gi 1622847178 746 kassEGKSEMEKLRQQLEAAEKQIKHLEIE 775
Cdd:COG4717 466 ----EEDGELAELLQELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1232-1696 |
3.43e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1232 IIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQ 1311
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1312 AALQVKQLLRseasgLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKEtlaASERRLL 1391
Cdd:COG4717 127 LLPLYQELEA-----LEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE---EELQDLA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1392 AEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKityltsEKEMASQKMTKLKKHQDSLLKEKSAL-------------- 1457
Cdd:COG4717 199 EELEELQQRLAELEEELEEAQEELEELEEELEQL------ENELEAAALEERLKEARLLLLIAAALlallglggsllsli 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1458 ETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNA 1537
Cdd:COG4717 273 LTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1538 KKNLEKEHTHIL--QAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLilEQEARAKEKESSLYENNQL 1615
Cdd:COG4717 353 LREAEELEEELQleELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQL--EELLGELEELLEALDEEEL 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1616 HGRMVLLEQEVEELRVCTEELQSEKFVLLQE--KTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQ 1693
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAEleQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
...
gi 1622847178 1694 ELH 1696
Cdd:COG4717 511 EER 513
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1378-1763 |
3.60e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.10 E-value: 3.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1378 HEKETLAASERRLLAEKEELLSENRIITE--KLHKCSEEAAhtEMSLNEKItyLTSEKEMASQKMT----------KLKK 1445
Cdd:PRK04863 277 HANERRVHLEEALELRRELYTSRRQLAAEqyRLVEMARELA--ELNEAESD--LEQDYQAASDHLNlvqtalrqqeKIER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1446 HQDSLLKEKSALETQNGVL------LAERENSIKA----IGDLKRQCdqesAN--RRIIVQENM---------------K 1498
Cdd:PRK04863 353 YQADLEELEERLEEQNEVVeeadeqQEENEARAEAaeeeVDELKSQL----ADyqQALDVQQTRaiqyqqavqalerakQ 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1499 LLGN----IDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKnlekEHTHILQAKENLDAEL--NTCCSEKNILLRD 1572
Cdd:PRK04863 429 LCGLpdltADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHS----QFEQAYQLVRKIAGEVsrSEAWDVARELLRR 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1573 SLNLQ---EECQKLSEEIQEMQQSLILEQEArakekESSLYENNQLHGRMVLLEQEVEELrvcTEELqsekfvllqektk 1649
Cdd:PRK04863 505 LREQRhlaEQLQQLRMRLSELEQRLRQQQRA-----ERLLAEFCKRLGKNLDDEDELEQL---QEEL------------- 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1650 sEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKilddLQLNHEVTLAEKAQVMQDNQNLLA 1729
Cdd:PRK04863 564 -EARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALAR----LREQSGEEFEDSQDVTEYMQQLLE 638
|
410 420 430
....*....|....*....|....*....|....
gi 1622847178 1730 EKSEMMLEKDELLKEKEMlaesyfiLQKEISQLA 1763
Cdd:PRK04863 639 RERELTVERDELAARKQA-------LDEEIERLS 665
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
646-872 |
3.72e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 646 QDSERSAHAKEMEALRAKlmkvIKEKENSLEAIKSKLDKAEDQhLVEMEETLNKLQEAEIKV-KELEVLQAKCNEQTKVI 724
Cdd:COG4942 18 QADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQ-LAALERRIAALARRIRALeQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 725 DNFTSQLKATEEKLLD-LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQEN 803
Cdd:COG4942 93 AELRAELEAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 804 LSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSM---QETVNKLHQKEEQFNMLSSDLEKLRENLAEMEA 872
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELaelAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
808-1051 |
3.95e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 808 SQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKA 887
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 888 KEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEkk 967
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLA---LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 968 elerklsdleKKMETSHNQCQELKAGYEKAtsetKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1047
Cdd:COG4942 174 ----------AELEALLAELEEERAALEAL----KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
....
gi 1622847178 1048 KSLT 1051
Cdd:COG4942 240 AERT 243
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
800-1146 |
3.96e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.28 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 800 LQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDE 879
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 880 REEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAA 959
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 960 EKHEEEKKELERKLSDLEKKMEtshnqcQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEE 1039
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIE------SLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1040 LRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNET 1119
Cdd:COG4372 263 LELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADL 342
|
330 340
....*....|....*....|....*..
gi 1622847178 1120 LNLEKEKFLEEKQDAEKHYEQEHLNKE 1146
Cdd:COG4372 343 LQLLLVGLLDNDVLELLSKGAEAGVAD 369
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
640-883 |
4.27e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 640 ENLQNQQDSERSAHA---KEMEALRAKLmkviKEKENSLEAIKSK-----LDKAEDQHLVEMEETLNKLQEAEIKVKELE 711
Cdd:COG3206 164 QNLELRREEARKALEfleEQLPELRKEL----EEAEAALEEFRQKnglvdLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 712 vlqakcneqtkvidnftSQLKATEEKLlDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 791
Cdd:COG3206 240 -----------------ARLAALRAQL-GSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 792 grelkltNLQENL-SEVSQVKDTLEKELQILKEKFAEASEEavsvQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEM 870
Cdd:COG3206 302 -------ALRAQLqQEAQRILASLEAELEALQAREASLQAQ----LAQLEARLAELPELEAELRRLEREVEVARELYESL 370
|
250
....*....|...
gi 1622847178 871 EAKFREKDEREEQ 883
Cdd:COG3206 371 LQRLEEARLAEAL 383
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1828-2029 |
4.42e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1828 ASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1907
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1908 GRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVL 1987
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1622847178 1988 RGENASAKslhsvvQTLESDKVKLELKVKNLELQLKENKRQL 2029
Cdd:COG4942 180 LAELEEER------AALEALKAERQKLLARLEKELAELAAEL 215
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1026-1365 |
4.60e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 4.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1026 AREENSGLLQELEELRKQADKAKSL-TYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIa 1104
Cdd:PLN02939 37 ARRRGFSSQQKKKRGKNIAPKQRSSnSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQ- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1105 llqgdQQKLWSVNETLNLEKEKFLEEKQDAEKH---------YEQEHLNKevLAVEREKLLKEINVAQEELLKINMENDS 1175
Cdd:PLN02939 116 -----QTNSKDGEQLSDFQLEDLVGMIQNAEKNilllnqarlQALEDLEK--ILTEKEALQGKINILEMRLSETDARIKL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1176 LQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILakdKDDI------IQKLQSSYEELVKDQK- 1248
Cdd:PLN02939 189 AAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLL---KDDIqflkaeLIEVAETEERVFKLEKe 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1249 -----ALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQ--------EKLNASLQAA-- 1313
Cdd:PLN02939 266 rslldASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEKAALVLDQnqdlrdkvDKLEASLKEAnv 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847178 1314 ----LQVKQLLRSEASGLRAQLDDAS-KALRKAELETMQLQATNTSLTKLLEEIKAR 1365
Cdd:PLN02939 346 skfsSYKVELLQQKLKLLEERLQASDhEIHSYIQLYQESIKEFQDTLSKLKEESKKR 402
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
623-862 |
4.70e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 4.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 623 ELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALrAKLMKVIKEKENSLEAIKSKLDKAEDQ---HLVEMEET--- 696
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI-ARKQNKYDELVEEAKTIKAEIEELTDEllnLVMDIEDPsaa 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 697 LNKLQEAEIKVK-ELEVLQ--AKCNEQTKVIDNFTSQLKATEEKLldldalqkasSEGKSEMEKLRQQLEAAEKQIKHLE 773
Cdd:PHA02562 257 LNKLNTAAAKIKsKIEQFQkvIKMYEKGGVCPTCTQQISEGPDRI----------TKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 774 iEKNAESSKASSITRELQGrelKLTNLQENLS-EVSQVKDtLEKELQILKEKFAEASEEAVSVQRSMQETVNKL--HQKE 850
Cdd:PHA02562 327 -EIMDEFNEQSKKLLELKN---KISTNKQSLItLVDKAKK-VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKseLVKE 401
|
250
....*....|..
