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Conserved domains on  [gi|1622838765|ref|XP_028683754|]
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seizure 6-like protein isoform X4 [Macaca mulatta]

Protein Classification

CUB domain-containing protein( domain architecture ID 12870549)

CUB (complement C1r/C1s, Uegf, Bmp1) domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 622-730 1.41e-25

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


:

Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 102.11  E-value: 1.41e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  622 CGGELSA-VAGVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNS 695
Cdd:cd00041      1 CGGTLTAsTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSpncsyDYLEIYDGPSTSSPLLGRFCGST 80

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  696 GPQKLYSSTPDLTIQFHSDPAglifGKGQGFIMNY 730
Cdd:cd00041     81 LPPPIISSGNSLTVRFRSDSS----VTGRGFKATY 111
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 446-555 1.17e-21

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


:

Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 90.93  E-value: 1.17e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  446 CGGTVHNATIGRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSLH-----DKDRMTVHSGQTNKSALLyDSLQTE 520
Cdd:cd00041      1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLEsspncSYDYLEIYDGPSTSSPLL-GRFCGS 79

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  521 SVPFEgLLSEGDTIRIEFTSDQARAASTFNIRFEA 555
Cdd:cd00041     80 TLPPP-IISSGNSLTVRFRSDSSVTGRGFKATYSA 113
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 738-937 2.64e-14

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 74.30  E-value: 2.64e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  738 SCSDLP------EIQNGWKTTSHTELVRGARITYQCDPGY--DIVGSDTLTCQ---WDLswssdppFCEKIMY-CTDPGE 805
Cdd:PHA02927    19 SCCTIPsrpinmKFKNSVETDANANYNIGDTIEYLCLPGYrkQKMGPIYAKCTgtgWTL-------FNQCIKRrCPSPRD 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  806 VDHSTRLISDpvLLVGTTIQYTCNPGFVLEGSSLLTCYSRETGTPIWTSRLPHCvseESLACDNPGLPENGYQILYKRLY 885
Cdd:PHA02927    92 IDNGQLDIGG--VDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPIC---ESVKCQSPPSISNGRHNGYEDFY 166

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1622838765  886 LPGESLTFMCYEGFELMGEVTIRCILGQpshWNGPlPVCKVAEAAAETSLEG 937
Cdd:PHA02927   167 TDGSVVTYSCNSGYSLIGNSGVLCSGGE---WSDP-PTCQIVKCPHPTISNG 214
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 275-382 2.01e-09

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


:

Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 56.27  E-value: 2.01e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  275 CSVSFSNP-EGYIDSSDYPPLPLNNfLECTYNVTVYTGYGVELQVKSVNLSEGEL-----LSIRGVDGPTLTVLANQTLL 348
Cdd:cd00041      1 CGGTLTAStSGTISSPNYPNNYPNN-LNCVWTIEAPPGYRIRLTFEDFDLESSPNcsydyLEIYDGPSTSSPLLGRFCGS 79

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1622838765  349 VEGQVIRSPTNTISVYFRTFQDDGLGTFQLHYQA 382
Cdd:cd00041     80 TLPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA 113
Sushi pfam00084
Sushi repeat (SCR repeat);
561-618 5.35e-09

Sushi repeat (SCR repeat);


:

Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 5.35e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  561 CYEP-YIQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECINvrDPYWNDTEPLC 618
Cdd:pfam00084    1 CPPPpDIPNGKVSATKNEYNYGASVSYECDPGYRL-VGSPTITCQE--DGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 387-442 2.47e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


:

Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 45.60  E-value: 2.47e-06
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622838765   387 CNFPRRPDSGDVTVM--DLHSGGVAHFHCHLGYELQGAKMLTCINASKphWSSQEPIC 442
Cdd:smart00032    1 CPPPPDIENGTVTSSsgTYSYGDTVTYSCDPGYTLIGSSTITCLENGT--WSPPPPTC 56
PBP1 super family cl34930
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ...
 1-234 1.16e-03

PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];


The actual alignment was detected with superfamily member COG5180:

Pssm-ID: 444064 [Multi-domain]  Cd Length: 548  Bit Score: 42.74  E-value: 1.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765    1 MPAARPPAAGLGGISLFLALLLGSPAA---ALERDALP--EGPYLLPS---------GALERGSPGKEHPEERLVTAPPS 66
Cdd:COG5180    111 PAAKTPELAAGALPAPAAAAALPKAKVtreATSASAGValAAALLQRSdpilakdpdGDSASTLPPPAEKLDKVLTEPRD 190

