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Conserved domains on  [gi|1622966771|ref|XP_028682550|]
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ligand-dependent corepressor isoform X4 [Macaca mulatta]

Protein Classification

DUF4553 domain-containing protein( domain architecture ID 12172005)

DUF4553 domain-containing protein similar to Homo sapiens protein ENSP00000382790

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
DUF4553 pfam15090
Domain of unknown function (DUF4553); This family of proteins is functionally uncharacterized. ...
 1219-1680 0e+00

Domain of unknown function (DUF4553); This family of proteins is functionally uncharacterized. This family of proteins is found in vertebrates. This family includes the human protein C10orf12.


:

Pssm-ID: 464496 [Multi-domain]  Cd Length: 477  Bit Score: 675.09  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1219 QPKFMEWCAEEENQELIANFNAQYMKVQKGWIQLEKEGQPTPRARNKSDKLKEIWKSKKRSRKCRGSLEGQKFSPVQMLF 1298
Cdd:pfam15090    7 KPKFVEWCAEEENQELIANFNAQYMKVQKGWIQLEKEAQPAPKAKNKSDKLKEIWKSKKRTRKCRGALEVQKLSPVQMLF 86

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1299 MTNFKLSNVCKWFLETTETRSLVIVKKLNTRLPGDVPPVKHPLQKYSPSSLYPSSLQAERLKKHLKKFPGATPARNNWKT 1378
Cdd:pfam15090   87 MKAFKLSNICKWFLETTETRSLVIVKKLNTRLPGDVPPTKHPLQKYSSSGLYPSSLQAERLKKHLKKFAVATPAKNNWKT 166

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1379 QKLWAKFRENPDQVEPEDGSDVSPSPNSEDSIEEVKEDKNSHPPANLPTPASTRILRKYSNIRGKLRAQQRLIKNEKME- 1457
Cdd:pfam15090  167 QKLWAKLRENEDKNEPEEGSDPSQSPSPEASPEELSEERWARPPESLPTPASTRILRKYSNLRGKLRAQHRIWKNEKGQd 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1458 -CPDGLAVESKPSRKSVCINPLMSPKLALQVDVDGFPVKPKSTEGMKGRKGKQVSEILPKAEVQSKRKRTEGSSP----- 1531
Cdd:pfam15090  247 sAGTSLNPEGKQSRKSVCINPLMSPKLALQVKADDFPTKSSLADGFKGRKGKQQEETLPKGEGQTSRKKEQNMESvsthn 326

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1532 ---PDGKNKGPAVKASKEKHADGVTKTPAAKRPAARDRSSQPPKKTSLKENKVkiPKKSAGKSCPPSRKEKENTNKRPSQ 1608
Cdd:pfam15090  327 wrsSSSKDKIPAKKASKLKHRNTFKKSPATRKPAAVDRSSKLAKKMSEKERKV--PKKHPGKSNPPVRKGKENTNKKANP 404

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622966771 1609 SIASETLTKPAKQKGASESSSRPQKA-TNRKQSSGKTRARPSTKTPESSAAQRKRKLKAKLDSSHGKRRRLDA 1680
Cdd:pfam15090  405 PAASERLTKPLKQKHLGESSSRPQKAdHSKKLSKGKTRTRSVKKTQENSAAQRKRKLRAKLDSSHNKRRRLDA 477
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
 700-861 7.59e-03

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 7.59e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771  700 HEEGGGDVSPGKEPQEPEVCPtkmkPSLSSSPRSEETTASSLGWPLPAHLPEEDLPEGGPTVS----APTASGMSSEHDQ 775
Cdd:PHA03307    55 VVAGAAACDRFEPPTGPPPGP----GTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSpdppPPTPPPASPPPSP 130

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771  776 PPLA--LLDTEEMSVPQDCHPLPSTESFSGGGSEDVISRPHSPPETVSREESPQCSENQSSPVDLEPPMSLGKAED---D 850
Cdd:PHA03307   131 APDLseMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPprrS 210

                          170
                   ....*....|.
gi 1622966771  851 QSISAEVESGD 861
Cdd:PHA03307   211 SPISASASSPA 221
 
Name Accession Description Interval E-value
DUF4553 pfam15090
Domain of unknown function (DUF4553); This family of proteins is functionally uncharacterized. ...
 1219-1680 0e+00

Domain of unknown function (DUF4553); This family of proteins is functionally uncharacterized. This family of proteins is found in vertebrates. This family includes the human protein C10orf12.