gi 1622847178 851 EQFNMLSSDLEK 862
Cdd:PHA02562 402 KYHRGIVTDLLK 413
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1388-1763 |
5.40e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.33 E-value: 5.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1388 RRLLAEKEELLSENRIITEklhkcsEEAAHTEMS-----LNEKITYLTSEKEMAS----------QKMTKLKKHQDSLLK 1452
Cdd:COG3096 285 ERALELRRELFGARRQLAE------EQYRLVEMAreleeLSARESDLEQDYQAASdhlnlvqtalRQQEKIERYQEDLEE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1453 EKSALETQNGVL------LAERE----------NSIKA-IGDLKRQCDqESANRRIIVQENMKLLGN-----------ID 1504
Cdd:COG3096 359 LTERLEEQEEVVeeaaeqLAEAEarleaaeeevDSLKSqLADYQQALD-VQQTRAIQYQQAVQALEKaralcglpdltPE 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1505 ALKKELQERKNENQELVASKCDLSLMLKEAQNAKKnlekEHTHILQAKENLDAEL--NTCCSEKNILLRDSLNLQ---EE 1579
Cdd:COG3096 438 NAEDYLAAFRAKEQQATEEVLELEQKLSVADAARR----QFEKAYELVCKIAGEVerSQAWQTARELLRRYRSQQalaQR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1580 CQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMvLLEQEVEELRVCTEELqsekfvllqektksEQEVAEIIE 1659
Cdd:COG3096 514 LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAE-ELEELLAELEAQLEEL--------------EEQAAEAVE 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1660 EKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQlnhevtlaekaQVMQDNQNLLAEKSEMMLEKD 1739
Cdd:COG3096 579 QRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQ-----------EVTAAMQQLLEREREATVERD 647
|
410 420
....*....|....*....|....
gi 1622847178 1740 ELLKEKEMlaesyfiLQKEISQLA 1763
Cdd:COG3096 648 ELAARKQA-------LESQIERLS 664
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
975-1544 |
5.44e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 5.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 975 DLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREEnsglLQELEELRKQADKAKSLTY-- 1052
Cdd:pfam12128 269 SDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSE----LEALEDQHGAFLDADIETAaa 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1053 ---LLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSllsklvELEAKIALLQGDQQKLwsvnetlnleKEKFLE 1129
Cdd:pfam12128 345 dqeQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKE------QNNRDIAGIKDKLAKI----------REARDR 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1130 EKQDAEKHYEQEhlnKEVLAVEREKLLKEINVaQEELLKINMENDSLQASKVsmqTLIEELQLSKDALIAKTEKDQEERD 1209
Cdd:pfam12128 409 QLAVAEDDLQAL---ESELREQLEAGKLEFNE-EEYRLKSRLGELKLRLNQA---TATPELLLQLENFDERIERAREEQE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1210 HLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSN------------------- 1270
Cdd:pfam12128 482 AANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigkvispellh 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1271 ---LDNTCIALKVERDN----------ALQNNRDLQLEtDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASK- 1336
Cdd:pfam12128 562 rtdLDPEVWDGSVGGELnlygvkldlkRIDVPEWAASE-EELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASRe 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1337 ------ALRKAELETMQLQATNTSLT-KLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRiiTEKLH 1409
Cdd:pfam12128 641 etfartALKNARLDLRRLFDEKQSEKdKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREAR--TEKQA 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1410 KCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRqcdQESANR 1489
Cdd:pfam12128 719 YWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAV---RRQEVL 795
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1490 RIIVQENMKLLGNIDALKKELQERKNENQELvasKCDLSLMLKEAQNAKKNLEKE 1544
Cdd:pfam12128 796 RYFDWYQETWLQRRPRLATQLSNIERAISEL---QQQLARLIADTKLRRAKLEME 847
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1162-1396 |
6.04e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 6.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1162 AQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITEnfilAKDKDDIIQKLQSSYE 1241
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE----LAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1242 ELVKDQKALVQDIEDLTAekksALEKLSNLDNtcIALKVERDNALQNNRDLQLETDMLLHDQEKLNAsLQAALQVKQLLR 1321
Cdd:COG4942 94 ELRAELEAQKEELAELLR----ALYRLGRQPP--LALLLSPEDFLDAVRRLQYLKYLAPARREQAEE-LRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1322 SEASGLRAQLDDASKALRKAELEtmqLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEE 1396
Cdd:COG4942 167 AELEAERAELEALLAELEEERAA---LEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
765-1071 |
6.30e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 765 AEKQIKHLEieknaesskassitRELQGRELKLTNLQENLSEVSQVKDTLEKELQILkEKFAEASEEAVSVqrsmQETVN 844
Cdd:COG4913 608 NRAKLAALE--------------AELAELEEELAEAEERLEALEAELDALQERREAL-QRLAEYSWDEIDV----ASAER 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 845 KLHQKEEQFNML---SSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKER 921
Cdd:COG4913 669 EIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR 748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 922 YVEELQLKLTKANENASFLQKSIEDmTLKAEQSQQeaaekheeekkelERKLSDLEKKM----ETSHNQCQELKAGYEKA 997
Cdd:COG4913 749 ALLEERFAAALGDAVERELRENLEE-RIDALRARL-------------NRAEEELERAMrafnREWPAETADLDADLESL 814
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 998 TSetktkHEEILQNLRKT-LLDTEDKLKGAREENSGllQELEELRKQADKAKSltylltSAKKEIELMSEELRGL 1071
Cdd:COG4913 815 PE-----YLALLDRLEEDgLPEYEERFKELLNENSI--EFVADLLSKLRRAIR------EIKERIDPLNDSLKRI 876
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1597-1998 |
6.33e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 6.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1597 EQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSE--QEVAEIIEEKELLTAEAAQLAAH 1674
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1675 IKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQ----VMQDNQNLLAEKSEMMLEKDELLKEKEMLAE 1750
Cdd:COG4717 155 LEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEeleeLQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1751 SYFILQ-----KEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTE 1825
Cdd:COG4717 235 ELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALE 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1826 TLASLEdtkqtnakLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQlSALQEENVKLAE 1905
Cdd:COG4717 315 ELEEEE--------LEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA-ALLAEAGVEDEE 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1906 ELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKfiKDADEEKASLQKSISITSALLTEKDAELEKLRNEVT 1985
Cdd:COG4717 386 ELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE--EELEEELEELEEELEELEEELEELREELAELEAELE 463
|
410
....*....|...
gi 1622847178 1986 VLRGENASAKSLH 1998
Cdd:COG4717 464 QLEEDGELAELLQ 476
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
755-956 |
6.84e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 6.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 755 MEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFaeaseEAVS 834
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-----EKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 835 VQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEndiAEIMKMSGDNSSQLTKMND 914
Cdd:COG4717 123 KLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQDLAE 199
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1622847178 915 ELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 956
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAL 241
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1498-2032 |
7.55e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.63 E-value: 7.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1498 KLLGNIDALKKELQERKNENQelvaskcDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQ 1577
Cdd:TIGR04523 37 QLEKKLKTIKNELKNKEKELK-------NLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKIN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1578 EECqKLSEEIQEMQQSLILEQEARAKEKESSLYENNqlhGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEI 1657
Cdd:TIGR04523 110 SEI-KNDKEQKNKLEVELNKLEKQKKENKKNIDKFL---TEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1658 IEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLE 1737
Cdd:TIGR04523 186 QKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1738 KDELLKEKEMLAESYFILQKEISQLAKTNSHISAnlLESQNENRTLRKDKNKLTLKIRELETLQSFTAA--QTAEDAMQI 1815
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISD--LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQnnKIISQLNEQ 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1816 MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKelltvenQKMEEFRKEIETLKQAAAQKSQQLSA 1895
Cdd:TIGR04523 344 ISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE-------SQINDLESKIQNQEKLNQQKDEQIKK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1896 LQEENVKLAEELGRSRDEVTSHQK----LEEERSVLNNQLlemkKSLPSNTLRESKFIKDADEEKASLQKSISITSALLT 1971
Cdd:TIGR04523 417 LQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELII----KNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELK 492
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1972 EKDAELEKLRNEVTVLRGENASAK----SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 2032
Cdd:TIGR04523 493 SKEKELKKLNEEKKELEEKVKDLTkkisSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1722-2068 |
8.94e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1722 QDNQNLLAEKSEMMLEKDELLKEKEMLaESYFILQKEISQLAKTNSHISanllESQNENRTLRKDKNKLTLKIRELE--- 1798
Cdd:COG3206 64 QSSDVLLSGLSSLSASDSPLETQIEIL-KSRPVLERVVDKLNLDEDPLG----EEASREAAIERLRKNLTVEPVKGSnvi 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1799 --TLQSFTAAQTAEDAMQIMEQMTKEKTEtlASLEDTKQTNAKLQNELDTLKennlknveelnksKELLTVEnQKMEEFR 1876
Cdd:COG3206 139 eiSYTSPDPELAAAVANALAEAYLEQNLE--LRREEARKALEFLEEQLPELR-------------KELEEAE-AALEEFR 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1877 KE--IETLKQAAAQKSQQLSALQEENVKLAEELgrsrdevtshQKLEEERSVLNNQLLEMKKSLPSntLRESKFIKDADE 1954
Cdd:COG3206 203 QKngLVDLSEEAKLLLQQLSELESQLAEARAEL----------AEAEARLAALRAQLGSGPDALPE--LLQSPVIQQLRA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1955 EKASLQKSISITSALLTEKDAELEKLRNEVTVLRGEnaSAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSG 2034
Cdd:COG3206 271 QLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ--LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
330 340 350
....*....|....*....|....*....|....