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   67 SSQSGEVLGELELDGTVPSAHHDTPALSPLlPEEARPKHALPSKKKPPSL------KQVNSARKQLRPKATSAATVQRAG 140
Cdd:COG5180    191 ALKDSPEKLDRPKVEVKDEAQEEPPDLTGG-ADHPRPEAASSPKVDPPSTsearsrPATVDAQPEMRPPADAKERRRAAI 269

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  141 SQPASQ---GLGLLSSSTEKPgppgdpdpimASEEASEVPLWLDRKESA-VPTTPAPLQISPFTSQPyMAHTLPQRSESG 216
Cdd:COG5180    270 GDTPAAeppGLPVLEAGSEPQ----------SDAPEAETARPIDVKGVAsAPPATRPVRPPGGARDP-GTPRPGQPTERP 338

                          250
                   ....*....|....*...
gi 1622838765  217 EPGPDMAQEAPQEDTSPM 234
Cdd:COG5180    339 AGVPEAASDAGQPPSAYP 356
 
Name Accession Description Interval E-value
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 622-730 1.41e-25

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 102.11  E-value: 1.41e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  622 CGGELSA-VAGVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNS 695
Cdd:cd00041      1 CGGTLTAsTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSpncsyDYLEIYDGPSTSSPLLGRFCGST 80

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  696 GPQKLYSSTPDLTIQFHSDPAglifGKGQGFIMNY 730
Cdd:cd00041     81 LPPPIISSGNSLTVRFRSDSS----VTGRGFKATY 111
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 446-555 1.17e-21

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 90.93  E-value: 1.17e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  446 CGGTVHNATIGRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSLH-----DKDRMTVHSGQTNKSALLyDSLQTE 520
Cdd:cd00041      1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLEsspncSYDYLEIYDGPSTSSPLL-GRFCGS 79

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  521 SVPFEgLLSEGDTIRIEFTSDQARAASTFNIRFEA 555
Cdd:cd00041     80 TLPPP-IISSGNSLTVRFRSDSSVTGRGFKATYSA 113
CUB smart00042
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ...
 631-730 1.51e-18

Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.


Pssm-ID: 214483 [Multi-domain]  Cd Length: 102  Bit Score: 81.67  E-value: 1.51e-18
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   631 GVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNSGPQKLYSS-T 704
Cdd:smart00042    1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSdnceyDYVEIYDGPSASSPLLGRFCGSEAPPPVISSsS 80

                            90       100
                    ....*....|....*....|....*.
gi 1622838765   705 PDLTIQFHSDPAglifGKGQGFIMNY 730
Cdd:smart00042   81 NSLTLTFVSDSS----VQKRGFSARY 102
CUB pfam00431
CUB domain;
622-717 5.95e-18

CUB domain;


Pssm-ID: 395345 [Multi-domain]  Cd Length: 110  Bit Score: 80.42  E-value: 5.95e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  622 CGGELSAVAGVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNSG 696
Cdd:pfam00431    1 CGGVLTDSSGSISSPNYPNPYPPNKDCVWLIRAPPGFRVKLTFQDFELEDHdecgyDYVEIRDGPSASSPLLGRFCGSGI 80

                           90       100
                   ....*....|....*....|.
gi 1622838765  697 PQKLYSSTPDLTIQFHSDPAG 717
Cdd:pfam00431   81 PEDIVSSSNQMTIKFVSDASV 101
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 738-937 2.64e-14

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 74.30  E-value: 2.64e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  738 SCSDLP------EIQNGWKTTSHTELVRGARITYQCDPGY--DIVGSDTLTCQ---WDLswssdppFCEKIMY-CTDPGE 805
Cdd:PHA02927    19 SCCTIPsrpinmKFKNSVETDANANYNIGDTIEYLCLPGYrkQKMGPIYAKCTgtgWTL-------FNQCIKRrCPSPRD 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  806 VDHSTRLISDpvLLVGTTIQYTCNPGFVLEGSSLLTCYSRETGTPIWTSRLPHCvseESLACDNPGLPENGYQILYKRLY 885
Cdd:PHA02927    92 IDNGQLDIGG--VDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPIC---ESVKCQSPPSISNGRHNGYEDFY 166

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1622838765  886 LPGESLTFMCYEGFELMGEVTIRCILGQpshWNGPlPVCKVAEAAAETSLEG 937
Cdd:PHA02927   167 TDGSVVTYSCNSGYSLIGNSGVLCSGGE---WSDP-PTCQIVKCPHPTISNG 214
CUB smart00042
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ...
 456-553 1.46e-13

Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.