Pssm-ID: 464496 [Multi-domain]  Cd Length: 477  Bit Score: 675.09  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1219 QPKFMEWCAEEENQELIANFNAQYMKVQKGWIQLEKEGQPTPRARNKSDKLKEIWKSKKRSRKCRGSLEGQKFSPVQMLF 1298
Cdd:pfam15090    7 KPKFVEWCAEEENQELIANFNAQYMKVQKGWIQLEKEAQPAPKAKNKSDKLKEIWKSKKRTRKCRGALEVQKLSPVQMLF 86

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1299 MTNFKLSNVCKWFLETTETRSLVIVKKLNTRLPGDVPPVKHPLQKYSPSSLYPSSLQAERLKKHLKKFPGATPARNNWKT 1378
Cdd:pfam15090   87 MKAFKLSNICKWFLETTETRSLVIVKKLNTRLPGDVPPTKHPLQKYSSSGLYPSSLQAERLKKHLKKFAVATPAKNNWKT 166

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1379 QKLWAKFRENPDQVEPEDGSDVSPSPNSEDSIEEVKEDKNSHPPANLPTPASTRILRKYSNIRGKLRAQQRLIKNEKME- 1457
Cdd:pfam15090  167 QKLWAKLRENEDKNEPEEGSDPSQSPSPEASPEELSEERWARPPESLPTPASTRILRKYSNLRGKLRAQHRIWKNEKGQd 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1458 -CPDGLAVESKPSRKSVCINPLMSPKLALQVDVDGFPVKPKSTEGMKGRKGKQVSEILPKAEVQSKRKRTEGSSP----- 1531
Cdd:pfam15090  247 sAGTSLNPEGKQSRKSVCINPLMSPKLALQVKADDFPTKSSLADGFKGRKGKQQEETLPKGEGQTSRKKEQNMESvsthn 326

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1532 ---PDGKNKGPAVKASKEKHADGVTKTPAAKRPAARDRSSQPPKKTSLKENKVkiPKKSAGKSCPPSRKEKENTNKRPSQ 1608
Cdd:pfam15090  327 wrsSSSKDKIPAKKASKLKHRNTFKKSPATRKPAAVDRSSKLAKKMSEKERKV--PKKHPGKSNPPVRKGKENTNKKANP 404

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622966771 1609 SIASETLTKPAKQKGASESSSRPQKA-TNRKQSSGKTRARPSTKTPESSAAQRKRKLKAKLDSSHGKRRRLDA 1680
Cdd:pfam15090  405 PAASERLTKPLKQKHLGESSSRPQKAdHSKKLSKGKTRTRSVKKTQENSAAQRKRKLRAKLDSSHNKRRRLDA 477
PTZ00121 PTZ00121
MAEBL; Provisional
 1494-1663 5.69e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 45.13  E-value: 5.69e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1494 VKPKSTEGMKG---------RKGKQVSEILPKAEVQSKRKRTEGSSPPDGKNKGPAVKASKE---------KHADGVTKT 1555
Cdd:PTZ00121  1334 AKKKAEEAKKAaeaakaeaeAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEakkkaeedkKKADELKKA 1413

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1556 PAAKRPA--ARDRSSQPPKKTSLKENKVKIPKKSAGKSCPPSRKEKENTNKRPSQSIASETLTKPAKQKGASESSSRPQK 1633
Cdd:PTZ00121  1414 AAAKKKAdeAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE 1493

                          170       180       190
                   ....*....|....*....|....*....|
gi 1622966771 1634 ATNRKQSSGKTRARPSTKTPESSAAQRKRK 1663
Cdd:PTZ00121  1494 EAKKKADEAKKAAEAKKKADEAKKAEEAKK 1523
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 700-861 7.59e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 7.59e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771  700 HEEGGGDVSPGKEPQEPEVCPtkmkPSLSSSPRSEETTASSLGWPLPAHLPEEDLPEGGPTVS----APTASGMSSEHDQ 775
Cdd:PHA03307    55 VVAGAAACDRFEPPTGPPPGP----GTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSpdppPPTPPPASPPPSP 130

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771  776 PPLA--LLDTEEMSVPQDCHPLPSTESFSGGGSEDVISRPHSPPETVSREESPQCSENQSSPVDLEPPMSLGKAED---D 850
Cdd:PHA03307   131 APDLseMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPprrS 210

                          170
                   ....*....|.
gi 1622966771  851 QSISAEVESGD 861
Cdd:PHA03307   211 SPISASASSPA 221
 
Name Accession Description Interval E-value
DUF4553 pfam15090
Domain of unknown function (DUF4553); This family of proteins is functionally uncharacterized. ...
 1219-1680 0e+00

Domain of unknown function (DUF4553); This family of proteins is functionally uncharacterized. This family of proteins is found in vertebrates. This family includes the human protein C10orf12.