gi 1622847178 2035 NTDTQADEDERAQESQQMIDFLnsvivdLQRKNQ 2068
Cdd:COG3206 349 LEAELRRLEREVEVARELYESL------LQRLEE 376
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
796-1660 |
9.46e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.65 E-value: 9.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 796 KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEME---A 872
Cdd:TIGR00606 183 RYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEhnlS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 873 KFREKDEREEQLIKAKEKLENDIAEI-MKMSGDNSSQLTKMND-------ELRLKERYVEELQLKLTKANENASFLQKS- 943
Cdd:TIGR00606 263 KIMKLDNEIKALKSRKKQMEKDNSELeLKMEKVFQGTDEQLNDlyhnhqrTVREKERELVDCQRELEKLNKERRLLNQEk 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 944 ------IEDMTLKAEQSQQEAAEKHEEEKKELERKL-------SDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQ 1010
Cdd:TIGR00606 343 tellveQGRLQLQADRHQEHIRARDSLIQSLATRLEldgfergPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKER 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1011 NLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGN------- 1083
Cdd:TIGR00606 423 LKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLtetlkke 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1084 --DLKLENGSLLSKLVELEAKIALLQGDQQklwSVNETLNLEKEKFLEEKQDAEKHYEQEHL---------NKEVLAVER 1152
Cdd:TIGR00606 503 vkSLQNEKADLDRKLRKLDQEMEQLNHHTT---TRTQMEMLTKDKMDKDEQIRKIKSRHSDEltsllgyfpNKKQLEDWL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1153 EKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDAL------IAKTEKDQEERDHLADQIKKLITENFILA 1226
Cdd:TIGR00606 580 HSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYedklfdVCGSQDEESDLERLKEEIEKSSKQRAMLA 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1227 KDKDDIIQKLQSSYEE----------LVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLET 1296
Cdd:TIGR00606 660 GATAVYSQFITQLTDEnqsccpvcqrVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSII 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1297 DMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELetmqLQATNTSLTKLLEEIKARRAVTDSECIQL 1376
Cdd:TIGR00606 740 DLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKV----CLTDVTIMERFQMELKDVERKIAQQAAKL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1377 lhEKETLAASERRLLAEKEELLSENRIIT---EKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKmtklkkhqdslLKE 1453
Cdd:TIGR00606 816 --QGSDLDRTVQQVNQEKQEKQHELDTVVskiELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTN-----------LQR 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1454 KSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASK--------- 1524
Cdd:TIGR00606 883 RQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIhgymkdien 962
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1525 -----CDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNT----CCSEKNILLRDSLNLQEECQKLSE-------EIQ 1588
Cdd:TIGR00606 963 kiqdgKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRqdidTQKIQERWLQDNLTLRKRENELKEveeelkqHLK 1042
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847178 1589 EMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVE-ELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEE 1660
Cdd:TIGR00606 1043 EMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEkEIKHFKKELREPQFRDAEEKYREMMIVMRTTEL 1115
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1430-1694 |
1.01e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1430 TSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKE 1509
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1510 LQERKNENQELVASkcdlslMLKEAQNAKKNLekehthILQAKENLDAelntccseknilLRDSLNLQEECQKLSEEIQE 1589
Cdd:COG4942 99 LEAQKEELAELLRA------LYRLGRQPPLAL------LLSPEDFLDA------------VRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1590 MQQSLileQEARAKEKEsslyennqlhgrmvlLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAA 1669
Cdd:COG4942 155 LRADL---AELAALRAE---------------LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELA 216
|
250 260
....*....|....*....|....*
gi 1622847178 1670 QLAAHIKTLKSDFAALSKSKAELQE 1694
Cdd:COG4942 217 ELQQEAEELEALIARLEAEAAAAAE 241
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
352-952 |
1.07e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.44 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 352 ALQEALKEKQQHIEQLLAER---DLERAEVAKA--------TSHVGEIEQELALARDGHDqhvlELEAKMDQLRTMVEAA 420
Cdd:pfam12128 312 AADAAVAKDRSELEALEDQHgafLDADIETAAAdqeqlpswQSELENLEERLKALTGKHQ----DVTAKYNRRRSKIKEQ 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 421 DREKVELLNQLEEEKRKVEDLQFRVEEesitkGDLEQKsqisEDPENVATVSEKSRIMELEKDLALRVqevAELRRRLES 500
Cdd:pfam12128 388 NNRDIAGIKDKLAKIREARDRQLAVAE-----DDLQAL----ESELREQLEAGKLEFNEEEYRLKSRL---GELKLRLNQ 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 501 NKPAGDVDMSLSLLQE-ISSLQEKLE---VTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSK--- 573
Cdd:pfam12128 456 ATATPELLLQLENFDErIERAREEQEaanAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQagt 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 574 -LEHANKEnsdvIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENlqnQQDSERSA 652
Cdd:pfam12128 536 lLHFLRKE----APDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEE---ELRERLDK 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 653 HAKEMEALRAKlmkvIKEKENSLEAIKSKLDKAEdqhlVEMEETLNKLQEAEIKVKELevlqakcneqtkvidnftsqlk 732
Cdd:pfam12128 609 AEEALQSAREK----QAAAEEQLVQANGELEKAS----REETFARTALKNARLDLRRL---------------------- 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 733 aTEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKH--------------------LEIEKNAESSKASSITRELQG 792
Cdd:pfam12128 659 -FDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKkhqawleeqkeqkreartekQAYWQVVEGALDAQLALLKAA 737
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 793 RELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEA 872
Cdd:pfam12128 738 IAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLS 817
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 873 KFREKDER-EEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDEL---RLKERYVEELQLKLT--KANENASFLQKSIED 946
Cdd:pfam12128 818 NIERAISElQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLrglRCEMSKLATLKEDANseQAQGSIGERLAQLED 897
|
....*.