Pssm-ID: 214483 [Multi-domain]  Cd Length: 102  Bit Score: 67.42  E-value: 1.46e-13
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   456 GRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSL--HD---KDRMTVHSGQTNKSALL--YDSLQTESVPFEgll 528
Cdd:smart00042    1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLesSDnceYDYVEIYDGPSASSPLLgrFCGSEAPPPVIS--- 77

                            90       100
                    ....*....|....*....|....*
gi 1622838765   529 SEGDTIRIEFTSDQARAASTFNIRF 553
Cdd:smart00042   78 SSSNSLTLTFVSDSSVQKRGFSARY 102
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 739-795 1.80e-13

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 65.95  E-value: 1.80e-13
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622838765  739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCE 795
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 739-794 2.20e-13

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 65.63  E-value: 2.20e-13
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622838765   739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFC 794
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CUB pfam00431
CUB domain;
446-553 9.25e-13

CUB domain;


Pssm-ID: 395345 [Multi-domain]  Cd Length: 110  Bit Score: 65.39  E-value: 9.25e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  446 CGGTVHNATiGRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSLHD-----KDRMTVHSGQTNKSALL--Ydslq 518
Cdd:pfam00431    1 CGGVLTDSS-GSISSPNYPNPYPPNKDCVWLIRAPPGFRVKLTFQDFELEDhdecgYDYVEIRDGPSASSPLLgrF---- 75

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  519 TESVPFEGLLSEGDTIRIEFTSDQARAASTFNIRF 553
Cdd:pfam00431   76 CGSGIPEDIVSSSNQMTIKFVSDASVQKRGFKATY 110
Sushi pfam00084
Sushi repeat (SCR repeat);
739-794 2.25e-12

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 62.52  E-value: 2.25e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622838765  739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFC 794
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 275-382 2.01e-09

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 56.27  E-value: 2.01e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  275 CSVSFSNP-EGYIDSSDYPPLPLNNfLECTYNVTVYTGYGVELQVKSVNLSEGEL-----LSIRGVDGPTLTVLANQTLL 348
Cdd:cd00041      1 CGGTLTAStSGTISSPNYPNNYPNN-LNCVWTIEAPPGYRIRLTFEDFDLESSPNcsydyLEIYDGPSTSSPLLGRFCGS 79

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1622838765  349 VEGQVIRSPTNTISVYFRTFQDDGLGTFQLHYQA 382
Cdd:cd00041     80 TLPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA 113
Sushi pfam00084
Sushi repeat (SCR repeat);
561-618 5.35e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 5.35e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  561 CYEP-YIQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECINvrDPYWNDTEPLC 618
Cdd:pfam00084    1 CPPPpDIPNGKVSATKNEYNYGASVSYECDPGYRL-VGSPTITCQE--DGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 564-618 1.48e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 51.76  E-value: 1.48e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 1622838765   564 PYIQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECINvrDPYWNDTEPLC 618
Cdd:smart00032    5 PDIENGTVTSSSGTYSYGDTVTYSCDPGYTL-IGSSTITCLE--NGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 561-619 4.32e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 50.54  E-value: 4.32e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622838765  561 CYEPY-IQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECI-NVRdpyWNDTEPLCR 619
Cdd:cd00033      1 CPPPPvPENGTVTGSKGSYSYGSTVTYSCNEGYTL-VGSSTITCTeNGG---WSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 387-442 2.47e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 45.60  E-value: 2.47e-06
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622838765   387 CNFPRRPDSGDVTVM--DLHSGGVAHFHCHLGYELQGAKMLTCINASKphWSSQEPIC 442
Cdd:smart00032    1 CPPPPDIENGTVTSSsgTYSYGDTVTYSCDPGYTLIGSSTITCLENGT--WSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 387-442 3.97e-06

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 45.15  E-value: 3.97e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622838765  387 CNFPRRPDSGDVTVM--DLHSGGVAHFHCHLGYELQGAKMLTCInaSKPHWSSQEPIC 442
Cdd:cd00033      1 CPPPPVPENGTVTGSkgSYSYGSTVTYSCNEGYTLVGSSTITCT--ENGGWSPPPPTC 56
CUB smart00042
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ...
 284-380 7.60e-05

Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.


Pssm-ID: 214483 [Multi-domain]  Cd Length: 102  Bit Score: 42.76  E-value: 7.60e-05
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   284 GYIDSSDYPPLPLNNfLECTYNVTVYTGYGVELQVKSVNLSEGEL-----LSIRgvDGPTLTVLANQTL---LVEGQVIR 355
Cdd:smart00042    1 GTITSPNYPQSYPNN-LDCVWTIRAPPGYRIELQFTDFDLESSDNceydyVEIY--DGPSASSPLLGRFcgsEAPPPVIS 77

                            90       100
                    ....*....|....*....|....*
gi 1622838765   356 SPTNTISVYFRTFQDDGLGTFQLHY 380
Cdd:smart00042   78 SSSNSLTLTFVSDSSVQKRGFSARY 102
PBP1 COG5180
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ...
 1-234 1.16e-03

PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];


Pssm-ID: 444064 [Multi-domain]  Cd Length: 548  Bit Score: 42.74  E-value: 1.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765    1 MPAARPPAAGLGGISLFLALLLGSPAA---ALERDALP--EGPYLLPS---------GALERGSPGKEHPEERLVTAPPS 66
Cdd:COG5180    111 PAAKTPELAAGALPAPAAAAALPKAKVtreATSASAGValAAALLQRSdpilakdpdGDSASTLPPPAEKLDKVLTEPRD 190

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   67 SSQSGEVLGELELDGTVPSAHHDTPALSPLlPEEARPKHALPSKKKPPSL------KQVNSARKQLRPKATSAATVQRAG 140
Cdd:COG5180    191 ALKDSPEKLDRPKVEVKDEAQEEPPDLTGG-ADHPRPEAASSPKVDPPSTsearsrPATVDAQPEMRPPADAKERRRAAI 269

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  141 SQPASQ---GLGLLSSSTEKPgppgdpdpimASEEASEVPLWLDRKESA-VPTTPAPLQISPFTSQPyMAHTLPQRSESG 216
Cdd:COG5180    270 GDTPAAeppGLPVLEAGSEPQ----------SDAPEAETARPIDVKGVAsAPPATRPVRPPGGARDP-GTPRPGQPTERP 338

                          250
                   ....*....|....*...
gi 1622838765  217 EPGPDMAQEAPQEDTSPM 234
Cdd:COG5180    339 AGVPEAASDAGQPPSAYP 356
PHA03247 PHA03247
large tegument protein UL36; Provisional
 6-233 4.23e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 4.23e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765    6 PPAAGLGGISLFLALLLGSPAAALERDALPEGPYLLPSGALERGSPGKEHPEERlVTAPPSSSQSGEVLGELELDGTVPS 85
Cdd:PHA03247  2722 PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAP-AAGPPRRLTRPAVASLSESRESLPS 2800

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   86 AHHDTPALSPLL-PEEARPKHALPSKKKPPSlkqvnsarkqlrPKATSAATVQRAGSQPASQGLGLLSSSTEKPGPPGDP 164
Cdd:PHA03247  2801 PWDPADPPAAVLaPAAALPPAASPAGPLPPP------------TSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPS 2868

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  165 DPIMASEEASEVPLWLDRKESAVPTTPAPLQISPFTSQPYMAHTLPQRSESGEPGPDMAQEAPQEDTSP 233
Cdd:PHA03247  2869 RSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937
 
Name Accession Description Interval E-value
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 622-730 1.41e-25

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 102.11  E-value: 1.41e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  622 CGGELSA-VAGVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNS 695
Cdd:cd00041      1 CGGTLTAsTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSpncsyDYLEIYDGPSTSSPLLGRFCGST 80

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  696 GPQKLYSSTPDLTIQFHSDPAglifGKGQGFIMNY 730
Cdd:cd00041     81 LPPPIISSGNSLTVRFRSDSS----VTGRGFKATY 111
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 446-555 1.17e-21

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 90.93  E-value: 1.17e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  446 CGGTVHNATIGRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSLH-----DKDRMTVHSGQTNKSALLyDSLQTE 520
Cdd:cd00041      1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLEsspncSYDYLEIYDGPSTSSPLL-GRFCGS 79

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  521 SVPFEgLLSEGDTIRIEFTSDQARAASTFNIRFEA 555
Cdd:cd00041     80 TLPPP-IISSGNSLTVRFRSDSSVTGRGFKATYSA 113
CUB smart00042
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ...
 631-730 1.51e-18

Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.


Pssm-ID: 214483 [Multi-domain]  Cd Length: 102  Bit Score: 81.67  E-value: 1.51e-18
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   631 GVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNSGPQKLYSS-T 704
Cdd:smart00042    1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSdnceyDYVEIYDGPSASSPLLGRFCGSEAPPPVISSsS 80

                            90       100
                    ....*....|....*....|....*.
gi 1622838765   705 PDLTIQFHSDPAglifGKGQGFIMNY 730
Cdd:smart00042   81 NSLTLTFVSDSS----VQKRGFSARY 102
CUB pfam00431
CUB domain;
622-717 5.95e-18

CUB domain;


Pssm-ID: 395345 [Multi-domain]  Cd Length: 110  Bit Score: 80.42  E-value: 5.95e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  622 CGGELSAVAGVVLSPNWPEPYMEGEDCIWKIHVGEEKRIFLDIQFLNLSNS-----DILTIYDGDEVMPHILGQYLGNSG 696
Cdd:pfam00431    1 CGGVLTDSSGSISSPNYPNPYPPNKDCVWLIRAPPGFRVKLTFQDFELEDHdecgyDYVEIRDGPSASSPLLGRFCGSGI 80