Pssm-ID: 464496 [Multi-domain]  Cd Length: 477  Bit Score: 675.09  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1219 QPKFMEWCAEEENQELIANFNAQYMKVQKGWIQLEKEGQPTPRARNKSDKLKEIWKSKKRSRKCRGSLEGQKFSPVQMLF 1298
Cdd:pfam15090    7 KPKFVEWCAEEENQELIANFNAQYMKVQKGWIQLEKEAQPAPKAKNKSDKLKEIWKSKKRTRKCRGALEVQKLSPVQMLF 86

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1299 MTNFKLSNVCKWFLETTETRSLVIVKKLNTRLPGDVPPVKHPLQKYSPSSLYPSSLQAERLKKHLKKFPGATPARNNWKT 1378
Cdd:pfam15090   87 MKAFKLSNICKWFLETTETRSLVIVKKLNTRLPGDVPPTKHPLQKYSSSGLYPSSLQAERLKKHLKKFAVATPAKNNWKT 166

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1379 QKLWAKFRENPDQVEPEDGSDVSPSPNSEDSIEEVKEDKNSHPPANLPTPASTRILRKYSNIRGKLRAQQRLIKNEKME- 1457
Cdd:pfam15090  167 QKLWAKLRENEDKNEPEEGSDPSQSPSPEASPEELSEERWARPPESLPTPASTRILRKYSNLRGKLRAQHRIWKNEKGQd 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1458 -CPDGLAVESKPSRKSVCINPLMSPKLALQVDVDGFPVKPKSTEGMKGRKGKQVSEILPKAEVQSKRKRTEGSSP----- 1531
Cdd:pfam15090  247 sAGTSLNPEGKQSRKSVCINPLMSPKLALQVKADDFPTKSSLADGFKGRKGKQQEETLPKGEGQTSRKKEQNMESvsthn 326

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1532 ---PDGKNKGPAVKASKEKHADGVTKTPAAKRPAARDRSSQPPKKTSLKENKVkiPKKSAGKSCPPSRKEKENTNKRPSQ 1608
Cdd:pfam15090  327 wrsSSSKDKIPAKKASKLKHRNTFKKSPATRKPAAVDRSSKLAKKMSEKERKV--PKKHPGKSNPPVRKGKENTNKKANP 404

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622966771 1609 SIASETLTKPAKQKGASESSSRPQKA-TNRKQSSGKTRARPSTKTPESSAAQRKRKLKAKLDSSHGKRRRLDA 1680
Cdd:pfam15090  405 PAASERLTKPLKQKHLGESSSRPQKAdHSKKLSKGKTRTRSVKKTQENSAAQRKRKLRAKLDSSHNKRRRLDA 477
PTZ00121 PTZ00121
MAEBL; Provisional
 1494-1663 5.69e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 45.13  E-value: 5.69e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1494 VKPKSTEGMKG---------RKGKQVSEILPKAEVQSKRKRTEGSSPPDGKNKGPAVKASKE---------KHADGVTKT 1555
Cdd:PTZ00121  1334 AKKKAEEAKKAaeaakaeaeAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEakkkaeedkKKADELKKA 1413

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1556 PAAKRPA--ARDRSSQPPKKTSLKENKVKIPKKSAGKSCPPSRKEKENTNKRPSQSIASETLTKPAKQKGASESSSRPQK 1633
Cdd:PTZ00121  1414 AAAKKKAdeAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE 1493

                          170       180       190
                   ....*....|....*....|....*....|
gi 1622966771 1634 ATNRKQSSGKTRARPSTKTPESSAAQRKRK 1663
Cdd:PTZ00121  1494 EAKKKADEAKKAAEAKKKADEAKKAEEAKK 1523
PTZ00121 PTZ00121
MAEBL; Provisional
 1495-1681 7.63e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 44.36  E-value: 7.63e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1495 KPKSTEGMKGRKGKQVSEILPKAEV-----QSKRKRTEGSSPPDGKNKgpavKASKEKHADGVTKTPAAKRPAARDRSSQ 1569
Cdd:PTZ00121  1289 KKKADEAKKAEEKKKADEAKKKAEEakkadEAKKKAEEAKKKADAAKK----KAEEAKKAAEAAKAEAEAAADEAEAAEE 1364