gi 1622847178 947 MTLKAE 952
Cdd:pfam12128 898 LKLKRD 903
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
629-835 |
1.12e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 629 EKMRLDYQHEIENlqnqqDSERSAHAKEMEALRAKlmkvikekENSLEAIKSKLDKAEDQHLVE--------MEETLNKL 700
Cdd:COG2433 319 EKLHLAREYGYDN-----DHERDALAAALKAYDAY--------KNKFERVEKKVPPDVDRDEVKarvirglsIEEALEEL 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 701 QEAEIKVKELEVLQAKCNEQTkvidnftsQLKATEEKLLDLDALQKassEGKSEMEKLRQQLEAAEKQIKHLEIEKNAES 780
Cdd:COG2433 386 IEKELPEEEPEAEREKEHEER--------ELTEEEEEIRRLEEQVE---RLEAEVEELEAELEEKDERIERLERELSEAR 454
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 781 SKASS---ITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKE-KFAEASEEAVSV 835
Cdd:COG2433 455 SEERReirKDREISRLDREIERLERELEEERERIEELKRKLERLKElWKLEHSGELVPV 513
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1623-1775 |
1.16e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1623 EQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQL-AAHIKTLKSDFAALSKSKAELQELHSCLTK 1701
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEA 366
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 1702 ILDDLQLNHEVTLAE----KAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLE 1775
Cdd:COG4913 367 LLAALGLPLPASAEEfaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1643-2075 |
1.39e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1643 LLQEKTKSEQEVAEIIEEKElltaeAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLnhevTLAEKAQVMQ 1722
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKE-----EKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADE----VLEEHEERRE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1723 DNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELEtlqs 1802
Cdd:PRK02224 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELR---- 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1803 ftaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnnlknveELNKSKELLTVENQKMEEFRKEIETL 1882
Cdd:PRK02224 328 ----DRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELES-------ELEEAREAVEDRREEIEELEEEIEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1883 KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQ-KLEEERSVL--NNQLLEMKKSLPSNTLRESKFIKDADEEKasl 1959
Cdd:PRK02224 397 RERFGDAPVDLGNAEDFLEELREERDELREREAELEaTLRTARERVeeAEALLEAGKCPECGQPVEGSPHVETIEED--- 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1960 qksisitSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQ---LKENKRQLSSS---S 2033
Cdd:PRK02224 474 -------RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERretIEEKRERAEELrerA 546
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1622847178 2034 GNTDTQADE-DERAQESQQMIDFLNSVIVDLQRKNQDLKMKVE 2075
Cdd:PRK02224 547 AELEAEAEEkREAAAEAEEEAEEAREEVAELNSKLAELKERIE 589
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
713-890 |
1.41e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 43.53 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 713 LQAKCNEQTKVIDNFTSQLKATEEKLLDLD--------ALQKASSEGKSEMEKLRQQLEAAEKQIKH--LEIEKNAESSK 782
Cdd:PRK11637 73 LLAQLKKQEEAISQASRKLRETQNTLNQLNkqidelnaSIAKLEQQQAAQERLLAAQLDAAFRQGEHtgLQLILSGEESQ 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 783 ASSitREL-------QGRELKLTNLQENLSEVSQVKDTLE----KELQILKEKFAEAS--EEAVSV-QRSMQETVNKLHQ 848
Cdd:PRK11637 153 RGE--RILayfgylnQARQETIAELKQTREELAAQKAELEekqsQQKTLLYEQQAQQQklEQARNErKKTLTGLESSLQK 230
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1622847178 849 KEEQFNMLSSDLEKLRENL--AEMEAKFR-EKDEREEQLIKAKEK 890
Cdd:PRK11637 231 DQQQLSELRANESRLRDSIarAEREAKARaEREAREAARVRDKQK 275
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1286-1653 |
1.50e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.74 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1286 LQNNRDLQLETDmllHDQEKLNASLQAALQVKQLLRSEAS---GLRAQLDDASKALRKAELETMQ--LQATNTSLTKLLE 1360
Cdd:PLN02939 59 RSSNSKLQSNTD---ENGQLENTSLRTVMELPQKSTSSDDdhnRASMQRDEAIAAIDNEQQTNSKdgEQLSDFQLEDLVG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1361 EIKarravtDSECIQLLHEKETLAASER--RLLAEKEELLSENRIITEKLhkcSEEAAHTEMSLNEKItyltsEKEMASQ 1438
Cdd:PLN02939 136 MIQ------NAEKNILLLNQARLQALEDleKILTEKEALQGKINILEMRL---SETDARIKLAAQEKI-----HVEILEE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1439 KMTKLKKHqdslLKEKSALETQNGVLLAERENSIKaigdlkrqcdqesanrriivQENMKLLGNIDALKKELQERKNENQ 1518
Cdd:PLN02939 202 QLEKLRNE----LLIRGATEGLCVHSLSKELDVLK--------------------EENMLLKDDIQFLKAELIEVAETEE 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1519 ELVAskcdlslmlkeaqnakknLEKEHTHILQAKENLDAELNTccSEKNILLRDSlnLQEECqkLSEEIQEMQqsLILEQ 1598
Cdd:PLN02939 258 RVFK------------------LEKERSLLDASLRELESKFIV--AQEDVSKLSP--LQYDC--WWEKVENLQ--DLLDR 311
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847178 1599 EARAKEKESSLYENNQ-LHGRMVLLEQEVEELRVctEELQSEKFVLLQEKTKSEQE 1653
Cdd:PLN02939 312 ATNQVEKAALVLDQNQdLRDKVDKLEASLKEANV--SKFSSYKVELLQQKLKLLEE 365
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
729-1250 |
1.58e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.56 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 729 SQLKATEEKLLD----LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL 804
Cdd:pfam05483 99 AELKQKENKLQEnrkiIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYER 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 805 SEVSQV----KDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDER 880
Cdd:pfam05483 179 EETRQVymdlNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKD 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 881 EEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELrlkERYVEELQLKLTKA-------NENASFLQKSIEDMTLKAEQ 953
Cdd:pfam05483 259 LTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHL---TKELEDIKMSLQRSmstqkalEEDLQIATKTICQLTEEKEA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 954 SQQEAAEKHEEEK---KELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEiLQNLRKTLLDTE---DKLKGAR 1027
Cdd:pfam05483 336 QMEELNKAKAAHSfvvTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSE-LEEMTKFKNNKEvelEELKKIL 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1028 EENSGLLQELEELRKQAD----KAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKI 1103
Cdd:pfam05483 415 AEDEKLLDEKKQFEKIAEelkgKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHC 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1104 ALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKhyeqehlnkevlavEREKLLKEINVAQEELLKINMENDSLQaskvsm 1183
Cdd:pfam05483 495 DKLLLENKELTQEASDMTLELKKHQEDIINCKK--------------QEERMLKQIENLEEKEMNLRDELESVR------ 554
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1184 qtliEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSS---YEELVKDQKAL 1250
Cdd:pfam05483 555 ----EEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKnknIEELHQENKAL 620
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
761-956 |
1.58e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 761 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQ 840
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 841 ET-------------------------VNKLHQKE-EQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEND 894
Cdd:COG3883 97 RSggsvsyldvllgsesfsdfldrlsaLSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 895 IAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 956
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
813-930 |
1.67e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.69 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 813 TLEKELQILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDER----EEQLIKAK 888
Cdd:COG2433 377 SIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEAR 454
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1622847178 889 EKLENDI---AEIMKMSGDNsSQLTKmndELRLKERYVEELQLKL 930
Cdd:COG2433 455 SEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
336-534 |
1.72e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRT 415
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 416 MVEAADREKVELLNQLEEEKRKVEDLQFRVEEesiTKGDLEQKSQISEDPENVatvseksrimELEKDLALRVQE--VAE 493
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELDE---LQDRLEAAEDLARLELRA----------LLEERFAAALGDavERE 766
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1622847178 494 LRRRLESNKPAgdvdmslsLLQEISSLQEKLEVTRTDHQRE 534
Cdd:COG4913 767 LRENLEERIDA--------LRARLNRAEEELERAMRAFNRE 799
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1104-1794 |
1.83e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1104 ALLQGDQQKLWSVNETLNLEK-EKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQaskvs 1182
Cdd:PRK03918 139 AILESDESREKVVRQILGLDDyENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEIS----- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1183 mqtlIEELQLSKDalIAKTEKDQEERDHLADQIKKLITENFILAKDKDDI---IQKLQSSYEELVKDQKALVQDIEDLTA 1259
Cdd:PRK03918 214 ----SELPELREE--LEKLEKEVKELEELKEEIEELEKELESLEGSKRKLeekIRELEERIEELKKEIEELEEKVKELKE 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1260 EKKSALEKlsnldntcIALKVERDNALQNNRDLQLEtdmllhdqeklnaslqaalqvKQLLRSEASGLRAQLDDASKALR 1339
Cdd:PRK03918 288 LKEKAEEY--------IKLSEFYEEYLDELREIEKR---------------------LSRLEEEINGIEERIKELEEKEE 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1340 KAEletmqlqatntSLTKLLEEIKARRAVtdseciqlLHEKETLAASERRLLAEKEELLSENRIIT-EKLHKCSEEAAHT 1418
Cdd:PRK03918 339 RLE-----------ELKKKLKELEKRLEE--------LEERHELYEEAKAKKEELERLKKRLTGLTpEKLEKELEELEKA 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1419 EMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSAL--------ETQNGVLLAERENSIKAI-GDLKRQCDQESANR 1489
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcgreltEEHRKELLEEYTAELKRIeKELKEIEEKERKLR 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1490 RIIVQENMKLLGN--IDALKKELQERKNENQEL-VASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDaELNTCCSEK 1566
Cdd:PRK03918 480 KELRELEKVLKKEseLIKLKELAEQLKELEEKLkKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE-KLEELKKKL 558
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1567 NILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELqSEKFVLLQE 1646
Cdd:PRK03918 559 AELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-DKAFEELAE 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1647 KTKSEQEVAEIIEEKELLTAEA--AQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNhevtLAEKAQVMQDN 1724
Cdd:PRK03918 638 TEKRLEELRKELEELEKKYSEEeyEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEE----LEEREKAKKEL 713
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1725 QNLLAEKSEMMLEKDELLKEKEMLAESYFilqKEISQLAktnSHISANLLESQNENRTLRKDKNKLTLKI 1794
Cdd:PRK03918 714 EKLEKALERVEELREKVKKYKALLKERAL---SKVGEIA---SEIFEELTEGKYSGVRVKAEENKVKLFV 777
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
1502-1678 |
1.89e-03 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 42.82 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1502 NIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKnlekehthiLQAKENLDAELNTCCSEKNILLRDSLNLQEECQ 1581
Cdd:pfam09787 1 NLESAKQELADYKQKAARILQSKEKLIASLKEGSGVEG---------LDSSTALTLELEELRQERDLLREEIQKLRGQIQ 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1582 KLSEEIQEMQQSLilEQEARAKEKESSLYENNQLHGRMVLLEQEVE------ELRVCTEELQSEKFVL---LQEKTKSEQ 1652
Cdd:pfam09787 72 QLRTELQELEAQQ--QEEAESSREQLQELEEQLATERSARREAEAElerlqeELRYLEEELRRSKATLqsrIKDREAEIE 149
|
170 180
....*....|....*....|....*.