                           90       100
                   ....*....|....*....|.
gi 1622838765  697 PQKLYSSTPDLTIQFHSDPAG 717
Cdd:pfam00431   81 PEDIVSSSNQMTIKFVSDASV 101
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 738-937 2.64e-14

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 74.30  E-value: 2.64e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  738 SCSDLP------EIQNGWKTTSHTELVRGARITYQCDPGY--DIVGSDTLTCQ---WDLswssdppFCEKIMY-CTDPGE 805
Cdd:PHA02927    19 SCCTIPsrpinmKFKNSVETDANANYNIGDTIEYLCLPGYrkQKMGPIYAKCTgtgWTL-------FNQCIKRrCPSPRD 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  806 VDHSTRLISDpvLLVGTTIQYTCNPGFVLEGSSLLTCYSRETGTPIWTSRLPHCvseESLACDNPGLPENGYQILYKRLY 885
Cdd:PHA02927    92 IDNGQLDIGG--VDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPIC---ESVKCQSPPSISNGRHNGYEDFY 166

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1622838765  886 LPGESLTFMCYEGFELMGEVTIRCILGQpshWNGPlPVCKVAEAAAETSLEG 937
Cdd:PHA02927   167 TDGSVVTYSCNSGYSLIGNSGVLCSGGE---WSDP-PTCQIVKCPHPTISNG 214
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 739-924 3.95e-14

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 73.53  E-value: 3.95e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  739 CSDLPEIQNGWKTTSHTELvrGARITYQCDPGYDIVGSDTLTCQW----DLSWSSDPPFCEKIMyCTDPGEVDHSTRLIS 814
Cdd:PHA02927    86 CPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYQLIGESKSYCELgstgSMVWNPEAPICESVK-CQSPPSISNGRHNGY 162

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  815 DPVLLVGTTIQYTCNPGFVLEGSSLLTCYSRETGTPiwtsrlPHCvseESLACDNPGLpENGY-QILYKRLYLPGESLTF 893
Cdd:PHA02927   163 EDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDP------PTC---QIVKCPHPTI-SNGYlSSGFKRSYSYNDNVDF 232

                          170       180       190
                   ....*....|....*....|....*....|.
gi 1622838765  894 MCYEGFELMGEVTIRCILGQPshWNGPLPVC 924
Cdd:PHA02927   233 KCKYGYKLSGSSSSTCSPGNT--WQPELPKC 261
CUB smart00042
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ...
 456-553 1.46e-13

Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.


Pssm-ID: 214483 [Multi-domain]  Cd Length: 102  Bit Score: 67.42  E-value: 1.46e-13
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   456 GRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSL--HD---KDRMTVHSGQTNKSALL--YDSLQTESVPFEgll 528
Cdd:smart00042    1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLesSDnceYDYVEIYDGPSASSPLLgrFCGSEAPPPVIS--- 77

                            90       100
                    ....*....|....*....|....*
gi 1622838765   529 SEGDTIRIEFTSDQARAASTFNIRF 553
Cdd:smart00042   78 SSSNSLTLTFVSDSSVQKRGFSARY 102
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 739-795 1.80e-13

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 65.95  E-value: 1.80e-13
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622838765  739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCE 795
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 739-794 2.20e-13

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 65.63  E-value: 2.20e-13
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622838765   739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFC 794
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CUB pfam00431
CUB domain;
446-553 9.25e-13

CUB domain;


Pssm-ID: 395345 [Multi-domain]  Cd Length: 110  Bit Score: 65.39  E-value: 9.25e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  446 CGGTVHNATiGRVLSPSYPGNTNGSQFCVWTIEAPEGQKLHLHFERLSLHD-----KDRMTVHSGQTNKSALL--Ydslq 518
Cdd:pfam00431    1 CGGVLTDSS-GSISSPNYPNPYPPNKDCVWLIRAPPGFRVKLTFQDFELEDhdecgYDYVEIRDGPSASSPLLgrF---- 75

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622838765  519 TESVPFEGLLSEGDTIRIEFTSDQARAASTFNIRF 553
Cdd:pfam00431   76 CGSGIPEDIVSSSNQMTIKFVSDASVQKRGFKATY 110
Sushi pfam00084
Sushi repeat (SCR repeat);
739-794 2.25e-12