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1570 PPKKTSLKENKVKIPKKSAGKSCPPSRKEKENTNKRPSQSIASETLTKPAKQKGASESSSRPQKATnRKQSSGKTRARPS 1649
Cdd:PTZ00121  1365 KAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEK-KKADEAKKKAEEA 1443

                          170       180       190
                   ....*....|....*....|....*....|...
gi 1622966771 1650 TKTPES-SAAQRKRKLKAKLDSSHGKRRRLDAK 1681
Cdd:PTZ00121  1444 KKADEAkKKAEEAKKAEEAKKKAEEAKKADEAK 1476
PTZ00121 PTZ00121
MAEBL; Provisional
 1494-1681 8.95e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 44.36  E-value: 8.95e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1494 VKPKSTEGMKGRKGKQVSEILP------KAEVQSKRKRTEGSSPPDGKNKGPAVKASKEKHADGVTKTPAAKRPAARDRS 1567
Cdd:PTZ00121  1307 AKKKAEEAKKADEAKKKAEEAKkkadaaKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK 1386

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1568 SQPPKKTSLKENKVKIPKKSAG--KSCPPSRKEKENTNKRPSQSIASETLTKPAKQ-KGASESSSRPQKAtnRKQSSGKT 1644
Cdd:PTZ00121  1387 AEEKKKADEAKKKAEEDKKKADelKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEaKKADEAKKKAEEA--KKAEEAKK 1464

                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1622966771 1645 RARPSTKTPES--SAAQRKRKLKAKLDSSHGKRRRLDAK 1681
Cdd:PTZ00121  1465 KAEEAKKADEAkkKAEEAKKADEAKKKAEEAKKKADEAK 1503
PRK13808 PRK13808
adenylate kinase; Provisional
 1542-1676 1.47e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 42.95  E-value: 1.47e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1542 KASKEKHADGVTKTPAAKRPAARDRSSQpPKKTSLKENKVKIPKKSAGKSCPPSRKEKENTNKRPSQSIASETLTKPAK- 1620
Cdd:PRK13808   196 AANAKKAAKTPAAKSGAKKASAKAKSAA-KKVSKKKAAKTAVSAKKAAKTAAKAAKKAKKTAKKALKKAAKAVKKAAKKa 274

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622966771 1621 QKGASESSSRPQKATNRKQSSGK--TRARPSTKTPESSAAQRKRKLKAKLDSSHGKRR 1676
Cdd:PRK13808   275 AKAAAKAAKGAAKATKGKAKAKKkaGKKAAAGSKAKATAKAPKRGAKGKKAKKVTKKR 332
PTZ00121 PTZ00121
MAEBL; Provisional
 1495-1663 1.93e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 43.21  E-value: 1.93e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1495 KPKSTEGMKGRKGKQVSEILPKAEvQSKRKRTEGSSPPDGKNKGPAVKASKE---KHADGVTKTPAAKRPAARDRSSQPP 1571
Cdd:PTZ00121  1371 KKKEEAKKKADAAKKKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADeakKKAEEKKKADEAKKKAEEAKKADEA 1449

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1572 KKTSLKENKVKIPKKSAgkscpPSRKEKENTNKRPSQSIASETLTKPAKQKGASESSSRpQKATNRKQSSGKTRARPSTK 1651
Cdd:PTZ00121  1450 KKKAEEAKKAEEAKKKA-----EEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAK-KAAEAKKKADEAKKAEEAKK 1523

                          170
                   ....*....|..
gi 1622966771 1652 TPESSAAQRKRK 1663
Cdd:PTZ00121  1524 ADEAKKAEEAKK 1535
PRK13808 PRK13808
adenylate kinase; Provisional
 1516-1646 2.15e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 42.18  E-value: 2.15e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1516 KAEVQSKRKRTEGSSPPDGKNKGPAVKASKEKhadgVTKTPAAKRPAARDRSSQPPKKTSLKENKvKIPKKSAGKSCPPS 1595
Cdd:PRK13808   204 KTPAAKSGAKKASAKAKSAAKKVSKKKAAKTA----VSAKKAAKTAAKAAKKAKKTAKKALKKAA-KAVKKAAKKAAKAA 278