gi 1622847178 1653 EVAEIIEEKELLTAEAAQLAAHIKTL 1678
Cdd:pfam09787 150 KLRNQLTSKSQSSSSQSELENRLHQL 175
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
757-917 |
1.94e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 757 KLRQQLEAAEKQIKHL--EIEKNAESSKassitrelqgrELKLTNLQEnlsEVSQVKDTLEKELqilKEKFAEaseeavs 834
Cdd:PRK12704 28 IAEAKIKEAEEEAKRIleEAKKEAEAIK-----------KEALLEAKE---EIHKLRNEFEKEL---RERRNE------- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 835 vqrsMQETVNKLHQKEEQFNMLSSDLEKLRENL----AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ-- 908
Cdd:PRK12704 84 ----LQKLEKRLLQKEENLDRKLELLEKREEELekkeKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAKEil 159
|
....*....
gi 1622847178 909 LTKMNDELR 917
Cdd:PRK12704 160 LEKVEEEAR 168
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
387-765 |
2.33e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.35 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 387 EIEQELALARDGHDQHvLELEAKMDQL---RTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISE 463
Cdd:PRK01156 326 AIIKKLSVLQKDYNDY-IKKKSRYDDLnnqILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDP 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 464 DPENVATVSEKSRIMELEKDLALRVQEVAELRRRLesnkpagdvdMSLSLLQEISSLQEKLEVTRTDHQRE-ITSLKEHF 542
Cdd:PRK01156 405 DAIKKELNEINVKLQDISSKVSSLNQRIRALRENL----------DELSRNMEMLNGQSVCPVCGTTLGEEkSNHIINHY 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 543 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIAShqqaMEELKVSFSKgLGTETAEFA 622
Cdd:PRK01156 475 NEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARAD----LEDIKIKINE-LKDKHDKYE 549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 623 ELKTQIEKMRLdyqheiENLQNQQDSERSAHAK----EMEALRAK---LMKVIKEKENSLEAIKSKLDKAE---DQHLVE 692
Cdd:PRK01156 550 EIKNRYKSLKL------EDLDSKRTSWLNALAVisliDIETNRSRsneIKKQLNDLESRLQEIEIGFPDDKsyiDKSIRE 623
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847178 693 MEETLNKLQEaeiKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAA 765
Cdd:PRK01156 624 IENEANNLNN---KYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDA 693
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1787-1923 |
2.50e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1787 KNKLTLKIRELEtlqsFTAAQTAEDAMQIMEQMTKE-----KTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1861
Cdd:PRK12704 26 KKIAEAKIKEAE----EEAKRILEEAKKEAEAIKKEalleaKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRK 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847178 1862 KELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL-GRSRDEVTSH--QKLEEE 1923
Cdd:PRK12704 102 LELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIsGLTAEEAKEIllEKVEEE 166
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1213-1954 |
2.58e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.03 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1213 DQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDltaeKKSALEKLSNLDNTCIALKVERDNALQNNRDL 1292
Cdd:TIGR00618 176 DQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHE----RKQVLEKELKHLREALQQTQQSHAYLTQKREA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1293 QLETDMLlhdqEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELetmqlQATNTSLTKLLEEIKARRAVTDSE 1372
Cdd:TIGR00618 252 QEEQLKK----QQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAH-----IKAVTQIEQQAQRIHTELQSKMRS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1373 CIQLLHEKETLAASE------RRLLAEKEELLSENRIITEKlHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKH 1446
Cdd:TIGR00618 323 RAKLLMKRAAHVKQQssieeqRRLLQTLHSQEIHIRDAHEV-ATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1447 QDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQcDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCD 1526
Cdd:TIGR00618 402 LDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQ-QRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1527 LSLMLKEAQnakknleKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAkEKE 1606
Cdd:TIGR00618 481 IHLQETRKK-------AVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYH-QLT 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1607 SSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAE--AAQLAAHIKTLKSDFAA 1684
Cdd:TIGR00618 553 SERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEqhALLRKLQPEQDLQDVRL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1685 LSKSKA-ELQELHSCLTKILDDL--QLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQ 1761
Cdd:TIGR00618 633 HLQQCSqELALKLTALHALQLTLtqERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETH 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1762 LAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEkTETLASLEDTKQTNAKLQ 1841
Cdd:TIGR00618 713 IEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAA-LQTGAELSHLAAEIQFFN 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1842 NELDTLkennlknveeLNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLE 1921
Cdd:TIGR00618 792 RLREED----------THLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQL 861
|
730 740 750
....*....|....*....|....*....|....*...