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 62.52  E-value: 2.25e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622838765  739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFC 794
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 867-925 1.23e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 60.55  E-value: 1.23e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  867 CDNPGLPENGYQILYKRLYLPGESLTFMCYEGFELMGEVTIRCILGqpSHWNGPLPVCK 925
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTEN--GGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 867-924 9.99e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 57.92  E-value: 9.99e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622838765   867 CDNPGLPENGYQILYKRLYLPGESLTFMCYEGFELMGEVTIRCILGqpSHWNGPLPVC 924
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLEN--GTWSPPPPTC 56
PHA02639 PHA02639
EEV host range protein; Provisional
 730-924 2.40e-10

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 62.76  E-value: 2.40e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  730 YIEVSRNDSCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLS---WSSDPPFCeKIMYCTDPGEV 806
Cdd:PHA02639    13 YVHGVKSIYCDKPDDISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNnaiWSNKAPFC-MLKECNDPPSI 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  807 DHSTRLISDPVLLVGTTIQYTCNP----GFVLEGSSLLTCYSRETgtpiWTSRLPHCvseESLACDNPGLpENGY--QIL 880
Cdd:PHA02639    92 INGKIYNKREMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKS----WKPDPPIC---KMINCRFPAL-QNGYinGIP 163

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1622838765  881 YKRLYLPGESLTFMCYEGFELMGEVTIRCILGqpSHWNGPLPVC 924
Cdd:PHA02639   164 SNKKFYYKTRVGFSCKSGFDLVGEKYSTCNIN--ATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 739-865 1.07e-09

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 60.83  E-value: 1.07e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  739 CSDLPEIQNGwKTTSHTELVR-GARITYQCDP----GYDIVGSDTLTCQWDLSWSSDPPFCeKIMYCTDPG-EVDHSTRL 812
Cdd:PHA02639    85 CNDPPSIING-KIYNKREMYKvGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPIC-KMINCRFPAlQNGYINGI 162

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1622838765  813 ISDPVLLVGTTIQYTCNPGFVLEGSSLLTCYSRETgtpiWTSRLPHCVSEESL 865
Cdd:PHA02639   163 PSNKKFYYKTRVGFSCKSGFDLVGEKYSTCNINAT----WFPSIPTCVRNKPI 211
PHA02817 PHA02817
EEV Host range protein; Provisional
 737-860 1.37e-09

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 59.57  E-value: 1.37e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  737 DSCSDLPEIQNGWKTTSHTELVRGARITYQCDPG-----YDIVGSDTLTCQWDLSWSSDPPFCEkIMYCTDPGEVDHSTR 811
Cdd:PHA02817    22 NKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCK-IIRCRFPALQNGFVN 100

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1622838765  812 LISD-PVLLVGTTIQYTCNPGFVLEGSSLLTCYSRETgtpiWTSRLPHCV 860
Cdd:PHA02817   101 GIPDsKKFYYESEVSFSCKPGFVLIGTKYSVCGINSS----WIPKVPICS 146
PHA02639 PHA02639
EEV host range protein; Provisional
 796-926 1.57e-09

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 60.45  E-value: 1.57e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  796 KIMYCTDPGEVDHS--TRLISDpvLLVGTTIQYTCNPGFVLEGSSLLTCYsRETGTPIWTSRLPHCVSEEslaCDNPGLP 873
Cdd:PHA02639    18 KSIYCDKPDDISNGfiTELMEK--YEIGKLIEYTCNTDYALIGDRFRTCI-KDKNNAIWSNKAPFCMLKE---CNDPPSI 91

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622838765  874 ENGYQILYKRLYLPGESLTFMCYE----GFELMGEVTIRCIlgQPSHWNGPLPVCKV 926
Cdd:PHA02639    92 INGKIYNKREMYKVGDEIYYVCNEhkgvQYSLVGNEKITCI--QDKSWKPDPPICKM 146
CUB cd00041
CUB domain; extracellular domain; present in proteins mostly known to be involved in ...
 275-382 2.01e-09

CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.


Pssm-ID: 238001 [Multi-domain]  Cd Length: 113  Bit Score: 56.27  E-value: 2.01e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  275 CSVSFSNP-EGYIDSSDYPPLPLNNfLECTYNVTVYTGYGVELQVKSVNLSEGEL-----LSIRGVDGPTLTVLANQTLL 348
Cdd:cd00041      1 CGGTLTAStSGTISSPNYPNNYPNN-LNCVWTIEAPPGYRIRLTFEDFDLESSPNcsydyLEIYDGPSTSSPLLGRFCGS 79

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1622838765  349 VEGQVIRSPTNTISVYFRTFQDDGLGTFQLHYQA 382
Cdd:cd00041     80 TLPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA 113
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 800-859 3.25e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 53.68  E-value: 3.25e-09
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   800 CTDPGEVDHSTRLISDPVLLVGTTIQYTCNPGFVLEGSSLLTCysRETGTpiWTSRLPHC 859
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITC--LENGT--WSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 800-860 3.29e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.62  E-value: 3.29e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622838765  800 CTDPGEVDHSTRLISDPVLLVGTTIQYTCNPGFVLEGSSLLTCysreTGTPIWTSRLPHCV 860
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITC----TENGGWSPPPPTCE 57
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 739-860 3.95e-09