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622966771 1596 RK-----EKENTNKRPSQSIASETLTKPAKQKGASESSSRPQKATNRKQSSgKTRA 1646
Cdd:PRK13808   279 AKaakgaAKATKGKAKAKKKAGKKAAAGSKAKATAKAPKRGAKGKKAKKVT-KKRA 333
PTZ00121 PTZ00121
MAEBL; Provisional
 1497-1675 2.34e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.82  E-value: 2.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1497 KSTEGMKGRKGKQVSEilpKAEVQSKRKRTEGSSPPDGKNKGPAVKASKE---------KHADGVTKTPAAKRPA--ARD 1565
Cdd:PTZ00121  1349 KAEAEAAADEAEAAEE---KAEAAEKKKEEAKKKADAAKKKAEEKKKADEakkkaeedkKKADELKKAAAAKKKAdeAKK 1425

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1566 RSSQPPKKTSLKENKVKIPKKSAGKSCPPSRKEKENTNKRPSQSIASETLTKPAKQ-KGASESSSRPQKATN-----RKQ 1639
Cdd:PTZ00121  1426 KAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEaKKADEAKKKAEEAKKkadeaKKA 1505

                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1622966771 1640 SSGKTRARPSTKTPESSAAQRKRKLKAKLDSSHGKR 1675
Cdd:PTZ00121  1506 AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK 1541
PRK13808 PRK13808
adenylate kinase; Provisional
 1537-1667 2.58e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 42.18  E-value: 2.58e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1537 KGPAVKASKEK---HADGVTKTPAAKRPAARDRSSQPPKKTSLKenKVKIPKKSAGKSCPPSRKEKENTNKRPSQSiASE 1613
Cdd:PRK13808   204 KTPAAKSGAKKasaKAKSAAKKVSKKKAAKTAVSAKKAAKTAAK--AAKKAKKTAKKALKKAAKAVKKAAKKAAKA-AAK 280

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1622966771 1614 TLTKPAKQKGASESSSRPQKATNRKQSSGKTRArpstKTPESSAAQRKRKLKAK 1667
Cdd:PRK13808   281 AAKGAAKATKGKAKAKKKAGKKAAAGSKAKATA----KAPKRGAKGKKAKKVTK 330
HC2 pfam07382
Histone H1-like nucleoprotein HC2; This family contains the bacterial histone H1-like ...
 1517-1678 6.42e-03

Histone H1-like nucleoprotein HC2; This family contains the bacterial histone H1-like nucleoprotein HC2 (approximately 200 residues long), which seems to be found mostly in Chlamydia. HC2 functions in DNA condensation, although it has been suggested that it also has other roles.


Pssm-ID: 369339 [Multi-domain]  Cd Length: 187  Bit Score: 39.76  E-value: 6.42e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1517 AEVQSKRKRTEGSSPPDGKNKGPAVKASKEKhadGVTKTPAAKRPAARD---RSSQPPKKTSLKENKVKIPKKSAGKSCP 1593
Cdd:pfam07382    2 LGAQKKRSSKKTAAKKAAVRKPAAKKAAAKK---TVVRKVAAKKPAARKtvaKKTVAAKKPAAKKAAKKAVAKKVVAKKP 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771 1594 PSRKE--KENTNKRPS--QSIASETLTKPAKQKGASESSSRPQKATNRKQSSGKTRARP-------------STKTPESS 1656
Cdd:pfam07382   79 VAKKAvaKKATAKKVAakKVVAKKTVAKKAAAKKPAAKKAVAKKAVARKPAAKKAVAKKaastchknhkhtaACKRVASS 158

                          170       180
                   ....*....|....*....|...
gi 1622966771 1657 AAQRKRK-LKAKLDSSHGKRRRL 1678
Cdd:pfam07382  159 SATRAACgSKSRVNPAHGWRQQL 181
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 700-861 7.59e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 7.59e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771  700 HEEGGGDVSPGKEPQEPEVCPtkmkPSLSSSPRSEETTASSLGWPLPAHLPEEDLPEGGPTVS----APTASGMSSEHDQ 775
Cdd:PHA03307    55 VVAGAAACDRFEPPTGPPPGP----GTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSpdppPPTPPPASPPPSP 130

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622966771  776 PPLA--LLDTEEMSVPQDCHPLPSTESFSGGGSEDVISRPHSPPETVSREESPQCSENQSSPVDLEPPMSLGKAED---D 850
Cdd:PHA03307   131 APDLseMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPprrS 210

                          170
                   ....*....|.
gi 1622966771  851 QSISAEVESGD 861
Cdd:PHA03307   211 SPISASASSPA 221
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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