gi 1622847178 1922 EERSVLNNQLLEMKKSLP-----SNTLRESKFIKDADE 1954
Cdd:TIGR00618 862 AQLTQEQAKIIQLSDKLNginqiKIQFDGDALIKFLHE 899
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
513-1086 |
2.73e-03 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 42.75 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 513 LLQEISSLQEKLEVTRTDHQREITSLKEHFGAR-EETHQKEIKALYTATEKLSKENESLKsKLEHANKENSDVIALWKSK 591
Cdd:COG5244 84 GLVCESKGMDKDGEIKQENHEDRIHFEESKIRRlEETIEALKSTEKEEIVELRRENEELD-KINLSLRERISSEEPELNK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 592 LETAIASHQ--QAMEELKVsfskgLGTETAEFAELKTQIEKMRLDYQheienLQNQQDSERSAHAKEMEALRAKLMKVIK 669
Cdd:COG5244 163 DGSKLSYDElkEFVEESRV-----QVYDMVELVSDISETLNRNGSIQ-----RSSVRECERSNIHDVLFLVNGILDGVID 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 670 EKENSLEAIKSKLDKAEDQHLVEMEE------TLNKLQEAEIKVKEL--EVLQAKCNEQTKVIDNFTSQlKATEEKLLDL 741
Cdd:COG5244 233 ELNGELERLRRQLVSLMSSHGIEVEEnsrlkaTLEKFQSLELKVNTLqeELYQNKLLKKFYQIYEPFAQ-AALSSQLQYL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 742 DALQKASSEGKSEMEKLRQ--QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLtNLQENLS-EVSQVKDTLEKEL 818
Cdd:COG5244 312 AEVIESENFGKLENIEIHIilKVLSSISYALHIYTIKNTPDHLETTLQCFVNIAPISM-WLSEFLQrKFSSKQETAFSIC 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 819 QILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEA----KFREKDEREEQLIKAKEKLEND 894
Cdd:COG5244 391 QFLEDN--KDVTLILKILHPILETTVPKLLAFLRTNSNFNDNDTLCLIGSLYEIaridKLIGKEEISKQDNRLFLYPSCD 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 895 IAEIMKMS---GDNSSQLTKMNDELRLKERYVEEL---QLKLTKANENASFLQKSIEDMTLKaeqsqqeaaekheeekke 968
Cdd:COG5244 469 ITLSSILTilfSDKLEVFFQGIESLLENITIFPEQpsqQTSDSENIKENSLLSDRLNEENIR------------------ 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 969 lerklsdLEKKMETSHNQC-QELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1047
Cdd:COG5244 531 -------LKEVLVQKENMLtEETKIKIIIGRDLERKTLEENIKTLKVELNNKNNKLKEENFNLVNRLKNMELKLYQIKDN 603
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1622847178 1048 KSLTYL---LTSAKKEIELMSEELRGLKSEKQLLSQEGNDLK 1086
Cdd:COG5244 604 NTLNKIyldLVSEIMELRETIRRQIKEQKRVSIDFSWLDELK 645
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1359-2104 |
2.78e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.11 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1359 LEEIKARRAVTDSECIQLLHEKETLAASERRLLaEKEELLSENRIITEKLHKCSEEAAHtEMSLNEKITYLTSEKEMA-- 1436
Cdd:TIGR00606 247 LDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKK-QMEKDNSELELKMEKVFQGTDEQLN-DLYHNHQRTVREKERELVdc 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1437 SQKMTKLKKHQDSLLKEKSALETQNGVLlaerensikaigDLKRQCDQESANRRIIVQENMKLLGNIDALKKE-LQERKN 1515
Cdd:TIGR00606 325 QRELEKLNKERRLLNQEKTELLVEQGRL------------QLQADRHQEHIRARDSLIQSLATRLELDGFERGpFSERQI 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1516 ENqelvASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQS-- 1593
Cdd:TIGR00606 393 KN----FHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLeg 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1594 -----LILEQEARAKEKESSLYENNQLhgrmvlleqeVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTaea 1668
Cdd:TIGR00606 469 ssdriLELDQELRKAERELSKAEKNSL----------TETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRT--- 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1669 aqlaahiktlksDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEML 1748
Cdd:TIGR00606 536 ------------QMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1749 AESYFILQKEISQLAKTNSHISANLLE---SQNENRTLRKDKNKLTLKIRELETLQSFTAAQTaedamQIMEQMTKEKTE 1825
Cdd:TIGR00606 604 EQNKNHINNELESKEEQLSSYEDKLFDvcgSQDEESDLERLKEEIEKSSKQRAMLAGATAVYS-----QFITQLTDENQS 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1826 TLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAE 1905
Cdd:TIGR00606 679 CCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNR 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1906 ELGRSRDEVTSHQKL-------EEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKAS-LQKSISITSALLTEKDAEL 1977
Cdd:TIGR00606 759 DIQRLKNDIEEQETLlgtimpeEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSdLDRTVQQVNQEKQEKQHEL 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1978 EKLRNEVTVLRG----ENASAKSLHSVVQTLESDKVKLELKVKNLElQLKENKRQLSS--SSGNTDTQADEDERAQESQQ 2051
Cdd:TIGR00606 839 DTVVSKIELNRKliqdQQEQIQHLKSKTNELKSEKLQIGTNLQRRQ-QFEEQLVELSTevQSLIREIKDAKEQDSPLETF 917
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 2052 MIDFLNSVIVDLQRKNQDLK---MKVEMMSEAALN--GNGDDLNNYDSDDQEKQSKKK 2104
Cdd:TIGR00606 918 LEKDQQEKEELISSKETSNKkaqDKVNDIKEKVKNihGYMKDIENKIQDGKDDYLKQK 975
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1233-1460 |
2.93e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1233 IQKLQSSYEELVKDQKALVQdiedlTAEKKSALEKLSNLDNTCIALKVERD--NALQNNRDL---QLETDMLLHDQEKLN 1307
Cdd:COG4913 227 ADALVEHFDDLERAHEALED-----AREQIELLEPIRELAERYAAARERLAelEYLRAALRLwfaQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1308 ASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETM-QLQATNTSLTKLLEEIKARRAVTDSECIQLlheKETLAAS 1386
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLeQLEREIERLERELEERERRRARLEALLAAL---GLPLPAS 378
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 1387 ERRLLAEKEELLSENRIITEKLHKCSEEAAhtemslnekityltsekeMASQKMTKLKKHQDSLLKEKSALETQ 1460
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALA------------------EAEAALRDLRRELRELEAEIASLERR 434
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
675-934 |
3.03e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.97 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 675 LEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNeqtkvidnftsqlkATEEKLLDLDALQKASSEGKSE 754
Cdd:PLN02939 130 LEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKIN--------------ILEMRLSETDARIKLAAQEKIH 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 755 MEKLRQQLeaaEKQIKHLEIEKNAESSKASSITRELQgrELKLTNLqenlsevsqvkdTLEKELQILKEKFAEaseeavs 834
Cdd:PLN02939 196 VEILEEQL---EKLRNELLIRGATEGLCVHSLSKELD--VLKEENM------------LLKDDIQFLKAELIE------- 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 835 vqrsMQETVNKLHQKEEQFNMLSSDLEklrenlaEMEAKFREKDEREEQLIKAK-----EKLEN--DIAEIMKMSGDNSS 907
Cdd:PLN02939 252 ----VAETEERVFKLEKERSLLDASLR-------ELESKFIVAQEDVSKLSPLQydcwwEKVENlqDLLDRATNQVEKAA 320
|
250 260
....*....|....*....|....*..