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 58.51  E-value: 3.95e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  739 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTC---QWdlswsSDPPFCEkIMYCTDPGevdhstrlISD 815
Cdd:PHA02927   148 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCsggEW-----SDPPTCQ-IVKCPHPT--------ISN 213

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1622838765  816 PVLLVG--------TTIQYTCNPGFVLEGSSLLTCYSRETgtpiWTSRLPHCV 860
Cdd:PHA02927   214 GYLSSGfkrsysynDNVDFKCKYGYKLSGSSSSTCSPGNT----WQPELPKCV 262
Sushi pfam00084
Sushi repeat (SCR repeat);
561-618 5.35e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 5.35e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  561 CYEP-YIQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECINvrDPYWNDTEPLC 618
Cdd:pfam00084    1 CPPPpDIPNGKVSATKNEYNYGASVSYECDPGYRL-VGSPTITCQE--DGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 564-618 1.48e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 51.76  E-value: 1.48e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 1622838765   564 PYIQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECINvrDPYWNDTEPLC 618
Cdd:smart00032    5 PDIENGTVTSSSGTYSYGDTVTYSCDPGYTL-IGSSTITCLE--NGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 561-619 4.32e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 50.54  E-value: 4.32e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622838765  561 CYEPY-IQNGNFTTSDPTYNIGTIVEFTCDPGHSLeQGPAIIECI-NVRdpyWNDTEPLCR 619
Cdd:cd00033      1 CPPPPvPENGTVTGSKGSYSYGSTVTYSCNEGYTL-VGSSTITCTeNGG---WSPPPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
800-859 1.05e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 49.42  E-value: 1.05e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  800 CTDPGEVDHSTRLISDPVLLVGTTIQYTCNPGFVLEGSSLLTCysRETGTpiWTSRLPHC 859
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITC--QEDGT--WSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
867-924 1.45e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 49.03  E-value: 1.45e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  867 CDNPGLPENGYQILYKRLYLPGESLTFMCYEGFELMGEVTIRCIL-GQpshWNGPLPVC 924
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGT---WSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 387-442 2.47e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 45.60  E-value: 2.47e-06
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622838765   387 CNFPRRPDSGDVTVM--DLHSGGVAHFHCHLGYELQGAKMLTCINASKphWSSQEPIC 442
Cdd:smart00032    1 CPPPPDIENGTVTSSsgTYSYGDTVTYSCDPGYTLIGSSTITCLENGT--WSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 387-442 3.97e-06

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 45.15  E-value: 3.97e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622838765  387 CNFPRRPDSGDVTVM--DLHSGGVAHFHCHLGYELQGAKMLTCInaSKPHWSSQEPIC 442
Cdd:cd00033      1 CPPPPVPENGTVTGSkgSYSYGSTVTYSCNEGYTLVGSSTITCT--ENGGWSPPPPTC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 760-860 4.51e-06

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 49.70  E-value: 4.51e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  760 GARITYQCDPGYDIVGSDTLTCQWDlSWSSDPPFCEKimyCTDPgevDHSTRLISDPVLLVGTTIQYTCNPGFVLEGSSL 839
Cdd:PHA02954   150 GEHITINCDVGYEVIGASYISCTAN-SWNVIPSCQQK---CDIP---SLSNGLISGSTFSIGGVIHLSCKSGFTLTGSPS 222

                           90       100
                   ....*....|....*....|.
gi 1622838765  840 LTCYSREtgtpiWTSRLPHCV 860
Cdd:PHA02954   223 STCIDGK-----WNPVLPICV 238
CUB smart00042
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ...
 284-380 7.60e-05

Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.


Pssm-ID: 214483 [Multi-domain]  Cd Length: 102  Bit Score: 42.76  E-value: 7.60e-05
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   284 GYIDSSDYPPLPLNNfLECTYNVTVYTGYGVELQVKSVNLSEGEL-----LSIRgvDGPTLTVLANQTL---LVEGQVIR 355
Cdd:smart00042    1 GTITSPNYPQSYPNN-LDCVWTIRAPPGYRIELQFTDFDLESSDNceydyVEIY--DGPSASSPLLGRFcgsEAPPPVIS 77

                            90       100
                    ....*....|....*....|....*
gi 1622838765   356 SPTNTISVYFRTFQDDGLGTFQLHY 380
Cdd:smart00042   78 SSSNSLTLTFVSDSSVQKRGFSARY 102
PHA02831 PHA02831
EEV host range protein; Provisional
 762-924 1.80e-04