gi 1622847178 908 QLTKMNDELRLKeryVEELQLKLTKAN 934
Cdd:PLN02939 321 LVLDQNQDLRDK---VDKLEASLKEAN 344
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
754-923 |
3.39e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.76 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 754 EMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElqgrelKLTNLQENLSEvsqvkdtLEKELQILKEKFAEASEEAV 833
Cdd:COG0542 405 EIDSKPEELDELERRLEQLEIEKEALKKEQDEASFE------RLAELRDELAE-------LEEELEALKARWEAEKELIE 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 834 SVQRSMQEtvnkLHQKEEQFNMLSSDLEKLRENLAEMEAKFREK-DereeqlikakeklENDIAEIM---------KMSG 903
Cdd:COG0542 472 EIQELKEE----LEQRYGKIPELEKELAELEEELAELAPLLREEvT-------------EEDIAEVVsrwtgipvgKLLE 534
|
170 180
....*....|....*....|
gi 1622847178 904 DNSSQLTKMNDElrLKERYV 923
Cdd:COG0542 535 GEREKLLNLEEE--LHERVI 552
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
422-866 |
3.47e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.73 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 422 REKVELLNQLEEEKRKVEDLQfrveeESITKGDLEQKSQISEDPENVATVSEKSRIMELEKdLALRVQEVAELRRRLESN 501
Cdd:TIGR01612 1304 REKSLKIIEDFSEESDINDIK-----KELQKNLLDAQKHNSDINLYLNEIANIYNILKLNK-IKKIIDEVKEYTKEIEEN 1377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 502 KP--AGDVDMSLSLLQEI---SSLQE---KLEVTRTDHQ-----REITSLKEHFGAREETHQKeikalYTATEKLSKENE 568
Cdd:TIGR01612 1378 NKniKDELDKSEKLIKKIkddINLEEcksKIESTLDDKDideciKKIKELKNHILSEESNIDT-----YFKNADENNENV 1452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 569 SLKSK-LEHANKENSDVIalwKSKLETAIASHQQAMEELKVSFSKGLGTETaEFAELKTQIEKMRLDYQheienlQNQQD 647
Cdd:TIGR01612 1453 LLLFKnIEMADNKSQHIL---KIKKDNATNDHDFNINELKEHIDKSKGCKD-EADKNAKAIEKNKELFE------QYKKD 1522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 648 SERSAHAKEMEALRAKLMKVIKEKENSLEAIKskldKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNF 727
Cdd:TIGR01612 1523 VTELLNKYSALAIKNKFAKTKKDSEIIIKEIK----DAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDI 1598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 728 TSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKA-----SSITRELQGRELKLTNLQE 802
Cdd:TIGR01612 1599 QLSLENFENKFLKISDIKKKINDCLKETESIEKKISSFSIDSQDTELKENGDNLNSlqeflESLKDQKKNIEDKKKELDE 1678
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 803 NLSEVSQVKDTLEKE--------LQILKEKFAEASEEAVSVQRSMQETVNKLhqkEEQFNmlSSDLEKLREN 866
Cdd:TIGR01612 1679 LDSEIEKIEIDVDQHkknyeigiIEKIKEIAIANKEEIESIKELIEPTIENL---ISSFN--TNDLEGIDPN 1745
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1839-2051 |
3.67e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.62 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1839 KLQNELDTLKEN-NLKNVEELNKSKELLTVENQKME-EFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS 1916
Cdd:COG1196 217 ELKEELKELEAElLLLKLRELEAELEELEAELEELEaELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1917 HQKLEEERSV-------LNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRG 1989
Cdd:COG1196 297 LARLEQDIARleerrreLEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 1990 ENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQ 2051
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
735-1018 |
3.96e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.59 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 735 EEKLLDLDALQKAssegKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElQGRELKLTNLQENLSEVSQvkdtl 814
Cdd:PRK11281 66 EQTLALLDKIDRQ----KEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE-TLSTLSLRQLESRLAQTLD----- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 815 ekELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEnd 894
Cdd:PRK11281 136 --QLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQ-- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 895 iaeimKMSGDNSSQLTkmndELRLKERyvEELQLKLTKANENASFLQKSIEDMTLkaEQSQQEAAEKHEEEKKELERKLS 974
Cdd:PRK11281 212 -----RKSLEGNTQLQ----DLLQKQR--DYLTARIQRLEHQLQLLQEAINSKRL--TLSEKTVQEAQSQDEAARIQANP 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1622847178 975 DLEKKMETSHNQCQELKAGYEKATSETKtkheeilQNLR-KTLLD 1018
Cdd:PRK11281 279 LVAQELEINLQLSQRLLKATEKLNTLTQ-------QNLRvKNWLD 316
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
619-928 |
4.07e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.15 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 619 AEFAELKTQIEKMRLdyqhEIENLQNQQDSERsahaKEMEALRAKLMKVIKEKENSLEAIKSKLDKAED----------- 687
Cdd:pfam06160 107 EELDELLESEEKNRE----EVEELKDKYRELR----KTLLANRFSYGPAIDELEKQLAEIEEEFSQFEEltesgdylear 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 688 QHLVEMEETLNKLQEAEIKVKEL-EVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQkassegksEMEKLRQQLEAAE 766
Cdd:pfam06160 179 EVLEKLEEETDALEELMEDIPPLyEELKTELPDQLEELKEGYREMEEEGYALEHLNVDK--------EIQQLEEQLEENL 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 767 KQIKHLEIEKNAESSKA---------SSITRELQGR---ELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVS 834
Cdd:pfam06160 251 ALLENLELDEAEEALEEieeridqlyDLLEKEVDAKkyvEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELER 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 835 VQrsmqetvnklhQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSS------- 907
Cdd:pfam06160 331 VR-----------GLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSLRKdeleare 399
|
330 340
....*....|....*....|.
gi 1622847178 908 QLTKMNDELRLKERYVEELQL 928
Cdd:pfam06160 400 KLDEFKLELREIKRLVEKSNL 420
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
732-945 |
4.67e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 732 KATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVK 811
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 812 DTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREeqLIKAKEKL 891
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1622847178 892 ENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIE 945
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDAL 242
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1354-1885 |
5.23e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1354 SLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEkLHKCSEEAAHTEMSLNEKITYLTSEK 1433
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE-LEERIEELKKEIEELEEKVKELKELK 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1434 EMAsQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLK---------RQCDQESANRRIIVQENMKLLGNID 1504
Cdd:PRK03918 290 EKA-EEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEekeerleelKKKLKELEKRLEELEERHELYEEAK 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1505 ALKKELQERKNENQELvaSKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLD---AELNTCCSE------KNILLRDSLN 1575
Cdd:PRK03918 369 AKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGELKkeiKELKKAIEElkkakgKCPVCGRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1576 LQEECQKLSEEIQEMQQslILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSekfvlLQEKTKS--EQE 1653
Cdd:PRK03918 447 EEHRKELLEEYTAELKR--IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKE-----LEEKLKKynLEE 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1654 VAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQlnhevtlaekaqvmqdnqNLLAEKSE 1733
Cdd:PRK03918 520 LEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELA------------------ELLKELEE 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1734 MMLEKDELLKEKEMLAESYFilqKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSftaaqtaedam 1813
Cdd:PRK03918 582 LGFESVEELEERLKELEPFY---NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRK----------- 647
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847178 1814 QIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1885
Cdd:PRK03918 648 ELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKA 719
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
563-817 |
5.29e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 5.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 563 LSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELKvsfsKGLGTETAEFAELKTQIEKMRLDYQHEIENL 642
Cdd:PHA02562 165 LSEMDKLNKDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQR----KKNGENIARKQNKYDELVEEAKTIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 643 QNqqdsERSAHAKEMEALRAKLMKVikekENSLEAIKSKLDK-AEDQHLVE-----------MEETLNKLQEAEIKVKEL 710
Cdd:PHA02562 240 TD----ELLNLVMDIEDPSAALNKL----NTAAAKIKSKIEQfQKVIKMYEkggvcptctqqISEGPDRITKIKDKLKEL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 711 evlqakcneqTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEieknAESSKASSitrEL 790
Cdd:PHA02562 312 ----------QHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVK----AAIEELQA---EF 374
|
250 260
....*....|....*....|....*..
gi 1622847178 791 QGRELKLTNLQENLSEVSQVKDTLEKE 817
Cdd:PHA02562 375 VDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
614-829 |
5.34e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 614 LGTETAEFAELKTQIEKMRLDYQHEIENLQ---NQQDSERSAHAKEMEALRAKLMKV---IKEKENSLEAIKSKLDKAED 687
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEkelAALKKEEKALLKQLAALERRIAALarrIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 688 QhLVEMEETLNKLQEAeikVKELEVLQAKCNEQTKV------------------IDNFTSQLKATEEKL-LDLDALQKAS 748
Cdd:COG4942 91 E-IAELRAELEAQKEE---LAELLRALYRLGRQPPLalllspedfldavrrlqyLKYLAPARREQAEELrADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 749 SEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEA 828
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
.
gi 1622847178 829 S 829
Cdd:COG4942 247 G 247
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1496-1899 |
5.72e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1496 NMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKEN---------LDAELNTCCSEK 1566
Cdd:COG4717 69 NLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLlplyqeleaLEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1567 NIL---LRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSL----YENNQLHGRMVLLEQEVEELRVCTEELQSE 1639
Cdd:COG4717 149 EELeerLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELqdlaEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1640 KFVLlqEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQ 1719
Cdd:COG4717 229 LEQL--ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1720 VMQ-------DNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTL 1792
Cdd:COG4717 307 LQAlpaleelEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1793 KIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNlKNVEELNKSKELLTVENQKM 1872
Cdd:COG4717 387 LRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELE-EELEELREELAELEAELEQL 465
|
410 420
....*....|....*....|....*..