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 44.60  E-value: 1.80e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  762 RITYQCDPGYDIVgsdTLTCQwDLSWSSDPpFCEKIMYCTDP-----GEVDHSTRLISdpvllVGTTIQYTCNPG----F 832
Cdd:PHA02831    45 NLEYKCNNNFDKV---FVTCN-NGSWSTKN-MCIGKRNCKDPvtilnGYIKNKKDQYS-----FGDSVTYACKVNklekY 114

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  833 VLEGSSLLTCYSREtgtpiWTSRLPHCvseESLACDNPGLpENGYQILYKRLYLPGESLTFMCYEGFELMGEVTIRCilG 912
Cdd:PHA02831   115 SIVGNETVKCINKQ-----WVPKYPVC---KLIRCKYPAL-QNGFLNVFEKKFYYGDIVNFKCKKGFILLGSSVSTC--D 183

                          170
                   ....*....|..
gi 1622838765  913 QPSHWNGPLPVC 924
Cdd:PHA02831   184 INSIWYPGIPKC 195
PBP1 COG5180
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ...
 1-234 1.16e-03

PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];


Pssm-ID: 444064 [Multi-domain]  Cd Length: 548  Bit Score: 42.74  E-value: 1.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765    1 MPAARPPAAGLGGISLFLALLLGSPAA---ALERDALP--EGPYLLPS---------GALERGSPGKEHPEERLVTAPPS 66
Cdd:COG5180    111 PAAKTPELAAGALPAPAAAAALPKAKVtreATSASAGValAAALLQRSdpilakdpdGDSASTLPPPAEKLDKVLTEPRD 190

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   67 SSQSGEVLGELELDGTVPSAHHDTPALSPLlPEEARPKHALPSKKKPPSL------KQVNSARKQLRPKATSAATVQRAG 140
Cdd:COG5180    191 ALKDSPEKLDRPKVEVKDEAQEEPPDLTGG-ADHPRPEAASSPKVDPPSTsearsrPATVDAQPEMRPPADAKERRRAAI 269

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  141 SQPASQ---GLGLLSSSTEKPgppgdpdpimASEEASEVPLWLDRKESA-VPTTPAPLQISPFTSQPyMAHTLPQRSESG 216
Cdd:COG5180    270 GDTPAAeppGLPVLEAGSEPQ----------SDAPEAETARPIDVKGVAsAPPATRPVRPPGGARDP-GTPRPGQPTERP 338

                          250
                   ....*....|....*...
gi 1622838765  217 EPGPDMAQEAPQEDTSPM 234
Cdd:COG5180    339 AGVPEAASDAGQPPSAYP 356
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 738-925 1.41e-03

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 42.00  E-value: 1.41e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  738 SCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLtCQWDlSWSSDPPfCEKImyCTDPgevDHSTRLISDPV 817
Cdd:PHA02954    19 STCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYSLDPNAV-CETD-KWKYENP-CKKM--CTVS---DYVSELYDKPL 90

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765  818 LLVGTTIQYTCNpgfvlEGSSLLTCySRETGTPIWTSRLPhCVSEEslaCDNPGLPENGYQILyKRLYLPGESLTFMCYE 897
Cdd:PHA02954    91 YEVNSTITLICK-----DETKYFRC-EEKNGNTSWNDTVT-CPNAE---CQPLQLEHGSCQPV-KEKYSFGEHITINCDV 159

                          170       180
                   ....*....|....*....|....*...
gi 1622838765  898 GFELMGEVTIRCilgQPSHWNgPLPVCK 925
Cdd:PHA02954   160 GYEVIGASYISC---TANSWN-VIPSCQ 183
PHA03247 PHA03247
large tegument protein UL36; Provisional
 6-233 4.23e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 4.23e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765    6 PPAAGLGGISLFLALLLGSPAAALERDALPEGPYLLPSGALERGSPGKEHPEERlVTAPPSSSQSGEVLGELELDGTVPS 85
Cdd:PHA03247  2722 PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAP-AAGPPRRLTRPAVASLSESRESLPS 2800

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622838765   86 AHHDTPALSPLL-PEEARPKHALPSKKKPPSlkqvnsarkqlrPKATSAATVQRAGSQPASQGLGLLSSSTEKPGPPGDP 164
Cdd:PHA03247  2801 PWDPADPPAAVLaPAAALPPAASPAGPLPPP------------TSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPS 2868

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622838765  165 DPIMASEEASEVPLWLDRKESAVPTTPAPLQISPFTSQPYMAHTLPQRSESGEPGPDMAQEAPQEDTSP 233
Cdd:PHA03247  2869 RSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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