gi 1622847178 1873 EEfRKEIETLKQAAAQKSQQLSALQEE 1899
Cdd:COG4717 466 EE-DGELAELLQELEELKAELRELAEE 491
|
|
| COG4026 |
COG4026 |
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General ... |
1012-1169 |
5.79e-03 |
|
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General function prediction only];
Pssm-ID: 443204 [Multi-domain] Cd Length: 287 Bit Score: 40.87 E-value: 5.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1012 LRKTLLDTEDKLKGAREENSGLLQELEELrkqadkaksltylltsaKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGS 1091
Cdd:COG4026 133 LREELLELKEKIDEIAKEKEKLTKENEEL-----------------ESELEELREEYKKLREENSILEEEFDNIKSEYSD 195
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847178 1092 LLSKLVELEAKIALLQGDQQKLWsvnetlnleKEKFLEEKQDAEKHYE-QEHLNKEVLAVEREKLLKEINVAQEELLKI 1169
Cdd:COG4026 196 LKSRFEELLKKRLLEVFSLEELW---------KELFPEELPEEDFIYFaTENLKPGKIIVGQGYIAAESKEDAEEWLKI 265
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1575-1912 |
5.87e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 5.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1575 NLQEECQKlseEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEV 1654
Cdd:pfam07888 34 NRLEECLQ---ERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1655 AEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQelhscltkilddlqlnhevtlAEKAQVMQDNQNLLAEKSEM 1734
Cdd:pfam07888 111 EELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERE---------------------TELERMKERAKKAGAQRKEE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1735 MLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELE-TLQSFTAAQTAEDAM 1813
Cdd:pfam07888 170 EAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEaLLEELRSLQERLNAS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1814 QIMEQMTKEKTETLASLEDTKQTN---AKLQNELDTLK--ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQ 1888
Cdd:pfam07888 250 ERKVEGLGEELSSMAAQRDRTQAElhqARLQAAQLTLQlaDASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQR 329
|
330 340
....*....|....*....|....
gi 1622847178 1889 KSQQLSALQEENVKLAEELGRSRD 1912
Cdd:pfam07888 330 LEERLQEERMEREKLEVELGREKD 353
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
728-895 |
6.05e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 41.55 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 728 TSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEV 807
Cdd:pfam05667 310 NEAPAATSSPPTKVETEEELQQQREEELEELQEQLEDLESSIQELEKEIKKLESSIKQVEEELEELKEQNEELEKQYKVK 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 808 SQVKDTL---EKELQILKEKFAEASEEAVSVQRSMQET----VNKLHQ-KEEQFNMLS------SDLEKLRENLAEMEAK 873
Cdd:pfam05667 390 KKTLDLLpdaEENIAKLQALVDASAQRLVELAGQWEKHrvplIEEYRAlKEAKSNKEDesqrklEEIKELREKIKEVAEE 469
|
170 180
....*....|....*....|..
gi 1622847178 874 FREKDEREEQLIKAKEKLENDI 895
Cdd:pfam05667 470 AKQKEELYKQLVAEYERLPKDV 491
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1170-1399 |
6.43e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1170 NMENDSLQASKVSMQTLIEELQ---------LSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSY 1240
Cdd:PRK05771 5 RMKKVLIVTLKSYKDEVLEALHelgvvhiedLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1241 EELVKDQKALVQDIEDltaEKKSALEKLSNLDNTCIALKVERdNALQNNRDLQLETDMLLH-----------DQEKLNAS 1309
Cdd:PRK05771 85 EELIKDVEEELEKIEK---EIKELEEEISELENEIKELEQEI-ERLEPWGNFDLDLSLLLGfkyvsvfvgtvPEDKLEEL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1310 LQAALQVKQLLRSEASG--------LRAQLDDASKALRKAELETMQLQATNTsLTKLLEEIKARRAVTDSECIQLLHEKE 1381
Cdd:PRK05771 161 KLESDVENVEYISTDKGyvyvvvvvLKELSDEVEEELKKLGFERLELEEEGT-PSELIREIKEELEEIEKERESLLEELK 239
|
250
....*....|....*...
gi 1622847178 1382 TLAASERRLLAEKEELLS 1399
Cdd:PRK05771 240 ELAKKYLEELLALYEYLE 257
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
860-1366 |
6.44e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 6.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 860 LEKLRENLAEMEakfrEKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKltkanenasf 939
Cdd:COG4717 73 LKELEEELKEAE----EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALE---------- 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 940 lqksiedMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDT 1019
Cdd:COG4717 139 -------AELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAEL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1020 EDKLKGAREENSGLLQELEELRKQAdkaksltylltSAKKEIELMSEELRGLKSEKQLLSQEGNDlklenGSLLSKLVEL 1099
Cdd:COG4717 212 EEELEEAQEELEELEEELEQLENEL-----------EAAALEERLKEARLLLLIAAALLALLGLG-----GSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1100 EAKIALLQGdqqKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQAS 1179
Cdd:COG4717 276 AGVLFLVLG---LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1180 KVSMQTLIEELQLskdaliaktekdqeerDHLADQIKKLITENFilAKDKDDIIQKLQsSYEELVKDQKALVQDIEDLTA 1259
Cdd:COG4717 353 LREAEELEEELQL----------------EELEQEIAALLAEAG--VEDEEELRAALE-QAEEYQELKEELEELEEQLEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1260 EKKSALEKLSNLDNTciALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLlrseaSGLRAQLDDASKALR 1339
Cdd:COG4717 414 LLGELEELLEALDEE--ELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGEL-----AELLQELEELKAELR 486
|
490 500
....*....|....*....|....*..
gi 1622847178 1340 KAELETMQLQATNTSLTKLLEEIKARR 1366
Cdd:COG4717 487 ELAEEWAALKLALELLEEAREEYREER 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1231-1440 |
6.86e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 6.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1231 DIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASL 1310
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1311 QA--ALQVKQLLRSEASGLRAQL------DDASKALRKAEL----------ETMQLQATNTSLTKLLEEIKARRAVTDSE 1372
Cdd:COG4942 100 EAqkEELAELLRALYRLGRQPPLalllspEDFLDAVRRLQYlkylaparreQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847178 1373 CIQLLHEKETLAAserrLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKM 1440
Cdd:COG4942 180 LAELEEERAALEA----LKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
421-898 |
7.44e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.60 E-value: 7.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 421 DREKVELL---NQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEKDLALRVQEVAELRRR 497
Cdd:COG5022 857 AKKRFSLLkkeTIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKL 936
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 498 LE-------SNKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREITSLKEHFGaREETHQKEIKALYTATEKLSKENESL 570
Cdd:COG5022 937 LNnidleegPSIEYVKLPELNKLHEVESKLKETSE----EYEDLLKKSTILVR-EGNKANSELKNFKKELAELSKQYGAL 1011
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 571 ---KSKLEHANKENSDVIALWK-SKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKmRLDYQHEIENLQNQQ 646
Cdd:COG5022 1012 qesTKQLKELPVEVAELQSASKiISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRREN-SLLDDKQLYQLESTE 1090
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 647 DSERSAHAKEMEALRAKLMKVIKEKE-NSLEAIKSKLDKAED----QHLVEMEETLNKLQEAEIKVKELEVLQAkcNEQT 721
Cdd:COG5022 1091 NLLKTINVKDLEVTNRNLVKPANVLQfIVAQMIKLNLLQEISkflsQLVNTLEPVFQKLSVLQLELDGLFWEAN--LEAL 1168
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 722 KVIDNFTSQLkatEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKH---LEIEKNAESSKASSITRELQ-GRELKL 797
Cdd:COG5022 1169 PSPPPFAALS---EKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSgwpRGDKLKKLISEGWVPTEYSTsLKGFNN 1245
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 798 TNLQENLSEVSQVKDTLEKELQI---LKEKFAEASEEAVSVQRSMQetvnklHQKEEQFNMLSSDLEKLR--------EN 866
Cdd:COG5022 1246 LNKKFDTPASMSNEKLLSLLNSIdnlLSSYKLEEEVLPATINSLLQ------YINVGLFNALRTKASSLRwksatevnYN 1319
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1622847178 867 LAEMEAKFREK-----DEREEQLI---KAKEKLENDIAEI 898
Cdd:COG5022 1320 SEELDDWCREFeisdvDEELEELIqavKVLQLLKDDLNKL 1359
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1645-1887 |
9.78e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 9.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1645 QEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDN 1724
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1725 QNLLAEKSEMMlekDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQsft 1804
Cdd:COG4942 100 EAQKEELAELL---RALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER--- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847178 1805 aaqtaedamQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQ 1884
Cdd:COG4942 174 ---------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
...
gi 1622847178 1885 AAA 1887
Cdd:COG4942 245 AAG 247
|
|
| |
